Spg007766 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg007766
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	SWIM-type domain-containing protein
Location	scaffold4: 8591235 .. 8593236 (+)
RNA-Seq Expression	Spg007766
Synteny	Spg007766

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACTCCAATTGGGTTGCCAAGATGTATTTGGAACGGTTTAGGAGTCAACCTAATTGGTCTTTTGCTGAAATTGTTGAGGAGGTGAAAAAGGACTATCAAGTAAGAATTTCTCGAAGTCAAGCCTATAGGGCAAGGCGTAAGACAAACAAGAGGATCAACGACAGTCTTAATGAACAATATAAGATATTGTGGGATTATGCGACAGAGATTAGAAGGTCCAATGTTGGATCAACTATGAAACTTCAATGTGATAAGGCTACTGAAGATTCTCCTCCGGTGTTTAGGAGGTGTTATGTTTGTTTTAAGGCTTGCAAGGACGAGTTCTTGGCGGGTTGCAGGCCATTTATTGCCTTAGATGCTTGCATCTAAGGTCCTTGTCAAGGACAATTAATGGTTGCAGTTGGTGTTAATGGGGACGACAGTCCTATCGTGTGTGTCGTGGTTGAGGCCGAGACGAAGGATAGCTGGACATGGTTCCTCGTTTTGCTACAAACAAACACCGGATGTTTCTCGACTAAAGGATACACTTTCATCTCAGATCAACAAAAGGTACGTATTTTTTGTTCCATTTAAAATGTGTTTGGTATATTTAAGTAACTTGTAATGTTTACATTCAAATTTTCTTTTCATAGGGTTTAGTTCTGACATTTGAGGAGTTTTTTTTCCAAATGTATCTCATCGTTTCTGTGTGCGACATCTGTATGGGAATTTTCAAAAAGAATTTAAAGGGTTGGCTTTGAAGACTTTGTTCTGGAAGGCTGCTAAGTGTAACAATATGAAGGATTTTAATGATGTTATGACTGACATTAGTAGGTTAAGGGTGGGGACTTACCAATATTTGAGTGGTATTCCTAGCAAGTATTGGTCTAGGCATGCATTTCCATGTACTTCGAAGTGTGATTTCTTGCTTAATAATTTGTCGGAGTCATTTAATGCAATATTGCCAGCAAGAAACAAGCCCATAATTCAATTGTTTGAAACCATTAGGAAGTTGATAATGGTTTGGATTACAAAGAAACATGAAAAAAGTAATAGGATGGATAAGGACATTGGAAATAGAATTCTGAAGAAGCTTGAGAAGAATATAAGTATGTCTAGGAATGCAATACCTTTTTGGGCTGGAAATGACAAGTTTGAGGTGGAGTCCGGTACATCTCATTATGCTGTAGACCTTGATGTGCGAACTTGTACCTATGGGTTGTGGCAAGTAAGTGAGATTCCTTGTCCACATGCTGTGCAATGCATATATTATGTGAAAAAGAAGCCCAAAGATTTTGTTGATGATATATACAGAAAAAAAAAAAAACTAATGGACACATACTCCCATTTTCTTCTACCATTGAATGGTCATGACCTTTGGTCGAAGACAACATAAGAGTCAATTCTCCCATTAGTTATCCAAAGACCACCAGGTCGACCAAGAAAACAGAGGAAATGAGATGATGATGAAGCTGGGACTTCAAGTACAGAAATCTCTAGAAAGTTTAAATGTGGTAGATGCAGGTTGTCCGAACATAACTCTAGATCTTGCAAAGGTCCAGTGAAGAGGAGATCAAGGAAGACATCAAGTTCTACATTCATGGGATTCAATATTCCATGTGTAAGTATATTTACAAATTACCCGTGTAAGTATATTAACAATGCATCAAGTTACCGTGTTATTGTCTTGCAGGAAAATATTGGAACACATGAGTCTGCTGCAACTTCATCTGATCCACATGGAACTAGATCTGTTGCTGAGACTTCATCTTCTGTTGGGACTTCATCTGCTGCCGAGACTTCGTTTGCTGCCGAGACTCCATTTGCTACAACTCCATCTGCTAAGACTCCATCTGCTGCGACTCAAAGAAAAGGAAAAAAACGTGCGTTAGAGAAGATGTGAGAGTTAGGTCTAGGGTTTTTTTTGTTGTATTCTTTTGTACTCACAATATTAAATGTTGTGTGGTTGACTTTATCTCTATTTTTTGTGGTGGGTGTGCCTTTTAATGGCAATATGACA

