Spg007043 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg007043
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	LINE-1 retrotransposable element ORF2 protein
Location	scaffold9: 48109485 .. 48113134 (+)
RNA-Seq Expression	Spg007043
Synteny	Spg007043

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCCATTGCCACAGGAACCTTCCTTTCTTGCGAAAAGGAGGGTGAAGAAGGAACTCCTCGATAATTTCCTTGTAGTTCCTATATCTAGCAAGGTTGAAACCAAAACTCCTCGAAAAAATAATTCCAAACAGTTTGGGCTAAACCACAACTCCAAAAGATATGATCAACAAGGCAGACCAATCAACATATCTGTTAACTCGGAGGGAGCGTCGGACGACATTTTAGTGCTGTGGAAAGAGAAGGAAGTCAAAGCCTTGGAGGTGGTATCGGGTATTTACTCGCTGTCTGTTTTGTTTGAATGTGGGAATCAAAATCAGTTTTGGGTGACTGGAGTTTATGGGCCTAGCCGTCCTAAGGGTAGAAATTTTTTTTGGAGGGAGCTTTATGACCTCTGTGGGTTGTGCAGTGGAGTTTGGTGCATTGGAGGGGACTTCAATGTGGTGAGAAGTATTGAAGAAAAATCTTTCAGAGGTAGAGTTACTAAAAGTATGCATGCTTTTAACTACTGGGTGGAAAATTGTAGTCTTTCGAAGGTCGTTTTGGTTAATGCTAGATACACATGGTCTGATAAAAGAGAGTCCCTAGTGTTTACTAAAATTGACAAATTCTTTGTGACCAAAGAATGGTTGGACCTCTTCTCCAACGTGAATTCCAATCGGTTACAACGTATTACATCGGATCACTTCCCAATTTTACTTCAAGCTGGGAATTTCTCTTGGGGACCGATGCCTTTTAGATTTGAAAATGCTTGGCTATCCCATCCGAATTTCAGGAACTTGATAGATGGTTGGTGGAAGGAGCAAAATGTGGAAGGGTGGGCAGGGTATCAATTTATGGCCAAACTGAAAGGCATTAAAGAAAACTTAAAAAGGTGGAACAAGGAAACCTTTGGTGCTATAAGAGATGAAAAAACCAGAATTTGCCAGAGAATTGAGCAGCTAGACATCCTTGAGGAAGAGGGGCCCCTAGGTATGCTTTTGTTTGAAGAATGAAAGAATCTCCAGTTAGCTATGGCAAACATCACCATGAAAGAGCAGAGAGTTTGGTTGCAGAAAATGAAAATAAAATGGCTCAAGGAAGGTGATGTGAATTCCAAGTTTTTTCATAGATGGGCGTCTTATAGGAGAAGCAAAAGCTACATCTCTTCCCTCACCAATAATGAAGGGGATCTTATTACTAAAAAGGAAGATATCGAGGAAGAGATTATTAATTTCTATAGGCTTTTATTCAAAAGTGATGGGAATCAGCGTTTTAGTTTGGAGGGAGTTGATTGGGCGCCTATAGATGAGAGTCAAGCTAGATGGCTTGAGGGGCCGTTTGAAAAGGAAGAGAACTTCAAAGCTATTTCGTTATTGGGAAATCAGAAATCCCCTGGGCCGGATGGATTTACGGGAGAATTTTTGAAAAATTCTTGGAACACCATTAAAGATGACTTATTTAAGGTGTTCCAAGAGTTTTTTGAAAATGGTATTGTTAACAAAAGATCCAATGAGACATATCTGTGTTTGATCCCCAAGAAGAAAGTGGCTAGCAAAGTCAATGATTTCCGCCCAATTAGTCTTGTTACTTCAATGTATAAAACCATTTTTAAAGTGTTGGCATAAAGAATAAGAAAGGTTCTGCCTTCAACCATAGATAACTCTCAAATGGCCTTTGTTGAAGGGAGGCAAATCATGGATGCTATTCTTGTGGCTGCTGAGGCGGTGGATGACTACCAGATAAGGAAGAAAAAAGGCTTTGTGTTTAAAGTGGATTTTGAAAAGGCTTATGACAAAGTGGATTGGGAGTTTTTAGACTTCATTCTTCAGGCGAAAGGCTTTGGTAATCGGTGGAGAAAATGGATTAGGGGCTGTTGTTTGAATTCCAACTTTTCTATCTTAATCAATGGTAGGCCTAGAGGGAAGATTGTTGCTTCGAGAGGTATTAGGCATTGCGATCCTTTGTCCCCGTTTCTTTTTACCATAGTTGCTGATTCCTTGAGTCGATTCATTCGAATCTGTAGAGACAAAGGATTTATCGAGGGCTTTAAAATAGGGAAGGATGAAGTTGAGGTTTCTCACATACAATTTGCTAATGACACCCTTTTATTCTGTGATGGCAGCCAGCCAAAAGTGGAAAACTAGAAGGTCTTTCTGGATTTTTTTTAGAAGGCTTCTAGGCTGTCTATTAATATGCAAAAGCCTGGTTTAATTGGCATAAATGTGGAGGAAAAGGAAGTCAAAGCCTTGGCGAAGAAGTTGGGATGTAAAGTTGATAACATTCCTTTTAGCTATCTAGGTGTTAAGGTTGGAGGGAGACCAAAAGTGGCTTCTTTTTGGGACCCGGTTTATGATATAATCAGTAGAAAGTTGGCCACTTGGAGGGGTTTCCCAATCTCAAAAGGTGGTAGATCAACTCTAGTGAAAGCTGTTTTATCAAGCATCCCTGCTTATTATTTGTCTATTTTCAGAATTCCTGTTGGGGTCAGCCAAAAGATTGAAAAATGCTTCAGGAAGTTTTTGTGGAAAGGGGCTGAGCAATCTCACTTGGTGAGATGGGATGTGGTGACCACTCCAAAAAATTTAGGAGGGCTAGGTATTGATAAAATTAGAGGTAAAAATTCGGCCCTCCTTATGAAATGGCTTTGGAGATTTGAAAGAGAACCAGATTCGTTGGGGAGGAGAATTATTAAAAGTAAGTTCGGGGAAGACTTCATTCGGGATAGTTCCAGCTTCAAGAAATGGAAGTCATTTGCTAGCCCTTGGAGGGATATTGCTAGCCTTGCTGTGTTCTACAGTAGCAATAGAAAATTCAAGATTGGCAGGGGGGATAAAGCTATGTTCTGGGACGATGCTTGGCTCTCTGATAGGCCGCTAAAAACGTTTTTTCCTGGGATGTATAGGCTGTCTTCGGCTAGAATGGTTAAAGTTTTAGAGCTGTGGGAGGGGTCCACGTGGGACATTGGGTTGGGAAGGGCGCTTTTCGATAGGGAGATGAATGAATGGGATGAGATGTCTGCTCTTCTTGAACGATGCCAGTTGGGTGACAGTGAGGATGTTGTGTTTTGGAAGCTTGAAGATTCGGGAGTTTACACAGTTAAATCTGCCCTTGAGTCCCTTTCTTCGAGAAGGAGAGTGTTGGAAGAAAGATTTAGCTCGCAAATATGGGAGGGAACTAGCCCCAAAAGGGTGAAATTCTTTATTTGGACCCTTGCCCATCAAAGCATCAATACAATGGATATGGTGCAAAAAGAGGTTCCCTAGTCTGCTCATTTCTCCTAACATGTGTCATGTGCTATAAGAATGAGGAGTCTGCATCTTATTTACTACTTCACTGTGAGTTTGCTGCAAAAGTTTGGAATCGGTTCGTTGATAGCTTTGGGATTGAGGGTTGTAAACTCAATTGTGTGGTTAGTTGGTTGAATGAAGTCTTGGAGGGAGGTGGTTTAAAGGACAAAGCTAAAGTTCTTTGGAGCAATTTCTCAAGGGCTATTGTGTGGCACCTTTGGAAAGAAAGAAATTCATGGGTTTTTACTGAGAAATCGCTTTCGTTTGATATTTTTTGTGATGTTGTACAACAATCGGCCTCTAATTGGAGTGCCCTTGATAGAATTTTTTGTAATTATTCGCCTACCATGATTATGCTTCAATGGAAGTCTTTTGTGTAG

