Spg007646 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg007646
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Nucleoid-associated protein
Location	scaffold2: 1459172 .. 1463905 (-)
RNA-Seq Expression	Spg007646
Synteny	Spg007646

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCGACAATATCTCTGAGTGCTCAAGTTCCAAATCTGAGAGGAATTTCTGATTGGAAAAAACGAAGTTAGTACCATTCTCTAACTCTTTTTCTCTCTGAATCTTTTTATTTTCTTTTGGTTGTTGAGACCGTAGGAAAGCGAGGGATATGTTTTAGTTTGATTGCTGTATCTCTGAATAGAAGTGGTTGCTTGGAACTTGGTTCTGTATTGTAGATTATGTAGCTATCTCGCAACCACTCAATTGAACGGAGGGATGTAAGTTGGTGCGGTTGGTAAGTATGGCGTGGTTCATTGGGAAGCTTTGCCGATCGGTTGAAGTTTAGACCTAAAATAGAACTGTCTGGTGGTGTCCTCTCAGTTCTTATTACTGGATGGGTTAGGTTCATTTCTATTTAGGAATTATTGTTTGCTTTGTAGAATCAAAGTAAATTTGTGATTGATGAATGGGGAGATTCTCTTGATTTGAACTCGAAGGCAGATGCGTTTTGTGTACAGTATTGTATAAAGAACACGAAAGAAAATGGCTGTGATCTGGGTAATTAACGTGAAAAATATTCAATAAGTTTGGATAAGCCTCTAAACTTTTTAGCACTAGGGCTAACTTTAAGATTTTCCACCTGAAAGGCATGTTATAGAGAAGGAATTACATGAGCCGGTCAAGTTTGATTCTTAATTTGTAACCTAGACTGAAGCCGGTTGCATTTCTGACAACGCCAATGTTAGAACGAAATTCCTTAACAAGCTAGATATTAACGTTGTATAACCTAGCAGTGCATGCGGTTTTAGAATTTTGTGGTTTGCTTTTTATGATTTGGAATGTAATACTTTGGACAATAGAAATTTGTATGCACCTGCGAAGTCCTTGTTTATTTCCAAACTTTCATTCTGAAATCGGAGTCAAGTCTAATTTTTTGAGACATTGGATTGTTCACATTATATTTGTTAATATATTATTTTTCCTCTTTCAGGTAACCTAAATTCAATGTCAAATATAGTTGGTGTGCGGATCTCACCTTATGGTCCTTCCAAAGTTGAGAAAAATAATAGATCTCTTTGTGTTTATGGTCTATTTGGAGGAAAAAAGGAGAATGAGGGGAAGAGTGACGATGCGCCTTCAAAGGTAGAATTTTGACCTGCAATATGATCAAAATAGTAAAAAAAAAAAAAAAAAAGTTCGATGAATTGCCATTTCCAGTCATTTAGAGACCAAACTGAAAGTGACTTCGAGCAAGTGAGGTGAGACTATCGTTACTTACGTGCTAACTTTTTTTAGGCAGGAATCTTTGGAAACATGCAGAAGTTATATGAAACTGTGAGGACAGCACAACAGGTTGTCCAAGTAGAGGCAGTGCGTGTACAAAAAGAACTTGCGGCGTAAGAATAAACAAGTTAAATGAATGTATTGTCACTTGAAGATGTTTCTTTTTCTGTTTTATGAAGTTGTTTGAAATCTTCTTTTCCTTCTATGTTGTTTTTCAGTGCAGAGTTTGATGGCTACTGTGAAGGAGAGCTAATAAAGGTATGTTCCGCCTTTTCTTTCTTTCGTCAACTTCATCTTCACTCTGCCCATAACTATGCAATTACAGAGGTTGTTAGTGATGTGGACGTGGGTTAGAATTTCGCTTAAGCTTGTAAAACATTTTCTCCCTCTTGAATTTAGGTGGCTAGTAAATAAGTACAGATTCCAGAGTAACGACTTTATTATTATTGCGTGGAAGAACAAGGCAAGAGTTTGTGATTTCCAAGTTTTCTTTCTTGCTATAAGATGATAGGCGAATCCTATTTCTTTATAATCAACCAGGTCGTTGTGGGTTTGAAATCTCTTGGGGCCATCTCCCTCAGATATTATTTGTTATAAAAATATTTGTAGTATCAATTGAGAGCTCCAGTGTTGATCCCCATGGACATGGAAAGTTCAGGGAATTAAAAGAGATAAAATCACGATTTATGAAAAATAATTATAGAAGTTTTTAGCTTGCGACTAAAGGTTATGGATTTGACGATTGGTTTCATGCAAGGCCTAACACAGCCTTTTCATTTGATGAGAGTTATGCTATTAAAAAGTGGATTCATATCATGTTTACATGTCACCTCATATCTACCCTCATATCTTTCTGTCGACTAATTTAGGTGACATTATCCGGGAATCAGCAACCACTTCGCACAGAGATCACCGAGGCTGCAATGAAATTAGGACCAGAAGTGAGTATGCACAGTGCTGTAGTGCACTCTAACATTTGAAATTGCATTGCGCTCGTTAACATTGTTGTTGGATGGAAGATCTTCACTTTCACTATCAATTTTACTTTATCATTTTTTTATTGAACTTATATTCACGTCCTCACAAGTCACAACTTAATGCTGCACTACCGGTCTTGTCCTCAATCCAAGCTTGGGTGGATTTATGACTCTCACACTTCATGAGTTTAAAAGTTGGCCGATTATAGGCCTAGGGCCTGCCTGCATTGGAACTTGGCTCAAAGTAAATTGACAACCATAATTGAATATTTAAGAATATAGTGTGCAGTAACATTGTAAAGATTATGTTTGCCAGGATATCTCTTGAATGGGTAGTCTTCGTAGTGCCAGAATAACCATTAAAATTTCTGATCGTGCTTAATGATAGATATTCCCAATATTCAGAGCTTCACTTTCTTATGCAGAAACTTTCCCTTCTAGTCACTGAAGCGTACCAGGATGCACACCAGAAGAGCGTTCAGGTAAGACTCATTTTGATAGTAATTGAATTACTAAGTTTTATTTTCTGTAGAACTGACTGTCGGTCCTCTGATTCTCAGGCCATGAAGCAAAGAATGAGTGATCTTGCCCAGAGCTTAGGTATGCCGCAGGGCCTCAGTGAGGGATTGAAGTAGACCTTTTTATCTCTGTCGAGCTTCAGTTTTGTAAATGCAGCGGCAGTGGGACAACTTAATTGTAATCTGACCTTGGCAGCAAATTCCATATAAGTTTTTACTGGTGAACTAAATGTTTGAGAACCTTGCTCTCCAACTCTAAATGTAAAAAAGACAGGTGATATTTATTGTGAAATCAGAACAAAGAATGAAAAGAATGAGATGAGAACAAGATTTCAAATTGGAATCTTCTATAGAAGCGATATCGACACTGGCATTTAGGTCTGCTCAAGGGAAAGATTCTTGACAATGTATGGACATTTGATTTCTTGAAAAGAAAAGGCTTAAAACTTCTACTTTGCAAGTTCGGATAGGATAATCACTGACAGATGTTAGTAAAATAATCTCCGTTCAACCTTTTCATCTGCGGACTTGAAATGGGTAATAACATTGACATGTTGTATCCAATATAAATTGTAGAATGAATACAATTCTAGTTCCCTAACTCTCAGCACTGTTCTGTACTGGAATTGTTGCAAATTAATGGCCAATATCTAGAAACGAGACAAATGACCAGTTTCTTGTTCTCTGTTCATTGGTCTGTTTCTTTGCAGATAAATCAAGATTTTGGCAGTTGTTTTCCTGCTAGAAACGATCTGAAAAGTGTCAAAGCTCTCTGCGGCTGGATCAATGGAACTTCGTGCCCAGCTCCTCTCACTGTGGCAAAGGTTAGCCCTTCATAAACCTCTGTCCATCCACCGACCTACCAAGTACATTTCATTTGTTTAGAGCCCTTCACTCAAAACTAAGAAAAACAAAAAACAAAGAAGGAAGAATTTTTATATGCAACCTGTCCTCTGGAGTACCATGGATACCAGCGAGTTTTAATGGGGAGATTGAGATGGTTGAGTGCGAATCTAGTGGCTGTCACTGGAACCACTGAATCTGTATCCCCACTGCAAATTTTCACATGTAAAAGTCACATTAAACAGAAATTTCTGCCTAAGTTTAACCTCTCTTTTACTTGGGAACTTAGGTGAATTTACGTGGAACCTCCTCTACACTTCAATTTTACTGTATATTGAATGAGAGTGACAAAGAATGAAGTGTTGGGAAAAGGAAATGAAATGACAAACAAGGATTTATGTGGAAAGATTAGAGCTTTTCAAATCTAACCTAAAAACCCATATCCTGAGACCAGCTGCAATCAGCTCCTTGTATGTGGGCAACATAGATTCTTGGGAATCCTTCCAGTTCTTAAGAAGAACATCACTGCCACCCAGAAAAGAAAAACAAAACTTTATTAGGTGAAAGAGTATAAGATTTGGCCAAAAACCGAGAAGCTATCAAAAACCCACCTGCAAGCAGTCCATTTGTAGGGAATTCCAGTAACATTGGCATGCATTGCCAACTGAACCTCTTTAAGATTATAATACTTCTCTGCATAATTCTCAGTACATGGATCGTACCCCGACACCCTCCGCCGAAGAAGAGAGTTTTTGAATCTAATAGTAGCCGCCCCCGCCACCGTGTTGTTCGGAACCACGGTGGGGCATTTGGGAGTGTAGATACTGTACTGATCCACATTGCCAAACTCATGGTTCATGGCATAACCCACTGCCTCGTCGCATTTCCGGGAAGTCCTTTCGGAAGTGAAATTGCAGTGCTTGAGGATCGAGTTATATGTTGTATCTGATATCATAGCATGGCTCCACCAATACGTCACCGTTCCAAGGGCATCGTAGTTTGTATCTGTTACTGCATTTCCCACCTGCCATTTTCAAAACTTCAGTATAATTCCATAACTCCATTGGTTCCATTGGTTCCTATATATAATACAATTTTCTGTTCTTACAAGGAAGCCTTTGAGGTTGAT

