Spg007121 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg007121
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Gibberellin-regulated family protein
Location	scaffold9: 47125456 .. 47127114 (-)
RNA-Seq Expression	Spg007121
Synteny	Spg007121

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAAAATTTAATTCTCTCTTTGAAACGTTTTGGCTTAGCTTTCTCTCTTCGTCTTCAATGGCCATTTCTGTGCTTTCTAAAGCTTTAATCTCTTCTCTTTTCATGTCCCTTCTCCTCATTTATTTGGTTGGAGCTGATGAAATAGTAAGCTTTAATTAATTAATTTAATTCTCGTGTATCACGAACTCAATTGTTGTATATGTTTGGTTCGCACTTTGTAAATATATAGCTGATTGAAATGGATTGCAGGTTAACTCAATTGATGGTGTTGCGGCTGATCCTGCTAAGGTTAAAAGCATCGGTAAAATATACTACCATGGATTCGTTTGATAACGTTCTCGTTTCTTGTTTTTCCTTTCTCATTTTTTGTTTATGGTTCTTGTTTTCTTTTTTTTTTTTAATAAAGAAAAATTTAACGTTTGATAGTTGTTTCTTGTTTTTTGTTATTTATTTTTTATTGGAAAAAGAAAAAAAAAACGTGTTGTTAATATATATTTTTTTATTTATTGCTCTTTTTTAATTTAAATTAAAAATGTAAAAATTTTACATGAAAATTGATTTTTAAAATTAAATATTCAAAAGTTTTAGATATTTATTATGTAGGTAAGAATGATAAAATAATACTTTTGTTTATGTTTTGAAAAAATTTAAAATAAGAAACAAAAAACTATTTTGTTGTAAGCTTTTAAAAAATGAGAAATAAGAAATAGAAAGAGAAACAACGGCCTCCTGATAAACTCATGCTTTTAGTATCATTTTTATGTTACTGTTTATCATTTATAAGAAAAACTTCTAAAATTGTATTAGATGATAAAAGATTTTTTTTTTTCCTCTTCTCTTCTCTTCTTCTACCTTTTCAAAATATAAAATGTATATACATAATTTTATTATTATTTTTTACTTATAGAATGTATGACGAAATATTTAAAATATAAACATAACATAATTTTTTAATAATTTAATTTAAGATAATTATTTTTCATGAAGAAATTTAATTTCTTAATTCTAAATTTATGAGAATAAGTAACAATAAATATTTAGCAAAAAATATTATGTCTTAATTAAATAAAAAAAAAAAAAACACTAACCAAATACATCGATTTAAAAAAAAAAAAAAAGTAAAAGTATTTATATGTTTCAGATTGTGGAGGAGCTTGTGCGTCGAGGTGCAAATTATCATCAAGGCCGAACCTTTGCAAGAGAGCTTGCGGCACGTGCTGTGCACGTTGCAGCTGCGTGCCGCCGGGCACTTTCGGCGGCTACGACTCCTGTCCTTGCTACGCCAGCATGACCACTCACGGCGGCCGGAGAAAGTGTCCCTAAATCATCACATCAATATAATTATTCAAAACTACTTAATTAATTATATTCTTCCTCAAATTATTAATAATTAAAGAGTTTCAACTTTCAAGAGTGTTTGAAATAAGAAATTAATGTAAAATAACGACAGATGTCTGGGAAAACCAGATTCTTCTCTTTCTCTTTTGTTTGTTTGTTGCGTTGTTGTGTGAATATTTACAAGATGTATGAATTATTCTGTACGTTACTTGGACTTCAAAGACGTGGCTCAGTTTGTGTGTAATAAAGCTAGAATTTGTGGATCAAAAGCTTTTTGAACCGACCATATATTCAATTTGGGTATCAGTTTTGACAAATAAT

mRNA sequence

ATGGCCATTTCTGTGCTTTCTAAAGCTTTAATCTCTTCTCTTTTCATGTCCCTTCTCCTCATTTATTTGGTTGGAGCTGATGAAATAGTTAACTCAATTGATGGTGTTGCGGCTGATCCTGCTAAGGTTAAAAGCATCGATTGTGGAGGAGCTTGTGCGTCGAGGTGCAAATTATCATCAAGGCCGAACCTTTGCAAGAGAGCTTGCGGCACGTGCTGTGCACGTTGCAGCTGCGTGCCGCCGGGCACTTTCGGCGGCTACGACTCCTGTCCTTGCTACGCCAGCATGACCACTCACGGCGGCCGGAGAAAGTGTCCCTAA

Coding sequence (CDS)

ATGGCCATTTCTGTGCTTTCTAAAGCTTTAATCTCTTCTCTTTTCATGTCCCTTCTCCTCATTTATTTGGTTGGAGCTGATGAAATAGTTAACTCAATTGATGGTGTTGCGGCTGATCCTGCTAAGGTTAAAAGCATCGATTGTGGAGGAGCTTGTGCGTCGAGGTGCAAATTATCATCAAGGCCGAACCTTTGCAAGAGAGCTTGCGGCACGTGCTGTGCACGTTGCAGCTGCGTGCCGCCGGGCACTTTCGGCGGCTACGACTCCTGTCCTTGCTACGCCAGCATGACCACTCACGGCGGCCGGAGAAAGTGTCCCTAA

Protein sequence

MAISVLSKALISSLFMSLLLIYLVGADEIVNSIDGVAADPAKVKSIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTFGGYDSCPCYASMTTHGGRRKCP

Homology

[Close]

BLAST of Spg007121 vs. NCBI nr
Match: XP_022982305.1 (gibberellin-regulated protein 1-like [Cucurbita maxima])

HSP 1 Score: 177.6 bits (449), Expect = 5.8e-41
Identity = 86/106 (81.13%), Postives = 98/106 (92.45%), Query Frame = 0


Query: 1   MAISVLSKALISSLFMSLLLIYLVGADEIVNSIDGVAADPAKVKSIDCGGACASRCKLSS 60
           MAIS LSKAL++ + MSLL+++LVGADE VNSI GVAA PA ++SIDCGGACASRCKLSS
Sbjct: 1   MAISGLSKALVTCVLMSLLVVHLVGADEKVNSIHGVAAHPANMQSIDCGGACASRCKLSS 60

Query: 61  RPNLCKRACGTCCARCSCVPPGTFGGYDSCPCYASMTTHGGRRKCP 107
           RP+LCKRACGTCCARC+CVPPGT GGY++CPCYASMTTHGGRRKCP
Sbjct: 61  RPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASMTTHGGRRKCP 106

[Close]

BLAST of Spg007121 vs. NCBI nr
Match: XP_022940222.1 (gibberellin-regulated protein 1-like [Cucurbita moschata])

HSP 1 Score: 176.8 bits (447), Expect = 9.9e-41
Identity = 85/106 (80.19%), Postives = 97/106 (91.51%), Query Frame = 0


Query: 1   MAISVLSKALISSLFMSLLLIYLVGADEIVNSIDGVAADPAKVKSIDCGGACASRCKLSS 60
           MAIS LSKAL++ + MSLL+++LV ADE VNSI GVAA PA ++SIDCGGACASRCKLSS
Sbjct: 1   MAISGLSKALVTCVLMSLLVVHLVAADEEVNSIHGVAAHPANIQSIDCGGACASRCKLSS 60

Query: 61  RPNLCKRACGTCCARCSCVPPGTFGGYDSCPCYASMTTHGGRRKCP 107
           RPNLCKRACGTCCARC+CVPPGT GGY++CPCYAS+TTHGGRRKCP
Sbjct: 61  RPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRKCP 106

[Close]

BLAST of Spg007121 vs. NCBI nr
Match: XP_023525231.1 (snakin-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 176.8 bits (447), Expect = 9.9e-41
Identity = 85/106 (80.19%), Postives = 98/106 (92.45%), Query Frame = 0


Query: 1   MAISVLSKALISSLFMSLLLIYLVGADEIVNSIDGVAADPAKVKSIDCGGACASRCKLSS 60
           MAIS LSKAL++ + MSLL+++LVGAD+ VNSI GVAA PA ++SIDCGGACASRCKLSS
Sbjct: 1   MAISGLSKALLTCVLMSLLVVHLVGADDKVNSIHGVAAHPANIQSIDCGGACASRCKLSS 60

Query: 61  RPNLCKRACGTCCARCSCVPPGTFGGYDSCPCYASMTTHGGRRKCP 107
           RP+LCKRACGTCCARC+CVPPGT GGY++CPCYASMTTHGGRRKCP
Sbjct: 61  RPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASMTTHGGRRKCP 106

[Close]

BLAST of Spg007121 vs. NCBI nr
Match: KAG6608594.1 (Snakin-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037911.1 Snakin-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 174.5 bits (441), Expect = 4.9e-40
Identity = 84/106 (79.25%), Postives = 97/106 (91.51%), Query Frame = 0


Query: 1   MAISVLSKALISSLFMSLLLIYLVGADEIVNSIDGVAADPAKVKSIDCGGACASRCKLSS 60
           MAIS LSKAL++ + MSLL+++LV ADE VNSI GVAA PA ++SIDCGGACASRCKLSS
Sbjct: 1   MAISGLSKALLTCVLMSLLVVHLVAADEKVNSIHGVAAHPANIQSIDCGGACASRCKLSS 60

Query: 61  RPNLCKRACGTCCARCSCVPPGTFGGYDSCPCYASMTTHGGRRKCP 107
           RP+LCKRACGTCCARC+CVPPGT GGY++CPCYAS+TTHGGRRKCP
Sbjct: 61  RPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRKCP 106

[Close]

BLAST of Spg007121 vs. NCBI nr
Match: XP_038899682.1 (gibberellin-regulated protein 1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 162.2 bits (409), Expect = 2.5e-36
Identity = 81/104 (77.88%), Postives = 94/104 (90.38%), Query Frame = 0


Query: 5   VLSKAL-ISSLFMSLLLIY-LVGADEIVNSIDGVAADPAKVKSIDCGGACASRCKLSSRP 64
           V+SK L I+ LF+S  L++ LV A+++VNSIDGVA + AK+++IDCGGACASRCKLSSRP
Sbjct: 2   VISKPLIIAYLFISSFLVHTLVEANKMVNSIDGVATNTAKIQNIDCGGACASRCKLSSRP 61

Query: 65  NLCKRACGTCCARCSCVPPGTFGGYDSCPCYASMTTHGGRRKCP 107
           NLCKRACGTCCARCSCVPPGT GGYD+CPCYASMTTHGGRRKCP
Sbjct: 62  NLCKRACGTCCARCSCVPPGTSGGYDACPCYASMTTHGGRRKCP 105

[Close]

BLAST of Spg007121 vs. ExPASy Swiss-Prot
Match: P46689 (Gibberellin-regulated protein 1 OS=Arabidopsis thaliana OX=3702 GN=GASA1 PE=2 SV=2)

HSP 1 Score: 127.5 bits (319), Expect = 9.1e-29
Identity = 62/101 (61.39%), Postives = 74/101 (73.27%), Query Frame = 0


Query: 6   LSKALISSLFMSLLLIYLVGADEIVNSIDGVAADPAKVKSIDCGGACASRCKLSSRPNLC 65
           +SKALI+SL +SLL++ LV AD     ++         K IDCG AC +RC+LS RP LC
Sbjct: 3   ISKALIASLLISLLVLQLVQAD-----VENSQKKNGYAKKIDCGSACVARCRLSRRPRLC 62

Query: 66  KRACGTCCARCSCVPPGTFGGYDSCPCYASMTTHGGRRKCP 107
            RACGTCC RC+CVPPGT+G YD C CYAS+TTHGGRRKCP
Sbjct: 63  HRACGTCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKCP 98

[Close]

BLAST of Spg007121 vs. ExPASy Swiss-Prot
Match: Q93X17 (Snakin-2 OS=Solanum tuberosum OX=4113 GN=SN2 PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 5.9e-28
Identity = 62/104 (59.62%), Postives = 78/104 (75.00%), Query Frame = 0


Query: 6   LSKALISSLFMSLLL---IYLVGADEIVNSIDGVAADPAKVKSIDCGGACASRCKLSSRP 65
           +SKAL +SL +SLLL   +  +  D++ ++    AA     K IDCGGACA+RC+LSSRP
Sbjct: 3   ISKALFASLLLSLLLLEQVQSIQTDQVTSNAISEAA--YSYKKIDCGGACAARCRLSSRP 62

Query: 66  NLCKRACGTCCARCSCVPPGTFGGYDSCPCYASMTTHGGRRKCP 107
            LC RACGTCCARC+CVPPGT G  ++CPCYAS+TTHG +RKCP
Sbjct: 63  RLCNRACGTCCARCNCVPPGTSGNTETCPCYASLTTHGNKRKCP 104

[Close]

BLAST of Spg007121 vs. ExPASy Swiss-Prot
Match: F4IQJ4 (Gibberellin-regulated protein 11 OS=Arabidopsis thaliana OX=3702 GN=GASA11 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.1e-25
Identity = 56/99 (56.57%), Postives = 67/99 (67.68%), Query Frame = 0


Query: 8   KALISSLFMSLLLIYLVGADEIVNSIDGVAADPAKVKSIDCGGACASRCKLSSRPNLCKR 67
           + L++SL +SLL++  V AD + ++             IDC   C  RC LSSRPNLC R
Sbjct: 5   RVLLASLLISLLVLDFVHADMVTSN---------DAPKIDCNSRCQERCSLSSRPNLCHR 64

Query: 68  ACGTCCARCSCVPPGTFGGYDSCPCYASMTTHGGRRKCP 107
           ACGTCCARC+CV PGT G YD CPCY S+TTHGGRRKCP
Sbjct: 65  ACGTCCARCNCVAPGTSGNYDKCPCYGSLTTHGGRRKCP 94

[Close]

BLAST of Spg007121 vs. ExPASy Swiss-Prot
Match: P46688 (Gibberellin-regulated protein 2 OS=Arabidopsis thaliana OX=3702 GN=GASA2 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 3.1e-21
Identity = 51/95 (53.68%), Postives = 63/95 (66.32%), Query Frame = 0


Query: 12  SSLFMSLLLIYLVGADEIVNSIDGVAADPAKVKSIDCGGACASRCKLSSRPNLCKRACGT 71
           S+L + L+++ L   +  V++ DG       VK IDCGG C  RC  SSR  LC RAC +
Sbjct: 6   STLVLLLIIVCLTTYELHVHAADGAKVGEGVVK-IDCGGRCKDRCSKSSRTKLCLRACNS 65

Query: 72  CCARCSCVPPGTFGGYDSCPCYASMTTHGGRRKCP 107
           CC+RC+CVPPGT G    CPCYAS+TTHGGR KCP
Sbjct: 66  CCSRCNCVPPGTSGNTHLCPCYASITTHGGRLKCP 99

[Close]

BLAST of Spg007121 vs. ExPASy Swiss-Prot
Match: P46687 (Gibberellin-regulated protein 3 OS=Arabidopsis thaliana OX=3702 GN=GASA3 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 2.0e-20
Identity = 51/95 (53.68%), Postives = 62/95 (65.26%), Query Frame = 0


Query: 12  SSLFMSLLLIYLVGADEIVNSIDGVAADPAKVKSIDCGGACASRCKLSSRPNLCKRACGT 71
           S+L + L+L  L   +  V++ +        VK IDCGG C  RC  SSRPNLC RAC +
Sbjct: 6   STLVLLLILFCLTTFELHVHAAEDSQVGEGVVK-IDCGGRCKGRCSKSSRPNLCLRACNS 65

Query: 72  CCARCSCVPPGTFGGYDSCPCYASMTTHGGRRKCP 107
           CC RC+CVPPGT G +  CPCYAS+TT GGR KCP
Sbjct: 66  CCYRCNCVPPGTAGNHHLCPCYASITTRGGRLKCP 99

[Close]

BLAST of Spg007121 vs. ExPASy TrEMBL
Match: A0A6J1J2A8 (gibberellin-regulated protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111481179 PE=3 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 2.8e-41
Identity = 86/106 (81.13%), Postives = 98/106 (92.45%), Query Frame = 0


Query: 1   MAISVLSKALISSLFMSLLLIYLVGADEIVNSIDGVAADPAKVKSIDCGGACASRCKLSS 60
           MAIS LSKAL++ + MSLL+++LVGADE VNSI GVAA PA ++SIDCGGACASRCKLSS
Sbjct: 1   MAISGLSKALVTCVLMSLLVVHLVGADEKVNSIHGVAAHPANMQSIDCGGACASRCKLSS 60

Query: 61  RPNLCKRACGTCCARCSCVPPGTFGGYDSCPCYASMTTHGGRRKCP 107
           RP+LCKRACGTCCARC+CVPPGT GGY++CPCYASMTTHGGRRKCP
Sbjct: 61  RPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASMTTHGGRRKCP 106

[Close]

BLAST of Spg007121 vs. ExPASy TrEMBL
Match: A0A6J1FJ01 (gibberellin-regulated protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111445908 PE=3 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 4.8e-41
Identity = 85/106 (80.19%), Postives = 97/106 (91.51%), Query Frame = 0


Query: 1   MAISVLSKALISSLFMSLLLIYLVGADEIVNSIDGVAADPAKVKSIDCGGACASRCKLSS 60
           MAIS LSKAL++ + MSLL+++LV ADE VNSI GVAA PA ++SIDCGGACASRCKLSS
Sbjct: 1   MAISGLSKALVTCVLMSLLVVHLVAADEEVNSIHGVAAHPANIQSIDCGGACASRCKLSS 60

Query: 61  RPNLCKRACGTCCARCSCVPPGTFGGYDSCPCYASMTTHGGRRKCP 107
           RPNLCKRACGTCCARC+CVPPGT GGY++CPCYAS+TTHGGRRKCP
Sbjct: 61  RPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRKCP 106

[Close]

BLAST of Spg007121 vs. ExPASy TrEMBL
Match: A0A6J1CCE1 (gibberellin-regulated protein 11-like OS=Momordica charantia OX=3673 GN=LOC111010205 PE=3 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 3.9e-35
Identity = 79/106 (74.53%), Postives = 88/106 (83.02%), Query Frame = 0


Query: 1   MAISVLSKALISSLFMSLLLIYLVGADEIVNSIDGVAADPAKVKSIDCGGACASRCKLSS 60
           MA SVLSK LI+ +FMSLL++  VGA E VN   G  ADP K+++IDCGGACA RCKLSS
Sbjct: 1   MANSVLSKPLITCVFMSLLVLCFVGAHEKVN---GTTADPTKIQNIDCGGACAMRCKLSS 60

Query: 61  RPNLCKRACGTCCARCSCVPPGTFGGYDSCPCYASMTTHGGRRKCP 107
           RPNLCKRACGTCCARCSCVPPGT GGYD+CPCYA +TT GGR KCP
Sbjct: 61  RPNLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP 103

[Close]

BLAST of Spg007121 vs. ExPASy TrEMBL
Match: A0A6A3BCU4 (Snakin-2 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110239pilonHSYRG00107 PE=3 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 2.0e-31
Identity = 72/101 (71.29%), Postives = 82/101 (81.19%), Query Frame = 0


Query: 6   LSKALISSLFMSLLLIYLVGADEIVNSIDGVAADPAKVKSIDCGGACASRCKLSSRPNLC 65
           +SKALI+SL +SLLLI LVGAD++V S     A P K   +DCGGACA RC+LSSRP+LC
Sbjct: 3   ISKALIASLLISLLLIQLVGADQLVTSASKGTAPPTK---MDCGGACAVRCRLSSRPHLC 62

Query: 66  KRACGTCCARCSCVPPGTFGGYDSCPCYASMTTHGGRRKCP 107
            RACGTCCARC+CVPPGT G  + CPCYASMTTHGGRRKCP
Sbjct: 63  NRACGTCCARCNCVPPGTAGNQEMCPCYASMTTHGGRRKCP 100

[Close]

BLAST of Spg007121 vs. ExPASy TrEMBL
Match: A0A6A2Y6S2 (Snakin-2 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111543pilonHSYRG00108 PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 3.5e-31
Identity = 70/101 (69.31%), Postives = 83/101 (82.18%), Query Frame = 0


Query: 6   LSKALISSLFMSLLLIYLVGADEIVNSIDGVAADPAKVKSIDCGGACASRCKLSSRPNLC 65
           +SKALI+SL +SLLL+ LVGAD++V S     A P +   IDCGGACA+RC+LSSRP+LC
Sbjct: 3   ISKALIASLLISLLLVQLVGADQLVTSASKGTAPPTE---IDCGGACAARCRLSSRPHLC 62

Query: 66  KRACGTCCARCSCVPPGTFGGYDSCPCYASMTTHGGRRKCP 107
            RACGTCCARC+CVPPGT G  + CPCYAS+TTHGGRRKCP
Sbjct: 63  NRACGTCCARCNCVPPGTAGNQEMCPCYASLTTHGGRRKCP 100

[Close]

BLAST of Spg007121 vs. TAIR 10
Match: AT1G75750.2 (GAST1 protein homolog 1 )

HSP 1 Score: 131.3 bits (329), Expect = 4.5e-31
Identity = 65/101 (64.36%), Postives = 76/101 (75.25%), Query Frame = 0


Query: 6   LSKALISSLFMSLLLIYLVGADEIVNSIDGVAADPAKVKSIDCGGACASRCKLSSRPNLC 65
           +SKALI+SL +SLL++ LV ADE     +G A      K IDCG AC +RC+LS RP LC
Sbjct: 3   ISKALIASLLISLLVLQLVQADENSQKKNGYA------KKIDCGSACVARCRLSRRPRLC 62

Query: 66  KRACGTCCARCSCVPPGTFGGYDSCPCYASMTTHGGRRKCP 107
            RACGTCC RC+CVPPGT+G YD C CYAS+TTHGGRRKCP
Sbjct: 63  HRACGTCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKCP 97

[Close]

BLAST of Spg007121 vs. TAIR 10
Match: AT1G75750.1 (GAST1 protein homolog 1 )

HSP 1 Score: 127.5 bits (319), Expect = 6.4e-30
Identity = 62/101 (61.39%), Postives = 74/101 (73.27%), Query Frame = 0


Query: 6   LSKALISSLFMSLLLIYLVGADEIVNSIDGVAADPAKVKSIDCGGACASRCKLSSRPNLC 65
           +SKALI+SL +SLL++ LV AD     ++         K IDCG AC +RC+LS RP LC
Sbjct: 3   ISKALIASLLISLLVLQLVQAD-----VENSQKKNGYAKKIDCGSACVARCRLSRRPRLC 62

Query: 66  KRACGTCCARCSCVPPGTFGGYDSCPCYASMTTHGGRRKCP 107
            RACGTCC RC+CVPPGT+G YD C CYAS+TTHGGRRKCP
Sbjct: 63  HRACGTCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKCP 98

[Close]

BLAST of Spg007121 vs. TAIR 10
Match: AT2G18420.1 (Gibberellin-regulated family protein )

HSP 1 Score: 116.3 bits (290), Expect = 1.5e-26
Identity = 56/99 (56.57%), Postives = 67/99 (67.68%), Query Frame = 0


Query: 8   KALISSLFMSLLLIYLVGADEIVNSIDGVAADPAKVKSIDCGGACASRCKLSSRPNLCKR 67
           + L++SL +SLL++  V AD + ++             IDC   C  RC LSSRPNLC R
Sbjct: 5   RVLLASLLISLLVLDFVHADMVTSN---------DAPKIDCNSRCQERCSLSSRPNLCHR 64

Query: 68  ACGTCCARCSCVPPGTFGGYDSCPCYASMTTHGGRRKCP 107
           ACGTCCARC+CV PGT G YD CPCY S+TTHGGRRKCP
Sbjct: 65  ACGTCCARCNCVAPGTSGNYDKCPCYGSLTTHGGRRKCP 94

[Close]

BLAST of Spg007121 vs. TAIR 10
Match: AT4G09610.1 (GAST1 protein homolog 2 )

HSP 1 Score: 102.4 bits (254), Expect = 2.2e-22
Identity = 51/95 (53.68%), Postives = 63/95 (66.32%), Query Frame = 0


Query: 12  SSLFMSLLLIYLVGADEIVNSIDGVAADPAKVKSIDCGGACASRCKLSSRPNLCKRACGT 71
           S+L + L+++ L   +  V++ DG       VK IDCGG C  RC  SSR  LC RAC +
Sbjct: 6   STLVLLLIIVCLTTYELHVHAADGAKVGEGVVK-IDCGGRCKDRCSKSSRTKLCLRACNS 65

Query: 72  CCARCSCVPPGTFGGYDSCPCYASMTTHGGRRKCP 107
           CC+RC+CVPPGT G    CPCYAS+TTHGGR KCP
Sbjct: 66  CCSRCNCVPPGTSGNTHLCPCYASITTHGGRLKCP 99

[Close]

BLAST of Spg007121 vs. TAIR 10
Match: AT4G09600.1 (GAST1 protein homolog 3 )

HSP 1 Score: 99.8 bits (247), Expect = 1.4e-21
Identity = 51/95 (53.68%), Postives = 62/95 (65.26%), Query Frame = 0


Query: 12  SSLFMSLLLIYLVGADEIVNSIDGVAADPAKVKSIDCGGACASRCKLSSRPNLCKRACGT 71
           S+L + L+L  L   +  V++ +        VK IDCGG C  RC  SSRPNLC RAC +
Sbjct: 6   STLVLLLILFCLTTFELHVHAAEDSQVGEGVVK-IDCGGRCKGRCSKSSRPNLCLRACNS 65

Query: 72  CCARCSCVPPGTFGGYDSCPCYASMTTHGGRRKCP 107
           CC RC+CVPPGT G +  CPCYAS+TT GGR KCP
Sbjct: 66  CCYRCNCVPPGTAGNHHLCPCYASITTRGGRLKCP 99

The following BLAST results are available for this feature:

BLAST of Spg007121 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022982305.1	5.8e-41	81.13	gibberellin-regulated protein 1-like [Cucurbita maxima]	[more]
XP_022940222.1	9.9e-41	80.19	gibberellin-regulated protein 1-like [Cucurbita moschata]	[more]
XP_023525231.1	9.9e-41	80.19	snakin-2-like [Cucurbita pepo subsp. pepo]	[more]
KAG6608594.1	4.9e-40	79.25	Snakin-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037911.1 Snakin-2...	[more]
XP_038899682.1	2.5e-36	77.88	gibberellin-regulated protein 1-like isoform X1 [Benincasa hispida]	[more]

BLAST of Spg007121 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P46689	9.1e-29	61.39	Gibberellin-regulated protein 1 OS=Arabidopsis thaliana OX=3702 GN=GASA1 PE=2 SV...	[more]
Q93X17	5.9e-28	59.62	Snakin-2 OS=Solanum tuberosum OX=4113 GN=SN2 PE=1 SV=1	[more]
F4IQJ4	2.1e-25	56.57	Gibberellin-regulated protein 11 OS=Arabidopsis thaliana OX=3702 GN=GASA11 PE=3 ...	[more]
P46688	3.1e-21	53.68	Gibberellin-regulated protein 2 OS=Arabidopsis thaliana OX=3702 GN=GASA2 PE=2 SV...	[more]
P46687	2.0e-20	53.68	Gibberellin-regulated protein 3 OS=Arabidopsis thaliana OX=3702 GN=GASA3 PE=2 SV...	[more]

BLAST of Spg007121 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J2A8	2.8e-41	81.13	gibberellin-regulated protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111481179...	[more]
A0A6J1FJ01	4.8e-41	80.19	gibberellin-regulated protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC1114459...	[more]
A0A6J1CCE1	3.9e-35	74.53	gibberellin-regulated protein 11-like OS=Momordica charantia OX=3673 GN=LOC11101...	[more]
A0A6A3BCU4	2.0e-31	71.29	Snakin-2 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110239pilonHSYRG00107 PE=3...	[more]
A0A6A2Y6S2	3.5e-31	69.31	Snakin-2 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111543pilonHSYRG00108 PE=3...	[more]

BLAST of Spg007121 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75750.2	4.5e-31	64.36	GAST1 protein homolog 1	[more]
AT1G75750.1	6.4e-30	61.39	GAST1 protein homolog 1	[more]
AT2G18420.1	1.5e-26	56.57	Gibberellin-regulated family protein	[more]
AT4G09610.1	2.2e-22	53.68	GAST1 protein homolog 2	[more]
AT4G09600.1	1.4e-21	53.68	GAST1 protein homolog 3	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003854	Gibberellin regulated protein	PFAM	PF02704	GASA	coord: 47..106 e-value: 5.0E-21 score: 74.6
None	No IPR available	PANTHER	PTHR23201:SF67	SNAKIN-2-LIKE	coord: 6..106
None	No IPR available	PANTHER	PTHR23201	EXTENSIN, PROLINE-RICH PROTEIN	coord: 6..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg007121.1	Spg007121.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009740	gibberellic acid mediated signaling pathway
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane