Spg007024 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg007024
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	scaffold9: 48038279 .. 48043488 (+)
RNA-Seq Expression	Spg007024
Synteny	Spg007024

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAAAGTACATGGACTAAATTGTTACATATGAAAGTTCATGGACTAAATTGTCACAAAATTGAAATTATAATGATTAAATTGTTACAAATCAAAGTTCTGGTACTAAATTGTTACTTTCACGAAAGTTCAACGACCAAAAGTGATTTTTAAACTATATATTTTTAGTCTTTTACTTTTGAAATTTGTGCAAATAATTCATTTATTTACTCTATCTTATTTCAGCTTTGAAATACTGCATGCTCGTTGGGCTATGTTAGCATCCCTGGGTGCTTTAATTCCAGAGATCTTAGATATTTTTGGAGCTTTTCATTTCACTGAACCCATCTGGTGGCGAGTGGGCTATTCAAAACTTAAGGTTTGTTTTCCATCTCCTGGTCAACCATCTCTCTGGATATTTATTACATGGAATCTTTCTCGTGTGTCTGCATGTTTTGTTTCTATATTTTTACCCTTCTGTCTGGTTCTTCAATTGTTGTTTATCTTACTGCTTCTGTTCAATCATGTTTTATTTTGGAGTCTAGCCTTTCACGTCTGCCTTTATTAATGAAATCAAATAATATTGCTCAGTGTCTCGTTCAAGTGCCAGAAATTATGACTTCATGTCTTTCACTATCGTGATAAGCTTGAGTTTGGTTGCATCTTTACTTCTATTTCAATCACTCTTTCATTATTTTGTTTCAATAAATTAGGCCATGTGCATTTTTCTTGTGCCATAACAAAGGGTTTCTGGGGCTGATGTCACAACACTCTGTGCTCAACTGCTCATATGTTTGTGTAACCCTGAGTTTTCTAGGCTAGGCTCGGTGCGCCTTGGAGTGGACTATTCTTTTTGGGAAGACTAGGTTGACAAACAATTGTCTATCACGAGACCATCACTCAAATGGCTGCCTCGGTCACCTTTCAGTCATATTTTTGTTTTCTTTGACCACTTCTTATTGCCTTTTACCTTTTTTCTTTGACCACCTCTTATTACCTTTTATAGCCTTTTGTGCCTTACTGAAGGAATGCAATCTTCTGAAATATTTTAATATTTCGGACTAAAAAACATTCTTTTTGATTCATTATGTCTTGAAGATACAACTGCCTGTCAAAACAATTTTATTGAAAACAAATTTATTTGTGCCCGATTATATTTGTGTTTATCATGCATTCCTATTTTCTATTTACTATATAATATGTATCTAGAAAACTCTTGCCCCCAGGTAAGCAAAAGTTTGTGGCAATAGAGTGGGCATTGAAAATATTGGTACAAGTCTCGCTAATGAATATTAGGAAGCAAAATACTCCAAGGCTGAAGTACAGCTGTAGCAAGATGATAATATTGGCACTTATTCCATTCTAGTAGTGCTAATTCTGAGTTTGCGTTCAATTCTATTTTTTTAGGAAAGCCCTACTAAATGCCCTCATCCCATTATTGTGTTGCTAATGTTGATTGTATCTTTTTGTGTCGTGACAAGCTTGACTCTGGTTGCGACCTTTCTTCTATTGCAATTGGTCTTTTGTTACTTTTCTCATTGAAATGGGTAGTTATGATCACTGTTCTGATACATATTTACGCAAATTGGTATAAGAACTCTTTAATGATACTTGAACACATAACATGCCTGGCAATTTCAGAGGTTTGACTATCCTACTCTTTCTCTAGAACTGTCCAGCCTTCTCCTTTAATTTCTCTACTCTATCAAATAACTTCGTAAGTAGCCAAGTGCCTACCTCAATAGTAGTTTATTAGTTTTTTTTCCCTTTCTTTTTTGAAATTGGATACCTAGTAATTTATTAATTGTTCATAAAATGAAACTGAAATTGATAACAGTAACACATTGAAAAATACATAGAACATATTAACACCAGAAATTAAATAGTTTTGTAAAGGATACCCTGTAACTATGAAACTTAGATATAAATCAAAGTTTTAACTTTTGAGGAGCAACCAATACCAGAACTTGTAGAATTTAAGTGAAAAAGTTGGGACTGAGTATCACATAATTTTATTGGTAGATTTGCCTCTCTTGATTTGAGCTGATGTTTGCATTTTAGGATATAGCAACAGCTAACAGCGATCCAAAGAAGTGAATTGTGACATAATTCTAATACATTATACTTAGCAGTTAACTCTAGACAGACATTGAAAGAGGTAGGAAATGAGAGAAGAAAAGTACTCTGAAATGGTGTGTAGTATAAGGTGGAAGAATCTTTCATTTGGCTTCAAGAAAGGAAAGATTATTAATTATAAAGTAAGTTGGAGTTAAAAAAAATTTGAAATCCAAAGTTAATTTTGATAATATATATATATATATATTTGATAAATAACCGGACTTTCATTGAGAAAAAATGAAAGAATACAAGGACATCTAAAAAAACCAAGCCCCAAGGAAAATGAACCCAACTACAGAAAGAGTTTCCAATCAATCAAAATAAGACCTAATGGGTAATTACAAAAAGTCTTAGAGATTAAGACCCATAGAGAAACGAAAAATCTAGTATTAGCCCAAACCTCACAAGGAAGTCTCTTGGCCCCACTAAAAATTCTATTATTCCTCTCCCCCATAAACCCCAAAGAATACTACAAACACTAGCATGCCTCAAAAACTTTCCCTTCTCCTGCTACGGTGGATGGAGGAGGAACTCCTCGATCATCTCCTTGCAATGATGTTGGTAAAAAATTTGAAACCCCGAAAACCTCAAAGAAGAGGCTTCAAACTGAGCAAACAAATCACAACCCCACAACAAATAATCAAGATCATCCTCTGCCCTTCCTTATCTAAAAAAAGATCTTCCTCCGCCTTCCACGGAGAATGCAACAAAAAGGGCCAACCACAGGGGGCATCACTCTTGATAGCTTTTCAAAAGTGTTAACATGACCTAGGATGACCTGCCAAACGAAGAACAAAACTTTTTGGAACTTTAACCTTACACAAACACGAAAAAACAAACTCTCTAATCGGGGAGAGATTTACCAAAAATTGAAAGAACGAGCTGCAAGAAAAGCCCCCAGAGGGGTTGGAACTCCAAAAGTGAATATCCCTCCTATTTGTCTAAAATTAACCCCCTCTAAGAAAGATAGGAGGGCCAGGATGTCCGTGGTTTCTCTATCAGATAACAGATGATGAAGTTAATTTTGATAATATTAATTAATTCCGGAATTATTGTCTATAAGTGGAGGGACCAAAACTTCAATTCCAACATTTCATATTACCTTCTATGAACTCCATGGGAGTGTGTAGTTTCTCATTCATTCATCCTAATTTTCCAGCACTTGTAACTGACTCTTTTTCATCTTACTGTGTGTGTTCTCTTTCCACCAGGGAGATACACTCGACTATCTTGGAATACCAGGGCTTCATTTAGCTGGAAGCCAAGGAGTGATTGTCATTGCAATTTGCCAAGCCATTTTGATGGTAACCTATATCAAACAATCTTATTTTCTTTCTTCAGACATTTTCCTTTACTCATATCCATTGGGCACTTTAATTAAATGGTTGGGGGGAAGCGTGACATTATAACCTGTCCTGTTTTGGGTTAAACCTATTCTAAGGTGGGTTAGTTAACCTCAATCAAATTCCACCCCGTTCCCATCAAAACACTGGTTTGGTTCTGCTGCAGTTTCTTCAACGAGCTTTGGCCCTTGATAAGCTTGTTTAGGAATTAGGAATTGAATTTTGCATTTTGGAGATTACACAAGTTAGAAAAAATTAGATAGTTTAACTGTTAAGTTGAGCGTATAAACTATCATATGTTTGATTGTTCTTACAACTGTATGATGTAAATTAACATGTAAATAGGTTGGACCCGAGTATGCAAGATATTGTGGCATAGAGGCATTGGAGCCTCTGGGAATATATCTGCCGGGGGATATAAATTATCCTGGTGGTGTGTTGTTTGACCCCTTGAACCTGTCCAAGGATGCTGCAGCTTTTGAGGAACTTAAGGTAAAAGAGATTAAAAATGGGCGGTTAGCCATGGTTGCCTGGCTTGGATTTTACAGTCAAGCAGCATTGACGGGTAAGGGACCAGTCCAAAACCTTCTCGAACACATTTCAGATCCTTTCCACAAAAACATTCTTTCCCTGCTCAACTCTTCAAAGTAGTTAATAGTTAGAATTTGGAGTATAAACTATAAAGTATAGTTTCTTAAAATCTGTATAGTGTTCTTAAGGGATGAGAAATCTATCATATGGCTGTTCTAGATGGGTGTTTGTTGCTCGATGAGTCGATACTTGATGGTGTGGCTATTATATCTATCTATCTTATATCAAGTATCTATGTGATAACATTTTTTTAGATGAGGTAGAAAGTTTATAGATAATGATTCAAGTAAAAAGCCATTGATTAATTTTCATATGGAGCTAAAAGTTGGAGTAGTTGTACGAATTGCTGTCAGATGAGTGATTAGTGCTTACGAACCTATGGTTAGCTTTTTAGCAGAATGGATTACCAGTACTACTATCCCGAGACATTTCTGGAAGGAACCCACTGCCCACATTTTGGGACTGGAGGACTTCGGAGCATAACATGATTAATCCCACACGATTTTATTTATATCATATGAGTTGGTAATTTGATTAGTTCAAAGGAATTAAGAAACCGAAGGCATAGGCCACAATGCATAATTGAGGGTGCTGGTGAACCTGATGTGAGCCTAGTAAAGTAACCCATCTTCAGCCCGTTCCTTCTTTCCCATTTGTTTGATTGAGGGGTCCCTCTTGCAATTGTGAATTGCCCCATTCTATTGGGATATTTCATATTCATGACATCCCCTTGCCTTTCTTCCTTCTTACAGCATTTCATTCAGGATTTGTTGGGTTGAAATAAGAGGCTCCAAACTGGCTAAGTCTAAGTGTAGGTCTACTGCTACCATAGCTTTTTAAGGAATGAGTATAGCAATACCTCCATAGGGAAAAGGTCCCTACAAAATGACGGAGAGGGAATAATTAGGAGTCTTGATCAGCCTTATAAAGTATAGTTGTGGGAAACCATATGGTTGGTGTCCATTATGCTTATGCTTTTGTAAGAATGTTGACACGCCCTCCACAGGCTTCTAAGTCAACTGGCGTATACGGATTGGATCCAGCCAGAGCCAATTGGGATGGGACCTCGATCTGCATGCGAGGCAACACACGCTTCAACGTGGTCCTCTGCATCTTCATCTTGTTTATTCTATTCCACCATCGACCCGGTTAGGCTTGACAATAAGAACCAGTTGTGA

