Spg006585 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGATTGAAATAAGAGAAACATACCAAATCAATTAAGTTTAGGATTTGACCTTTCTACCTCAATAAATACTTTGAAACTACGTCGTATCCAAATATGTTAATAAAATAATAATGAAATGAAATTGAGTAAGACTGGGAGGACCCTTTCATATTAAAAAAAAGAAAAAAGAATCTAAAATAAAAAATAAAAAATAAAAAATAAAAAATAGAATGGGTAGAATTTGATGGCAATAGGGCATAAATAGACATAAATCCAAGTGGCGGTTGTGGTTAAAAAAGGGGGGCAAGGTGTGGAGAGGAGAAGAAAGAAGAAAATAGAGAAAGAGGAAAAGCGGAAGGCAGGGCGAAAGAATCGGCAGAGAGGAGAGGGTTGATTAGAATTACATAAATATTGGTTCCCGTGTGTGTTGTGTCTTCGGAAATACTGTCTTCCCTCCTTCCCATTTCCCTCTGCTTCCCCCCTTCCTTCCTCCTCCTCCTGCTCCCATGCCTTTTCTTCCTCACCTTTTCACCTAAATGCTCTTCTTCTTCGCGGGTATTTTCTTATTCTTACTTTGTTTTGTTTGCATTATTATATTTATTTAAGTTGGAAATAGTAGTATCTGATGAGGTGTGTTTTTGGATGGAATTAGACAGTGTGAATTCTGTGGTGGGGTTCTGTTCTGTTCTGTTGTTGAATTGTGGTGAACATTTTTATAGAAATGGATGAAAATGGTGGGATCAAGTTGACTGGAATCCGCCAGTTTGTGAGGCTGAAAGAGACTCTCCAACACTGGCAAGCCGTGACAGCGAACCCGAAATCGAAAGCAGCAGCCCATGAAAACCCAAATAATACAAATCATGGGATCCTTTCACCGGCAATCAACAAAAGGCTGACGAATGTGTTGTGTTGTGATTCGGACGAGGAGAGCTGCCAGAGCCCTGAGCATCCACCCGATGTCCCCAAAGGCTACTTGGCTGTCTATGTTGGCCCGGAGCTTCGCAGGTTTATCATTCCCACCAGCTATCTTAGCCATTCGGTGTTCAAGGTGTTGCTTGAAAAGGCAGAGGAGGAGTTTGGATTTGATCATACCGGCGGGCTCACTTTCCCATGCGAGATCGAGACCTTCAAATACCTTCTCAAGTGCATGGAGAGCCAGCAGAAGGATCATCCTGATGACCACACCCCAGGTACCTACCTACCTACCTACCTACCTTATTCACTCATATCAATTATCAATTGCATCATCACCCCATTGCCATTCACAACAAATTTCTTGCTTGCAGCTGAGAGTTCTTTAACCATGGAAGGATAAGAAAATGGTTGTGATCCACAGCAGAGGGGGCTTTTTTTGCAAACCCAGATGGATGTCTCTGTGCCAGAATGTCAGATATATGTTGTCAATTTGATGTGTTGTGGTTTTGGTTTGAGAGTCAGAAAAAAAGTAGACATGTGTTTAATTAGTTAGAAAAGTGGAGGATGATGTGTGTGTCAGGCAGATTGATCTACTTTTTTTTTTTTTTTTTTTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTCTTTCTTCTGTTTTTGGGAATACCCTCTCAGGGGATGTGAACTTCCATTTGCTTCCCTGTATTTGAATGTGAAGCACATGATTGTTTGACCACACTGTATGAATTTCTTTCTTTGTTTTATTTTTTAAATCCACCATGAAATTCAGGCCCAAATGTGAATGTGGATTTTGCAAATATTCTCTCATCATCATCCATGTGGGGTTGAGTTATGTGTCTTCCTCCTCTTCCTTTCAACCCAAATCTCAAGGAAACACATTTCTGCCAACTCATCATATATACTATGCTTTTAATGTCAAACACAAACA ATGGATGAAAATGGTGGGATCAAGTTGACTGGAATCCGCCAGTTTGTGAGGCTGAAAGAGACTCTCCAACACTGGCAAGCCGTGACAGCGAACCCGAAATCGAAAGCAGCAGCCCATGAAAACCCAAATAATACAAATCATGGGATCCTTTCACCGGCAATCAACAAAAGGCTGACGAATGTGTTGTGTTGTGATTCGGACGAGGAGAGCTGCCAGAGCCCTGAGCATCCACCCGATGTCCCCAAAGGCTACTTGGCTGTCTATGTTGGCCCGGAGCTTCGCAGGTTTATCATTCCCACCAGCTATCTTAGCCATTCGGTGTTCAAGGTGTTGCTTGAAAAGGCAGAGGAGGAGTTTGGATTTGATCATACCGGCGGGCTCACTTTCCCATGCGAGATCGAGACCTTCAAATACCTTCTCAAGTGCATGGAGAGCCAGCAGAAGGATCATCCTGATGACCACACCCCAGCTGAGAGTTCTTTAACCATGGAAGGATAA ATGGATGAAAATGGTGGGATCAAGTTGACTGGAATCCGCCAGTTTGTGAGGCTGAAAGAGACTCTCCAACACTGGCAAGCCGTGACAGCGAACCCGAAATCGAAAGCAGCAGCCCATGAAAACCCAAATAATACAAATCATGGGATCCTTTCACCGGCAATCAACAAAAGGCTGACGAATGTGTTGTGTTGTGATTCGGACGAGGAGAGCTGCCAGAGCCCTGAGCATCCACCCGATGTCCCCAAAGGCTACTTGGCTGTCTATGTTGGCCCGGAGCTTCGCAGGTTTATCATTCCCACCAGCTATCTTAGCCATTCGGTGTTCAAGGTGTTGCTTGAAAAGGCAGAGGAGGAGTTTGGATTTGATCATACCGGCGGGCTCACTTTCCCATGCGAGATCGAGACCTTCAAATACCTTCTCAAGTGCATGGAGAGCCAGCAGAAGGATCATCCTGATGACCACACCCCAGCTGAGAGTTCTTTAACCATGGAAGGATAA MDENGGIKLTGIRQFVRLKETLQHWQAVTANPKSKAAAHENPNNTNHGILSPAINKRLTNVLCCDSDEESCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEEEFGFDHTGGLTFPCEIETFKYLLKCMESQQKDHPDDHTPAESSLTMEG Homology
BLAST of Spg006585 vs. NCBI nr
Match: XP_022971373.1 (auxin-responsive protein SAUR71-like isoform X2 [Cucurbita maxima] >XP_022971374.1 auxin-responsive protein SAUR71-like isoform X2 [Cucurbita maxima] >XP_022971375.1 auxin-responsive protein SAUR71-like isoform X2 [Cucurbita maxima] >XP_022971376.1 auxin-responsive protein SAUR71-like isoform X2 [Cucurbita maxima] >XP_022971377.1 auxin-responsive protein SAUR71-like isoform X2 [Cucurbita maxima] >XP_022971378.1 auxin-responsive protein SAUR71-like isoform X2 [Cucurbita maxima] >XP_022971379.1 auxin-responsive protein SAUR71-like isoform X2 [Cucurbita maxima] >XP_022971380.1 auxin-responsive protein SAUR71-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 320.5 bits (820), Expect = 8.7e-84 Identity = 154/168 (91.67%), Postives = 157/168 (93.45%), Query Frame = 0
BLAST of Spg006585 vs. NCBI nr
Match: XP_022971372.1 (uncharacterized protein LOC111470119 isoform X1 [Cucurbita maxima]) HSP 1 Score: 320.5 bits (820), Expect = 8.7e-84 Identity = 154/168 (91.67%), Postives = 157/168 (93.45%), Query Frame = 0
BLAST of Spg006585 vs. NCBI nr
Match: KAG6596152.1 (Indole-3-acetic acid-induced protein ARG7, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 319.7 bits (818), Expect = 1.5e-83 Identity = 154/168 (91.67%), Postives = 157/168 (93.45%), Query Frame = 0
BLAST of Spg006585 vs. NCBI nr
Match: XP_023539667.1 (uncharacterized protein LOC111800282 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 319.3 bits (817), Expect = 1.9e-83 Identity = 154/168 (91.67%), Postives = 157/168 (93.45%), Query Frame = 0
BLAST of Spg006585 vs. NCBI nr
Match: XP_022940030.1 (uncharacterized protein LOC111445786 isoform X1 [Cucurbita moschata]) HSP 1 Score: 319.3 bits (817), Expect = 1.9e-83 Identity = 154/168 (91.67%), Postives = 157/168 (93.45%), Query Frame = 0
BLAST of Spg006585 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 9.5e-17 Identity = 37/69 (53.62%), Postives = 52/69 (75.36%), Query Frame = 0
BLAST of Spg006585 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 2.8e-16 Identity = 38/66 (57.58%), Postives = 49/66 (74.24%), Query Frame = 0
BLAST of Spg006585 vs. ExPASy Swiss-Prot
Match: Q9SL45 (Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR10 PE=2 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 3.6e-16 Identity = 41/85 (48.24%), Postives = 55/85 (64.71%), Query Frame = 0
BLAST of Spg006585 vs. ExPASy Swiss-Prot
Match: P33082 (Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 1.0e-15 Identity = 37/66 (56.06%), Postives = 49/66 (74.24%), Query Frame = 0
BLAST of Spg006585 vs. ExPASy Swiss-Prot
Match: P33079 (Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 6.8e-15 Identity = 38/59 (64.41%), Postives = 45/59 (76.27%), Query Frame = 0
BLAST of Spg006585 vs. ExPASy TrEMBL
Match: A0A6J1I8D8 (auxin-responsive protein SAUR71-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470119 PE=3 SV=1) HSP 1 Score: 320.5 bits (820), Expect = 4.2e-84 Identity = 154/168 (91.67%), Postives = 157/168 (93.45%), Query Frame = 0
BLAST of Spg006585 vs. ExPASy TrEMBL
Match: A0A6J1I1S2 (uncharacterized protein LOC111470119 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470119 PE=3 SV=1) HSP 1 Score: 320.5 bits (820), Expect = 4.2e-84 Identity = 154/168 (91.67%), Postives = 157/168 (93.45%), Query Frame = 0
BLAST of Spg006585 vs. ExPASy TrEMBL
Match: A0A6J1FIL4 (auxin-responsive protein SAUR71-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445786 PE=3 SV=1) HSP 1 Score: 319.3 bits (817), Expect = 9.3e-84 Identity = 154/168 (91.67%), Postives = 157/168 (93.45%), Query Frame = 0
BLAST of Spg006585 vs. ExPASy TrEMBL
Match: A0A6J1FPE8 (uncharacterized protein LOC111445786 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445786 PE=3 SV=1) HSP 1 Score: 319.3 bits (817), Expect = 9.3e-84 Identity = 154/168 (91.67%), Postives = 157/168 (93.45%), Query Frame = 0
BLAST of Spg006585 vs. ExPASy TrEMBL
Match: A0A5A7UGQ0 (Auxin-responsive protein SAUR71 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G001580 PE=3 SV=1) HSP 1 Score: 311.6 bits (797), Expect = 1.9e-81 Identity = 152/167 (91.02%), Postives = 156/167 (93.41%), Query Frame = 0
BLAST of Spg006585 vs. TAIR 10
Match: AT5G20810.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 218.0 bits (554), Expect = 5.6e-57 Identity = 112/165 (67.88%), Postives = 124/165 (75.15%), Query Frame = 0
BLAST of Spg006585 vs. TAIR 10
Match: AT5G20810.2 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 215.7 bits (548), Expect = 2.8e-56 Identity = 110/156 (70.51%), Postives = 121/156 (77.56%), Query Frame = 0
BLAST of Spg006585 vs. TAIR 10
Match: AT3G43120.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 214.5 bits (545), Expect = 6.2e-56 Identity = 109/165 (66.06%), Postives = 124/165 (75.15%), Query Frame = 0
BLAST of Spg006585 vs. TAIR 10
Match: AT2G24400.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 97.8 bits (242), Expect = 8.5e-21 Identity = 62/145 (42.76%), Postives = 81/145 (55.86%), Query Frame = 0
BLAST of Spg006585 vs. TAIR 10
Match: AT4G31320.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 92.8 bits (229), Expect = 2.7e-19 Identity = 59/149 (39.60%), Postives = 84/149 (56.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|