Spg007062 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg007062
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Retrotrans_gag domain-containing protein
Location	scaffold9: 48004269 .. 48015087 (-)
RNA-Seq Expression	Spg007062
Synteny	Spg007062

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTCGACCAAGCAGTTGTCGAAAACCCATGTGGAACGTTTAGTAGAGATCGAAGAGCAGTTACTCTACTTGAGGGAAGTCCCTGATGCTATTCGGTTCGTGGAATCTCGGCTGGCTGAGATTTCGACTAAAGCCGACAAAGTTGATGCGGTAGCTGGCCGCGTGGATGGGATGCCCATCCAAGAATTGATGATGAGGGTTGAGAACCTTGAAAGTAAAGCCACCCGACCTGGTAGCTACGAGCGTGGTGATAGCTTGTCGGGCTCTGCTGCCCTGATGGAGGAGCATGTCGATGGCTTAGACAGCTCCCAGAAAGCGATAGTCCAGATGGTTACGGACTTATCAGACGATGTGAAAGCTGCCCTCGACGTGGTCAGGGCCGGAGTGGCGGATCTGAGCACCAGATTAAACCTCACGATGAGAGCAGTGGGGAACCAAGCCCCAGCAGGGGGTGCGGTCCAGTTCAACATAGTTAAAGTACCCGAGCCTAAGCCCTTCTGTGGGGTTCGTGATGCAAAGGCTCTCGAGAACTTCATTTTTGATCTTGAACAATACTTTCGAGCGACAAATACCGTGACCGAAGAGTCAAAGATAACATTGGCTACGATGCATCTTGCTGATGATGCAAAGTTGTGGTGGAGGTCCCGGTTCATGGACATCCAAGAGGGTCGTTGAACCATAGATAGTTGGGAAAAATTGAAACAGGAACTTCGTTCTCAGTTTTTCCCCGAAAATGTGGAAATTTTGGCGAGGCGGAAGTTGAGAGAGCTCAAACATACAGGCAACATCCGAGATTATGTGAAACAGTTCTCCGGATTATTGTTGGACATTCGCGATATGTCAGAGAAAGACAAAGTTTTCTGTTTTGTCGAAGGATTGAAGCCGTGGGCAAAATCCAAACCGTATGAACAGCGGGTGCAAGACCTTTCTACTGCCTATGCAGCGGTAGAGCGACTGTTTGACCTCAGTAATGATCAGTCCCAAGACGTGAGACGGAATCCGGGCCCTTCTAATGGAGGAAACAAAAATAATCGACCAGGCTCCCCCAAAAGTGGGGGAGGAGACAGACAAGGAGGGGGAGATCGTAGACCCTTCCAGCAGAGAGGCGGAAACTCGTGGCGAGGGCCACCCCAACAGAACAATTACTATCAGAGGCCCCTTTCGTGTTTCATATGTAAGGGGGCCCATCGGGTGTCTGATTGCCCGAAGCGGGTAGCCCTCCAAGCTTTTCAAGCCACTTTTGACACCGATCCCGAAGTCGAAGCGGTAGCCGTAGAGACTGAGGGACCACATGCTGAAGTTGAGAACAACCCTTGAATGGGGGCACTGAAATTCCTCTCCGCCCTCCAGAAGAAAGTGGGGGAGACCAAAGAGCCATTAGAAAGAGGACTCATGTACGTTGATGCATGGGTGAATCACAAGTCGGCCAAGAGCACGATGGTCGACTCGGGAGCCACCCATAACTTTATGACAGAGACAGAAGCACGTCGGCTTAACTTGCGATGAGACAGGGACACAGACAAAATGAAAGCTGTCAATTCGGCAGCCCTACCCATTATGGGGATAGCCAAGAGGGCCACGGTGAAGCTGGGTGATTGGAGTGGCCAAGCTGATTTCGTGATCGTCAAGATGGATGACTTTGACATTGTGTTGGGGATGGAGTTCCTCCTCGAACACAAGGTGATACCGAAGCCCCTGGCAAAATGCGTAGTGATCACGGGATCCAGCCCCACTGTCGTCCAGGCCAATATCAAGCAACCAGGAGGAATAAGGATGATCTCAGCCCTTCAGCTGAAGAAGGGCCTTGCCCATGACGAACCCACCTTTATGGCCATCCCCATAGTGACAGATGAGAGTGAGAAAGAAACAGTCCCCGAAGGGATCCAACGAGTTCTAGAAGAATTTTGCGGTGTCATGCCTGACAGTTTACCAAAGAACTTACCTCCGAGGAGAGGGATTGATCACGAAATTGAGTTGTTGCCTGGGGCAAAGCCGCCCGCCAAGAATGCCTACCGTATGGCACCTCCCGAGTTAGCGGAACTTCGAAAGCAACTTGATGAGTTATTGAATGCTGGATTCATCCGCCCAGCAAAAGCTCCTTATGGGGCCCTAGTCTTGTTCCAGAAGAAGAAAGACGGAAGTTTACGTTTGTGTATTGATTATTGAGCATTGAACAAACTGACTGTCCGAAACAAGTATCCTCTCCCAATCATAACAGATTTGTTCGACCGCCTCCATGGGGCGAAGTACTTCTCGAAGTTAGATCTGAGTTCAGGATACTACCAAGTCCGCATTGCAGAAGGAGACGAGCCGAAAACAACCTGTGTCACCCGCTATGGGGCTTTCGAATTGCCCTTTGGCCTTACAAACGCTCCGGCCACCTTCTGCACCCTGATGAATCAAGTCTTTCATGAATATCTCGACAAATTTGTGGTCGTCTATCTAGATGACATCGTTGTGTATAGCCCGACCTTGGAAGAACATCAGGTTCACCTGCGACTTGTCTTTGAAAAGTTGAAGCTGAATCAGCTGTATGTAAAGAGAGAGAAGTGCTCCTTCGCGCAGAAACGCATCACTGAGGGCTTGGAGACAATACCTTTTGGGAGCCAAGTTTGTAGTCAAGACGGACAATAGCTCCATCTGCCACTTCTTCAACCAACCAAGATTGTCATCCAAACAGGCGCGATGACAAGAACTTCTCGCAGAGTTTGACTTTCAGTTCGAACACAAGCCTGGTAAAGCTAACCAAGCGGCGGACGCTTTGAGTCGGAAGAGTGAACATGCGGCCCTGTGCATGTTAGCCCACTTGAAAGTGAGTAGGCTGAGTGGAACCGTCCGCGAGACAATTAAGGAACATTTGAAGAACGACACCGCAGCCCAAGCAATAATGAAGTTGGCTGAAGAAGGAAAGACCCGTCAGTTTTGGGTCGAAGACGGTTTGCTCTTAACCAAGGGCAACCGCCTGTATGTCCCTCGTTCGGGGAACCTCAGGAAGCTCTTAATCGAAGAATGCCACGATACACCGTGGGCCGGCCACTTTGGGTGGCAACGAACTTATGCGCTCGTCAAGCAGGGGTATTTTTGGCCGAGCCTTCGAGACGATGTAATGTTGTTTACAAAGACCTGCCTCGTGTGCCAGCAAGACAAGGTGGAACGAGCCAAGATAGCAGGGTTGCTGGAACCCCTGCCCGTCCCCTCAAGACCATGGGAGAGTGTATCTCTCGATTTCATCACTCATCTCCCTAAGGTTGGAGAATTTGAATCCATTCTCGTGGTCGTTGACCGATTTTCGAAGTACGCCACGTTCATTCCGACTCCGAAGATGTGCTCAGCTGAGATGGCGGCACAATTGTTTTTCAAAAATGTTGTCAAGTTATGGGGTGTACCCGAGAGTATCATTAGTGATCGAGATGCTCGATTCACTGGAACATTCTGGACGGAATTATTTAGATTACTGGGCTCTCACCTAAATATTTCCTCCAGCTACCACCCGCAGACAGATGGCCAGACAGAACGATTCAACAGTATGCTCGAGGAGTACTTGCGTCACTTTATTGACGTCCGACAGAAGAATTGGGCTGAGATGCTTGATGTTGCTCAGTTCAGTTTCAACTGCCAAAAGAGTTCAGCAACAGGAAAAACTCCCTTCGAGTTAGTATGCGGAAGACAGTCATTGATGCCGCATTTAATTGACCATCCTTACGCGGGGAAGAGTCCCCAAGCTTACAACTTCACCAAGGAGTGGAGACAGACATCAGAGATAGCACGAGCGTACTTAGAGAAGGCATCGAAGCGTATGAAAAAATGGGCCGATCAGAAACGACGACCAATGGAATTCCAAGCGGGAGACAGAGTTCTGATCAAGCTGAGACCAGAACAGATCTGGTTCAGAGGGAAGAGAGACCAACGCCTTGTCCGAAATACGAAGGCCCCGTCGAAGTGATCCAGAAGGTCGGTAAGACATCTTATAGGGTTCAGTTACCCTCGTGGATGAAGATTCACCCTGTCATCCACGTTAGTAACTTGAAGACCTACCATCCTGTCCTAGAAGACTCCGAGCGCAATGAAGTGACGCGGCCCCTGGTCACCATGCAGAACCTGAATGACAAAGGAGTAGAAGAGATTTTGGCAGACAGGATTCGTCGCACAGGTAAACCTCGTCGAGACGTCCAAGAGTTCCTGGTGAAGTGGAAAGGGCTCCCAGATGCTGAGATTAGTTGGGAGCGAGCTGAAGACTTGAAGACGGCTGCTATCAAGATCGCAGAGTTCGAGCAGCGTCGGTTGACAGGGACGTCAACCATTTAAGTGGGGGAGAGTGTCACGGTCATGTTTGTCCAAGGCGTGTTGCCCATGGCCGCATGCCCATGACAACCCTTTCCCCTCATGCTTTCATTATATGTATTTCCTTTGTATCGCTTGTTTATTTTTCCTTGCATTTCTCAAGTGTATGACTCCTCGTGATTTTCATGTTCAAGCCTGCCAAGGCTAAAATGCTTAATAATATACTATAGGGGGGTACGACTAGTTGTCAAACCTTCCTACCCGAGAGTTGTATGCTATCAAGCTGTTGTTGTCCCTTTGCTTTCTTGATAGTCTGTGCAACTAATATTCTTACAAAATGTTTTCAACCGTTTTCCAAAGCTTTTTCTCTAACCCCGTTTTCTAAAACCGTTTTCCAAGAACAGGGGTGGAGGTTGCGAGATAGACCCTTTGTGCCACCGGCAATCCGAAACCGAGTTGGCTGACTTACTCGTGGGCGAGAGTAAGTGCCGCACAATCGCTTGCGTGTTTGAAAGAGTGCGATTGTGACACTATGCACCCCCACATGGTTTCCAAGCCATGCCCGCACACTCACATGATTTCTACGTCACGCTCCGCATTCACATCCCACACGTGATTTCCGCGACACGCTCCGCAAACCCACCCAACACATGTATTACGCGCCATGCGCAGTGCCACTCACATGTGATTTTCGCATCACACTCCGCACTCATACCCACACATGATTTCCGCGTCACGATCCACAAACACACCCAACACATGATTTACGCGTTATGCTCCGCCTCTCCCCAATGAACATATACTATGCAGACACGACTCACATGCAACATAGCCCACCAACACCCATACCTCAGGCTCATGAATTAAACAAAGCAGCATACTTATGAACTATAAAGCACGGACACCTCTAAAATGGCGAAGTGTCAGTGTCCGACACTTCGACACGTGTCCGACACGCCACGTGGCGTGTTTTTTTTTTTTTTTTTTTTAAAAAATTTTCCGACACGTTCCGCGTCACGCTTCGCAAACCCACCCAACACATGAATTACGCGCCATGCGTAGCGCCACTCACACGTGATTTCTGCGTCACACTCCGCACTCACACCCACACGTGATTTCCACGTCACACTCCGCACACAAACCCAACACATATTTACGCGTTATGCTCCGCCTCTCCCCAATGAACATACACTATGCAGACACAACTCACATGCAACATAGCCCACCACCAACAATACCTCATGCTCATGAATTAAAGAAAGCAGCATACTTATGAACTATAAAGCACGAACACCTCTAAAATGGCGAAGTGTCAGTGGCGGACACGTGTCCGACAAGCCACGTGGCCTGTCTTTTTTTTTTTTTTGTTTTTTTTTTTAAATTTTCTGACACGCCTCCGACACGCGAGGTACATGCCTCTGACACACGAGGGACACGTTTTAAAAAAAAAAGGGCCGTTTTTTAAAATTTAATCACCGTTTAAAATAAACCCACTCATTCACAACCCACCCACGGTTAAAAAAAGAGCCATTTTGTTTTTTTTTAATTTTTTTAATTTTTTTTATTTTTAATCTGCCCTAGGTCATTTTTAAGTCTTCTATCATCTTCCCCACGATATTTTTGGTCTTCTACACAATTTCTTCTCCACTATTCTATGAGTTGAGAGTGAGACCAAGATAGAAGCAACCAAGTCTCGGCCTCCACGCAATAAAGCTGTTCGGCGTTCACCATCACGTCACGACGGGCCGGTGGCTTCTAGTTCTCAAGTTCTTGTTTTGATGTTTAAATATAGGGGAACACACAAAAAAATTAACGTGTCCCCAACGTGTCGTGTCCTACTTTTTTGGAAATTGACGTGTCGCCGTGTCCGTGTCGTGTGTCAGTGTTTGTGCTTCTTGGCTTATGAATCAACAAAGCAACATGCTTAAGAATCAAACAAAGCTTCGTGCTTATTCACATAGTGAGCTACATACATATTAACACAACATATAATAACAAGCAAGTAAAGCAAACGACATGCACAAACAAACAAACAAGCCCATCCAAATAGAAACTACTTTCAAATAGCTTAAGAGCGCTCCTAAATCCAACTAACACTTGTTGGAAAAAATTAGAATAGGCTCTAAGCGGACCTACGAACACAATAAAGACCTTATAGAGGTTAGGGAACAACCTAACAACTTTCCCAACACTTAACATAAGTTTAAAGGGACCTAAAACATGCTGTAAGGTGCTGAAACTTACCGAACAGGGATGGGAACCTTGTTGGAATTAATCGATCAGCACTGAAATACCTTGAATAAATGTTGTCCGAAGTTCGAATTGGGTCCAAACTACACTTTAAAGAGCACTAATGGTTATAAACTATTCTAAAGCTAACTAAGGCAGTTTCTAAAGACTTTAAGGCCGCTGGAACTTACCGATAAACACCAAACAGTGATGATTACGTGTTGTACAGTGTCCAAAATGGCCAGAACCTGCAATTTAGGAGGCGATACAGAGTGGGTAACTCAGATTAACGCTTTTTGGGTCATGGGTAACTTAAATTCGATGCCAATAAGGAATGGGTTAGTGCCAAAACTTACCGAAATCGCTGAAACGTAGAAGAATTGTGCTGGTATTCACAGATTGAAGCCAAACAGAGGAGAGACAACGTTGAGCAGGGCTGAAACCGCACTGATTTCACACTGGATGAAGGCAAAACCACAAGAAAAAGAATTCCGAGTAGTTAATCACACGATTCCTGACTAAAATGGGAGGGGGTTTACCCTTGCTCACCCAACAAAGAACGAAAGCGAGGGAAAAAGGAGACTTACACAAATATATAACAAACAAAAAGGAAAGACAAATAGAACAAATTTTCTCATAACAAAGTTTATGGAAACAGTAAGGAAATTGATAAATAATGGAACATGAATAGCTACCCATAGACTATTAAATGAAAGAAGGTAAATTCAATAGATTCCCATTCACAGATTTTAAACAGGTAGAATATGAAATTTTACAACACACATGAAAGTTCAAAAGATTTAATGGAAACTTTGAAATTTCAATGACTAAAATTGTAATTTAACAAATCTAACACTGAATACAACACTAGAATGGTAATTTGAATAATAGGGTAAAATGTAATTTTGATGCCTAAGTTTTGGGTTAGGATTTTATTTAGCCCTTAAGTTTAATAGTTTGACAGTTTAGTCCCTAACTTTTGAAAAAGGATGAGACATTTAACTTGGTGACTAAATTTTGTATTTTAAATGAGATACAAAATATATTGATTTCAAATGTATTTAGGGTCAACGTGAACATAGTTCAACTCACATAAAGTTTGTACTAATGTCCAAGAGGTCCGTGCTTCAAAACCCCCACCACCTCACATGTTAAAAAAAGAAGGAAAAAACACACTTTTGGTCCCTGAGGTTTGGGTTAGGTTTCATTTTGGTCCCTAAGTTTTCAAACTCGACAATTTAGTCCCTGAGGTTTGAATTTCATTTCATTTTAGTCTCTTCATCCATTTCATTTCAAACTCGACAAAAAACACACTTTCTGTTAGGAGTTAACGGAAAAATAGATGAAGGGACTTAAAATGAAACGAAATCCAAACCTCAGGGACTAAATTGTCGAGTTTGAAAACTCAGGGACCAAAATGAAACCTAACCCAAATCTCAGAGACCAAAAGTGTATTTTTCCCAAAAAAGAATGGAAATATTACCACAACTATCCGTGAAGCTGAACAAAGAAGAATTTGTTAAGCCTCCAATTATCTTGCAATATGTACGAAGGGGTAAAAAGGGAAATGCAGCTCCAACATTCCCTAAAGAATCCGTTTCGTTTAGGAGGCAGTGCGCGAGGAGGGGACCAGCTGTGGCATTGTTTTCTGTTATGCCTACCTTACATATATAGTCTACTTTTGTGTTAGTTGTTTTTATGCTTGTTTTCGTTGATAACTGAAAGCTAGAGAGAGATGAGAGATTACAGGCCCTCTCAAATTGGTCGGGAGTTTATGCATCGTTTTGGCTCTTTCTCTGATTATCAATATATCATTGTGAGGATACCTCACAACTTGGTATCAGAGCACGTTCACCCTGGGAAGGTTAGGAAAAATGACACAGAAAATGATTGAGGTGCAGCTCGATGTGACGGACCCTGATCTCGAAGGAATCGAGAAAGAAATGCATAAGTTACCTGCGATAGAAAGGAACCCGACGAAGCTTTCACATACTTCTGAGGAGACGGTCAAGGCCTTGGCGACGATTGCAAGTGAAATGGTCCATTGGCGAACGAAACCGTCGTCTTCTGACGTCACGGAGGCATTGGGTTCGAAAGGAAAGGAAAGAGAAGGCAGTGCGATGAAGGAAACGGAAAACCAAGGCGTTGACGCATCTCCTTCGGTTACGTGTGGTAGTGTGAAGAAGGGGGCTATCGGAGGGTCTGGTAGCGAACGTCTTAAGTTCAAGAAGGTGGAGATGCCTGTTTTCGGAGGTGATGACCTGGATTCGTGGCTCTTCAGAGACGACAGGTATAGGGGATTGGAGGAACGGGAACCTTTCGCGGGATGGCAGGACTTCAAAATCCGGTTACTGGAGAGGTTTCGAGTTGCCCATTAGGGAAGTGTCCTGGCCAGGTTTTTAGCCGTTAAGCAAGAAACCACGGTGAGAGAGTATTGGAAAGCTTTTGAGCTATTAATGGCGCCGTTACCGAATTTATCAGAAGATGTCCTGAAAACCACCTTCTTAAACGGTCGCGATTCGGTCATCAAGGCGGCGGTGCAATGCTGGGAAACCAGTGGGCTTCATACAGTGATGAAAATGTTGGGTTTAATGTCCTAAAACTCGTAGTTTTGTAAAACATTAAACATATTCTATTTTCAATAAAGATGTTGTTGAGATTATTCAGTAAAGATGTTATTGAATATGTAAATTGCAAAATATTTAACCTAAATCCAATAAACTAAGACCCTTTGCTATAATATGAATACTCGAACTATATGTAGAGACATAAAATTGGATCAAGTTCAAGTATATAGCCAAAACGGTCTATAGTATAAGGATAGGGTTGGGTACCCTATCCTGGGGACACTATGGACGCGACATTGTTGGAACATCTTGAAGTCGGATACAGTAGAGGTGTTCCAAGAATTTTTCCAAAACGGCATTAATAATAAGAGAACCAACGAAACCTACATATGTCTAATTCCTAAGAAGAAAAAAGCCTCCAAAGTAAGGGACAATAGACAAATATGCTTGATCACCTCTCCTTACAAGCTGATTGCTAAGGTGCTGGCCGAAAGGTTAAAAAAAGCCCTTCCGCTAACCATCAGTGGCTGCCAGGCAGCCTTCGTTCAGGGAAGACAAATTATTGATGCTATTTTAGTAGCAACTAAAGCAGTGGAAGATTATAGAGTTAGAAATGAGAAAGACTTCTTACTCAAAGTAAATCTTGAGAAGGCTTATGACATCGACTGACTCAGTTTTCAAACCGACCGACCGACGTCGATTTGGTCGGTTTTTGGTGGTAGGGTCGGTTTTCAGAGATCCTTTGAACACCCCTAGGCCAGGGTAATGCTAAACTGTTAGTCCCACAATAGTCAAAACTTATGTTAGAAGGAGTAAAAAGGATTTCACCTTCAGTGGGGCTGTGACCGTTTTTAGCTGTTGGAGGAAAAGTTCTATTGTAAGCTTATCTTTTTTATTTAAGGTTGTTTAGTGTTTGTTGTTGCTTCTTATGTTATGTTATGTTATGTGTTAGCTTGTATCTTGGATACGAAGAAGGAGAGAACCACCCCCTCGGGAGGCGTGGATTTGCTTGTACTCTCTGCTGTGTAATCAACTATTTTGTGAATTAATACTAGTTGTGAGGAAGATACCTCACATAAACTATTCACAAACGTGAAGATTGAAGAAATGGTAGTGGTGTAGTTAGTAGATGACTAGGATGCCTTGCTTCTAATGCCATAAACTCAAAAGTATGGTCCCTCTTTGGAGGAATGTTATTGGATTTCTTGAATGGAAATATTACCACAACTAACCATGAAGCTGAACAAAGAAGAATCTGTTAGGCCTCCAATTATCTTGCAATATGTACGAAGGGGTAAAAAGGGAAATGCAGCTCCAACATTCCCTACAAAATCCGTTTCGTTTAGGAGGTAGTGCGCGAGGAGGGGACCAGCTGTGGCATTGTTTTCTATTATGCCTACCTTATATATATAGTCTACTTTTGTGTTAGTTGTTTTTATGCTTATTTTCGTTGATAGCTGAAAGCTAGAGAGAGAGGAGAGATTACTGGCCCTCTCGAATTGGCCGGGAGTTTATGCATCGTTTTGGCTCTTTCTCTGATTACCAATATATCATTGTGAGGATACCTCACAACTTGGTATCAGAGCACGTTCACCCTGGGAAGGTTAGGAAAAATGACACAGAAAAGGATTGAGGTGCGGCTCAATGTGACGGACACTGAGCTCGAAGGAATCGAGAAAGAAATGCATAAGTTACCTGCGATCGAAAGGAACCCGCGCGAAGCTTTCGCAAACTTCTGA