mRNA sequence

ATGGCGTCGACAATATCTCTGAGTGCTCAAGTTCCAAATCTGAGAGGAATTTCTGATTGGAAAAAACGAAGAAAGCGAGGGATATGTTTTAGTTTGATTGCTGTATCTCTGAATAGAAGTGGTTGCTTGGAACTTGGTTCTAATCAAAGTAAATTTGTGATTGATGAATGGGGAGATTCTCTTGATTTGAACTCGAAGGCAGATGCGTTTTGTGTACAGTATTGTATAAAGAACACGAAAGAAAATGGCTGTGATCTGGGTAACCTAAATTCAATGTCAAATATAGTTGGTGTGCGGATCTCACCTTATGGTCCTTCCAAAGTTGAGAAAAATAATAGATCTCTTTGTGTTTATGGTCTATTTGGAGGAAAAAAGGAGAATGAGGGGAAGAGTGACGATGCGCCTTCAAAGGCAGGAATCTTTGGAAACATGCAGAAGTTATATGAAACTGTGAGGACAGCACAACAGGTTGTCCAAGTAGAGGCAGTGCGTGTACAAAAAGAACTTGCGGCTGCAGAGTTTGATGGCTACTGTGAAGGAGAGCTAATAAAGGTGACATTATCCGGGAATCAGCAACCACTTCGCACAGAGATCACCGAGGCTGCAATGAAATTAGGACCAGAAGTGAAGCTTCACTTTCTTATGCAGAAACTTTCCCTTCTAGTCACTGAAGCGTACCAGGATGCACACCAGAAGAGCGTTCAGGCCATGAAGCAAAGAATGAGTGATCTTGCCCAGAGCTTAGGTATGCCGCAGGGCCTCAGTGAGGGATTGAAGTAG

Coding sequence (CDS)

