Spg006847 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg006847
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold10: 38578827 .. 38579234 (-)
RNA-Seq ExpressionSpg006847
SyntenySpg006847
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATATCATTTCAACCCCATCAGCTCAAAGCTTGAAGAGGCTATGGAGAAGAAGAAGATACCAAAGGCTAGGAAGTAGCAATGGCCCTACAAGATCATCAAGGAGCTTCAGGCTCGGGCGACTATGGCGGATGAGAAGACGAGCTTCGAAACTGAGATCGAAAATGGCGTCGCCATTGAAATTCCTGACGAAGTTTCACGACGCATATGTCGAAATGATGATGAGGGTGGCCAAGAGTGTGGGGAATATGTATGCCATTGGAGCCTTTGGCAATGGGAAGAGGATCCCAAAACCACAAAATCAAGTCTCTCTGGTGTCTTGTGGTGGAGAACATGTTGATGCCAAGTTGGTCTTGGAAATCTATAACAAACTTGCTGCTTCCAAGAACTTGGCTGCTGCTTTTTGA

mRNA sequence

ATGGATATCATTTCAACCCCATCAGCTCAAAGCTTGAAGAGGCTATGGAGAAGAAGAAGATACCAAAGGCTAGGAAGTAGCAATGGCCCTACAAGATCATCAAGGAGCTTCAGGCTCGGGCGACTATGGCGGATGAGAAGACGAGCTTCGAAACTGAGATCGAAAATGGCGTCGCCATTGAAATTCCTGACGAAGTTTCACGACGCATATGTCGAAATGATGATGAGGGTGGCCAAGAGTGTGGGGAATATGTATGCCATTGGAGCCTTTGGCAATGGGAAGAGGATCCCAAAACCACAAAATCAAGTCTCTCTGGTGTCTTGTGGTGGAGAACATGTTGATGCCAAGTTGGTCTTGGAAATCTATAACAAACTTGCTGCTTCCAAGAACTTGGCTGCTGCTTTTTGA

Coding sequence (CDS)

ATGGATATCATTTCAACCCCATCAGCTCAAAGCTTGAAGAGGCTATGGAGAAGAAGAAGATACCAAAGGCTAGGAAGTAGCAATGGCCCTACAAGATCATCAAGGAGCTTCAGGCTCGGGCGACTATGGCGGATGAGAAGACGAGCTTCGAAACTGAGATCGAAAATGGCGTCGCCATTGAAATTCCTGACGAAGTTTCACGACGCATATGTCGAAATGATGATGAGGGTGGCCAAGAGTGTGGGGAATATGTATGCCATTGGAGCCTTTGGCAATGGGAAGAGGATCCCAAAACCACAAAATCAAGTCTCTCTGGTGTCTTGTGGTGGAGAACATGTTGATGCCAAGTTGGTCTTGGAAATCTATAACAAACTTGCTGCTTCCAAGAACTTGGCTGCTGCTTTTTGA

Protein sequence

MDIISTPSAQSLKRLWRRRRYQRLGSSNGPTRSSRSFRLGRLWRMRRRASKLRSKMASPLKFLTKFHDAYVEMMMRVAKSVGNMYAIGAFGNGKRIPKPQNQVSLVSCGGEHVDAKLVLEIYNKLAASKNLAAAF
Homology
BLAST of Spg006847 vs. NCBI nr
Match: KAG7016737.1 (hypothetical protein SDJN02_21847, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 213.4 bits (542), Expect = 1.2e-51
Identity = 110/131 (83.97%), Postives = 116/131 (88.55%), Query Frame = 0

Query: 1   MDIISTPSAQSLKRLWRRRRYQRLGSSNGPTRSSRSFRLGRLWRMRRRASKLRSKMASPL 60
           MDII+TPSA SLKRLWRRRRYQRLGS  G  R SRSFRLGRLWRMRRRA KLR KMASPL
Sbjct: 1   MDIIATPSALSLKRLWRRRRYQRLGSGTGAAR-SRSFRLGRLWRMRRRAPKLRLKMASPL 60

Query: 61  KFLTKFHDAYVEMMMRVAKSVGNMYAIGAFGNGKRIPKPQNQVSLVSCGGEHVDAKLVLE 120
           K L +FHDAYV+MM RVA +VGNMYAIG FGNGKRIPKP+NQ+SLVSCGGE VDAKLVLE
Sbjct: 61  KVLARFHDAYVKMMTRVANNVGNMYAIGGFGNGKRIPKPRNQISLVSCGGEQVDAKLVLE 120

Query: 121 IYNKLAASKNL 132
           IYNKLA SKNL
Sbjct: 121 IYNKLAVSKNL 130

BLAST of Spg006847 vs. NCBI nr
Match: XP_022152306.1 (uncharacterized protein LOC111020054 [Momordica charantia])

HSP 1 Score: 213.4 bits (542), Expect = 1.2e-51
Identity = 112/138 (81.16%), Postives = 122/138 (88.41%), Query Frame = 0

Query: 1   MDIISTPSAQSLKRLWRRRRYQRLGSSNGPTRSSRSFRLGRLWRMRRRASKLRSKMASPL 60
           M+II+TPS++S++R WRRR+YQRLGSSNGPTR SRSFRLGRLWRMRR A +LR KMASPL
Sbjct: 1   MEIIATPSSESIRRTWRRRKYQRLGSSNGPTR-SRSFRLGRLWRMRRGAPRLRFKMASPL 60

Query: 61  KFLTKFHDAYVEMMMRVAKSVGNMYAIGAFGNG---KRIPKPQNQVSLVSCGGEHVDAKL 120
           K L +FHDAYVEMMMRVA  VGNMYAIGAFG G   + IPKP NQVSLVSCGGE VDAKL
Sbjct: 61  KLLARFHDAYVEMMMRVANGVGNMYAIGAFGGGGKRRMIPKPGNQVSLVSCGGEQVDAKL 120

Query: 121 VLEIYNKLAASKNLAAAF 136
           VLEIYNKLAASKNLAAAF
Sbjct: 121 VLEIYNKLAASKNLAAAF 137

BLAST of Spg006847 vs. NCBI nr
Match: KAG6579224.1 (hypothetical protein SDJN03_23672, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 212.6 bits (540), Expect = 2.1e-51
Identity = 110/131 (83.97%), Postives = 116/131 (88.55%), Query Frame = 0

Query: 1   MDIISTPSAQSLKRLWRRRRYQRLGSSNGPTRSSRSFRLGRLWRMRRRASKLRSKMASPL 60
           MDII+TPSA SLKRLWRRRRYQRLGS  G  R SRSFRLGRLWRMRRRA KLR KMASPL
Sbjct: 1   MDIIATPSALSLKRLWRRRRYQRLGSGMGAAR-SRSFRLGRLWRMRRRAPKLRLKMASPL 60

Query: 61  KFLTKFHDAYVEMMMRVAKSVGNMYAIGAFGNGKRIPKPQNQVSLVSCGGEHVDAKLVLE 120
           K L +FHDAYV+MM RVA +VGNMYAIG FGNGKRIPKP+NQ+SLVSCGGE VDAKLVLE
Sbjct: 61  KVLARFHDAYVKMMTRVANNVGNMYAIGGFGNGKRIPKPRNQISLVSCGGEQVDAKLVLE 120

Query: 121 IYNKLAASKNL 132
           IYNKLA SKNL
Sbjct: 121 IYNKLAVSKNL 130

BLAST of Spg006847 vs. NCBI nr
Match: XP_022939174.1 (uncharacterized protein LOC111445168 [Cucurbita moschata])

HSP 1 Score: 208.8 bits (530), Expect = 3.0e-50
Identity = 109/134 (81.34%), Postives = 115/134 (85.82%), Query Frame = 0

Query: 1   MDIISTPSAQSLKRLWRRRRYQRLGSSNGPTRSSRSFRLGRLWRMRRRASKLRSKMASPL 60
           MDII+TPSA SLKRLWRRRRYQRLGS  G  R SRSF LGRLWRMRRRA KLR KMA P 
Sbjct: 1   MDIIATPSALSLKRLWRRRRYQRLGSGTGAAR-SRSFHLGRLWRMRRRAPKLRLKMALPF 60

Query: 61  KFLTKFHDAYVEMMMRVAKSVGNMYAIGAFGNGKRIPKPQNQVSLVSCGGEHVDAKLVLE 120
           K L +FHDAYV+MM RVA  VGNMYAIG FGNGKRIPKP+NQVSLVSCGGE VDAKLVLE
Sbjct: 61  KALARFHDAYVKMMTRVANKVGNMYAIGGFGNGKRIPKPRNQVSLVSCGGEQVDAKLVLE 120

Query: 121 IYNKLAASKNLAAA 135
           +YNKLAASKNL+ A
Sbjct: 121 MYNKLAASKNLSVA 133

BLAST of Spg006847 vs. NCBI nr
Match: XP_022993314.1 (uncharacterized protein LOC111489358 [Cucurbita maxima])

HSP 1 Score: 208.8 bits (530), Expect = 3.0e-50
Identity = 108/134 (80.60%), Postives = 116/134 (86.57%), Query Frame = 0

Query: 1   MDIISTPSAQSLKRLWRRRRYQRLGSSNGPTRSSRSFRLGRLWRMRRRASKLRSKMASPL 60
           MDII+TPSA SLKRLWRRRRYQRLGS  G  R SRSFRLGRLWR+RRRA KLR KM SP 
Sbjct: 1   MDIIATPSALSLKRLWRRRRYQRLGSGTGAAR-SRSFRLGRLWRIRRRAPKLRLKMVSPF 60

Query: 61  KFLTKFHDAYVEMMMRVAKSVGNMYAIGAFGNGKRIPKPQNQVSLVSCGGEHVDAKLVLE 120
           K L +FHDAYV+MMMRVA SVG+MYAIG +GNGKRIPKP NQVSLVSCGGE VD KLVLE
Sbjct: 61  KALARFHDAYVKMMMRVANSVGSMYAIGGYGNGKRIPKPSNQVSLVSCGGEQVDTKLVLE 120

Query: 121 IYNKLAASKNLAAA 135
           +YNKLAASKNL+ A
Sbjct: 121 MYNKLAASKNLSVA 133

BLAST of Spg006847 vs. ExPASy TrEMBL
Match: A0A6J1DHB4 (uncharacterized protein LOC111020054 OS=Momordica charantia OX=3673 GN=LOC111020054 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 5.9e-52
Identity = 112/138 (81.16%), Postives = 122/138 (88.41%), Query Frame = 0

Query: 1   MDIISTPSAQSLKRLWRRRRYQRLGSSNGPTRSSRSFRLGRLWRMRRRASKLRSKMASPL 60
           M+II+TPS++S++R WRRR+YQRLGSSNGPTR SRSFRLGRLWRMRR A +LR KMASPL
Sbjct: 1   MEIIATPSSESIRRTWRRRKYQRLGSSNGPTR-SRSFRLGRLWRMRRGAPRLRFKMASPL 60

Query: 61  KFLTKFHDAYVEMMMRVAKSVGNMYAIGAFGNG---KRIPKPQNQVSLVSCGGEHVDAKL 120
           K L +FHDAYVEMMMRVA  VGNMYAIGAFG G   + IPKP NQVSLVSCGGE VDAKL
Sbjct: 61  KLLARFHDAYVEMMMRVANGVGNMYAIGAFGGGGKRRMIPKPGNQVSLVSCGGEQVDAKL 120

Query: 121 VLEIYNKLAASKNLAAAF 136
           VLEIYNKLAASKNLAAAF
Sbjct: 121 VLEIYNKLAASKNLAAAF 137

BLAST of Spg006847 vs. ExPASy TrEMBL
Match: A0A6J1JZV2 (uncharacterized protein LOC111489358 OS=Cucurbita maxima OX=3661 GN=LOC111489358 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.5e-50
Identity = 108/134 (80.60%), Postives = 116/134 (86.57%), Query Frame = 0

Query: 1   MDIISTPSAQSLKRLWRRRRYQRLGSSNGPTRSSRSFRLGRLWRMRRRASKLRSKMASPL 60
           MDII+TPSA SLKRLWRRRRYQRLGS  G  R SRSFRLGRLWR+RRRA KLR KM SP 
Sbjct: 1   MDIIATPSALSLKRLWRRRRYQRLGSGTGAAR-SRSFRLGRLWRIRRRAPKLRLKMVSPF 60

Query: 61  KFLTKFHDAYVEMMMRVAKSVGNMYAIGAFGNGKRIPKPQNQVSLVSCGGEHVDAKLVLE 120
           K L +FHDAYV+MMMRVA SVG+MYAIG +GNGKRIPKP NQVSLVSCGGE VD KLVLE
Sbjct: 61  KALARFHDAYVKMMMRVANSVGSMYAIGGYGNGKRIPKPSNQVSLVSCGGEQVDTKLVLE 120

Query: 121 IYNKLAASKNLAAA 135
           +YNKLAASKNL+ A
Sbjct: 121 MYNKLAASKNLSVA 133

BLAST of Spg006847 vs. ExPASy TrEMBL
Match: A0A6J1FGC7 (uncharacterized protein LOC111445168 OS=Cucurbita moschata OX=3662 GN=LOC111445168 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.5e-50
Identity = 109/134 (81.34%), Postives = 115/134 (85.82%), Query Frame = 0

Query: 1   MDIISTPSAQSLKRLWRRRRYQRLGSSNGPTRSSRSFRLGRLWRMRRRASKLRSKMASPL 60
           MDII+TPSA SLKRLWRRRRYQRLGS  G  R SRSF LGRLWRMRRRA KLR KMA P 
Sbjct: 1   MDIIATPSALSLKRLWRRRRYQRLGSGTGAAR-SRSFHLGRLWRMRRRAPKLRLKMALPF 60

Query: 61  KFLTKFHDAYVEMMMRVAKSVGNMYAIGAFGNGKRIPKPQNQVSLVSCGGEHVDAKLVLE 120
           K L +FHDAYV+MM RVA  VGNMYAIG FGNGKRIPKP+NQVSLVSCGGE VDAKLVLE
Sbjct: 61  KALARFHDAYVKMMTRVANKVGNMYAIGGFGNGKRIPKPRNQVSLVSCGGEQVDAKLVLE 120

Query: 121 IYNKLAASKNLAAA 135
           +YNKLAASKNL+ A
Sbjct: 121 MYNKLAASKNLSVA 133

BLAST of Spg006847 vs. ExPASy TrEMBL
Match: A0A6J1H4C2 (uncharacterized protein LOC111460357 OS=Cucurbita moschata OX=3662 GN=LOC111460357 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 3.6e-49
Identity = 104/135 (77.04%), Postives = 116/135 (85.93%), Query Frame = 0

Query: 1   MDIISTPSAQSLKRLWRRRRYQRLGSSNGPTRSSRSFRLGRLWRMRRRASKLRSKMASPL 60
           MDII+TPSAQ ++RLWRRR YQ+LGS   PTR SRSFRL RLW MRR+ASK++ K+ASPL
Sbjct: 1   MDIIATPSAQGMRRLWRRRGYQKLGSDTRPTR-SRSFRLRRLWHMRRQASKVQLKIASPL 60

Query: 61  KFLTKFHDAYVEMMMRVAKSVGNMYAIGAFGNGKRIPKPQNQVSLVSCGGEHVDAKLVLE 120
           K L KFHD YVEMMM+VA SVGN+YAIGAFGNGKRIPKP+NQVSL +C GEHVDAK VLE
Sbjct: 61  KLLAKFHDTYVEMMMKVANSVGNIYAIGAFGNGKRIPKPRNQVSLATCDGEHVDAKFVLE 120

Query: 121 IYNKLAASKNLAAAF 136
           IYNKLA SKNLA  F
Sbjct: 121 IYNKLAPSKNLANGF 134

BLAST of Spg006847 vs. ExPASy TrEMBL
Match: A0A5D3BKB9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00020 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 5.5e-42
Identity = 101/137 (73.72%), Postives = 113/137 (82.48%), Query Frame = 0

Query: 1   MDIISTPSAQSLKRLWRRRRYQRL--GSSNGPTRSSRSFRLGRLWRMRRRAS-KLRSKMA 60
           MDII+T SAQ+L+RLWRRR YQRL  GS+  PTRS RSFR+GR+  MRRRAS KLR KM+
Sbjct: 1   MDIIATSSAQNLRRLWRRRTYQRLRSGSNTVPTRSLRSFRVGRMMIMRRRASPKLRLKMS 60

Query: 61  SPLKFLTKFHDAYVEMMMRVAKSVGNMYAIGAFGNGKRIPKPQNQVSLVSCGGEHVDAKL 120
           SPLK + K HDAYVEMMMR+A SVGNMYAIG FGN KRIPKPQNQV L   GGE +DAKL
Sbjct: 61  SPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFGNRKRIPKPQNQVPL---GGEQIDAKL 120

Query: 121 VLEIYNKLAASKNLAAA 135
           VLEIYNKLA+SKN + A
Sbjct: 121 VLEIYNKLASSKNSSNA 134

BLAST of Spg006847 vs. TAIR 10
Match: AT2G47485.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G62650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 48.9 bits (115), Expect = 3.7e-06
Identity = 47/131 (35.88%), Postives = 57/131 (43.51%), Query Frame = 0

Query: 14  RLWRR-RRYQRLGSSNGPTRSSR---------SFRLGRLWRMRRRASKLRSKMASPLKFL 73
           R WRR R YQRL  S     S R           R  R WR++        K ASP K L
Sbjct: 4   RYWRRLRGYQRLDGSAKKASSGRRNVKRVKMDPTRKRRFWRIKIVPKLRILKKASPKKLL 63

Query: 74  TKFHDAYVEMMMRVAKS--VGNMYAIGAFGNGKRIPKPQNQVSLVSCGGEHVDAKLVLEI 132
           T   DAYV MM+R+A S  VG+ Y  G +G G  +              +  D K ++EI
Sbjct: 64  TWLRDAYVNMMLRLANSRVVGSSYGYGEYGYGSGL------------ASKEYDEKKLVEI 122

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7016737.11.2e-5183.97hypothetical protein SDJN02_21847, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022152306.11.2e-5181.16uncharacterized protein LOC111020054 [Momordica charantia][more]
KAG6579224.12.1e-5183.97hypothetical protein SDJN03_23672, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022939174.13.0e-5081.34uncharacterized protein LOC111445168 [Cucurbita moschata][more]
XP_022993314.13.0e-5080.60uncharacterized protein LOC111489358 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DHB45.9e-5281.16uncharacterized protein LOC111020054 OS=Momordica charantia OX=3673 GN=LOC111020... [more]
A0A6J1JZV21.5e-5080.60uncharacterized protein LOC111489358 OS=Cucurbita maxima OX=3661 GN=LOC111489358... [more]
A0A6J1FGC71.5e-5081.34uncharacterized protein LOC111445168 OS=Cucurbita moschata OX=3662 GN=LOC1114451... [more]
A0A6J1H4C23.6e-4977.04uncharacterized protein LOC111460357 OS=Cucurbita moschata OX=3662 GN=LOC1114603... [more]
A0A5D3BKB95.5e-4273.72Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
AT2G47485.13.7e-0635.88unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33702BNAA09G40010D PROTEINcoord: 1..133
NoneNo IPR availablePANTHERPTHR33702:SF2SUBFAMILY NOT NAMEDcoord: 1..133

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg006847.1Spg006847.1mRNA