Spg006399 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGAAAACAAGAGGCCGTAAAGAAAGGGATATAGAGGAAGAGCTACCCACTACGCCTGAAGTTCCGAAGAAGAAAGTCAAAAAGAAAAGGACTCCGACAGAAAAAGAAGCCAAGAGATTGAGGAAACAGCAGGAAGCTGAGGTTTCCGAAATTCTGGAGAAAACTGTAGAAGAAATTGCAACGGAGGTGATAACGGAGGAAGAACCGAAAGAACCAGAAAAAGAAAAGTTCCTGAGAAGACGACAGAGGTGGAAGAAAATGTCCAACAAACAGATCATGGTAACACGGAACCAGCAGTACAGGAGGTTCAGGAAGCAATAGTTCAGATTCCATTGTGTCGTCGCCGTCGCAAACAGAAAGAGAGGAAGCTGCAAAGAAGGTAGAGGAAGAAGCCCTGACGAAGCAAAGAGAAGACAAGGGCAAAAGAGTTGCTGAAGCTCCGGCAGAGGCAGAGGAGGCTGCAATGAGGAACTGAGACTGCCGTATGATCGCTTCATCAACAATCTTGCCAGAGCAAAATATAGGGAGATGCTGAAAAGAGATTTCTTGTTTGAAAGAGGCTTCGGTGAGGACTTACCACACTCTTTGAGGGCTGGACTTGCAAACCACGGATGGAGTCAATTCTGCGCAAAACTAGAATCGGTAAATTCAAATATTGTCCGCGAATTCTACGTGAACATAGATGATCAGGAGGGATTCCAAGCCATGGTCTGAGGGGTAGTTGTCGATTGGAGCCCAGGAGCGGTAAATTCTCTCTTCAACCTCCAGGATTTTCCACATGCTGGATTTAATGAGATGGTGGTGGCACCATCCAATGATCAATTGAACGCGGCCGTCCGAGAGGTTGGTATTGAAGGGGCCCAATGGAGATTGTCGAAGACGGAGAAACGCACATTCCAAGCAGCCTATTTGAAGAGTGAGGCTAACACATGGTTGGGCTTCATTAAGCTGCGTTTGCTCCCGACAACTCATGATTCAACAGTATCCCGGGATAGAGTGCTACTGGTGTTTGCCATTCTGCGATCCTTGAGTATAGATGTGGGTAAGATTATTTCAAGTGAAATTTAG ATGGCGAAAACAAGAGGCCGTAAAGAAAGGGATATAGAGGAAGAGCTACCCACTACGCCTGAAGTTCCGAAGAAGAAAGTCAAAAAGAAAAGGACTCCGACAGAAAAAGAAGCCAAGAGATTGAGGAAACAGCAGGAAGCTGAGGTTTCCGAAATTCTGGAGAAAACTGTAGAAGAAATTGCAACGGAGGTGATAACGGAGGAAGAACCGAAAGAACCAGAAAAAGAAAAGTTCCTGAGAAGACGACAGAGGTGGAAGAAAATGTCCAACAAACAGATCATGGTAACACGGAACCAGCAGTACAGGAGAGGCAGAGGAGGCTGCAATGAGGAACTGAGACTGCCGTATGATCGCTTCATCAACAATCTTGCCAGAGCAAAATATAGGGAGATGCTGAAAAGAGATTTCTTGTTTGAAAGAGGCTTCGGTGAGGACTTACCACACTCTTTGAGGGCTGGACTTGCAAACCACGGATGGAGTCAATTCTGCGCAAAACTAGAATCGGATTTTCCACATGCTGGATTTAATGAGATGGTGGTGGCACCATCCAATGATCAATTGAACGCGGCCGTCCGAGAGGTTGGTATTGAAGGGGCCCAATGGAGATTGTCGAAGACGGAGAAACGCACATTCCAAGCAGCCTATTTGAAGAGTGAGGCTAACACATGGTTGGGCTTCATTAAGCTGCGTTTGCTCCCGACAACTCATGATTCAACAGTATCCCGGGATAGAGTGCTACTGGTGTTTGCCATTCTGCGATCCTTGAGTATAGATGTGGGTAAGATTATTTCAAGTGAAATTTAG ATGGCGAAAACAAGAGGCCGTAAAGAAAGGGATATAGAGGAAGAGCTACCCACTACGCCTGAAGTTCCGAAGAAGAAAGTCAAAAAGAAAAGGACTCCGACAGAAAAAGAAGCCAAGAGATTGAGGAAACAGCAGGAAGCTGAGGTTTCCGAAATTCTGGAGAAAACTGTAGAAGAAATTGCAACGGAGGTGATAACGGAGGAAGAACCGAAAGAACCAGAAAAAGAAAAGTTCCTGAGAAGACGACAGAGGTGGAAGAAAATGTCCAACAAACAGATCATGGTAACACGGAACCAGCAGTACAGGAGAGGCAGAGGAGGCTGCAATGAGGAACTGAGACTGCCGTATGATCGCTTCATCAACAATCTTGCCAGAGCAAAATATAGGGAGATGCTGAAAAGAGATTTCTTGTTTGAAAGAGGCTTCGGTGAGGACTTACCACACTCTTTGAGGGCTGGACTTGCAAACCACGGATGGAGTCAATTCTGCGCAAAACTAGAATCGGATTTTCCACATGCTGGATTTAATGAGATGGTGGTGGCACCATCCAATGATCAATTGAACGCGGCCGTCCGAGAGGTTGGTATTGAAGGGGCCCAATGGAGATTGTCGAAGACGGAGAAACGCACATTCCAAGCAGCCTATTTGAAGAGTGAGGCTAACACATGGTTGGGCTTCATTAAGCTGCGTTTGCTCCCGACAACTCATGATTCAACAGTATCCCGGGATAGAGTGCTACTGGTGTTTGCCATTCTGCGATCCTTGAGTATAGATGTGGGTAAGATTATTTCAAGTGAAATTTAG MAKTRGRKERDIEEELPTTPEVPKKKVKKKRTPTEKEAKRLRKQQEAEVSEILEKTVEEIATEVITEEEPKEPEKEKFLRRRQRWKKMSNKQIMVTRNQQYRRGRGGCNEELRLPYDRFINNLARAKYREMLKRDFLFERGFGEDLPHSLRAGLANHGWSQFCAKLESDFPHAGFNEMVVAPSNDQLNAAVREVGIEGAQWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIISSEI Homology
BLAST of Spg006399 vs. NCBI nr
Match: EOY13933.1 (Uncharacterized protein TCM_032752 [Theobroma cacao]) HSP 1 Score: 76.3 bits (186), Expect = 4.6e-10 Identity = 37/80 (46.25%), Postives = 53/80 (66.25%), Query Frame = 0
BLAST of Spg006399 vs. NCBI nr
Match: XP_022154847.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia]) HSP 1 Score: 72.8 bits (177), Expect = 5.1e-09 Identity = 41/155 (26.45%), Postives = 76/155 (49.03%), Query Frame = 0
BLAST of Spg006399 vs. NCBI nr
Match: PON62892.1 (hypothetical protein PanWU01x14_135680 [Parasponia andersonii]) HSP 1 Score: 72.8 bits (177), Expect = 5.1e-09 Identity = 39/92 (42.39%), Postives = 55/92 (59.78%), Query Frame = 0
BLAST of Spg006399 vs. NCBI nr
Match: EXC33712.1 (hypothetical protein L484_008956 [Morus notabilis]) HSP 1 Score: 71.6 bits (174), Expect = 1.1e-08 Identity = 47/155 (30.32%), Postives = 80/155 (51.61%), Query Frame = 0
BLAST of Spg006399 vs. NCBI nr
Match: EOY08849.1 (Uncharacterized protein TCM_024087 [Theobroma cacao]) HSP 1 Score: 71.2 bits (173), Expect = 1.5e-08 Identity = 42/114 (36.84%), Postives = 61/114 (53.51%), Query Frame = 0
BLAST of Spg006399 vs. ExPASy TrEMBL
Match: A0A061FAJ6 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_032752 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 2.2e-10 Identity = 37/80 (46.25%), Postives = 53/80 (66.25%), Query Frame = 0
BLAST of Spg006399 vs. ExPASy TrEMBL
Match: A0A2P5CPE8 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_135680 PE=4 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 2.5e-09 Identity = 39/92 (42.39%), Postives = 55/92 (59.78%), Query Frame = 0
BLAST of Spg006399 vs. ExPASy TrEMBL
Match: A0A6J1DMT3 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 OS=Momordica charantia OX=3673 GN=LOC111022007 PE=4 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 2.5e-09 Identity = 41/155 (26.45%), Postives = 76/155 (49.03%), Query Frame = 0
BLAST of Spg006399 vs. ExPASy TrEMBL
Match: W9SAV1 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_008956 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 5.5e-09 Identity = 47/155 (30.32%), Postives = 80/155 (51.61%), Query Frame = 0
BLAST of Spg006399 vs. ExPASy TrEMBL
Match: A0A061F2U9 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_024087 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 7.2e-09 Identity = 42/114 (36.84%), Postives = 61/114 (53.51%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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