ATGGCGTCGACAATATCTCTGAGTGCTCAAGTTCCAAATCTGAGAGGAATTTCTGATTGGAAAAAACGAAGAAAGCGAGGGATATGTTTTAGTTTGATTGCTGTATCTCTGAATAGAAGTGGTTGCTTGGAACTTGGTTCTAATCAAAGTAAATTTGTGATTGATGAATGGGGAGATTCTCTTGATTTGAACTCGAAGGCAGATGCGTTTTGTGTACAGTATTGTATAAAGAACACGAAAGAAAATGGCTGTGATCTGGGTAACCTAAATTCAATGTCAAATATAGTTGGTGTGCGGATCTCACCTTATGGTCCTTCCAAAGTTGAGAAAAATAATAGATCTCTTTGTGTTTATGGTCTATTTGGAGGAAAAAAGGAGAATGAGGGGAAGAGTGACGATGCGCCTTCAAAGGCAGGAATCTTTGGAAACATGCAGAAGTTATATGAAACTGTGAGGACAGCACAACAGGTTGTCCAAGTAGAGGCAGTGCGTGTACAAAAAGAACTTGCGGCTGCAGAGTTTGATGGCTACTGTGAAGGAGAGCTAATAAAGGTGACATTATCCGGGAATCAGCAACCACTTCGCACAGAGATCACCGAGGCTGCAATGAAATTAGGACCAGAAGTGAAGCTTCACTTTCTTATGCAGAAACTTTCCCTTCTAGTCACTGAAGCGTACCAGGATGCACACCAGAAGAGCGTTCAGGCCATGAAGCAAAGAATGAGTGATCTTGCCCAGAGCTTAGGTATGCCGCAGGGCCTCAGTGAGGGATTGAAGTAG

Protein sequence

MASTISLSAQVPNLRGISDWKKRRKRGICFSLIAVSLNRSGCLELGSNQSKFVIDEWGDSLDLNSKADAFCVQYCIKNTKENGCDLGNLNSMSNIVGVRISPYGPSKVEKNNRSLCVYGLFGGKKENEGKSDDAPSKAGIFGNMQKLYETVRTAQQVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPLRTEITEAAMKLGPEVKLHFLMQKLSLLVTEAYQDAHQKSVQAMKQRMSDLAQSLGMPQGLSEGLK

Homology

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BLAST of Spg007646 vs. NCBI nr
Match: XP_038879412.1 (nucleoid-associated protein At4g30620, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 312.4 bits (799), Expect = 3.7e-81
Identity = 179/259 (69.11%), Postives = 189/259 (72.97%), Query Frame = 0


Query: 1   MASTISLSAQVPNLRGISDWKKRRKRGICFSLIAVSLNRSGCLELGSNQSKFVIDEWGDS 60
           MASTISLSAQ+PNLRG+SD+KKR                  C+ L               
Sbjct: 1   MASTISLSAQLPNLRGMSDFKKR-----------------SCMPL--------------- 60

Query: 61  LDLNSKADAFCVQYCIKNTKENGCDLGNLNSMSNIVGVRISPYGPSKVEKNNRSLCVYGL 120
                                     GNLNS+SNI+GVRISPYGP KVEK+NRSLCVYGL
Sbjct: 61  -------------------------TGNLNSVSNIIGVRISPYGPWKVEKHNRSLCVYGL 120

Query: 121 FGGKKENEGKSDDAPSKAGIFGNMQKLYETVRTAQQVVQVEAVRVQKELAAAEFDGYCEG 180
           FGGKK+NE KSDDAPSKAGIFGNMQKLYETVRTAQ+VVQVEAVRVQKELAAAEFDGYCEG
Sbjct: 121 FGGKKDNEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEG 180

Query: 181 ELIKVTLSGNQQPLRTEITEAAMKLGPEVKLHFLMQKLSLLVTEAYQDAHQKSVQAMKQR 240
           ELIKVTLSGNQQPLRTEITEAAM+LGPE        KLSLLVTEAYQDAHQKSVQAMKQR
Sbjct: 181 ELIKVTLSGNQQPLRTEITEAAMELGPE--------KLSLLVTEAYQDAHQKSVQAMKQR 194

Query: 241 MSDLAQSLGMPQGLSEGLK 260
           MSDLAQSLGMPQGLSEGLK
Sbjct: 241 MSDLAQSLGMPQGLSEGLK 194

[Close]

BLAST of Spg007646 vs. NCBI nr
Match: XP_022932159.1 (nucleoid-associated protein At4g30620, chloroplastic-like isoform X1 [Cucurbita moschata] >XP_022965200.1 nucleoid-associated protein At4g30620, chloroplastic-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 311.2 bits (796), Expect = 8.2e-81
Identity = 179/259 (69.11%), Postives = 181/259 (69.88%), Query Frame = 0


Query: 1   MASTISLSAQVPNLRGISDWKKRRKRGICFSLIAVSLNRSGCLELGSNQSKFVIDEWGDS 60
           MASTIS+SAQVPNLRGISDWKKR                                     
Sbjct: 1   MASTISISAQVPNLRGISDWKKR------------------------------------- 60

Query: 61  LDLNSKADAFCVQYCIKNTKENGCDLGNLNSMSNIVGVRISPYGPSKVEKNNRSLCVYGL 120
                                      NLNSMS I+G RISPYGP KVEKNNRSLCV GL
Sbjct: 61  --------------------------SNLNSMSKIIGTRISPYGPWKVEKNNRSLCVCGL 120

Query: 121 FGGKKENEGKSDDAPSKAGIFGNMQKLYETVRTAQQVVQVEAVRVQKELAAAEFDGYCEG 180
           FGGKKENE KSDDAPSKAGIFGNMQKLYETVRTAQQVVQVEAVRVQKELA AEFDGYCEG
Sbjct: 121 FGGKKENEEKSDDAPSKAGIFGNMQKLYETVRTAQQVVQVEAVRVQKELAVAEFDGYCEG 180

Query: 181 ELIKVTLSGNQQPLRTEITEAAMKLGPEVKLHFLMQKLSLLVTEAYQDAHQKSVQAMKQR 240
           ELIKVTLSGNQQPLRTEITEAAMKLGPE        KLSLLVTEAYQDAHQKSVQAMKQR
Sbjct: 181 ELIKVTLSGNQQPLRTEITEAAMKLGPE--------KLSLLVTEAYQDAHQKSVQAMKQR 188

Query: 241 MSDLAQSLGMPQGLSEGLK 260
           MSDLAQSLGMPQGLSEGLK
Sbjct: 241 MSDLAQSLGMPQGLSEGLK 188

[Close]

BLAST of Spg007646 vs. NCBI nr
Match: KAG6587818.1 (Nucleoid-associated protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 308.9 bits (790), Expect = 4.1e-80
Identity = 178/259 (68.73%), Postives = 180/259 (69.50%), Query Frame = 0


Query: 1   MASTISLSAQVPNLRGISDWKKRRKRGICFSLIAVSLNRSGCLELGSNQSKFVIDEWGDS 60
           MASTIS+SAQVPNLRGISDWKKR                                     
Sbjct: 1   MASTISISAQVPNLRGISDWKKR------------------------------------- 60

Query: 61  LDLNSKADAFCVQYCIKNTKENGCDLGNLNSMSNIVGVRISPYGPSKVEKNNRSLCVYGL 120
                                      NLNSMS I+G RISPYGP KVEKN RSLCV GL
Sbjct: 61  --------------------------SNLNSMSKIIGTRISPYGPWKVEKNKRSLCVCGL 120

Query: 121 FGGKKENEGKSDDAPSKAGIFGNMQKLYETVRTAQQVVQVEAVRVQKELAAAEFDGYCEG 180
           FGGKKENE KSDDAPSKAGIFGNMQKLYETVRTAQQVVQVEAVRVQKELA AEFDGYCEG
Sbjct: 121 FGGKKENEEKSDDAPSKAGIFGNMQKLYETVRTAQQVVQVEAVRVQKELAVAEFDGYCEG 180

Query: 181 ELIKVTLSGNQQPLRTEITEAAMKLGPEVKLHFLMQKLSLLVTEAYQDAHQKSVQAMKQR 240
           ELIKVTLSGNQQPLRTEITEAAMKLGPE        KLSLLVTEAYQDAHQKSVQAMKQR
Sbjct: 181 ELIKVTLSGNQQPLRTEITEAAMKLGPE--------KLSLLVTEAYQDAHQKSVQAMKQR 188

Query: 241 MSDLAQSLGMPQGLSEGLK 260
           MSDLAQSLGMPQGLSEGLK
Sbjct: 241 MSDLAQSLGMPQGLSEGLK 188

[Close]

BLAST of Spg007646 vs. NCBI nr
Match: XP_038879413.1 (nucleoid-associated protein At4g30620, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 307.0 bits (785), Expect = 1.6e-79
Identity = 176/259 (67.95%), Postives = 185/259 (71.43%), Query Frame = 0


Query: 1   MASTISLSAQVPNLRGISDWKKRRKRGICFSLIAVSLNRSGCLELGSNQSKFVIDEWGDS 60
           MASTISLSAQ+PNLRG+SD+KKR                                     
Sbjct: 1   MASTISLSAQLPNLRGMSDFKKR------------------------------------- 60

Query: 61  LDLNSKADAFCVQYCIKNTKENGCDLGNLNSMSNIVGVRISPYGPSKVEKNNRSLCVYGL 120
                                      NLNS+SNI+GVRISPYGP KVEK+NRSLCVYGL
Sbjct: 61  --------------------------SNLNSVSNIIGVRISPYGPWKVEKHNRSLCVYGL 120

Query: 121 FGGKKENEGKSDDAPSKAGIFGNMQKLYETVRTAQQVVQVEAVRVQKELAAAEFDGYCEG 180
           FGGKK+NE KSDDAPSKAGIFGNMQKLYETVRTAQ+VVQVEAVRVQKELAAAEFDGYCEG
Sbjct: 121 FGGKKDNEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEG 180

Query: 181 ELIKVTLSGNQQPLRTEITEAAMKLGPEVKLHFLMQKLSLLVTEAYQDAHQKSVQAMKQR 240
           ELIKVTLSGNQQPLRTEITEAAM+LGPE        KLSLLVTEAYQDAHQKSVQAMKQR
Sbjct: 181 ELIKVTLSGNQQPLRTEITEAAMELGPE--------KLSLLVTEAYQDAHQKSVQAMKQR 188

Query: 241 MSDLAQSLGMPQGLSEGLK 260
           MSDLAQSLGMPQGLSEGLK
Sbjct: 241 MSDLAQSLGMPQGLSEGLK 188

[Close]

BLAST of Spg007646 vs. NCBI nr
Match: KAG7023441.1 (Nucleoid-associated protein, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 301.6 bits (771), Expect = 6.5e-78
Identity = 177/259 (68.34%), Postives = 179/259 (69.11%), Query Frame = 0


Query: 1   MASTISLSAQVPNLRGISDWKKRRKRGICFSLIAVSLNRSGCLELGSNQSKFVIDEWGDS 60
           MASTISLSAQVPNLRGISD KKR                                     
Sbjct: 1   MASTISLSAQVPNLRGISDLKKR------------------------------------- 60

Query: 61  LDLNSKADAFCVQYCIKNTKENGCDLGNLNSMSNIVGVRISPYGPSKVEKNNRSLCVYGL 120
                                      NLNSMSNIVG RISPYGP KVEKN+RSLCV GL
Sbjct: 61  --------------------------SNLNSMSNIVGARISPYGPWKVEKNSRSLCVCGL 120

Query: 121 FGGKKENEGKSDDAPSKAGIFGNMQKLYETVRTAQQVVQVEAVRVQKELAAAEFDGYCEG 180
           FGGKKEN  KSDDAPSKAGIFGNMQ LYETVRTAQQVVQVEAVRVQKELAAAEFDGYCEG
Sbjct: 121 FGGKKENGEKSDDAPSKAGIFGNMQNLYETVRTAQQVVQVEAVRVQKELAAAEFDGYCEG 180

Query: 181 ELIKVTLSGNQQPLRTEITEAAMKLGPEVKLHFLMQKLSLLVTEAYQDAHQKSVQAMKQR 240
           ELIKVTLSGNQQPLRTEITEAAMKLGPE        KLSLLVTEAY+DAHQKSVQAMKQR
Sbjct: 181 ELIKVTLSGNQQPLRTEITEAAMKLGPE--------KLSLLVTEAYRDAHQKSVQAMKQR 188

Query: 241 MSDLAQSLGMPQGLSEGLK 260
           MSDLAQSLGMPQGL EGLK
Sbjct: 241 MSDLAQSLGMPQGLGEGLK 188

[Close]

BLAST of Spg007646 vs. ExPASy Swiss-Prot
Match: O82230 (Nucleoid-associated protein At2g24020, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STIC2 PE=1 SV=2)

HSP 1 Score: 198.4 bits (503), Expect = 1.0e-49
Identity = 110/153 (71.90%), Postives = 123/153 (80.39%), Query Frame = 0


Query: 107 KVEKNNRSLCVYGLFGGKKENEGKSDDAPSKAGIFGNMQKLYETVRTAQQVVQVEAVRVQ 166
           K +   RSL V GLFGG  + +  S+D  SKAGIFGNMQ +YETV+ AQ VVQVEAVRVQ
Sbjct: 39  KSKNGYRSLRVNGLFGGGNK-DNNSEDGQSKAGIFGNMQNMYETVKKAQMVVQVEAVRVQ 98

Query: 167 KELAAAEFDGYCEGELIKVTLSGNQQPLRTEITEAAMKLGPEVKLHFLMQKLSLLVTEAY 226
           KELAAAEFDGYC GEL+KVTLSGNQQP+RT+ITEAAM+LG E        KLS LVTEAY
Sbjct: 99  KELAAAEFDGYCAGELVKVTLSGNQQPIRTDITEAAMELGSE--------KLSQLVTEAY 158

Query: 227 QDAHQKSVQAMKQRMSDLAQSLGMPQGLSEGLK 260
           +DAH KSV AMK+RMSDLAQSLGMP GLSEG+K
Sbjct: 159 KDAHAKSVVAMKERMSDLAQSLGMPPGLSEGMK 182

[Close]

BLAST of Spg007646 vs. ExPASy Swiss-Prot
Match: Q9M098 (Nucleoid-associated protein At4g30620, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g30620 PE=1 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 5.1e-49
Identity = 116/171 (67.84%), Postives = 131/171 (76.61%), Query Frame = 0


Query: 90  NSMSNIVGVRISPYGPSKVEKNNRSLCVYGLF-GGKKENEGKSDDAPSKAGIFGNMQKLY 149
           +S  NIV +     G      NNRSL V GLF GGKK+N+   +D  SKAGI GNMQ LY
Sbjct: 27  SSRQNIVWLNRKQSG-----NNNRSLRVNGLFGGGKKDNK---EDGQSKAGILGNMQNLY 86

Query: 150 ETVRTAQQVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPLRTEITEAAMKLGPE 209
           ETV+ AQ VVQVEAVRVQKELA AEFDGYC+GEL+KVTLSGNQQP+RT+IT+AAM+LG E
Sbjct: 87  ETVKKAQMVVQVEAVRVQKELAVAEFDGYCQGELVKVTLSGNQQPIRTDITDAAMELGSE 146

Query: 210 VKLHFLMQKLSLLVTEAYQDAHQKSVQAMKQRMSDLAQSLGMPQGLSEGLK 260
                   KLSLLVTEAY+DAH KSV AMK+RMSDLAQSLGMP GL +GLK
Sbjct: 147 --------KLSLLVTEAYKDAHSKSVLAMKERMSDLAQSLGMPPGL-DGLK 180

[Close]

BLAST of Spg007646 vs. ExPASy Swiss-Prot
Match: Q5N376 (Nucleoid-associated protein syc1054_d OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=syc1054_d PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.4e-13
Identity = 49/110 (44.55%), Postives = 67/110 (60.91%), Query Frame = 0


Query: 142 GNMQKLYETVRTAQQVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPLRTEITEA 201
           G M++L +  + AQQ VQ  A +VQ++L   E +G  +G L+KV +SGNQ+PLR EI   
Sbjct: 11  GKMKELADAFKKAQQ-VQEGAKQVQEDLNNMEIEGQAQGGLVKVWVSGNQEPLRAEIAPE 70

Query: 202 AMKLGPEVKLHFLMQKLSLLVTEAYQDAHQKSVQAMKQRMSDLAQSLGMP 252
           A+  G EV        LS LV  A +DA+QKS  AMK++M  L   LG+P
Sbjct: 71  ALNEGAEV--------LSELVAAAMKDAYQKSTAAMKEKMEALTAGLGIP 111

[Close]

BLAST of Spg007646 vs. ExPASy Swiss-Prot
Match: Q8GMT0 (Nucleoid-associated protein Synpcc7942_0464 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=Synpcc7942_0464 PE=3 SV=2)

HSP 1 Score: 77.0 bits (188), Expect = 3.4e-13
Identity = 49/110 (44.55%), Postives = 67/110 (60.91%), Query Frame = 0


Query: 142 GNMQKLYETVRTAQQVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPLRTEITEA 201
           G M++L +  + AQQ VQ  A +VQ++L   E +G  +G L+KV +SGNQ+PLR EI   
Sbjct: 11  GKMKELADAFKKAQQ-VQEGAKQVQEDLNNMEIEGQAQGGLVKVWVSGNQEPLRAEIAPE 70

Query: 202 AMKLGPEVKLHFLMQKLSLLVTEAYQDAHQKSVQAMKQRMSDLAQSLGMP 252
           A+  G EV        LS LV  A +DA+QKS  AMK++M  L   LG+P
Sbjct: 71  ALNEGAEV--------LSELVAAAMKDAYQKSTAAMKEKMEALTAGLGIP 111

[Close]

BLAST of Spg007646 vs. ExPASy Swiss-Prot
Match: Q8YM73 (Nucleoid-associated protein alr5067 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=alr5067 PE=3 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.9e-11
Identity = 47/110 (42.73%), Postives = 64/110 (58.18%), Query Frame = 0


Query: 142 GNMQKLYETVRTAQQVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPLRTEITEA 201
           G M++L E  + AQQ VQ  A R+Q+EL   E  G   G L+KV +SGNQ+P R EI+  
Sbjct: 13  GKMKELAEAFKKAQQ-VQEGAKRLQEELEQMEIQGEAGGGLVKVIVSGNQEPKRVEISPD 72