mRNA sequence

ATGTCTCCATTGCCACAGGAACCTTCCTTTCTTGCGAAAAGGAGGGTGAAGAAGGAACTCCTCGATAATTTCCTTGTAGTTCCTATATCTAGCAAGGTTGAAACCAAAACTCCTCGAAAAAATAATTCCAAACAGTTTGGGCTAAACCACAACTCCAAAAGATATGATCAACAAGGCAGACCAATCAACATATCTGTTAACTCGGAGGGAGCGTCGGACGACATTTTAGTGCTGTGGAAAGAGAAGGAAGTCAAAGCCTTGGAGGTGGTATCGGGTATTTACTCGCTGTCTGTTTTGTTTGAATGTGGGAATCAAAATCAGTTTTGGGTGACTGGAGTTTATGGGCCTAGCCGTCCTAAGGGTAGAAATTTTTTTTGGAGGGAGCTTTATGACCTCTGTGGGTTGTGCAGTGGAGTTTGGTGCATTGGAGGGGACTTCAATGTGGTGAGAAGTATTGAAGAAAAATCTTTCAGAGGTAGAGTTACTAAAAGAGGGCTAGGTATTGATAAAATTAGAGGTAAAAATTCGGCCCTCCTTATGAAATGGCTTTGGAGATTTGAAAGAGAACCAGATTCGTTGGGGAGGAGAATTATTAAAAGTAAGTTCGGGGAAGACTTCATTCGGGATAGTTCCAGCTTCAAGAAATGGAAGTCATTTGCTAGCCCTTGGAGGGATATTGCTAGCCTTGCTGTGTTCTACAGTAGCAATAGAAAATTCAAGATTGGCAGGGGGGATAAAGCTATGTTCTGGGACGATGCTTGGCTCTCTGATAGGCCGCTAAAAACGTTTTTTCCTGGGATGTATAGGCTGTCTTCGGCTAGAATGGTTAAAGTTTTAGAGCTGTGGGAGGGGTCCACGTGGGACATTGGGTTGGGAAGGGCGCTTTTCGATAGGGAGATGAATGAATGGGATGAGATGTCTGCTCTTCTTGAACGATGCCAGTTGGGTGACAGTGAGGATGTTGTGTTTTGGAAGCTTGAAGATTCGGGAGTTTACACAGTTAAATCTGCCCTTGAGTCCCTTTCTTCGAGAAGGAGAGTGTTGGAAGAAAGATTTAGCTCGCAAATATGGGAGGGAACTAGCCCCAAAAGGGTGAAATTCTTTATTTGGACCCTTGCCCATCAAAGCATCAATACAATGGATATGGTGCAAAAAGAGTTTGCTGCAAAAGTTTGGAATCGGTTCGTTGATAGCTTTGGGATTGAGGGTTGTAAACTCAATTGTGTGGTTAGTTGGTTGAATGAAGTCTTGGAGGGAGGTGGTTTAAAGGACAAAGCTAAAGTTCTTTGGAGCAATTTCTCAAGGGCTATTGTGTGGCACCTTTGGAAAGAAAGAAATTCATGGGTTTTTACTGAGAAATCGCTTTCGTTTGATATTTTTTGTGATGTTGTACAACAATCGGCCTCTAATTGGAGTGCCCTTGATAGAATTTTTTGTAATTATTCGCCTACCATGATTATGCTTCAATGGAAGTCTTTTGTGTAG

Coding sequence (CDS)

ATGTCTCCATTGCCACAGGAACCTTCCTTTCTTGCGAAAAGGAGGGTGAAGAAGGAACTCCTCGATAATTTCCTTGTAGTTCCTATATCTAGCAAGGTTGAAACCAAAACTCCTCGAAAAAATAATTCCAAACAGTTTGGGCTAAACCACAACTCCAAAAGATATGATCAACAAGGCAGACCAATCAACATATCTGTTAACTCGGAGGGAGCGTCGGACGACATTTTAGTGCTGTGGAAAGAGAAGGAAGTCAAAGCCTTGGAGGTGGTATCGGGTATTTACTCGCTGTCTGTTTTGTTTGAATGTGGGAATCAAAATCAGTTTTGGGTGACTGGAGTTTATGGGCCTAGCCGTCCTAAGGGTAGAAATTTTTTTTGGAGGGAGCTTTATGACCTCTGTGGGTTGTGCAGTGGAGTTTGGTGCATTGGAGGGGACTTCAATGTGGTGAGAAGTATTGAAGAAAAATCTTTCAGAGGTAGAGTTACTAAAAGAGGGCTAGGTATTGATAAAATTAGAGGTAAAAATTCGGCCCTCCTTATGAAATGGCTTTGGAGATTTGAAAGAGAACCAGATTCGTTGGGGAGGAGAATTATTAAAAGTAAGTTCGGGGAAGACTTCATTCGGGATAGTTCCAGCTTCAAGAAATGGAAGTCATTTGCTAGCCCTTGGAGGGATATTGCTAGCCTTGCTGTGTTCTACAGTAGCAATAGAAAATTCAAGATTGGCAGGGGGGATAAAGCTATGTTCTGGGACGATGCTTGGCTCTCTGATAGGCCGCTAAAAACGTTTTTTCCTGGGATGTATAGGCTGTCTTCGGCTAGAATGGTTAAAGTTTTAGAGCTGTGGGAGGGGTCCACGTGGGACATTGGGTTGGGAAGGGCGCTTTTCGATAGGGAGATGAATGAATGGGATGAGATGTCTGCTCTTCTTGAACGATGCCAGTTGGGTGACAGTGAGGATGTTGTGTTTTGGAAGCTTGAAGATTCGGGAGTTTACACAGTTAAATCTGCCCTTGAGTCCCTTTCTTCGAGAAGGAGAGTGTTGGAAGAAAGATTTAGCTCGCAAATATGGGAGGGAACTAGCCCCAAAAGGGTGAAATTCTTTATTTGGACCCTTGCCCATCAAAGCATCAATACAATGGATATGGTGCAAAAAGAGTTTGCTGCAAAAGTTTGGAATCGGTTCGTTGATAGCTTTGGGATTGAGGGTTGTAAACTCAATTGTGTGGTTAGTTGGTTGAATGAAGTCTTGGAGGGAGGTGGTTTAAAGGACAAAGCTAAAGTTCTTTGGAGCAATTTCTCAAGGGCTATTGTGTGGCACCTTTGGAAAGAAAGAAATTCATGGGTTTTTACTGAGAAATCGCTTTCGTTTGATATTTTTTGTGATGTTGTACAACAATCGGCCTCTAATTGGAGTGCCCTTGATAGAATTTTTTGTAATTATTCGCCTACCATGATTATGCTTCAATGGAAGTCTTTTGTGTAG

Protein sequence

MSPLPQEPSFLAKRRVKKELLDNFLVVPISSKVETKTPRKNNSKQFGLNHNSKRYDQQGRPINISVNSEGASDDILVLWKEKEVKALEVVSGIYSLSVLFECGNQNQFWVTGVYGPSRPKGRNFFWRELYDLCGLCSGVWCIGGDFNVVRSIEEKSFRGRVTKRGLGIDKIRGKNSALLMKWLWRFEREPDSLGRRIIKSKFGEDFIRDSSSFKKWKSFASPWRDIASLAVFYSSNRKFKIGRGDKAMFWDDAWLSDRPLKTFFPGMYRLSSARMVKVLELWEGSTWDIGLGRALFDREMNEWDEMSALLERCQLGDSEDVVFWKLEDSGVYTVKSALESLSSRRRVLEERFSSQIWEGTSPKRVKFFIWTLAHQSINTMDMVQKEFAAKVWNRFVDSFGIEGCKLNCVVSWLNEVLEGGGLKDKAKVLWSNFSRAIVWHLWKERNSWVFTEKSLSFDIFCDVVQQSASNWSALDRIFCNYSPTMIMLQWKSFV

Homology

[Close]

BLAST of Spg007043 vs. NCBI nr
Match: CAN65484.1 (hypothetical protein VITISV_029474 [Vitis vinifera])

HSP 1 Score: 167.9 bits (424), Expect = 2.2e-37
Identity = 103/366 (28.14%), Postives = 169/366 (46.17%), Query Frame = 0


Query: 162  TKRGLGIDKIRGKNSALLMKWLWRFEREPDSLGRRIIKSKFGEDFIR-DSSSFKKWKSFA 221
            ++ GLG  KI  +N ALL KWLWR+ RE  +L  ++I S +G      D ++  +W S  
Sbjct: 1516 SRGGLGFGKISIRNVALLGKWLWRYPREGSALWHQVILSIYGSHSNGWDVNNIVRW-SHR 1575

Query: 222  SPWRDIASLAVFYSSNRKFKIGRGDKAMFWDDAWLSDRPLKTFFPGMYRL---SSARMVK 281
             PW+ IA +   +S   +F +G GD+  FWDD W  ++PL   +P + R+    +A +  
Sbjct: 1576 CPWKAIALVYQEFSKFTRFVVGNGDRIRFWDDLWWGEQPLGVQYPRLLRVVTDKNAPISS 1635

Query: 282  VLELWEGSTWDIGLGRALFDREMNEWDEMSALLERCQLGDS-EDVVFWKLEDSGVYTVKS 341
            +L      +W+    R L D E+ + + +   L+R  +  S  D   W L  SG++TVKS
Sbjct: 1636 ILGYTRPFSWNFTFRRNLSDSEIEDLEGLMQSLDRLHISSSVPDKRSWFLSPSGLFTVKS 1695

Query: 342  ---ALESLSSRRRVLEERFSSQIWEGTSPKRVKFFIWTLAHQSINTMDMVQKEFAAK--- 401
               AL   S    +   +F   +W    P +VK F+W +AH+ +NT D++Q     K   
Sbjct: 1696 FFLALSQYSESPTIFPTKF---VWNAQVPFKVKSFVWLVAHKKVNTNDLLQLRRPYKALS 1755

Query: 402  --------------------------VWNRFVDSFGIEGCKLNCVVSWLNEVLEGGGLKD 461
                                      +W+R   S  ++      +   L+    G G   
Sbjct: 1756 PDICKLCMKHGETVDHLFLHCSLTIGLWHRLFQSAKMDWVSPRSISDMLSSNFNGFGFSK 1815

Query: 462  KAKVLWSNFSRAIVWHLWKERNSWVFTEKSLSFDIFCDVVQQSASNWSALDRIFCNYSPT 491
            +  VLW N   AI+W +W+ERN+ +F +K+ + +   D +    S W+   ++F      
Sbjct: 1816 RGIVLWQNACIAIMWVVWRERNARIFEDKARNSEYLWDSICFLTSFWAFCSKVFKGIPLN 1875

[Close]

BLAST of Spg007043 vs. NCBI nr
Match: CAN65484.1 (hypothetical protein VITISV_029474 [Vitis vinifera])

HSP 1 Score: 89.7 bits (221), Expect = 7.4e-14
Identity = 41/93 (44.09%), Postives = 54/93 (58.06%), Query Frame = 0


Query: 70  GASDDILVLWKEKEVKALEVVSGIYSLSVLFECGNQNQFWVTGVYGPSRPKGRNFFWREL 129
           GAS  IL++W  K++   EVV G +S+S+ F        W++ VYGP+    R  FW EL
Sbjct: 728 GASGGILIIWDAKKLSREEVVLGSFSVSIKFALNGCESLWLSAVYGPNISALRKDFWVEL 787

Query: 130 YDLCGLCSGVWCIGGDFNVVRSIEEKSFRGRVT 163
            D+ GL S  WC+GGDFNV+R   EK    R T
Sbjct: 788 SDIAGLASPRWCVGGDFNVIRRSSEKLGGSRXT 820

HSP 2 Score: 166.0 bits (419), Expect = 8.2e-37
Identity = 105/354 (29.66%), Postives = 166/354 (46.89%), Query Frame = 0


Query: 163  KRGLGIDKIRGKNSALLMKWLWRFEREPDSLGRRIIKSKFGEDFIR-DSSSFKKWKSFAS 222
            K GLG+  I  +NSALL KWLWR+ RE  +L  ++I S +G      D+++  +W S   
Sbjct: 659  KGGLGLGMISLRNSALLGKWLWRYPREGSALWHQVILSIYGSHSNGWDANTVVRW-SHRC 718

Query: 223  PWRDIASLAVFYSSNRKFKIGRGDKAMFWDDAWLSDRPLKTFFPGMYRLSSARMVKVLEL 282
            PW+ IA +   +S   +F +G GD+  FW+D W  D+ L   FP + R+   + + +  +
Sbjct: 719  PWKAIAQVFQDFSKFTRFMVGDGDRIRFWEDLWWGDQSLGVRFPRLLRVVMDKNIPISSI 778

Query: 283  WEGST----WDIGLGRALFDREMNEWDEMSALLERCQLGDS-EDVVFWKLEDSGVYTVKS 342
              GST    W+    R L D E+ E + +   L+   L  S  D   W L  SG++TVKS
Sbjct: 779  L-GSTRPFSWNFNFRRNLSDSEIEELESLMQSLDHLHLSPSIPDKRSWSLSSSGLFTVKS 838

Query: 343  ---ALESLSSRRRVLEERFSSQIWEGTSPKRVKFFIWTLAHQSINTMDMVQKEFAAK--- 402
               AL  +S    V   +    +W    P ++KFF+W +AH+ +NT DM+Q     K   
Sbjct: 839  FFLALSQISGLPLVFPTKL---VWNSQVPFKIKFFVWLVAHKKVNTSDMLQLRRPYKALS 898

Query: 403  --------------------------VWNRFVDSFGIEGCKLNCVVSWLNEVLEGGGLKD 462
                                      +W+R      I+      V   ++    G G   
Sbjct: 899  PDICMLCMERGETVDHLFLHCSMTMGLWHRLFQLTKIDWVPPRSVFDMISINFNGFGSSK 958

Query: 463  KAKVLWSNFSRAIVWHLWKERNSWVFTEKSLSFDIFCDVVQQSASNWSALDRIF 479
            +  VLW     AI+W +W+ERN+ +F +KS + +   D++   AS W +  ++F
Sbjct: 959  RGIVLWQAACIAILWVVWRERNARIFEDKSRNSENLWDMIHFLASLWVSCSKVF 1007

[Close]

BLAST of Spg007043 vs. NCBI nr
Match: RVW27524.1 (putative ribonuclease H protein [Vitis vinifera])

HSP 1 Score: 102.4 bits (254), Expect = 1.1e-17
Identity = 48/109 (44.04%), Postives = 64/109 (58.72%), Query Frame = 0


Query: 70  GASDDILVLWKEKEVKALEVVSGIYSLSVLFECGNQNQFWVTGVYGPSRPKGRNFFWREL 129
           GAS  ILV+W  K++ + EVV G +S+SV F      QFW++ VYGP+    R  FW EL
Sbjct: 33  GASGGILVMWDSKKLHSEEVVLGSFSVSVKFAVDGSEQFWLSAVYGPNSTALRKDFWEEL 92

Query: 130 YDLCGLCSGVWCIGGDFNVVRSIEEKSFRGRVTKRGLGIDKIRGKNSAL 179
            D+ GL S  WC+GGDFNV+R   EK   GR+T     +D    +N  +
Sbjct: 93  SDIFGLSSPCWCVGGDFNVIRRCSEKLGGGRLTPSMKDLDDFIRENELI 141

HSP 2 Score: 165.2 bits (417), Expect = 1.4e-36
Identity = 101/366 (27.60%), Postives = 167/366 (45.63%), Query Frame = 0


Query: 162 TKRGLGIDKIRGKNSALLMKWLWRFEREPDSLGRRIIKSKFGEDFIR-DSSSFKKWKSFA 221
           ++ GLG  KI  +N ALL KWLWR+ RE  +L  ++I S +G      D ++  +W S  
Sbjct: 254 SRGGLGFGKISIRNVALLGKWLWRYPREGSALWHQVILSIYGSHSNGWDVNNIVRW-SHR 313

Query: 222 SPWRDIASLAVFYSSNRKFKIGRGDKAMFWDDAWLSDRPLKTFFPGMYRL---SSARMVK 281
            PW+ IA +   +S   +F +G GD+  FWDD W  ++PL   +P + R+    +A +  
Sbjct: 314 CPWKAIALVYQEFSKFTRFVVGNGDRIRFWDDLWWGEQPLGVQYPRLLRVVTDKNAPISS 373

Query: 282 VLELWEGSTWDIGLGRALFDREMNEWDEMSALLERCQLGDS-EDVVFWKLEDSGVYTVKS 341
           +L      +W+    R L D E+ + + +    +R  +  S  D   W L  SG++TVKS
Sbjct: 374 ILGYTRPFSWNFTFRRNLSDSEIEDLEGLMQSFDRLHISSSVPDKRSWSLSPSGLFTVKS 433

Query: 342 ---ALESLSSRRRVLEERFSSQIWEGTSPKRVKFFIWTLAHQSINTMDMVQKEFAAK--- 401
              AL   S    +   +F   +W    P +VK F+W +AH+ +NT D++Q     K   
Sbjct: 434 FFLALSQYSESPPIFPTKF---VWNAQVPFKVKSFVWLVAHKKVNTNDLLQLRRPYKALS 493

Query: 402 --------------------------VWNRFVDSFGIEGCKLNCVVSWLNEVLEGGGLKD 461
                                     +W+R   S  ++      +   L     G G   
Sbjct: 494 PDICKLCMKHGETVDHLFLHCSLTIGLWHRLFQSAKMDWVSPRSISDMLASNFNGFGFSK 553