mRNA sequence

ATGTCGTCGACCAAGCAGTTGTCGAAAACCCATGTGGAACGTTTAGTAGAGATCGAAGAGCAGTTACTCTACTTGAGGGAAGTCCCTGATGCTATTCGGTTCGTGGAATCTCGGCTGGCTGAGATTTCGACTAAAGCCGACAAAGTTGATGCGGTAGCTGGCCGCGTGGATGGGATGCCCATCCAAGAATTGATGATGAGGGTTGAGAACCTTGAAAGTAAAGCCACCCGACCTGGTAGCTACGAGCGTGGTGATAGCTTGTCGGGCTCTGCTGCCCTGATGGAGGAGCATGTCGATGGCTTAGACAGCTCCCAGAAAGCGATAGTCCAGATGGTTACGGACTTATCAGACGATGTGAAAGCTGCCCTCGACGTGAACAGGGGTGGAGGTTGCGAGATAGACCCTTTGTGCCACCGGCAATCCGAAACCGAGTTGGCTGACTTACTCGTGGGCGAGAGATACCTCACAACTTGGTATCAGAGCACGTTCACCCTGGGAAGGTTAGGAAAAATGACACAGAAAATGATTGAGGTGCAGCTCGATGTGACGGACCCTGATCTCGAAGGAATCGAGAAAGAAATGCATAAGTTACCTGCGATAGAAAGGAACCCGACGAAGCTTTCACATACTTCTGAGGAGACGGTCAAGGCCTTGGCGACGATTGCAAGTGAAATGGTCCATTGGCGAACGAAACCGTCGTCTTCTGACGTCACGGAGGCATTGGGTTCGAAAGGAAAGGAAAGAGAAGGCAGTGCGATGAAGGAAACGGAAAACCAAGGCGTTGACGCATCTCCTTCGAGCACGTTCACCCTGGGAAGGTTAGGAAAAATGACACAGAAAAGGATTGAGGTGCGGCTCAATGTGACGGACACTGAGCTCGAAGGAATCGAGAAAGAAATGCATAAGTTACCTGCGATCGAAAGGAACCCGCGCGAAGCTTTCGCAAACTTCTGA

Coding sequence (CDS)

ATGTCGTCGACCAAGCAGTTGTCGAAAACCCATGTGGAACGTTTAGTAGAGATCGAAGAGCAGTTACTCTACTTGAGGGAAGTCCCTGATGCTATTCGGTTCGTGGAATCTCGGCTGGCTGAGATTTCGACTAAAGCCGACAAAGTTGATGCGGTAGCTGGCCGCGTGGATGGGATGCCCATCCAAGAATTGATGATGAGGGTTGAGAACCTTGAAAGTAAAGCCACCCGACCTGGTAGCTACGAGCGTGGTGATAGCTTGTCGGGCTCTGCTGCCCTGATGGAGGAGCATGTCGATGGCTTAGACAGCTCCCAGAAAGCGATAGTCCAGATGGTTACGGACTTATCAGACGATGTGAAAGCTGCCCTCGACGTGAACAGGGGTGGAGGTTGCGAGATAGACCCTTTGTGCCACCGGCAATCCGAAACCGAGTTGGCTGACTTACTCGTGGGCGAGAGATACCTCACAACTTGGTATCAGAGCACGTTCACCCTGGGAAGGTTAGGAAAAATGACACAGAAAATGATTGAGGTGCAGCTCGATGTGACGGACCCTGATCTCGAAGGAATCGAGAAAGAAATGCATAAGTTACCTGCGATAGAAAGGAACCCGACGAAGCTTTCACATACTTCTGAGGAGACGGTCAAGGCCTTGGCGACGATTGCAAGTGAAATGGTCCATTGGCGAACGAAACCGTCGTCTTCTGACGTCACGGAGGCATTGGGTTCGAAAGGAAAGGAAAGAGAAGGCAGTGCGATGAAGGAAACGGAAAACCAAGGCGTTGACGCATCTCCTTCGAGCACGTTCACCCTGGGAAGGTTAGGAAAAATGACACAGAAAAGGATTGAGGTGCGGCTCAATGTGACGGACACTGAGCTCGAAGGAATCGAGAAAGAAATGCATAAGTTACCTGCGATCGAAAGGAACCCGCGCGAAGCTTTCGCAAACTTCTGA