Query: 202 AMKLGPEVKLHFLMQKLSLLVTEAYQDAHQKSVQAMKQRMSDLAQSLGMP 252
           A+  G ++        LS LVT A +DA+ KS   M++RM DL   L +P
Sbjct: 73  ALAQGADL--------LSDLVTAAMKDAYIKSTATMRERMEDLTSGLELP 113

[Close]

BLAST of Spg007646 vs. ExPASy TrEMBL
Match: A0A6J1HN29 (nucleoid-associated protein At4g30620, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465126 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 4.0e-81
Identity = 179/259 (69.11%), Postives = 181/259 (69.88%), Query Frame = 0


Query: 1   MASTISLSAQVPNLRGISDWKKRRKRGICFSLIAVSLNRSGCLELGSNQSKFVIDEWGDS 60
           MASTIS+SAQVPNLRGISDWKKR                                     
Sbjct: 1   MASTISISAQVPNLRGISDWKKR------------------------------------- 60

Query: 61  LDLNSKADAFCVQYCIKNTKENGCDLGNLNSMSNIVGVRISPYGPSKVEKNNRSLCVYGL 120
                                      NLNSMS I+G RISPYGP KVEKNNRSLCV GL
Sbjct: 61  --------------------------SNLNSMSKIIGTRISPYGPWKVEKNNRSLCVCGL 120

Query: 121 FGGKKENEGKSDDAPSKAGIFGNMQKLYETVRTAQQVVQVEAVRVQKELAAAEFDGYCEG 180
           FGGKKENE KSDDAPSKAGIFGNMQKLYETVRTAQQVVQVEAVRVQKELA AEFDGYCEG
Sbjct: 121 FGGKKENEEKSDDAPSKAGIFGNMQKLYETVRTAQQVVQVEAVRVQKELAVAEFDGYCEG 180

Query: 181 ELIKVTLSGNQQPLRTEITEAAMKLGPEVKLHFLMQKLSLLVTEAYQDAHQKSVQAMKQR 240
           ELIKVTLSGNQQPLRTEITEAAMKLGPE        KLSLLVTEAYQDAHQKSVQAMKQR
Sbjct: 181 ELIKVTLSGNQQPLRTEITEAAMKLGPE--------KLSLLVTEAYQDAHQKSVQAMKQR 188

Query: 241 MSDLAQSLGMPQGLSEGLK 260
           MSDLAQSLGMPQGLSEGLK
Sbjct: 241 MSDLAQSLGMPQGLSEGLK 188

[Close]

BLAST of Spg007646 vs. ExPASy TrEMBL
Match: A0A6J1EW88 (nucleoid-associated protein At4g30620, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111438476 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 4.0e-81
Identity = 179/259 (69.11%), Postives = 181/259 (69.88%), Query Frame = 0


Query: 1   MASTISLSAQVPNLRGISDWKKRRKRGICFSLIAVSLNRSGCLELGSNQSKFVIDEWGDS 60
           MASTIS+SAQVPNLRGISDWKKR                                     
Sbjct: 1   MASTISISAQVPNLRGISDWKKR------------------------------------- 60

Query: 61  LDLNSKADAFCVQYCIKNTKENGCDLGNLNSMSNIVGVRISPYGPSKVEKNNRSLCVYGL 120
                                      NLNSMS I+G RISPYGP KVEKNNRSLCV GL
Sbjct: 61  --------------------------SNLNSMSKIIGTRISPYGPWKVEKNNRSLCVCGL 120

Query: 121 FGGKKENEGKSDDAPSKAGIFGNMQKLYETVRTAQQVVQVEAVRVQKELAAAEFDGYCEG 180
           FGGKKENE KSDDAPSKAGIFGNMQKLYETVRTAQQVVQVEAVRVQKELA AEFDGYCEG
Sbjct: 121 FGGKKENEEKSDDAPSKAGIFGNMQKLYETVRTAQQVVQVEAVRVQKELAVAEFDGYCEG 180

Query: 181 ELIKVTLSGNQQPLRTEITEAAMKLGPEVKLHFLMQKLSLLVTEAYQDAHQKSVQAMKQR 240
           ELIKVTLSGNQQPLRTEITEAAMKLGPE        KLSLLVTEAYQDAHQKSVQAMKQR
Sbjct: 181 ELIKVTLSGNQQPLRTEITEAAMKLGPE--------KLSLLVTEAYQDAHQKSVQAMKQR 188

Query: 241 MSDLAQSLGMPQGLSEGLK 260
           MSDLAQSLGMPQGLSEGLK
Sbjct: 241 MSDLAQSLGMPQGLSEGLK 188

[Close]

BLAST of Spg007646 vs. ExPASy TrEMBL
Match: A0A0A0LWF8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G256760 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 9.2e-78
Identity = 175/259 (67.57%), Postives = 182/259 (70.27%), Query Frame = 0


Query: 1   MASTISLSAQVPNLRGISDWKKRRKRGICFSLIAVSLNRSGCLELGSNQSKFVIDEWGDS 60
           MASTISLSAQ+PNLRGISD+KKR                                     
Sbjct: 1   MASTISLSAQLPNLRGISDFKKR------------------------------------- 60

Query: 61  LDLNSKADAFCVQYCIKNTKENGCDLGNLNSMSNIVGVRISPYGPSKVEKNNRSLCVYGL 120
                                      NLNSMSNIVG R+SPYGP KVEKNNRSLCVYGL
Sbjct: 61  --------------------------SNLNSMSNIVGTRLSPYGPWKVEKNNRSLCVYGL 120

Query: 121 FGGKKENEGKSDDAPSKAGIFGNMQKLYETVRTAQQVVQVEAVRVQKELAAAEFDGYCEG 180
           FGGKK+ E KSDDAPSKAGIFGNMQKLYETVRTAQ+VVQVEAVRVQKELAAAEFDGYCEG
Sbjct: 121 FGGKKDEE-KSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEG 180

Query: 181 ELIKVTLSGNQQPLRTEITEAAMKLGPEVKLHFLMQKLSLLVTEAYQDAHQKSVQAMKQR 240
           ELIKVTLSGNQQP+RTEITEAAM+LGPE        KLSLLVTEAYQDAHQKSV AMKQR
Sbjct: 181 ELIKVTLSGNQQPIRTEITEAAMELGPE--------KLSLLVTEAYQDAHQKSVLAMKQR 187