mRNA sequence

ATGAACTCCAATTGGGTTGCCAAGATGTATTTGGAACGGTTTAGGAGTCAACCTAATTGGTCTTTTGCTGAAATTGTTGAGGAGGTGAAAAAGGACTATCAATGTGATTTCTTGCTTAATAATTTGTCGGAGTCATTTAATGCAATATTGCCAGCAAGAAACAAGCCCATAATTCAATTGTTTGAAACCATTAGGAAGTTGATAATGGTTTGGATTACAAAGAAACATGAAAAAAGTAATAGGATGGATAAGGACATTGGAAATAGAATTCTGAAGAAGCTTGAGAAGAATATAAGTATGTCTAGGAATGCAATACCTTTTTGGGCTGGAAATGACAAGTTTGAGGTGGAGTCCGGTACATCTCATTATGCTGTAGACCTTGATGTGCGAACTTGTACCTATGGGTTGTGGCAAGTCGACCAAGAAAACAGAGGAAATGAGATGATGATGAAGCTGGGACTTCAAGTACAGAAATCTCTAGAAAGTTTAAATGTGGTAGATGCAGGTTGTCCGAACATAACTCTAGATCTTGCAAAGGAAAATATTGGAACACATGAGTCTGCTGCAACTTCATCTGATCCACATGGAACTAGATCTGTTGCTGAGACTTCATCTTCTGTTGGGACTTCATCTGCTGCCGAGACTTCGTTTGCTGCCGAGACTCCATTTGCTACAACTCCATCTGCTAAGACTCCATCTGCTGCGACTCAAAGAAAAGGAAAAAAACGTGCGTTAGAGAAGATGTGA

Coding sequence (CDS)

ATGAACTCCAATTGGGTTGCCAAGATGTATTTGGAACGGTTTAGGAGTCAACCTAATTGGTCTTTTGCTGAAATTGTTGAGGAGGTGAAAAAGGACTATCAATGTGATTTCTTGCTTAATAATTTGTCGGAGTCATTTAATGCAATATTGCCAGCAAGAAACAAGCCCATAATTCAATTGTTTGAAACCATTAGGAAGTTGATAATGGTTTGGATTACAAAGAAACATGAAAAAAGTAATAGGATGGATAAGGACATTGGAAATAGAATTCTGAAGAAGCTTGAGAAGAATATAAGTATGTCTAGGAATGCAATACCTTTTTGGGCTGGAAATGACAAGTTTGAGGTGGAGTCCGGTACATCTCATTATGCTGTAGACCTTGATGTGCGAACTTGTACCTATGGGTTGTGGCAAGTCGACCAAGAAAACAGAGGAAATGAGATGATGATGAAGCTGGGACTTCAAGTACAGAAATCTCTAGAAAGTTTAAATGTGGTAGATGCAGGTTGTCCGAACATAACTCTAGATCTTGCAAAGGAAAATATTGGAACACATGAGTCTGCTGCAACTTCATCTGATCCACATGGAACTAGATCTGTTGCTGAGACTTCATCTTCTGTTGGGACTTCATCTGCTGCCGAGACTTCGTTTGCTGCCGAGACTCCATTTGCTACAACTCCATCTGCTAAGACTCCATCTGCTGCGACTCAAAGAAAAGGAAAAAAACGTGCGTTAGAGAAGATGTGA

Protein sequence

MNSNWVAKMYLERFRSQPNWSFAEIVEEVKKDYQCDFLLNNLSESFNAILPARNKPIIQLFETIRKLIMVWITKKHEKSNRMDKDIGNRILKKLEKNISMSRNAIPFWAGNDKFEVESGTSHYAVDLDVRTCTYGLWQVDQENRGNEMMMKLGLQVQKSLESLNVVDAGCPNITLDLAKENIGTHESAATSSDPHGTRSVAETSSSVGTSSAAETSFAAETPFATTPSAKTPSAATQRKGKKRALEKM