Protein sequence

MSSTKQLSKTHVERLVEIEEQLLYLREVPDAIRFVESRLAEISTKADKVDAVAGRVDGMPIQELMMRVENLESKATRPGSYERGDSLSGSAALMEEHVDGLDSSQKAIVQMVTDLSDDVKAALDVNRGGGCEIDPLCHRQSETELADLLVGERYLTTWYQSTFTLGRLGKMTQKMIEVQLDVTDPDLEGIEKEMHKLPAIERNPTKLSHTSEETVKALATIASEMVHWRTKPSSSDVTEALGSKGKEREGSAMKETENQGVDASPSSTFTLGRLGKMTQKRIEVRLNVTDTELEGIEKEMHKLPAIERNPREAFANF

Homology

[Close]

BLAST of Spg007062 vs. NCBI nr
Match: XP_022155185.1 (uncharacterized protein LOC111022320 [Momordica charantia])

HSP 1 Score: 154.8 bits (390), Expect = 1.2e-33
Identity = 86/174 (49.43%), Postives = 119/174 (68.39%), Query Frame = 0


Query: 1   MSSTKQLSKTHVERLVEIEEQLLYLREVPDAIRFVESRLAEISTKADKVDAVAGRVDGMP 60
           MS+TKQL K+H++RLVEIEE+LL+LRE+PD +R+VESRL EISTKAD +D V  R+DG+ 
Sbjct: 1   MSTTKQLGKSHIDRLVEIEERLLFLREIPDNLRYVESRLDEISTKADGIDVVNARIDGLA 60

Query: 61  IQELMMRVENLESKATRPGSYERGDSLSGSAALMEEHVDGLDSSQKAIVQMVTDLSDDVK 120
           I+ELM+RVE LE K  R  + ERG+S S S A MEE V+ +D S+K IVQMV++L+DD K
Sbjct: 61  IRELMLRVETLEDKVKRTDNLERGESSSSSIAHMEERVEEIDISKKTIVQMVSELTDDFK 120

Query: 121 AALDVNRGGGCEI--DPLCHRQSETELADLLVGERYLTTWYQSTFTLGRLGKMT 173
           A +D  R    E+   P C  +    L + +     L  ++++T T+    K+T
Sbjct: 121 ATVDEMRAEIAELGTKPFCGARDAKALENFIFD---LEQYFKATSTVTEESKVT 171

[Close]

BLAST of Spg007062 vs. NCBI nr
Match: XP_022150099.1 (uncharacterized protein LOC111018360 [Momordica charantia])

HSP 1 Score: 141.4 bits (355), Expect = 1.4e-29
Identity = 72/133 (54.14%), Postives = 99/133 (74.44%), Query Frame = 0


Query: 1   MSSTKQLSKTHVERLVEIEEQLLYLREVPDAIRFVESRLAEISTKADKVDAVAGRVDGMP 60
           MS+TKQLSK+HV+RLVEIEEQLLYLREVPD +R +E+R+ E S K  ++DAV  R+DG+P
Sbjct: 1   MSTTKQLSKSHVDRLVEIEEQLLYLREVPDFLRLLEARVDEFSEKFGEIDAVNARIDGLP 60

Query: 61  IQELMMRVENLESKATRPGSYERGDSLSGSAALMEEHVDGLDSSQKAIVQMVTDLSDDVK 120
           IQ++ MRVE LESKATRPGS+ERGDS +     +E  +  L++S  A++Q+  ++++D K
Sbjct: 61  IQDIAMRVETLESKATRPGSFERGDSSTNPNTQIEVRMGELNNSHSAMMQLFNEMTEDFK 120

Query: 121 AALDVNRGGGCEI 134
             +D  R    EI
Sbjct: 121 VTIDTLRAEMTEI 133

[Close]

BLAST of Spg007062 vs. NCBI nr
Match: KAA0055407.1 (uncharacterized protein E6C27_scaffold80G002530 [Cucumis melo var. makuwa] >TYK22320.1 uncharacterized protein E5676_scaffold1428G00300 [Cucumis melo var. makuwa])

HSP 1 Score: 140.6 bits (353), Expect = 2.4e-29
Identity = 75/134 (55.97%), Postives = 97/134 (72.39%), Query Frame = 0


Query: 1   MSSTKQLSKTHVERLVEIEEQLLYLREVPDAIRFVESRLAEISTKADKVDAVAGRVDGMP 60
           MSS     K   +RLVE+EEQ+LYL EVPD+IRF+ESRL EI+ K D +D VAGRV+G+ 
Sbjct: 1   MSSANPSGKAQRDRLVELEEQMLYLVEVPDSIRFLESRLEEIAEKNDMIDPVAGRVEGLS 60

Query: 61  IQELMMRVENLESKATRPGSYERGDSLSGSAALMEEHVDGLDSSQKAIVQMVTDLSDDVK 120
           IQEL+ RV+ LE    R GS+ERGDS +GS A +EE V  LD+SQK +++M+ D+S+D +
Sbjct: 61  IQELLARVDTLEGTVGRTGSHERGDSSTGSVAHIEERVQELDNSQKTLLEMINDMSEDFR 120

Query: 121 AALDVNRGGGCEID 135
           A LDV   G C ID
Sbjct: 121 ATLDVE--GRCTID 132

[Close]

BLAST of Spg007062 vs. NCBI nr
Match: XP_022154605.1 (uncharacterized protein LOC111021829 [Momordica charantia])

HSP 1 Score: 139.4 bits (350), Expect = 5.3e-29
Identity = 71/133 (53.38%), Postives = 98/133 (73.68%), Query Frame = 0


Query: 1   MSSTKQLSKTHVERLVEIEEQLLYLREVPDAIRFVESRLAEISTKADKVDAVAGRVDGMP 60
           MS+TKQLSK+HV+RLVEIEEQLLYLREVPD++R +E+R+ E S K  ++DAV  RVDG+P
Sbjct: 1   MSATKQLSKSHVDRLVEIEEQLLYLREVPDSLRLLEARVDEFSEKFGEIDAVNARVDGLP 60

Query: 61  IQELMMRVENLESKATRPGSYERGDSLSGSAALMEEHVDGLDSSQKAIVQMVTDLSDDVK 120
           IQ++ MRVE  ESKATRPGS+ERGDS +     +E  +  L++S   ++Q+  ++++D K
Sbjct: 61  IQDIAMRVETXESKATRPGSFERGDSSTNPNTQIEVRMGELNNSHSTMMQLFNEMTEDFK 120

Query: 121 AALDVNRGGGCEI 134
             +D  R    EI
Sbjct: 121 VTIDTLRAEMTEI 133

[Close]

BLAST of Spg007062 vs. NCBI nr
Match: KAA0066437.1 (uncharacterized protein E6C27_scaffold21G005300 [Cucumis melo var. makuwa])

HSP 1 Score: 137.5 bits (345), Expect = 2.0e-28
Identity = 73/127 (57.48%), Postives = 95/127 (74.80%), Query Frame = 0


Query: 1   MSSTKQLSKTHVERLVEIEEQLLYLREVPDAIRFVESRLAEISTKADKVDAVAGRVDGMP 60
           MSST   SK   +RLVE+EEQ+LYL EVPD+IRF+ESRL EI+ K + +DAVAG V+G+P
Sbjct: 1   MSSTNPSSKAQRDRLVELEEQMLYLVEVPDSIRFLESRLVEIAEKTNMIDAVAGCVEGLP 60

Query: 61  IQELMMRVENLESKATRPGSYERGDSLSGSAALMEEHVDGLDSSQKAIVQMVTDLSDDVK 120
           IQEL+ RV+ LE    R  +YE GDS SG  A MEE V+ LDSSQK +++M+ D+S+D +
Sbjct: 61  IQELLARVDTLEGNVERTINYEYGDSSSGFVAHMEERVNELDSSQKTLLEMINDMSEDFR 120

Query: 121 AALDVNR 128
           A L+V R
Sbjct: 121 ATLNVVR 127

[Close]

BLAST of Spg007062 vs. ExPASy TrEMBL
Match: A0A6J1DLQ6 (uncharacterized protein LOC111022320 OS=Momordica charantia OX=3673 GN=LOC111022320 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 5.9e-34
Identity = 86/174 (49.43%), Postives = 119/174 (68.39%), Query Frame = 0


Query: 1   MSSTKQLSKTHVERLVEIEEQLLYLREVPDAIRFVESRLAEISTKADKVDAVAGRVDGMP 60
           MS+TKQL K+H++RLVEIEE+LL+LRE+PD +R+VESRL EISTKAD +D V  R+DG+ 
Sbjct: 1   MSTTKQLGKSHIDRLVEIEERLLFLREIPDNLRYVESRLDEISTKADGIDVVNARIDGLA 60

Query: 61  IQELMMRVENLESKATRPGSYERGDSLSGSAALMEEHVDGLDSSQKAIVQMVTDLSDDVK 120
           I+ELM+RVE LE K  R  + ERG+S S S A MEE V+ +D S+K IVQMV++L+DD K
Sbjct: 61  IRELMLRVETLEDKVKRTDNLERGESSSSSIAHMEERVEEIDISKKTIVQMVSELTDDFK 120

Query: 121 AALDVNRGGGCEI--DPLCHRQSETELADLLVGERYLTTWYQSTFTLGRLGKMT 173
           A +D  R    E+   P C  +    L + +     L  ++++T T+    K+T
Sbjct: 121 ATVDEMRAEIAELGTKPFCGARDAKALENFIFD---LEQYFKATSTVTEESKVT 171

[Close]

BLAST of Spg007062 vs. ExPASy TrEMBL
Match: A0A6J1D906 (Reverse transcriptase OS=Momordica charantia OX=3673 GN=LOC111018360 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 6.7e-30
Identity = 72/133 (54.14%), Postives = 99/133 (74.44%), Query Frame = 0


Query: 1   MSSTKQLSKTHVERLVEIEEQLLYLREVPDAIRFVESRLAEISTKADKVDAVAGRVDGMP 60
           MS+TKQLSK+HV+RLVEIEEQLLYLREVPD +R +E+R+ E S K  ++DAV  R+DG+P
Sbjct: 1   MSTTKQLSKSHVDRLVEIEEQLLYLREVPDFLRLLEARVDEFSEKFGEIDAVNARIDGLP 60

Query: 61  IQELMMRVENLESKATRPGSYERGDSLSGSAALMEEHVDGLDSSQKAIVQMVTDLSDDVK 120
           IQ++ MRVE LESKATRPGS+ERGDS +     +E  +  L++S  A++Q+  ++++D K
Sbjct: 61  IQDIAMRVETLESKATRPGSFERGDSSTNPNTQIEVRMGELNNSHSAMMQLFNEMTEDFK 120

Query: 121 AALDVNRGGGCEI 134
             +D  R    EI
Sbjct: 121 VTIDTLRAEMTEI 133

[Close]

BLAST of Spg007062 vs. ExPASy TrEMBL
Match: A0A5A7ULF5 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1428G00300 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.1e-29
Identity = 75/134 (55.97%), Postives = 97/134 (72.39%), Query Frame = 0


Query: 1   MSSTKQLSKTHVERLVEIEEQLLYLREVPDAIRFVESRLAEISTKADKVDAVAGRVDGMP 60
           MSS     K   +RLVE+EEQ+LYL EVPD+IRF+ESRL EI+ K D +D VAGRV+G+ 
Sbjct: 1   MSSANPSGKAQRDRLVELEEQMLYLVEVPDSIRFLESRLEEIAEKNDMIDPVAGRVEGLS 60

Query: 61  IQELMMRVENLESKATRPGSYERGDSLSGSAALMEEHVDGLDSSQKAIVQMVTDLSDDVK 120
           IQEL+ RV+ LE    R GS+ERGDS +GS A +EE V  LD+SQK +++M+ D+S+D +
Sbjct: 61  IQELLARVDTLEGTVGRTGSHERGDSSTGSVAHIEERVQELDNSQKTLLEMINDMSEDFR 120

Query: 121 AALDVNRGGGCEID 135
           A LDV   G C ID
Sbjct: 121 ATLDVE--GRCTID 132

[Close]

BLAST of Spg007062 vs. ExPASy TrEMBL
Match: A0A6J1DK29 (uncharacterized protein LOC111021829 OS=Momordica charantia OX=3673 GN=LOC111021829 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 2.5e-29
Identity = 71/133 (53.38%), Postives = 98/133 (73.68%), Query Frame = 0


Query: 1   MSSTKQLSKTHVERLVEIEEQLLYLREVPDAIRFVESRLAEISTKADKVDAVAGRVDGMP 60
           MS+TKQLSK+HV+RLVEIEEQLLYLREVPD++R +E+R+ E S K  ++DAV  RVDG+P
Sbjct: 1   MSATKQLSKSHVDRLVEIEEQLLYLREVPDSLRLLEARVDEFSEKFGEIDAVNARVDGLP 60

Query: 61  IQELMMRVENLESKATRPGSYERGDSLSGSAALMEEHVDGLDSSQKAIVQMVTDLSDDVK 120
           IQ++ MRVE  ESKATRPGS+ERGDS +     +E  +  L++S   ++Q+  ++++D K
Sbjct: 61  IQDIAMRVETXESKATRPGSFERGDSSTNPNTQIEVRMGELNNSHSTMMQLFNEMTEDFK 120

Query: 121 AALDVNRGGGCEI 134
             +D  R    EI
Sbjct: 121 VTIDTLRAEMTEI 133

[Close]

BLAST of Spg007062 vs. ExPASy TrEMBL
Match: A0A5A7VH68 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G005300 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 9.7e-29
Identity = 73/127 (57.48%), Postives = 95/127 (74.80%), Query Frame = 0


Query: 1   MSSTKQLSKTHVERLVEIEEQLLYLREVPDAIRFVESRLAEISTKADKVDAVAGRVDGMP 60
           MSST   SK   +RLVE+EEQ+LYL EVPD+IRF+ESRL EI+ K + +DAVAG V+G+P
Sbjct: 1   MSSTNPSSKAQRDRLVELEEQMLYLVEVPDSIRFLESRLVEIAEKTNMIDAVAGCVEGLP 60

Query: 61  IQELMMRVENLESKATRPGSYERGDSLSGSAALMEEHVDGLDSSQKAIVQMVTDLSDDVK 120
           IQEL+ RV+ LE    R  +YE GDS SG  A MEE V+ LDSSQK +++M+ D+S+D +
Sbjct: 61  IQELLARVDTLEGNVERTINYEYGDSSSGFVAHMEERVNELDSSQKTLLEMINDMSEDFR 120

Query: 121 AALDVNR 128
           A L+V R
Sbjct: 121 ATLNVVR 127

The following BLAST results are available for this feature:

BLAST of Spg007062 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155185.1	1.2e-33	49.43	uncharacterized protein LOC111022320 [Momordica charantia]	[more]
XP_022150099.1	1.4e-29	54.14	uncharacterized protein LOC111018360 [Momordica charantia]	[more]
KAA0055407.1	2.4e-29	55.97	uncharacterized protein E6C27_scaffold80G002530 [Cucumis melo var. makuwa] >TYK2...	[more]
XP_022154605.1	5.3e-29	53.38	uncharacterized protein LOC111021829 [Momordica charantia]	[more]
KAA0066437.1	2.0e-28	57.48	uncharacterized protein E6C27_scaffold21G005300 [Cucumis melo var. makuwa]	[more]

BLAST of Spg007062 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg007062 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DLQ6	5.9e-34	49.43	uncharacterized protein LOC111022320 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1D906	6.7e-30	54.14	Reverse transcriptase OS=Momordica charantia OX=3673 GN=LOC111018360 PE=4 SV=1	[more]
A0A5A7ULF5	1.1e-29	55.97	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A6J1DK29	2.5e-29	53.38	uncharacterized protein LOC111021829 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]
A0A5A7VH68	9.7e-29	57.48	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Spg007062 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 241..255
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 231..269

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg007062.1	Spg007062.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process
molecular_function	GO:0005488	binding
molecular_function	GO:0016787	hydrolase activity