Query: 241 MSDLAQSLGMPQGLSEGLK 260
           MSDLAQSLGMPQGLSEGLK
Sbjct: 241 MSDLAQSLGMPQGLSEGLK 187

[Close]

BLAST of Spg007646 vs. ExPASy TrEMBL
Match: A0A5A7SUZ8 (Nucleoid-associated protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold271G00540 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.6e-77
Identity = 175/259 (67.57%), Postives = 181/259 (69.88%), Query Frame = 0


Query: 1   MASTISLSAQVPNLRGISDWKKRRKRGICFSLIAVSLNRSGCLELGSNQSKFVIDEWGDS 60
           MASTISLSAQ+PNLRGISD KKR                                     
Sbjct: 1   MASTISLSAQLPNLRGISDLKKR------------------------------------- 60

Query: 61  LDLNSKADAFCVQYCIKNTKENGCDLGNLNSMSNIVGVRISPYGPSKVEKNNRSLCVYGL 120
                                      NLN MSNIVG R+SPYGP KVEKNNRSLCVYGL
Sbjct: 61  --------------------------SNLNLMSNIVGTRLSPYGPWKVEKNNRSLCVYGL 120

Query: 121 FGGKKENEGKSDDAPSKAGIFGNMQKLYETVRTAQQVVQVEAVRVQKELAAAEFDGYCEG 180
           FGGKK+ E KSDDAPSKAGIFGNMQKLYETVRTAQ+VVQVEAVRVQKELAAAEFDGYCEG
Sbjct: 121 FGGKKDEE-KSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEG 180

Query: 181 ELIKVTLSGNQQPLRTEITEAAMKLGPEVKLHFLMQKLSLLVTEAYQDAHQKSVQAMKQR 240
           ELIKVTLSGNQQP+RTEITEAAM+LGPE        KLSLLVTEAYQDAHQKSVQAMKQR
Sbjct: 181 ELIKVTLSGNQQPIRTEITEAAMELGPE--------KLSLLVTEAYQDAHQKSVQAMKQR 187

Query: 241 MSDLAQSLGMPQGLSEGLK 260
           MSDLAQSLGMPQGLSEGLK
Sbjct: 241 MSDLAQSLGMPQGLSEGLK 187

[Close]

BLAST of Spg007646 vs. ExPASy TrEMBL
Match: A0A1S3B9T2 (nucleoid-associated protein At2g24020, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103487347 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.6e-77
Identity = 175/259 (67.57%), Postives = 181/259 (69.88%), Query Frame = 0


Query: 1   MASTISLSAQVPNLRGISDWKKRRKRGICFSLIAVSLNRSGCLELGSNQSKFVIDEWGDS 60
           MASTISLSAQ+PNLRGISD KKR                                     
Sbjct: 1   MASTISLSAQLPNLRGISDLKKR------------------------------------- 60

Query: 61  LDLNSKADAFCVQYCIKNTKENGCDLGNLNSMSNIVGVRISPYGPSKVEKNNRSLCVYGL 120
                                      NLN MSNIVG R+SPYGP KVEKNNRSLCVYGL
Sbjct: 61  --------------------------SNLNLMSNIVGTRLSPYGPWKVEKNNRSLCVYGL 120

Query: 121 FGGKKENEGKSDDAPSKAGIFGNMQKLYETVRTAQQVVQVEAVRVQKELAAAEFDGYCEG 180
           FGGKK+ E KSDDAPSKAGIFGNMQKLYETVRTAQ+VVQVEAVRVQKELAAAEFDGYCEG
Sbjct: 121 FGGKKDEE-KSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEG 180

Query: 181 ELIKVTLSGNQQPLRTEITEAAMKLGPEVKLHFLMQKLSLLVTEAYQDAHQKSVQAMKQR 240
           ELIKVTLSGNQQP+RTEITEAAM+LGPE        KLSLLVTEAYQDAHQKSVQAMKQR
Sbjct: 181 ELIKVTLSGNQQPIRTEITEAAMELGPE--------KLSLLVTEAYQDAHQKSVQAMKQR 187

Query: 241 MSDLAQSLGMPQGLSEGLK 260
           MSDLAQSLGMPQGLSEGLK
Sbjct: 241 MSDLAQSLGMPQGLSEGLK 187

[Close]

BLAST of Spg007646 vs. TAIR 10
Match: AT2G24020.1 (Uncharacterised BCR, YbaB family COG0718 )

HSP 1 Score: 198.4 bits (503), Expect = 7.3e-51
Identity = 110/153 (71.90%), Postives = 123/153 (80.39%), Query Frame = 0


Query: 107 KVEKNNRSLCVYGLFGGKKENEGKSDDAPSKAGIFGNMQKLYETVRTAQQVVQVEAVRVQ 166
           K +   RSL V GLFGG  + +  S+D  SKAGIFGNMQ +YETV+ AQ VVQVEAVRVQ
Sbjct: 39  KSKNGYRSLRVNGLFGGGNK-DNNSEDGQSKAGIFGNMQNMYETVKKAQMVVQVEAVRVQ 98

Query: 167 KELAAAEFDGYCEGELIKVTLSGNQQPLRTEITEAAMKLGPEVKLHFLMQKLSLLVTEAY 226
           KELAAAEFDGYC GEL+KVTLSGNQQP+RT+ITEAAM+LG E        KLS LVTEAY
Sbjct: 99  KELAAAEFDGYCAGELVKVTLSGNQQPIRTDITEAAMELGSE--------KLSQLVTEAY 158

Query: 227 QDAHQKSVQAMKQRMSDLAQSLGMPQGLSEGLK 260
           +DAH KSV AMK+RMSDLAQSLGMP GLSEG+K
Sbjct: 159 KDAHAKSVVAMKERMSDLAQSLGMPPGLSEGMK 182

[Close]

BLAST of Spg007646 vs. TAIR 10
Match: AT2G24020.2 (Uncharacterised BCR, YbaB family COG0718 )

HSP 1 Score: 198.4 bits (503), Expect = 7.3e-51
Identity = 110/153 (71.90%), Postives = 123/153 (80.39%), Query Frame = 0