Homology

[Close]

BLAST of Spg007766 vs. NCBI nr
Match: XP_012842750.1 (PREDICTED: uncharacterized protein LOC105962952 [Erythranthe guttata])

HSP 1 Score: 91.7 bits (226), Expect = 9.8e-15
Identity = 49/106 (46.23%), Postives = 64/106 (60.38%), Query Frame = 0


Query: 36  DFLLNNLSESF-NAILPARNKPIIQLFETIRKLIMVWITKKHEKSNRMDKDIGNRILKKL 95
           D ++NNL ESF N IL AR KPI+ +FE IR  +   I  K E   + +  I   ILKK+
Sbjct: 265 DVVVNNLCESFNNFILQAREKPIVSMFEWIRARLTTRIQVKREGMEKYEGQICPNILKKI 324

Query: 96  EKNISMSRNAIPFWAGNDKFEVESGTSHYAVDLDVRTCTYGLWQVD 141
            K    +RN  P W G D+FEVE+ T  Y V LD RTCT G++Q++
Sbjct: 325 NKYEKYARNCFPRWCGGDEFEVEAYTDRYVVHLDKRTCTCGMFQLN 370

[Close]

BLAST of Spg007766 vs. NCBI nr
Match: XP_012852518.1 (PREDICTED: uncharacterized protein LOC105972122 [Erythranthe guttata])

HSP 1 Score: 91.7 bits (226), Expect = 9.8e-15
Identity = 49/106 (46.23%), Postives = 64/106 (60.38%), Query Frame = 0


Query: 36  DFLLNNLSESF-NAILPARNKPIIQLFETIRKLIMVWITKKHEKSNRMDKDIGNRILKKL 95
           D ++NNL ESF N IL AR KPI+ +FE IR  +   I  K E   + +  I   ILKK+
Sbjct: 677 DVVVNNLCESFNNFILQAREKPIVSMFEWIRARLTTRIQVKREGMEKYEGQICPNILKKI 736

Query: 96  EKNISMSRNAIPFWAGNDKFEVESGTSHYAVDLDVRTCTYGLWQVD 141
            K    +RN  P W G D+FEVE+ T  Y V LD RTCT G++Q++
Sbjct: 737 NKYEKYARNCFPRWCGGDEFEVEAYTDRYVVHLDKRTCTCGMFQLN 782

[Close]

BLAST of Spg007766 vs. NCBI nr
Match: XP_021800300.1 (uncharacterized protein LOC110744622 [Prunus avium])

HSP 1 Score: 90.1 bits (222), Expect = 2.9e-14
Identity = 49/108 (45.37%), Postives = 68/108 (62.96%), Query Frame = 0


Query: 34  QCDFLLNNLSESFNA-ILPARNKPIIQLFETIRKLIMVWITKKHEKSNRMDKDIGNRILK 93
           +CD LLNNL ESFNA IL  R++PI+ +FE IR  +M  I  + EK  + +K I  RI K
Sbjct: 196 KCDMLLNNLCESFNATILECRDRPILSMFEYIRCKLMRRIQGRREKMLKWNKPICPRIFK 255

Query: 94  KLEKNISMSRNAIPFWAGNDKFEV-ESGTSHYAVDLDVRTCTYGLWQV 140
           K+E N + +   +  W+G  KF+V  SG + Y VDLD+RTC+   W +
Sbjct: 256 KVEGNKAKASACVAMWSGGGKFQVAASGHARYIVDLDLRTCSCKAWDL 303

[Close]

BLAST of Spg007766 vs. NCBI nr
Match: KAG8382755.1 (hypothetical protein BUALT_Bualt05G0110300 [Buddleja alternifolia])

HSP 1 Score: 89.4 bits (220), Expect = 4.9e-14
Identity = 47/107 (43.93%), Postives = 66/107 (61.68%), Query Frame = 0


Query: 34  QCDFLLNNLSESFNA-ILPARNKPIIQLFETIRKLIMVWITKKHEKSNRMDKDIGNRILK 93
           +CD ++NN+SESFN+ IL  R  PIIQ+FE IR ++M  I  K E   R  + +   ILK
Sbjct: 670 KCDVIVNNISESFNSYILETRGLPIIQMFEWIRMMLMARIQIKREGMERYTRAVCPNILK 729

Query: 94  KLEKNISMSRNAIPFWAGNDKFEVESGTSHYAVDLDVRTCTYGLWQV 140
           K+EK   +SRN    WA  DKFEV+     + V LD + C+ G++Q+
Sbjct: 730 KIEKQRELSRNCFATWACGDKFEVKHFLEKHVVHLDEQYCSCGMFQL 776

[Close]

BLAST of Spg007766 vs. NCBI nr
Match: XP_020410029.1 (uncharacterized protein LOC18790135 [Prunus persica])

HSP 1 Score: 87.0 bits (214), Expect = 2.4e-13
Identity = 46/108 (42.59%), Postives = 68/108 (62.96%), Query Frame = 0


Query: 34  QCDFLLNNLSESFNA-ILPARNKPIIQLFETIRKLIMVWITKKHEKSNRMDKDIGNRILK 93
           +CD LLNNL ESFNA IL  R++PI+ +FE IR ++M  I  + +K    +K I  RI K
Sbjct: 766 KCDMLLNNLCESFNATILECRDRPILSMFEYIRCMLMRRIQARRDKMLTWNKPICPRIFK 825

Query: 94  KLEKNISMSRNAIPFWAGNDKFEVES-GTSHYAVDLDVRTCTYGLWQV 140
           K+E N + +   +  W+G  KF+V + G + Y VDL++RTC+   W +
Sbjct: 826 KVEGNKAKAGACVAMWSGGGKFQVSAGGHAQYIVDLELRTCSCRAWDL 873

[Close]

BLAST of Spg007766 vs. ExPASy TrEMBL
Match: A0A6P5R5P9 (uncharacterized protein LOC110744622 OS=Prunus avium OX=42229 GN=LOC110744622 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.4e-14
Identity = 49/108 (45.37%), Postives = 68/108 (62.96%), Query Frame = 0


Query: 34  QCDFLLNNLSESFNA-ILPARNKPIIQLFETIRKLIMVWITKKHEKSNRMDKDIGNRILK 93
           +CD LLNNL ESFNA IL  R++PI+ +FE IR  +M  I  + EK  + +K I  RI K
Sbjct: 196 KCDMLLNNLCESFNATILECRDRPILSMFEYIRCKLMRRIQGRREKMLKWNKPICPRIFK 255

Query: 94  KLEKNISMSRNAIPFWAGNDKFEV-ESGTSHYAVDLDVRTCTYGLWQV 140
           K+E N + +   +  W+G  KF+V  SG + Y VDLD+RTC+   W +
Sbjct: 256 KVEGNKAKASACVAMWSGGGKFQVAASGHARYIVDLDLRTCSCKAWDL 303

[Close]

BLAST of Spg007766 vs. ExPASy TrEMBL
Match: M5XV08 (Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppb022847mg PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.2e-13
Identity = 46/110 (41.82%), Postives = 69/110 (62.73%), Query Frame = 0


Query: 34  QCDFLLNNLSESFNA-ILPARNKPIIQLFETIRKLIMVWITKKHEKSNRMDKDIGNRILK 93
           +CD LLNNL ESFNA IL  R++PI+ +FE IR ++M  I  + +K    +K I  RI K
Sbjct: 818 KCDMLLNNLCESFNATILECRDRPILSMFEYIRCMLMRRIQARRDKMLTWNKPICPRIFK 877

Query: 94  KLEKNISMSRNAIPFWAGNDKFEVES-GTSHYAVDLDVRTCTYGLWQVDQ 142
           K+E N + +   +  W+G  KF+V + G + Y VDL++RTC+   W + +
Sbjct: 878 KVEGNKAKAGACVAMWSGGGKFQVSAGGHAQYIVDLELRTCSCRAWDLQR 927

[Close]

BLAST of Spg007766 vs. ExPASy TrEMBL
Match: M5XUV7 (Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppb013340mg PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.2e-13
Identity = 46/108 (42.59%), Postives = 68/108 (62.96%), Query Frame = 0


Query: 34  QCDFLLNNLSESFNA-ILPARNKPIIQLFETIRKLIMVWITKKHEKSNRMDKDIGNRILK 93
           +CD LLNNL ESFNA IL  R++PI+ +FE IR ++M  I  + +K    +K I  RI K
Sbjct: 736 KCDMLLNNLCESFNATILECRDRPILSMFEYIRCMLMRRIQARRDKMLTWNKPICPRIFK 795

Query: 94  KLEKNISMSRNAIPFWAGNDKFEVES-GTSHYAVDLDVRTCTYGLWQV 140
           K+E N + +   +  W+G  KF+V + G + Y VDL++RTC+   W +
Sbjct: 796 KVEGNKAKAGACVAIWSGGGKFQVSAGGHAQYIVDLELRTCSCRAWDL 843

[Close]

BLAST of Spg007766 vs. ExPASy TrEMBL
Match: M5XMT5 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppb016826mg PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.2e-13
Identity = 46/108 (42.59%), Postives = 68/108 (62.96%), Query Frame = 0


Query: 34  QCDFLLNNLSESFNA-ILPARNKPIIQLFETIRKLIMVWITKKHEKSNRMDKDIGNRILK 93
           +CD LLNNL ESFNA IL  R++PI+ +FE IR ++M  I  + +K    +K I  RI K
Sbjct: 766 KCDMLLNNLCESFNATILECRDRPILSMFEYIRCMLMRRIQARRDKMLTWNKPICPRIFK 825

Query: 94  KLEKNISMSRNAIPFWAGNDKFEVES-GTSHYAVDLDVRTCTYGLWQV 140
           K+E N + +   +  W+G  KF+V + G + Y VDL++RTC+   W +
Sbjct: 826 KVEGNKAKAGACVAMWSGGGKFQVSAGGHAQYIVDLELRTCSCRAWDL 873

[Close]

BLAST of Spg007766 vs. ExPASy TrEMBL
Match: M5XKE3 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppb016632mg PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.2e-13
Identity = 46/108 (42.59%), Postives = 68/108 (62.96%), Query Frame = 0


Query: 34  QCDFLLNNLSESFNA-ILPARNKPIIQLFETIRKLIMVWITKKHEKSNRMDKDIGNRILK 93
           +CD LLNNL ESFNA IL  R++PI+ +FE IR ++M  I  + +K    +K I  RI K
Sbjct: 762 KCDMLLNNLCESFNATILECRDRPILSMFEYIRCMLMRRIQARRDKMLTWNKPICPRIFK 821

Query: 94  KLEKNISMSRNAIPFWAGNDKFEVES-GTSHYAVDLDVRTCTYGLWQV 140
           K+E N + +   +  W+G  KF+V + G + Y VDL++RTC+   W +
Sbjct: 822 KVEGNKAKAGACVAMWSGGGKFQVSAGGHAQYIVDLELRTCSCRAWDL 869

The following BLAST results are available for this feature:

BLAST of Spg007766 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_012842750.1	9.8e-15	46.23	PREDICTED: uncharacterized protein LOC105962952 [Erythranthe guttata]	[more]
XP_012852518.1	9.8e-15	46.23	PREDICTED: uncharacterized protein LOC105972122 [Erythranthe guttata]	[more]
XP_021800300.1	2.9e-14	45.37	uncharacterized protein LOC110744622 [Prunus avium]	[more]
KAG8382755.1	4.9e-14	43.93	hypothetical protein BUALT_Bualt05G0110300 [Buddleja alternifolia]	[more]
XP_020410029.1	2.4e-13	42.59	uncharacterized protein LOC18790135 [Prunus persica]	[more]

BLAST of Spg007766 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg007766 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6P5R5P9	1.4e-14	45.37	uncharacterized protein LOC110744622 OS=Prunus avium OX=42229 GN=LOC110744622 PE...	[more]
M5XV08	1.2e-13	41.82	Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppb022847m...	[more]
M5XUV7	1.2e-13	42.59	Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppb013340m...	[more]
M5XMT5	1.2e-13	42.59	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppb016826mg PE=4 SV=1	[more]
M5XKE3	1.2e-13	42.59	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppb016632mg PE=4 SV=1	[more]

BLAST of Spg007766 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 185..248
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 185..235

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg007766.1	Spg007766.1	mRNA