mRNA sequence

ATGTTAAACTTTGAAATACTGCATGCTCGTTGGGCTATGTTAGCATCCCTGGGTGCTTTAATTCCAGAGATCTTAGATATTTTTGGAGCTTTTCATTTCACTGAACCCATCTGGTGGCGAGTGGGCTATTCAAAACTTAAGGGAGATACACTCGACTATCTTGGAATACCAGGGCTTCATTTAGCTGGAAGCCAAGGAGTGATTGTCATTGCAATTTGCCAAGCCATTTTGATGGTTGGACCCGAGTATGCAAGATATTGTGGCATAGAGGCATTGGAGCCTCTGGGAATATATCTGCCGGGGGATATAAATTATCCTGGTGGTGTGTTGTTTGACCCCTTGAACCTGTCCAAGGATGCTGCAGCTTTTGAGGAACTTAAGGTAAAAGAGATTAAAAATGGGCGGTTAGCCATGGTTGCCTGGCTTGGATTTTACAGTCAAGCAGCATTGACGGGTAAGGGACCAGTCCAAAACCTTCTCGAACACATTTCAGATCCTTTCCACAAAAACATTCTTTCCCTGCTCAACTCTTCAAATTCAAAGGAATTAAGAAACCGAAGGCATAGGCCACAATGCATAATTGAGGGTGCTGGTGAACCTGATGTGAGCCTAGTAAAGCTTCTAAGTCAACTGGCGTATACGGATTGGATCCAGCCAGAGCCAATTGGGATGGGACCTCGATCTGCATGCGAGGCAACACACGCTTCAACGTGGTCCTCTGCATCTTCATCTTGTTTATTCTATTCCACCATCGACCCGGTTAGGCTTGACAATAAGAACCAGTTGTGA

Coding sequence (CDS)

ATGTTAAACTTTGAAATACTGCATGCTCGTTGGGCTATGTTAGCATCCCTGGGTGCTTTAATTCCAGAGATCTTAGATATTTTTGGAGCTTTTCATTTCACTGAACCCATCTGGTGGCGAGTGGGCTATTCAAAACTTAAGGGAGATACACTCGACTATCTTGGAATACCAGGGCTTCATTTAGCTGGAAGCCAAGGAGTGATTGTCATTGCAATTTGCCAAGCCATTTTGATGGTTGGACCCGAGTATGCAAGATATTGTGGCATAGAGGCATTGGAGCCTCTGGGAATATATCTGCCGGGGGATATAAATTATCCTGGTGGTGTGTTGTTTGACCCCTTGAACCTGTCCAAGGATGCTGCAGCTTTTGAGGAACTTAAGGTAAAAGAGATTAAAAATGGGCGGTTAGCCATGGTTGCCTGGCTTGGATTTTACAGTCAAGCAGCATTGACGGGTAAGGGACCAGTCCAAAACCTTCTCGAACACATTTCAGATCCTTTCCACAAAAACATTCTTTCCCTGCTCAACTCTTCAAATTCAAAGGAATTAAGAAACCGAAGGCATAGGCCACAATGCATAATTGAGGGTGCTGGTGAACCTGATGTGAGCCTAGTAAAGCTTCTAAGTCAACTGGCGTATACGGATTGGATCCAGCCAGAGCCAATTGGGATGGGACCTCGATCTGCATGCGAGGCAACACACGCTTCAACGTGGTCCTCTGCATCTTCATCTTGTTTATTCTATTCCACCATCGACCCGGTTAGGCTTGACAATAAGAACCAGTTGTGA

Protein sequence

MLNFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILSLLNSSNSKELRNRRHRPQCIIEGAGEPDVSLVKLLSQLAYTDWIQPEPIGMGPRSACEATHASTWSSASSSCLFYSTIDPVRLDNKNQL

Homology

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BLAST of Spg007024 vs. NCBI nr
Match: XP_022936160.1 (chlorophyll a-b binding protein 7, chloroplastic [Cucurbita moschata])

HSP 1 Score: 360.5 bits (924), Expect = 1.2e-95
Identity = 171/176 (97.16%), Postives = 174/176 (98.86%), Query Frame = 0


Query: 3   NFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLA 62
           NFEILHARWAMLASLGAL+PEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLA
Sbjct: 162 NFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLA 221

Query: 63  GSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAA 122
           GSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAA
Sbjct: 222 GSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAA 281

Query: 123 FEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILSLLNSS 179
           FEELKVKEIKNGRLAMVAWLGFYSQAALTGKGP+QNLLEH+SDPFH N LSLLNSS
Sbjct: 282 FEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPIQNLLEHVSDPFHNNFLSLLNSS 337

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BLAST of Spg007024 vs. NCBI nr
Match: XP_023521109.1 (chlorophyll a-b binding protein 7, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 360.5 bits (924), Expect = 1.2e-95
Identity = 171/176 (97.16%), Postives = 174/176 (98.86%), Query Frame = 0


Query: 3   NFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLA 62
           NFEILHARWAMLASLGAL+PEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLA
Sbjct: 162 NFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLA 221

Query: 63  GSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAA 122
           GSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAA
Sbjct: 222 GSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAA 281

Query: 123 FEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILSLLNSS 179
           FEELKVKEIKNGRLAMVAWLGFYSQAALTGKGP+QNLLEH+SDPFH N LSLLNSS
Sbjct: 282 FEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPIQNLLEHVSDPFHNNFLSLLNSS 337

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BLAST of Spg007024 vs. NCBI nr
Match: XP_008453032.2 (PREDICTED: chlorophyll a-b binding protein of LHCII type 1 isoform X1 [Cucumis melo])

HSP 1 Score: 360.1 bits (923), Expect = 1.6e-95
Identity = 172/176 (97.73%), Postives = 174/176 (98.86%), Query Frame = 0


Query: 3   NFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLA 62
           NFEILHARWAMLASLGAL+PEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLA
Sbjct: 196 NFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLA 255

Query: 63  GSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAA 122
           GSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAA
Sbjct: 256 GSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAA 315

Query: 123 FEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILSLLNSS 179
           FEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLL+HISDPFH N LSLLNSS
Sbjct: 316 FEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLDHISDPFHNNFLSLLNSS 371

[Close]

BLAST of Spg007024 vs. NCBI nr
Match: XP_004145567.1 (chlorophyll a-b binding protein 7, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 360.1 bits (923), Expect = 1.6e-95
Identity = 172/179 (96.09%), Postives = 176/179 (98.32%), Query Frame = 0


Query: 3   NFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLA 62
           NFEILHARWAMLASLGAL+PEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLA
Sbjct: 160 NFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLA 219

Query: 63  GSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAA 122
           GSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAA
Sbjct: 220 GSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAA 279

Query: 123 FEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILSLLNSSNSK 182
           FEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLL+HI+DPFH N LSLLNSS S+
Sbjct: 280 FEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLDHIADPFHNNFLSLLNSSFSR 338

[Close]

BLAST of Spg007024 vs. NCBI nr
Match: TYK19913.1 (chlorophyll a-b binding protein of LHCII type 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 360.1 bits (923), Expect = 1.6e-95
Identity = 172/176 (97.73%), Postives = 174/176 (98.86%), Query Frame = 0


Query: 3   NFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLA 62
           NFEILHARWAMLASLGAL+PEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLA
Sbjct: 95  NFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLA 154

Query: 63  GSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAA 122
           GSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAA
Sbjct: 155 GSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAA 214

Query: 123 FEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILSLLNSS 179
           FEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLL+HISDPFH N LSLLNSS
Sbjct: 215 FEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLDHISDPFHNNFLSLLNSS 270

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BLAST of Spg007024 vs. ExPASy Swiss-Prot
Match: Q9C9K1 (Chlorophyll a-b binding protein 7, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCB7 PE=2 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 1.8e-86
Identity = 143/175 (81.71%), Postives = 163/175 (93.14%), Query Frame = 0


Query: 3   NFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLA 62
           NFEILHARWAMLA+LGALIPE+ D+ G FHF EP+WWRVGYSKL+G+TL+YLGIPGLH+A
Sbjct: 153 NFEILHARWAMLAALGALIPEVFDLTGTFHFAEPVWWRVGYSKLQGETLEYLGIPGLHVA 212

Query: 63  GSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAA 122
           GSQGVIVIAICQ +LMVGPEYARYCGIEALEPLGIYLPGDINYPGG LFDPLNLS+D  A
Sbjct: 213 GSQGVIVIAICQVLLMVGPEYARYCGIEALEPLGIYLPGDINYPGGTLFDPLNLSEDPVA 272

Query: 123 FEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILSLLNS 178
           FE+LKVKEIKNGRLAMVAWLGFY+QAA TGKGPVQNL++H+SDP H N++++L +
Sbjct: 273 FEDLKVKEIKNGRLAMVAWLGFYAQAAFTGKGPVQNLVDHVSDPLHNNLIAMLQT 327

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BLAST of Spg007024 vs. ExPASy Swiss-Prot
Match: P12470 (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia OX=4092 GN=CABE PE=3 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.8e-33
Identity = 80/169 (47.34%), Postives = 104/169 (61.54%), Query Frame = 0


Query: 5   EILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGS 64
           E++H RWAML +LG + PE+L   G   F E +W++ G        LDYLG P   L  +
Sbjct: 99  EVIHCRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPS--LVHA 158

Query: 65  QGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFE 124
           Q ++ I  CQ +LM   E  R  G    EPLG  +  D  YPGG  FDPL L++D  AF 
Sbjct: 159 QSILAIWACQVVLMGAVEGYRVAG----EPLGEVV--DPLYPGG-SFDPLGLAEDPEAFA 218

Query: 125 ELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILS 174
           ELKVKEIKNGRLAM +  GF+ QA +TGKGP++NL +H++DP + N  S
Sbjct: 219 ELKVKEIKNGRLAMFSMFGFFVQALVTGKGPLENLADHLADPVNNNAWS 257

[Close]

BLAST of Spg007024 vs. ExPASy Swiss-Prot
Match: Q9XF87 (Chlorophyll a-b binding protein 2.4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCB2.4 PE=1 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 3.0e-33
Identity = 81/166 (48.80%), Postives = 103/166 (62.05%), Query Frame = 0


Query: 5   EILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGS 64
           E++H+RWAML +LG   PEIL   G   F E +W++ G        LDYLG P  +L  +
Sbjct: 99  EVIHSRWAMLGALGCTFPEILSKNGV-KFGEAVWFKAGSQIFSEGGLDYLGNP--NLIHA 158

Query: 65  QGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFE 124
           Q ++ I  CQ +LM   E  R  G     PLG  L  D  YPGG  FDPLNL++D  AF 
Sbjct: 159 QSILAIWACQVVLMGFIEGYRIGG----GPLGEGL--DPLYPGGA-FDPLNLAEDPEAFS 218

Query: 125 ELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKN 171
           ELKVKE+KNGRLAM +  GF+ QA +TGKGP++NL +HI+DP   N
Sbjct: 219 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHIADPVANN 254

[Close]

BLAST of Spg007024 vs. ExPASy Swiss-Prot
Match: P27523 (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare OX=4513 GN=LHBC PE=2 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 5.2e-33
Identity = 72/166 (43.37%), Postives = 99/166 (59.64%), Query Frame = 0


Query: 5   EILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGS 64
           E++H RWAML +LG + PE+L  +    F EP+W++ G        LDYLG P  +L  +
Sbjct: 99  EVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNP--NLVHA 158

Query: 65  QGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFE 124
           Q ++ +   Q +LM   E  R  G++ +        G+  YPGG  FDPL L+ D   F 
Sbjct: 159 QSILAVLGFQVLLMGLVEGFRINGLDGVG------EGNDLYPGGQYFDPLGLADDPVTFA 218

Query: 125 ELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKN 171
           ELKVKEIKNGRLAM +  GF+ QA +TGKGP++NL +H+ DP   N
Sbjct: 219 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLFDHLDDPVANN 256

[Close]

BLAST of Spg007024 vs. ExPASy Swiss-Prot
Match: P12469 (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia OX=4092 GN=CABC PE=3 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 6.7e-33
Identity = 79/166 (47.59%), Postives = 103/166 (62.05%), Query Frame = 0


Query: 5   EILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGS 64
           E++H RWAML +LG + PE+L   G   F E +W++ G        LDYLG P   L  +
Sbjct: 100 EVIHCRWAMLGALGCVFPELLARNGV-KFGEAVWFKGGSQIFSQGGLDYLGNPS--LVHA 159

Query: 65  QGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFE 124
           Q ++ I  CQ +LM   E  R  G    EPLG  +  D  YPGG  FDPL L++D  AF 
Sbjct: 160 QSILAIWACQVVLMGAVEGYRVAG----EPLGEVV--DPLYPGG-SFDPLGLAEDPEAFA 219

Query: 125 ELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKN 171
           ELKVKEIKNGRLAM +  GF+ QA +TGKGP++NL +H++DP + N
Sbjct: 220 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255

[Close]

BLAST of Spg007024 vs. ExPASy TrEMBL
Match: A0A6J1FCV0 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111442842 PE=3 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 5.8e-96
Identity = 171/176 (97.16%), Postives = 174/176 (98.86%), Query Frame = 0


Query: 3   NFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLA 62
           NFEILHARWAMLASLGAL+PEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLA
Sbjct: 162 NFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLA 221

Query: 63  GSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAA 122
           GSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAA
Sbjct: 222 GSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAA 281

Query: 123 FEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILSLLNSS 179
           FEELKVKEIKNGRLAMVAWLGFYSQAALTGKGP+QNLLEH+SDPFH N LSLLNSS
Sbjct: 282 FEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPIQNLLEHVSDPFHNNFLSLLNSS 337

[Close]

BLAST of Spg007024 vs. ExPASy TrEMBL
Match: A0A5D3D8P8 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00250 PE=3 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 7.6e-96
Identity = 172/176 (97.73%), Postives = 174/176 (98.86%), Query Frame = 0


Query: 3   NFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLA 62
           NFEILHARWAMLASLGAL+PEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLA
Sbjct: 95  NFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLA 154

Query: 63  GSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAA 122
           GSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAA
Sbjct: 155 GSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAA 214

Query: 123 FEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILSLLNSS 179
           FEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLL+HISDPFH N LSLLNSS
Sbjct: 215 FEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLDHISDPFHNNFLSLLNSS 270

[Close]

BLAST of Spg007024 vs. ExPASy TrEMBL
Match: A0A0A0L0U5 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_4G664570 PE=3 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 7.6e-96
Identity = 172/179 (96.09%), Postives = 176/179 (98.32%), Query Frame = 0


Query: 3   NFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLA 62
           NFEILHARWAMLASLGAL+PEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLA
Sbjct: 96  NFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLA 155

Query: 63  GSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAA 122
           GSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAA
Sbjct: 156 GSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAA 215

Query: 123 FEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILSLLNSSNSK 182
           FEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLL+HI+DPFH N LSLLNSS S+
Sbjct: 216 FEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLDHIADPFHNNFLSLLNSSFSR 274

[Close]

BLAST of Spg007024 vs. ExPASy TrEMBL
Match: A0A1S3BWE1 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103493859 PE=3 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 7.6e-96
Identity = 172/176 (97.73%), Postives = 174/176 (98.86%), Query Frame = 0


Query: 3   NFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLA 62
           NFEILHARWAMLASLGAL+PEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLA
Sbjct: 196 NFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLA 255

Query: 63  GSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAA 122
           GSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAA
Sbjct: 256 GSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAA 315

Query: 123 FEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILSLLNSS 179
           FEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLL+HISDPFH N LSLLNSS
Sbjct: 316 FEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLDHISDPFHNNFLSLLNSS 371

[Close]

BLAST of Spg007024 vs. ExPASy TrEMBL
Match: A0A6J1IGJ6 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111474607 PE=3 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.7e-95
Identity = 170/176 (96.59%), Postives = 174/176 (98.86%), Query Frame = 0


Query: 3   NFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLA 62
           NFEILHARWAMLASLGAL+PEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLA
Sbjct: 162 NFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLA 221

Query: 63  GSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAA 122
           GSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLS+DAAA
Sbjct: 222 GSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSEDAAA 281

Query: 123 FEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILSLLNSS 179
           FEELKVKEIKNGRLAMVAWLGFYSQAALTGKGP+QNLLEH+SDPFH N LSLLNSS
Sbjct: 282 FEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPIQNLLEHVSDPFHNNFLSLLNSS 337

[Close]

BLAST of Spg007024 vs. TAIR 10
Match: AT1G76570.1 (Chlorophyll A-B binding family protein )

HSP 1 Score: 320.5 bits (820), Expect = 1.3e-87
Identity = 143/175 (81.71%), Postives = 163/175 (93.14%), Query Frame = 0


Query: 3   NFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLA 62
           NFEILHARWAMLA+LGALIPE+ D+ G FHF EP+WWRVGYSKL+G+TL+YLGIPGLH+A
Sbjct: 153 NFEILHARWAMLAALGALIPEVFDLTGTFHFAEPVWWRVGYSKLQGETLEYLGIPGLHVA 212

Query: 63  GSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAA 122
           GSQGVIVIAICQ +LMVGPEYARYCGIEALEPLGIYLPGDINYPGG LFDPLNLS+D  A
Sbjct: 213 GSQGVIVIAICQVLLMVGPEYARYCGIEALEPLGIYLPGDINYPGGTLFDPLNLSEDPVA 272

Query: 123 FEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILSLLNS 178
           FE+LKVKEIKNGRLAMVAWLGFY+QAA TGKGPVQNL++H+SDP H N++++L +
Sbjct: 273 FEDLKVKEIKNGRLAMVAWLGFYAQAAFTGKGPVQNLVDHVSDPLHNNLIAMLQT 327

[Close]

BLAST of Spg007024 vs. TAIR 10
Match: AT3G27690.1 (photosystem II light harvesting complex gene 2.3 )

HSP 1 Score: 143.7 bits (361), Expect = 2.1e-34
Identity = 81/166 (48.80%), Postives = 103/166 (62.05%), Query Frame = 0


Query: 5   EILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGS 64
           E++H+RWAML +LG   PEIL   G   F E +W++ G        LDYLG P  +L  +
Sbjct: 99  EVIHSRWAMLGALGCTFPEILSKNGV-KFGEAVWFKAGSQIFSEGGLDYLGNP--NLIHA 158

Query: 65  QGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFE 124
           Q ++ I  CQ +LM   E  R  G     PLG  L  D  YPGG  FDPLNL++D  AF 
Sbjct: 159 QSILAIWACQVVLMGFIEGYRIGG----GPLGEGL--DPLYPGGA-FDPLNLAEDPEAFS 218

Query: 125 ELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKN 171
           ELKVKE+KNGRLAM +  GF+ QA +TGKGP++NL +HI+DP   N
Sbjct: 219 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHIADPVANN 254

[Close]

BLAST of Spg007024 vs. TAIR 10
Match: AT5G54270.1 (light-harvesting chlorophyll B-binding protein 3 )

HSP 1 Score: 141.0 bits (354), Expect = 1.4e-33
Identity = 72/166 (43.37%), Postives = 99/166 (59.64%), Query Frame = 0


Query: 5   EILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGS 64
           E++H RWAML + G + PE+L  +    F EP+W++ G        LDYLG P  +L  +
Sbjct: 96  EVIHGRWAMLGAFGCITPEVLQKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNP--NLVHA 155

Query: 65  QGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFE 124
           Q ++ +   Q ILM   E  R  G++ +        G+  YPGG  FDPL L+ D   F 
Sbjct: 156 QSILAVLGFQVILMGLVEGFRINGLDGVG------EGNDLYPGGQYFDPLGLADDPVTFA 215

Query: 125 ELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKN 171
           ELKVKEIKNGRLAM +  GF+ QA +TGKGP++NLL+H+ +P   N
Sbjct: 216 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANN 253

[Close]

BLAST of Spg007024 vs. TAIR 10
Match: AT2G05100.1 (photosystem II light harvesting complex gene 2.1 )

HSP 1 Score: 139.8 bits (351), Expect = 3.1e-33
Identity = 80/169 (47.34%), Postives = 103/169 (60.95%), Query Frame = 0


Query: 5   EILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGS 64
           E++H+RWAML +LG   PEIL   G   F E +W++ G        LDYLG P  +L  +
Sbjct: 98  EVIHSRWAMLGALGCTFPEILSKNGV-KFGEAVWFKAGSQIFSEGGLDYLGNP--NLIHA 157

Query: 65  QGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFE 124
           Q ++ I   Q +LM   E  R  G     PLG  L  D  YPGG  FDPLNL++D  AF 
Sbjct: 158 QSILAIWAVQVVLMGFIEGYRIGG----GPLGEGL--DPLYPGGA-FDPLNLAEDPEAFS 217

Query: 125 ELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILS 174
           ELKVKE+KNGRLAM +  GF+ QA +TGKGP++NL +H++DP   N  S
Sbjct: 218 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANNAWS 256

[Close]

BLAST of Spg007024 vs. TAIR 10
Match: AT2G05070.1 (photosystem II light harvesting complex gene 2.2 )

HSP 1 Score: 139.8 bits (351), Expect = 3.1e-33
Identity = 80/169 (47.34%), Postives = 103/169 (60.95%), Query Frame = 0


Query: 5   EILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGS 64
           E++H+RWAML +LG   PEIL   G   F E +W++ G        LDYLG P  +L  +
Sbjct: 98  EVIHSRWAMLGALGCTFPEILSKNGV-KFGEAVWFKAGSQIFSEGGLDYLGNP--NLIHA 157

Query: 65  QGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFE 124
           Q ++ I   Q +LM   E  R  G     PLG  L  D  YPGG  FDPLNL++D  AF 
Sbjct: 158 QSILAIWAVQVVLMGFIEGYRIGG----GPLGEGL--DPLYPGGA-FDPLNLAEDPEAFS 217

Query: 125 ELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILS 174
           ELKVKE+KNGRLAM +  GF+ QA +TGKGP++NL +H++DP   N  S
Sbjct: 218 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANNAWS 256

The following BLAST results are available for this feature:

BLAST of Spg007024 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022936160.1	1.2e-95	97.16	chlorophyll a-b binding protein 7, chloroplastic [Cucurbita moschata]	[more]
XP_023521109.1	1.2e-95	97.16	chlorophyll a-b binding protein 7, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_008453032.2	1.6e-95	97.73	PREDICTED: chlorophyll a-b binding protein of LHCII type 1 isoform X1 [Cucumis m...	[more]
XP_004145567.1	1.6e-95	96.09	chlorophyll a-b binding protein 7, chloroplastic isoform X1 [Cucumis sativus]	[more]
TYK19913.1	1.6e-95	97.73	chlorophyll a-b binding protein of LHCII type 1 isoform X1 [Cucumis melo var. ma...	[more]

BLAST of Spg007024 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9K1	1.8e-86	81.71	Chlorophyll a-b binding protein 7, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
P12470	1.8e-33	47.34	Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia OX...	[more]
Q9XF87	3.0e-33	48.80	Chlorophyll a-b binding protein 2.4, chloroplastic OS=Arabidopsis thaliana OX=37...	[more]
P27523	5.2e-33	43.37	Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulg...	[more]
P12469	6.7e-33	47.59	Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia OX...	[more]

BLAST of Spg007024 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FCV0	5.8e-96	97.16	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A5D3D8P8	7.6e-96	97.73	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]
A0A0A0L0U5	7.6e-96	96.09	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa...	[more]
A0A1S3BWE1	7.6e-96	97.73	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1IGJ6	1.7e-95	96.59	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]

BLAST of Spg007024 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G76570.1	1.3e-87	81.71	Chlorophyll A-B binding family protein	[more]
AT3G27690.1	2.1e-34	48.80	photosystem II light harvesting complex gene 2.3	[more]
AT5G54270.1	1.4e-33	43.37	light-harvesting chlorophyll B-binding protein 3	[more]
AT2G05100.1	3.1e-33	47.34	photosystem II light harvesting complex gene 2.1	[more]
AT2G05070.1	3.1e-33	47.34	photosystem II light harvesting complex gene 2.2	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 1..175 e-value: 2.1E-53 score: 183.1
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 4..148 e-value: 5.3E-30 score: 105.1
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 3..171
None	No IPR available	PANTHER	PTHR21649:SF74	CHLOROPHYLL A-B BINDING PROTEIN 7, CHLOROPLASTIC	coord: 3..171
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 4..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg007024.1	Spg007024.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009765	photosynthesis, light harvesting
biological_process	GO:0018298	protein-chromophore linkage
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding