Spg006954 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAATCCGTAAATTGCCTCCTCTCAGTCTCCAATTCCGCTCCCTTCCTCCCCCCTCCGATCTCGCCTTCCGCCTCCCGCCGTCGCTGTCGCACCGCCGTGACTGTTACGGCGTCGTCTCGATCGAGAGAGGCCGACAACAACAATTACTACGCCAGCGGAAAGCTCGTCGACGAGAGCATGATCGTGCTCCGGAAGCGGATCCACGAGATCAAGATGGCCGAGCAGAGCCACGATCCGCCGGCGGATTGGCTCGAGTGGGAGAAACGCTGCTATTCGGACTACGACTCGCACATCTGTGAAGCCCTTGGCTACCTTCAGTCGCACTTGATGAACACCAGGCCCAGCGTCGCCTTGGGAATGCTCGTTCTCGTTTCTCTCAGTGTTCCGGTCTCCTCCGCCGTCGTTCTCCACCGCTTGATCGAGATCGCCGCCGCGCTTCTCCGTCTCTGTTAG ATGAAATCCGTAAATTGCCTCCTCTCAGTCTCCAATTCCGCTCCCTTCCTCCCCCCTCCGATCTCGCCTTCCGCCTCCCGCCGTCGCTGTCGCACCGCCGTGACTGTTACGGCGTCGTCTCGATCGAGAGAGGCCGACAACAACAATTACTACGCCAGCGGAAAGCTCGTCGACGAGAGCATGATCGTGCTCCGGAAGCGGATCCACGAGATCAAGATGGCCGAGCAGAGCCACGATCCGCCGGCGGATTGGCTCGAGTGGGAGAAACGCTGCTATTCGGACTACGACTCGCACATCTGTGAAGCCCTTGGCTACCTTCAGTCGCACTTGATGAACACCAGGCCCAGCGTCGCCTTGGGAATGCTCGTTCTCGTTTCTCTCAGTGTTCCGGTCTCCTCCGCCGTCGTTCTCCACCGCTTGATCGAGATCGCCGCCGCGCTTCTCCGTCTCTGTTAG ATGAAATCCGTAAATTGCCTCCTCTCAGTCTCCAATTCCGCTCCCTTCCTCCCCCCTCCGATCTCGCCTTCCGCCTCCCGCCGTCGCTGTCGCACCGCCGTGACTGTTACGGCGTCGTCTCGATCGAGAGAGGCCGACAACAACAATTACTACGCCAGCGGAAAGCTCGTCGACGAGAGCATGATCGTGCTCCGGAAGCGGATCCACGAGATCAAGATGGCCGAGCAGAGCCACGATCCGCCGGCGGATTGGCTCGAGTGGGAGAAACGCTGCTATTCGGACTACGACTCGCACATCTGTGAAGCCCTTGGCTACCTTCAGTCGCACTTGATGAACACCAGGCCCAGCGTCGCCTTGGGAATGCTCGTTCTCGTTTCTCTCAGTGTTCCGGTCTCCTCCGCCGTCGTTCTCCACCGCTTGATCGAGATCGCCGCCGCGCTTCTCCGTCTCTGTTAG MKSVNCLLSVSNSAPFLPPPISPSASRRRCRTAVTVTASSRSREADNNNYYASGKLVDESMIVLRKRIHEIKMAEQSHDPPADWLEWEKRCYSDYDSHICEALGYLQSHLMNTRPSVALGMLVLVSLSVPVSSAVVLHRLIEIAAALLRLC Homology
BLAST of Spg006954 vs. NCBI nr
Match: KAG7032552.1 (hypothetical protein SDJN02_06601, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 215.7 bits (548), Expect = 2.7e-52 Identity = 122/159 (76.73%), Postives = 134/159 (84.28%), Query Frame = 0
BLAST of Spg006954 vs. NCBI nr
Match: KAG6601844.1 (hypothetical protein SDJN03_07077, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 214.9 bits (546), Expect = 4.7e-52 Identity = 121/160 (75.62%), Postives = 134/160 (83.75%), Query Frame = 0
BLAST of Spg006954 vs. NCBI nr
Match: XP_023553368.1 (uncharacterized protein LOC111810800 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 214.2 bits (544), Expect = 8.0e-52 Identity = 120/159 (75.47%), Postives = 134/159 (84.28%), Query Frame = 0
BLAST of Spg006954 vs. NCBI nr
Match: XP_022952614.1 (uncharacterized protein LOC111455246 [Cucurbita moschata]) HSP 1 Score: 214.2 bits (544), Expect = 8.0e-52 Identity = 120/158 (75.95%), Postives = 134/158 (84.81%), Query Frame = 0
BLAST of Spg006954 vs. NCBI nr
Match: XP_022989988.1 (uncharacterized protein LOC111487016 [Cucurbita maxima]) HSP 1 Score: 211.8 bits (538), Expect = 4.0e-51 Identity = 119/158 (75.32%), Postives = 133/158 (84.18%), Query Frame = 0
BLAST of Spg006954 vs. ExPASy TrEMBL
Match: A0A6J1GM73 (uncharacterized protein LOC111455246 OS=Cucurbita moschata OX=3662 GN=LOC111455246 PE=4 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 3.9e-52 Identity = 120/158 (75.95%), Postives = 134/158 (84.81%), Query Frame = 0
BLAST of Spg006954 vs. ExPASy TrEMBL
Match: A0A6J1JRY7 (uncharacterized protein LOC111487016 OS=Cucurbita maxima OX=3661 GN=LOC111487016 PE=4 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 1.9e-51 Identity = 119/158 (75.32%), Postives = 133/158 (84.18%), Query Frame = 0
BLAST of Spg006954 vs. ExPASy TrEMBL
Match: A0A6J1JZG1 (uncharacterized protein LOC111489262 OS=Cucurbita maxima OX=3661 GN=LOC111489262 PE=4 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 4.7e-50 Identity = 110/147 (74.83%), Postives = 127/147 (86.39%), Query Frame = 0
BLAST of Spg006954 vs. ExPASy TrEMBL
Match: A0A6J1FMN3 (uncharacterized protein LOC111445338 OS=Cucurbita moschata OX=3662 GN=LOC111445338 PE=4 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 1.4e-49 Identity = 110/145 (75.86%), Postives = 126/145 (86.90%), Query Frame = 0
BLAST of Spg006954 vs. ExPASy TrEMBL
Match: A0A6J1DHC5 (uncharacterized protein LOC111020063 OS=Momordica charantia OX=3673 GN=LOC111020063 PE=4 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 1.0e-44 Identity = 108/152 (71.05%), Postives = 121/152 (79.61%), Query Frame = 0
BLAST of Spg006954 vs. TAIR 10
Match: AT2G01300.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15010.1); Has 73 Blast hits to 73 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 121.3 bits (303), Expect = 6.6e-28 Identity = 58/109 (53.21%), Postives = 85/109 (77.98%), Query Frame = 0
BLAST of Spg006954 vs. TAIR 10
Match: AT1G15010.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01300.1); Has 71 Blast hits to 71 proteins in 13 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 117.1 bits (292), Expect = 1.2e-26 Identity = 56/100 (56.00%), Postives = 79/100 (79.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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