Query: 462 KAKVLWSNFSRAIVWHLWKERNSWVFTEKSLSFDIFCDVVQQSASNWSALDRIFCNYSPT 491
           +  VLW N   A++W +W+ERN+ +F +K+ + +   D +    S W+   ++F      
Sbjct: 554 RGIVLWQNACIALMWVVWRERNARIFEDKARNSEYLWDSICFLTSFWAFCSKVFKGIPLN 613

[Close]

BLAST of Spg007043 vs. NCBI nr
Match: RVW74148.1 (putative ribonuclease H protein [Vitis vinifera])

HSP 1 Score: 164.5 bits (415), Expect = 2.4e-36
Identity = 103/351 (29.34%), Postives = 163/351 (46.44%), Query Frame = 0


Query: 163 KRGLGIDKIRGKNSALLMKWLWRFEREPDSLGRRIIKSKFGEDFIR-DSSSFKKWKSFAS 222
           K GLG+  I  +NSALL KWLWR+ RE  +L  ++I S +G      D+++  +W S   
Sbjct: 51  KGGLGLGMISLRNSALLGKWLWRYPREGSALWHQVILSIYGSHSNGWDANTVVRW-SHRC 110

Query: 223 PWRDIASLAVFYSSNRKFKIGRGDKAMFWDDAWLSDRPLKTFFPGMYRLSSARMVKVLEL 282
           PW  IA +   +S   +F +G GD+  FW+D W  D+ L   FP + R    + + +  +
Sbjct: 111 PWNAIAQVFQDFSKFTRFMVGDGDRIRFWEDLWWGDQSLGVRFPRLLRAVMDKNIPISSI 170

Query: 283 WEGST----WDIGLGRALFDREMNEWDEMSALLERCQLGDS-EDVVFWKLEDSGVYTVKS 342
             GST    W+    R L D E+ E + +   L+   L  S  D   W L  SG++TVKS
Sbjct: 171 L-GSTRPFSWNFNFRRNLSDYEIEELESLMQSLDHLHLSPSIPDKRSWSLSSSGLFTVKS 230

Query: 343 ALESLSSRRRVLEERFSSQIWEGTSPKRVKFFIWTLAHQSINTMDMVQKEFAAK------ 402
              +LS    +     +  +W    P ++KFF+W +AH+ +NT DM+Q     K      
Sbjct: 231 FFLALSQISGLPSVFPTKLVWNSQVPFKIKFFVWLVAHKKVNTNDMLQLRRPYKALSPDI 290

Query: 403 -----------------------VWNRFVDSFGIEGCKLNCVVSWLNEVLEGGGLKDKAK 462
                                  +W+R      I+      V   ++    G G   +  
Sbjct: 291 CMLCMERGETVDHLFLHCSMTMGLWHRLFQLTKIDWVPPRSVFDMISINFNGFGSSKRGI 350

Query: 463 VLWSNFSRAIVWHLWKERNSWVFTEKSLSFDIFCDVVQQSASNWSALDRIF 479
           VLW     AI+W +W+ERN+ +F +KS + +   D++   AS W +  ++F
Sbjct: 351 VLWQAACIAILWVVWRERNARIFEDKSRNSENLWDMIHFLASLWVSCSKVF 399

[Close]

BLAST of Spg007043 vs. NCBI nr
Match: RVW70235.1 (LINE-1 retrotransposable element ORF2 protein [Vitis vinifera])

HSP 1 Score: 164.5 bits (415), Expect = 2.4e-36
Identity = 101/366 (27.60%), Postives = 167/366 (45.63%), Query Frame = 0


Query: 162  TKRGLGIDKIRGKNSALLMKWLWRFEREPDSLGRRIIKSKFGEDFIR-DSSSFKKWKSFA 221
            ++ GLG  KI  +N ALL KWLWR+ RE  +L  ++I S +G      D ++  +W S  
Sbjct: 1664 SRGGLGFGKISIRNVALLGKWLWRYPREGSALWHQVILSIYGSHSNGWDVNNIVRW-SHR 1723

Query: 222  SPWRDIASLAVFYSSNRKFKIGRGDKAMFWDDAWLSDRPLKTFFPGMYRL---SSARMVK 281
             PW+ IA +   +S   +F +G GD+  FWDD W  ++PL   +P + R+    +A +  
Sbjct: 1724 CPWKAIALVYQEFSKFTRFVVGNGDRIRFWDDLWWGEQPLGVQYPRLLRVVTDKNAPISS 1783

Query: 282  VLELWEGSTWDIGLGRALFDREMNEWDEMSALLERCQLGDS-EDVVFWKLEDSGVYTVKS 341
            +L      +W+    R L D E+ + + +    +R  +  S  D   W L  SG++TVKS
Sbjct: 1784 ILGSTRPFSWNFTFRRNLSDSEIEDLEGLMQSFDRLHISSSVPDKRSWSLSSSGLFTVKS 1843

Query: 342  ---ALESLSSRRRVLEERFSSQIWEGTSPKRVKFFIWTLAHQSINTMDMVQKEFAAK--- 401
               AL   S    +   +F   +W    P +VK F+W +AH+ +NT D++Q     K   
Sbjct: 1844 FFLALSQYSVSPPIFPTKF---VWNAQVPFKVKSFVWLVAHKKVNTNDLLQLRRPYKALS 1903

Query: 402  --------------------------VWNRFVDSFGIEGCKLNCVVSWLNEVLEGGGLKD 461
                                      +W+R   S  ++      +   L     G G   
Sbjct: 1904 PDICKLCMKHGETVDHLFLHCSLTIGLWHRLFQSAKMDWVSPRSISDMLASNFNGFGFSK 1963

Query: 462  KAKVLWSNFSRAIVWHLWKERNSWVFTEKSLSFDIFCDVVQQSASNWSALDRIFCNYSPT 491
            +  VLW N   A++W +W+ERN+ +F +K+ + +   D +    S W+   ++F      
Sbjct: 1964 RGIVLWQNACIALMWVVWRERNARIFEDKARNSEYLWDSICFLTSFWAFCSKVFKGIPLN 2023

[Close]

BLAST of Spg007043 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 3.0e-18
Identity = 89/323 (27.55%), Postives = 137/323 (42.41%), Query Frame = 0


Query: 165 GLGIDKIRGKNSALLMKWLWRFEREPDSLGRRIIKSKFGEDFIRDSSSFKKWKSFASPWR 224
           GLG+   +  N AL+ K  WR  +E +SL   +++ K+    IRDS       S++S WR
Sbjct: 100 GLGVRAAKSMNRALISKVGWRLLQEKNSLWTLVLQKKYHVGEIRDSRWLIPKGSWSSTWR 159

Query: 225 DIA-SLAVFYSSNRKFKIGRGDKAMFWDDAWLSDRPLKTFFPGMYRLSSARMVKVLELW- 284
            IA  L    S    +  G G +  FW D W+S +PL     G  R +    V   +LW 
Sbjct: 160 SIAIGLRDVVSHGVGWIPGDGQQIRFWTDRWVSGKPLLELDNG-ERPTDCDTVVAKDLWI 219

Query: 285 EGSTWDIGLGRALFD--REMNEWDEMSALLERCQLGDSEDVVFWKLEDSGVYTVKSALES 344
            G  WD     A  D     N   E+ A++     G + D + WK    G ++V+SA E 
Sbjct: 220 PGRGWDF----AKIDPYTTNNTRLELRAVVLDLVTG-ARDRLSWKFSQDGQFSVRSAYEM 279

Query: 345 LSSRR--RVLEERFSSQIWEGTSPKRVKFFIWTLAHQSINT------------------- 404
           L+     R     F + +W+   P+RVK F+W + +Q++ T                   
Sbjct: 280 LTVDEVPRPNMASFFNCLWKVRVPERVKTFLWLVGNQAVMTEEERHRRHLSASNVCQVCK 339

Query: 405 -----MDMVQKEFAAK--VWNRFVDSFGIEGCKLNCVVSWLNEVL-EGGGLKDKAKVLWS 455
                M  V ++  A+  +W R V     +G     +  WL + L +  G +D   + WS
Sbjct: 340 GGVESMLHVLRDCPAQLGIWVRVVPQRRQQGFFSKSLFEWLYDNLGDRSGCED---IPWS 399

[Close]

BLAST of Spg007043 vs. ExPASy TrEMBL
Match: A5BCI7 (Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_029474 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.0e-37
Identity = 103/366 (28.14%), Postives = 169/366 (46.17%), Query Frame = 0


Query: 162  TKRGLGIDKIRGKNSALLMKWLWRFEREPDSLGRRIIKSKFGEDFIR-DSSSFKKWKSFA 221
            ++ GLG  KI  +N ALL KWLWR+ RE  +L  ++I S +G      D ++  +W S  
Sbjct: 1516 SRGGLGFGKISIRNVALLGKWLWRYPREGSALWHQVILSIYGSHSNGWDVNNIVRW-SHR 1575

Query: 222  SPWRDIASLAVFYSSNRKFKIGRGDKAMFWDDAWLSDRPLKTFFPGMYRL---SSARMVK 281
             PW+ IA +   +S   +F +G GD+  FWDD W  ++PL   +P + R+    +A +  
Sbjct: 1576 CPWKAIALVYQEFSKFTRFVVGNGDRIRFWDDLWWGEQPLGVQYPRLLRVVTDKNAPISS 1635

Query: 282  VLELWEGSTWDIGLGRALFDREMNEWDEMSALLERCQLGDS-EDVVFWKLEDSGVYTVKS 341
            +L      +W+    R L D E+ + + +   L+R  +  S  D   W L  SG++TVKS
Sbjct: 1636 ILGYTRPFSWNFTFRRNLSDSEIEDLEGLMQSLDRLHISSSVPDKRSWFLSPSGLFTVKS 1695

Query: 342  ---ALESLSSRRRVLEERFSSQIWEGTSPKRVKFFIWTLAHQSINTMDMVQKEFAAK--- 401
               AL   S    +   +F   +W    P +VK F+W +AH+ +NT D++Q     K   
Sbjct: 1696 FFLALSQYSESPTIFPTKF---VWNAQVPFKVKSFVWLVAHKKVNTNDLLQLRRPYKALS 1755

Query: 402  --------------------------VWNRFVDSFGIEGCKLNCVVSWLNEVLEGGGLKD 461
                                      +W+R   S  ++      +   L+    G G   
Sbjct: 1756 PDICKLCMKHGETVDHLFLHCSLTIGLWHRLFQSAKMDWVSPRSISDMLSSNFNGFGFSK 1815

Query: 462  KAKVLWSNFSRAIVWHLWKERNSWVFTEKSLSFDIFCDVVQQSASNWSALDRIFCNYSPT 491
            +  VLW N   AI+W +W+ERN+ +F +K+ + +   D +    S W+   ++F      
Sbjct: 1816 RGIVLWQNACIAIMWVVWRERNARIFEDKARNSEYLWDSICFLTSFWAFCSKVFKGIPLN 1875

[Close]

BLAST of Spg007043 vs. ExPASy TrEMBL
Match: A5BCI7 (Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_029474 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.6e-14
Identity = 41/93 (44.09%), Postives = 54/93 (58.06%), Query Frame = 0


Query: 70  GASDDILVLWKEKEVKALEVVSGIYSLSVLFECGNQNQFWVTGVYGPSRPKGRNFFWREL 129
           GAS  IL++W  K++   EVV G +S+S+ F        W++ VYGP+    R  FW EL
Sbjct: 728 GASGGILIIWDAKKLSREEVVLGSFSVSIKFALNGCESLWLSAVYGPNISALRKDFWVEL 787

Query: 130 YDLCGLCSGVWCIGGDFNVVRSIEEKSFRGRVT 163
            D+ GL S  WC+GGDFNV+R   EK    R T
Sbjct: 788 SDIAGLASPRWCVGGDFNVIRRSSEKLGGSRXT 820

HSP 2 Score: 166.0 bits (419), Expect = 4.0e-37
Identity = 105/354 (29.66%), Postives = 166/354 (46.89%), Query Frame = 0


Query: 163  KRGLGIDKIRGKNSALLMKWLWRFEREPDSLGRRIIKSKFGEDFIR-DSSSFKKWKSFAS 222
            K GLG+  I  +NSALL KWLWR+ RE  +L  ++I S +G      D+++  +W S   
Sbjct: 659  KGGLGLGMISLRNSALLGKWLWRYPREGSALWHQVILSIYGSHSNGWDANTVVRW-SHRC 718

Query: 223  PWRDIASLAVFYSSNRKFKIGRGDKAMFWDDAWLSDRPLKTFFPGMYRLSSARMVKVLEL 282
            PW+ IA +   +S   +F +G GD+  FW+D W  D+ L   FP + R+   + + +  +
Sbjct: 719  PWKAIAQVFQDFSKFTRFMVGDGDRIRFWEDLWWGDQSLGVRFPRLLRVVMDKNIPISSI 778

Query: 283  WEGST----WDIGLGRALFDREMNEWDEMSALLERCQLGDS-EDVVFWKLEDSGVYTVKS 342
              GST    W+    R L D E+ E + +   L+   L  S  D   W L  SG++TVKS
Sbjct: 779  L-GSTRPFSWNFNFRRNLSDSEIEELESLMQSLDHLHLSPSIPDKRSWSLSSSGLFTVKS 838

Query: 343  ---ALESLSSRRRVLEERFSSQIWEGTSPKRVKFFIWTLAHQSINTMDMVQKEFAAK--- 402
               AL  +S    V   +    +W    P ++KFF+W +AH+ +NT DM+Q     K   
Sbjct: 839  FFLALSQISGLPLVFPTKL---VWNSQVPFKIKFFVWLVAHKKVNTSDMLQLRRPYKALS 898

Query: 403  --------------------------VWNRFVDSFGIEGCKLNCVVSWLNEVLEGGGLKD 462
                                      +W+R      I+      V   ++    G G   
Sbjct: 899  PDICMLCMERGETVDHLFLHCSMTMGLWHRLFQLTKIDWVPPRSVFDMISINFNGFGSSK 958

Query: 463  KAKVLWSNFSRAIVWHLWKERNSWVFTEKSLSFDIFCDVVQQSASNWSALDRIF 479
            +  VLW     AI+W +W+ERN+ +F +KS + +   D++   AS W +  ++F
Sbjct: 959  RGIVLWQAACIAILWVVWRERNARIFEDKSRNSENLWDMIHFLASLWVSCSKVF 1007

[Close]

BLAST of Spg007043 vs. ExPASy TrEMBL
Match: A0A438CWE0 (Putative ribonuclease H protein OS=Vitis vinifera OX=29760 GN=VvCHDh000004_278 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 5.4e-18
Identity = 48/109 (44.04%), Postives = 64/109 (58.72%), Query Frame = 0


Query: 70  GASDDILVLWKEKEVKALEVVSGIYSLSVLFECGNQNQFWVTGVYGPSRPKGRNFFWREL 129
           GAS  ILV+W  K++ + EVV G +S+SV F      QFW++ VYGP+    R  FW EL
Sbjct: 33  GASGGILVMWDSKKLHSEEVVLGSFSVSVKFAVDGSEQFWLSAVYGPNSTALRKDFWEEL 92

Query: 130 YDLCGLCSGVWCIGGDFNVVRSIEEKSFRGRVTKRGLGIDKIRGKNSAL 179
            D+ GL S  WC+GGDFNV+R   EK   GR+T     +D    +N  +
Sbjct: 93  SDIFGLSSPCWCVGGDFNVIRRCSEKLGGGRLTPSMKDLDDFIRENELI 141

HSP 2 Score: 165.2 bits (417), Expect = 6.7e-37
Identity = 101/366 (27.60%), Postives = 167/366 (45.63%), Query Frame = 0


Query: 162 TKRGLGIDKIRGKNSALLMKWLWRFEREPDSLGRRIIKSKFGEDFIR-DSSSFKKWKSFA 221
           ++ GLG  KI  +N ALL KWLWR+ RE  +L  ++I S +G      D ++  +W S  
Sbjct: 254 SRGGLGFGKISIRNVALLGKWLWRYPREGSALWHQVILSIYGSHSNGWDVNNIVRW-SHR 313

Query: 222 SPWRDIASLAVFYSSNRKFKIGRGDKAMFWDDAWLSDRPLKTFFPGMYRL---SSARMVK 281
            PW+ IA +   +S   +F +G GD+  FWDD W  ++PL   +P + R+    +A +  
Sbjct: 314 CPWKAIALVYQEFSKFTRFVVGNGDRIRFWDDLWWGEQPLGVQYPRLLRVVTDKNAPISS 373

Query: 282 VLELWEGSTWDIGLGRALFDREMNEWDEMSALLERCQLGDS-EDVVFWKLEDSGVYTVKS 341
           +L      +W+    R L D E+ + + +    +R  +  S  D   W L  SG++TVKS
Sbjct: 374 ILGYTRPFSWNFTFRRNLSDSEIEDLEGLMQSFDRLHISSSVPDKRSWSLSPSGLFTVKS 433

Query: 342 ---ALESLSSRRRVLEERFSSQIWEGTSPKRVKFFIWTLAHQSINTMDMVQKEFAAK--- 401
              AL   S    +   +F   +W    P +VK F+W +AH+ +NT D++Q     K   
Sbjct: 434 FFLALSQYSESPPIFPTKF---VWNAQVPFKVKSFVWLVAHKKVNTNDLLQLRRPYKALS 493

Query: 402 --------------------------VWNRFVDSFGIEGCKLNCVVSWLNEVLEGGGLKD 461
                                     +W+R   S  ++      +   L     G G   
Sbjct: 494 PDICKLCMKHGETVDHLFLHCSLTIGLWHRLFQSAKMDWVSPRSISDMLASNFNGFGFSK 553

Query: 462 KAKVLWSNFSRAIVWHLWKERNSWVFTEKSLSFDIFCDVVQQSASNWSALDRIFCNYSPT 491
           +  VLW N   A++W +W+ERN+ +F +K+ + +   D +    S W+   ++F      
Sbjct: 554 RGIVLWQNACIALMWVVWRERNARIFEDKARNSEYLWDSICFLTSFWAFCSKVFKGIPLN 613

[Close]

BLAST of Spg007043 vs. ExPASy TrEMBL
Match: A0A438GDE7 (LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=Pol_4 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.2e-36
Identity = 101/366 (27.60%), Postives = 167/366 (45.63%), Query Frame = 0


Query: 162  TKRGLGIDKIRGKNSALLMKWLWRFEREPDSLGRRIIKSKFGEDFIR-DSSSFKKWKSFA 221
            ++ GLG  KI  +N ALL KWLWR+ RE  +L  ++I S +G      D ++  +W S  
Sbjct: 1664 SRGGLGFGKISIRNVALLGKWLWRYPREGSALWHQVILSIYGSHSNGWDVNNIVRW-SHR 1723

Query: 222  SPWRDIASLAVFYSSNRKFKIGRGDKAMFWDDAWLSDRPLKTFFPGMYRL---SSARMVK 281
             PW+ IA +   +S   +F +G GD+  FWDD W  ++PL   +P + R+    +A +  
Sbjct: 1724 CPWKAIALVYQEFSKFTRFVVGNGDRIRFWDDLWWGEQPLGVQYPRLLRVVTDKNAPISS 1783

Query: 282  VLELWEGSTWDIGLGRALFDREMNEWDEMSALLERCQLGDS-EDVVFWKLEDSGVYTVKS 341
            +L      +W+    R L D E+ + + +    +R  +  S  D   W L  SG++TVKS
Sbjct: 1784 ILGSTRPFSWNFTFRRNLSDSEIEDLEGLMQSFDRLHISSSVPDKRSWSLSSSGLFTVKS 1843

Query: 342  ---ALESLSSRRRVLEERFSSQIWEGTSPKRVKFFIWTLAHQSINTMDMVQKEFAAK--- 401
               AL   S    +   +F   +W    P +VK F+W +AH+ +NT D++Q     K   
Sbjct: 1844 FFLALSQYSVSPPIFPTKF---VWNAQVPFKVKSFVWLVAHKKVNTNDLLQLRRPYKALS 1903

Query: 402  --------------------------VWNRFVDSFGIEGCKLNCVVSWLNEVLEGGGLKD 461
                                      +W+R   S  ++      +   L     G G   
Sbjct: 1904 PDICKLCMKHGETVDHLFLHCSLTIGLWHRLFQSAKMDWVSPRSISDMLASNFNGFGFSK 1963

Query: 462  KAKVLWSNFSRAIVWHLWKERNSWVFTEKSLSFDIFCDVVQQSASNWSALDRIFCNYSPT 491
            +  VLW N   A++W +W+ERN+ +F +K+ + +   D +    S W+   ++F      
Sbjct: 1964 RGIVLWQNACIALMWVVWRERNARIFEDKARNSEYLWDSICFLTSFWAFCSKVFKGIPLN 2023

[Close]

BLAST of Spg007043 vs. ExPASy TrEMBL
Match: A0A438GDE7 (LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=Pol_4 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.0e-13
Identity = 39/93 (41.94%), Postives = 54/93 (58.06%), Query Frame = 0


Query: 70  GASDDILVLWKEKEVKALEVVSGIYSLSVLFECGNQNQFWVTGVYGPSRPKGRNFFWREL 129
           GAS  IL++W  K++   EV+ G +S+S+ F        W++ VYGP+    R   W EL
Sbjct: 876 GASGGILIIWDTKKLSREEVMLGSFSVSIKFTLNGCESLWLSAVYGPNNSALRKDLWVEL 935

Query: 130 YDLCGLCSGVWCIGGDFNVVRSIEEKSFRGRVT 163
            D+ GL S  WC+GGDFNV+R   EK    R+T
Sbjct: 936 SDIAGLASPRWCVGGDFNVIRRSSEKLGGSRLT 968

HSP 2 Score: 164.5 bits (415), Expect = 1.2e-36
Identity = 103/351 (29.34%), Postives = 163/351 (46.44%), Query Frame = 0


Query: 163 KRGLGIDKIRGKNSALLMKWLWRFEREPDSLGRRIIKSKFGEDFIR-DSSSFKKWKSFAS 222
           K GLG+  I  +NSALL KWLWR+ RE  +L  ++I S +G      D+++  +W S   
Sbjct: 51  KGGLGLGMISLRNSALLGKWLWRYPREGSALWHQVILSIYGSHSNGWDANTVVRW-SHRC 110

Query: 223 PWRDIASLAVFYSSNRKFKIGRGDKAMFWDDAWLSDRPLKTFFPGMYRLSSARMVKVLEL 282
           PW  IA +   +S   +F +G GD+  FW+D W  D+ L   FP + R    + + +  +
Sbjct: 111 PWNAIAQVFQDFSKFTRFMVGDGDRIRFWEDLWWGDQSLGVRFPRLLRAVMDKNIPISSI 170

Query: 283 WEGST----WDIGLGRALFDREMNEWDEMSALLERCQLGDS-EDVVFWKLEDSGVYTVKS 342
             GST    W+    R L D E+ E + +   L+   L  S  D   W L  SG++TVKS
Sbjct: 171 L-GSTRPFSWNFNFRRNLSDYEIEELESLMQSLDHLHLSPSIPDKRSWSLSSSGLFTVKS 230

Query: 343 ALESLSSRRRVLEERFSSQIWEGTSPKRVKFFIWTLAHQSINTMDMVQKEFAAK------ 402
              +LS    +     +  +W    P ++KFF+W +AH+ +NT DM+Q     K      
Sbjct: 231 FFLALSQISGLPSVFPTKLVWNSQVPFKIKFFVWLVAHKKVNTNDMLQLRRPYKALSPDI 290

Query: 403 -----------------------VWNRFVDSFGIEGCKLNCVVSWLNEVLEGGGLKDKAK 462
                                  +W+R      I+      V   ++    G G   +  
Sbjct: 291 CMLCMERGETVDHLFLHCSMTMGLWHRLFQLTKIDWVPPRSVFDMISINFNGFGSSKRGI 350

Query: 463 VLWSNFSRAIVWHLWKERNSWVFTEKSLSFDIFCDVVQQSASNWSALDRIF 479
           VLW     AI+W +W+ERN+ +F +KS + +   D++   AS W +  ++F
Sbjct: 351 VLWQAACIAILWVVWRERNARIFEDKSRNSENLWDMIHFLASLWVSCSKVF 399

The following BLAST results are available for this feature:

BLAST of Spg007043 vs. NCBI nr


Match Name	E-value	Identity	Description
CAN65484.1	2.2e-37	28.14	hypothetical protein VITISV_029474 [Vitis vinifera]	[more]
CAN65484.1	7.4e-14	44.09	hypothetical protein VITISV_029474 [Vitis vinifera]	[more]
RVW27524.1	1.1e-17	44.04	putative ribonuclease H protein [Vitis vinifera]	[more]
RVW74148.1	2.4e-36	29.34	putative ribonuclease H protein [Vitis vinifera]	[more]
RVW70235.1	2.4e-36	27.60	LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]	[more]

Pages

BLAST of Spg007043 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C2F6	3.0e-18	27.55	Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]

BLAST of Spg007043 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A5BCI7	1.0e-37	28.14	Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VI...	[more]
A5BCI7	3.6e-14	44.09	Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VI...	[more]
A0A438CWE0	5.4e-18	44.04	Putative ribonuclease H protein OS=Vitis vinifera OX=29760 GN=VvCHDh000004_278 P...	[more]
A0A438GDE7	1.2e-36	27.60	LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=Pol_...	[more]
A0A438GDE7	1.0e-13	41.94	LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=Pol_...	[more]

BLAST of Spg007043 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10	Endonuclease/exonuclease/phosphatase	coord: 31..216 e-value: 3.2E-7 score: 32.3
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 69..154
None	No IPR available	PANTHER	PTHR36617:SF4	SUBFAMILY NOT NAMED	coord: 217..392
None	No IPR available	PANTHER	PTHR36617	PROTEIN, PUTATIVE-RELATED	coord: 217..392

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg007043.1	Spg007043.1	mRNA