Query: 107 KVEKNNRSLCVYGLFGGKKENEGKSDDAPSKAGIFGNMQKLYETVRTAQQVVQVEAVRVQ 166
           K +   RSL V GLFGG  + +  S+D  SKAGIFGNMQ +YETV+ AQ VVQVEAVRVQ
Sbjct: 37  KSKNGYRSLRVNGLFGGGNK-DNNSEDGQSKAGIFGNMQNMYETVKKAQMVVQVEAVRVQ 96

Query: 167 KELAAAEFDGYCEGELIKVTLSGNQQPLRTEITEAAMKLGPEVKLHFLMQKLSLLVTEAY 226
           KELAAAEFDGYC GEL+KVTLSGNQQP+RT+ITEAAM+LG E        KLS LVTEAY
Sbjct: 97  KELAAAEFDGYCAGELVKVTLSGNQQPIRTDITEAAMELGSE--------KLSQLVTEAY 156

Query: 227 QDAHQKSVQAMKQRMSDLAQSLGMPQGLSEGLK 260
           +DAH KSV AMK+RMSDLAQSLGMP GLSEG+K
Sbjct: 157 KDAHAKSVVAMKERMSDLAQSLGMPPGLSEGMK 180

[Close]

BLAST of Spg007646 vs. TAIR 10
Match: AT4G30620.1 (Uncharacterised BCR, YbaB family COG0718 )

HSP 1 Score: 196.1 bits (497), Expect = 3.6e-50
Identity = 116/171 (67.84%), Postives = 131/171 (76.61%), Query Frame = 0


Query: 90  NSMSNIVGVRISPYGPSKVEKNNRSLCVYGLF-GGKKENEGKSDDAPSKAGIFGNMQKLY 149
           +S  NIV +     G      NNRSL V GLF GGKK+N+   +D  SKAGI GNMQ LY
Sbjct: 27  SSRQNIVWLNRKQSG-----NNNRSLRVNGLFGGGKKDNK---EDGQSKAGILGNMQNLY 86

Query: 150 ETVRTAQQVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPLRTEITEAAMKLGPE 209
           ETV+ AQ VVQVEAVRVQKELA AEFDGYC+GEL+KVTLSGNQQP+RT+IT+AAM+LG E
Sbjct: 87  ETVKKAQMVVQVEAVRVQKELAVAEFDGYCQGELVKVTLSGNQQPIRTDITDAAMELGSE 146

Query: 210 VKLHFLMQKLSLLVTEAYQDAHQKSVQAMKQRMSDLAQSLGMPQGLSEGLK 260
                   KLSLLVTEAY+DAH KSV AMK+RMSDLAQSLGMP GL +GLK
Sbjct: 147 --------KLSLLVTEAYKDAHSKSVLAMKERMSDLAQSLGMPPGL-DGLK 180

The following BLAST results are available for this feature:

BLAST of Spg007646 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879412.1	3.7e-81	69.11	nucleoid-associated protein At4g30620, chloroplastic isoform X1 [Benincasa hispi...	[more]
XP_022932159.1	8.2e-81	69.11	nucleoid-associated protein At4g30620, chloroplastic-like isoform X1 [Cucurbita ...	[more]
KAG6587818.1	4.1e-80	68.73	Nucleoid-associated protein, chloroplastic, partial [Cucurbita argyrosperma subs...	[more]
XP_038879413.1	1.6e-79	67.95	nucleoid-associated protein At4g30620, chloroplastic isoform X2 [Benincasa hispi...	[more]
KAG7023441.1	6.5e-78	68.34	Nucleoid-associated protein, chloroplastic [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Spg007646 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82230	1.0e-49	71.90	Nucleoid-associated protein At2g24020, chloroplastic OS=Arabidopsis thaliana OX=...	[more]
Q9M098	5.1e-49	67.84	Nucleoid-associated protein At4g30620, chloroplastic OS=Arabidopsis thaliana OX=...	[more]
Q5N376	3.4e-13	44.55	Nucleoid-associated protein syc1054_d OS=Synechococcus sp. (strain ATCC 27144 / ...	[more]
Q8GMT0	3.4e-13	44.55	Nucleoid-associated protein Synpcc7942_0464 OS=Synechococcus elongatus (strain P...	[more]
Q8YM73	1.9e-11	42.73	Nucleoid-associated protein alr5067 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 /...	[more]

BLAST of Spg007646 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HN29	4.0e-81	69.11	nucleoid-associated protein At4g30620, chloroplastic-like isoform X1 OS=Cucurbit...	[more]
A0A6J1EW88	4.0e-81	69.11	nucleoid-associated protein At4g30620, chloroplastic-like isoform X1 OS=Cucurbit...	[more]
A0A0A0LWF8	9.2e-78	67.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G256760 PE=4 SV=1	[more]
A0A5A7SUZ8	1.6e-77	67.57	Nucleoid-associated protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3B9T2	1.6e-77	67.57	nucleoid-associated protein At2g24020, chloroplastic-like OS=Cucumis melo OX=365...	[more]

BLAST of Spg007646 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G24020.1	7.3e-51	71.90	Uncharacterised BCR, YbaB family COG0718	[more]
AT2G24020.2	7.3e-51	71.90	Uncharacterised BCR, YbaB family COG0718	[more]
AT4G30620.1	3.6e-50	67.84	Uncharacterised BCR, YbaB family COG0718	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036894	Nucleoid-associated protein YbaB-like domain superfamily	GENE3D	3.30.1310.10		coord: 140..256 e-value: 4.4E-27 score: 96.2
IPR036894	Nucleoid-associated protein YbaB-like domain superfamily	SUPERFAMILY	82607	YbaB-like	coord: 156..252
IPR004401	Nucleoid-associated protein YbaB/EbfC family	PFAM	PF02575	YbaB_DNA_bd	coord: 155..247 e-value: 8.6E-15 score: 54.8
IPR004401	Nucleoid-associated protein YbaB/EbfC family	PANTHER	PTHR33449	NUCLEOID-ASSOCIATED PROTEIN YBAB	coord: 88..254
None	No IPR available	PANTHER	PTHR33449:SF1	NUCLEOID-ASSOCIATED PROTEIN YBAB	coord: 88..254

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg007646.1	Spg007646.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding