
Spg006599 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GAAACAACAGATGTTCTAGCTTTTTTATCCTTGATGGGTGAGTTTTGCTTTAGCCCCTATAGGAAGAATGTTCGTCTTTGGAGTCCTAGTCTGTCCAAAGGCTTTTCCTACCACTTCTTTTGGTGCTTGGTTTCTCCTTCCATGTCGAGTGGTTCGATTTTCTCCTTTATGTGGAAGGTGAAAATTCCAAAGAAGGTTAAGTTCTTCATGAGGCAGGTGATGCATGGAAGAGTTAACACCTTGAATGGGATCTTGGGTAAAGTGTCCAATTTGGTAGGGCAACTTTATTGTATTCTTTGTAGGAGAGCGATAGAGGATCTCAATACTTTGTGGAAATGTGACTTTGCCGGGGCAGCTTGGAGTTGTTTCTTTGAGATGTTTGACTTCCACTTTGTTGGTTCTCTGAGTGGTAGAGAGACATTTGAGGAGTTACTTCTCCATTTTCCCTTCATGTGAAAGGGTCCTTTTGTGGCAAGCTGGGGTTTGTGCTATTTTGTGGAATCTATGCCGAGAAAGGAATAATAGATTTTTTAGAGGTTTGGAGAGATCTTCGAGCAATGTTTGGCTTGTTGTTTTTTTTTTAAACAAGAAATAAAACTTTTTATTGATATAATGAAAAGAGGCTATTATTCAAAGGATACAAACCCCACAAGGGAGTAAAAAATTGAAAAAACATAACAACAAACGACATAAAACAGTAAAGAAAATCAAAACAGAACATAACAATACTTAAACTATAAAGGATAGAAAAGCACTCCATTAGACATATATCCTGAACAACTTTAAAAAGGAACGCCCAGATGAAGTTTTAAGCCAAGCTTATTCAAATCGATCAATCCAAGGAAGATGCTCGTTTTGAAGAATCCTTTGATTATGTTCCACCTATAGCTCTGAAAGTATAACCTTTACTGCATTATTCCGAAGCGACCTAGCCTTGGAATTAAAAAATGGTGGACTAAATAAAATCTGAGAAATGTTTCTTCTAAATATGTTGGGAAAAACGCAATGAAGATTGAAATTTGAAAACAACTTGAATCAAAAAAGTCTAGCAAGCAATTGAAGAAAACATAGTTGAGAGCATCTTCATCCTTAAAACAGAGAGGACAAACCAAAGGCAATAAGCAGTTGGAAGGATTCTTCTTTTGTAGAACTTCTGAAGTATTAAGACAACCATTAAGCATTATCCACAATAGGATGTTGATTCTCCTAGGGCTCTTGGACTTCCATAAGGTTGAGTATAAATTTTTGTCTACATGCGAATGAGATAGAGATTTCAGAAAAAAAATACCTGTAGAATCAAGTGACCAATGCCTTGAAGCTTCATCAATAGACATTGATGAAATAGTAGACAAAAGAACTTGAAAATCAACAATCTCTTCATCCTTAAAAAGTCCTCGAAAAGTAATGTTCCAAGAGCTAGTTTGTTGTTCGATAGGGAAACTACGGATGTCCTGTCTCTCCTTTGATAAGGGATGTGCTTTTAGTCTGAATATGAGAGATATCCGTTTGTGGAGTCCTAACCCTTCTCATAGCTTTTCCTATTGTTCGCTCTTCAAATGCCTCGTGGATCCTTCTTTTGCCGAGGTGTCAATATTTTCCTTGTTATGGAAGGTGAAAGTCCCAAAAAGGTACAATTTTTCATTTGGCAGGTTATCCATGGAAGAGTTAATACTCTTGATCGGCTTTCGAGAAAGATGCCCTCTGTGATTGGTCTGTTTTGTTGTATTCTCTGTTGGATGGCAAAGGAAGACCTTGACCACATTTTATGGAGCTGTGATTTTGCTAGATTGGTTGGAATGAGTTCTTTGAGCTATGACTTGCAGTTTGCCAGGCATAAAAGCCTCAGGGAGATGATCGAGGAGTTCTGTTAG GAAACAACAGATGTTCTAGCTTTTTTATCCTTGATGGGTGAGTTTTGCTTTAGCCCCTATAGGAAGAATGTTCGTCTTTGGAGTCCTAGTCTGTCCAAAGGCTTTTCCTACCACTTCTTTTGGTGCTTGGTTTCTCCTTCCATGTCGAGTGGTTCGATTTTCTCCTTTATGTGGAAGGTGAAAATTCCAAAGAAGGTTAAGTTCTTCATGAGGCAGGTGATGCATGGAAGAGTTAACACCTTGAATGGGATCTTGGGTAAAGTGTCCAATTTGGTAGGGCAACTTTATTGTATTCTTTGTAGGAGAGCGATAGAGGATCTCAATACTTTGTGGAAATGTGACTTTGCCGGGGCAGCTTGGAGTTGTTTCTTTGAGATGTTTGACTTCCACTTTGTTGGTGAAAGTCCCAAAAAGGTACAATTTTTCATTTGGCAGGTTATCCATGGAAGAGTTAATACTCTTGATCGGCTTTCGAGAAAGATGCCCTCTGTGATTGGTCTGTTTTGTTGTATTCTCTGTTGGATGGCAAAGGAAGACCTTGACCACATTTTATGGAGCTGTGATTTTGCTAGATTGGTTGGAATGAGTTCTTTGAGCTATGACTTGCAGTTTGCCAGGCATAAAAGCCTCAGGGAGATGATCGAGGAGTTCTGTTAG GAAACAACAGATGTTCTAGCTTTTTTATCCTTGATGGGTGAGTTTTGCTTTAGCCCCTATAGGAAGAATGTTCGTCTTTGGAGTCCTAGTCTGTCCAAAGGCTTTTCCTACCACTTCTTTTGGTGCTTGGTTTCTCCTTCCATGTCGAGTGGTTCGATTTTCTCCTTTATGTGGAAGGTGAAAATTCCAAAGAAGGTTAAGTTCTTCATGAGGCAGGTGATGCATGGAAGAGTTAACACCTTGAATGGGATCTTGGGTAAAGTGTCCAATTTGGTAGGGCAACTTTATTGTATTCTTTGTAGGAGAGCGATAGAGGATCTCAATACTTTGTGGAAATGTGACTTTGCCGGGGCAGCTTGGAGTTGTTTCTTTGAGATGTTTGACTTCCACTTTGTTGGTGAAAGTCCCAAAAAGGTACAATTTTTCATTTGGCAGGTTATCCATGGAAGAGTTAATACTCTTGATCGGCTTTCGAGAAAGATGCCCTCTGTGATTGGTCTGTTTTGTTGTATTCTCTGTTGGATGGCAAAGGAAGACCTTGACCACATTTTATGGAGCTGTGATTTTGCTAGATTGGTTGGAATGAGTTCTTTGAGCTATGACTTGCAGTTTGCCAGGCATAAAAGCCTCAGGGAGATGATCGAGGAGTTCTGTTAG ETTDVLAFLSLMGEFCFSPYRKNVRLWSPSLSKGFSYHFFWCLVSPSMSSGSIFSFMWKVKIPKKVKFFMRQVMHGRVNTLNGILGKVSNLVGQLYCILCRRAIEDLNTLWKCDFAGAAWSCFFEMFDFHFVGESPKKVQFFIWQVIHGRVNTLDRLSRKMPSVIGLFCCILCWMAKEDLDHILWSCDFARLVGMSSLSYDLQFARHKSLREMIEEFC Homology
BLAST of Spg006599 vs. NCBI nr
Match: TYK04295.1 (serine/threonine-protein phosphatase 4 regulatory subunit 3-like isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 89.7 bits (221), Expect = 3.3e-14 Identity = 44/85 (51.76%), Postives = 57/85 (67.06%), Query Frame = 0
BLAST of Spg006599 vs. NCBI nr
Match: KAA0067918.1 (hypothetical protein E6C27_scaffold138G00850 [Cucumis melo var. makuwa]) HSP 1 Score: 89.7 bits (221), Expect = 3.3e-14 Identity = 44/85 (51.76%), Postives = 57/85 (67.06%), Query Frame = 0
BLAST of Spg006599 vs. NCBI nr
Match: TYK07871.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 85.9 bits (211), Expect = 4.7e-13 Identity = 42/78 (53.85%), Postives = 54/78 (69.23%), Query Frame = 0
BLAST of Spg006599 vs. NCBI nr
Match: KAA0040209.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 84.3 bits (207), Expect = 1.4e-12 Identity = 38/64 (59.38%), Postives = 47/64 (73.44%), Query Frame = 0
BLAST of Spg006599 vs. NCBI nr
Match: TYK06215.1 (peroxin Pex14 isoform X3 [Cucumis melo var. makuwa]) HSP 1 Score: 82.4 bits (202), Expect = 5.2e-12 Identity = 50/110 (45.45%), Postives = 62/110 (56.36%), Query Frame = 0
BLAST of Spg006599 vs. ExPASy TrEMBL
Match: A0A5D3BYR2 (Serine/threonine-protein phosphatase 4 regulatory subunit 3-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold527G00230 PE=4 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 1.6e-14 Identity = 44/85 (51.76%), Postives = 57/85 (67.06%), Query Frame = 0
BLAST of Spg006599 vs. ExPASy TrEMBL
Match: A0A5A7VJE4 (zf-RVT domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G00850 PE=4 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 1.6e-14 Identity = 44/85 (51.76%), Postives = 57/85 (67.06%), Query Frame = 0
BLAST of Spg006599 vs. ExPASy TrEMBL
Match: A0A5D3C7M9 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1933G00160 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 2.3e-13 Identity = 42/78 (53.85%), Postives = 54/78 (69.23%), Query Frame = 0
BLAST of Spg006599 vs. ExPASy TrEMBL
Match: A0A5A7TG20 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2228G00040 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 6.7e-13 Identity = 38/64 (59.38%), Postives = 47/64 (73.44%), Query Frame = 0
BLAST of Spg006599 vs. ExPASy TrEMBL
Match: A0A5D3C4A7 (Peroxin Pex14 isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold287G00790 PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 2.5e-12 Identity = 50/110 (45.45%), Postives = 62/110 (56.36%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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