Spg006351 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg006351
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	glutamic acid-rich protein-like
Location	scaffold4: 5747046 .. 5748144 (-)
RNA-Seq Expression	Spg006351
Synteny	Spg006351

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACCGTTGAGGTATTTCAATTAATATTCATTTTACTTTCTCTCTAGGATTTGTGTATCCATGGCCTTTCTATATTCGTCGATTTTAAGGCGTATAGGAGACGGAGTGACGGGTGCAATTACTTATCTTATCGAGATTCAATTCCTTGTTTTCAAATTCAATAAATTTTGTTCAATGGGTTTGTTCATGAGAATATTATTTGGATTGTGTGATCTATAAAATGAAAATTTTAAAAATAGCATTTTTCAATGTTATTTTAGAGTCTAAACGTGCTACCAAACGTTTTTTTTTTCTTTTTCTTGATAACATGTGAGGTGGGAGATTTGAACCACATACTTCTTGGTCATCCGTTAGTTTTATGCCAGTTGAACTATACTCATGTTGGCGGCTACCAAACACATATTAGAAAAGAGTGAAAGCAATATCAGTTATGTTTTTTTTTTTTACTGAAGTTAGCTTGTTTTCTTGCATCGCCAACTATTCATTAAAAAATTAAATTTATTGTGACCTATGAATTTAAACTTTCGGTTGATTGGTAATTTAACATAGTATCACGTATGAGATCATAAAATACGATATTCAAATAAATGACATTTTCTCTCCAATTAATATTGATTGTTACTTTCAAAATTTCTTCCTTATGTCATATATTCTTATATGGTAATTTTCTTACAGATTGTATCTCCGAACTCCGCTCTCCTGGAAGAAACAACAGTTCTTAAAGAGACAGTCGCAAAAGAGGAGGTTGAGGAACCAACAACGCTAGTTGTTGCATCAGAAGAGAAGGAGGAAGAAGAGAGTGTTAAAGTCGAAGTTGTTGCCGAACCATCAAATTCAGAAGTTGTTGCTCTGAATGACAAAGTTGAAATCGCGGACGAGGAAAAGGAGGAGGAGGAGGAAGAAGAAGAGGAGGTCGTGATCCTAACAGACGATGATGATGTGGCGACTGAAGAGGAATATGAATCAGTTGCAGAGGTAGCCAAAGAAGAAAATGACAGCCCCGACGAGTCATCGGCACCGGAAGCCGAAGCTCCGATAGCAAAGGAGGCAAAGGAAGAAGAAGAGGAGGAAGCGCCGGCGGAGAAGCAAGAGTAA

mRNA sequence

ATGGCCACCGTTGAGATTGTATCTCCGAACTCCGCTCTCCTGGAAGAAACAACAGTTCTTAAAGAGACAGTCGCAAAAGAGGAGGTTGAGGAACCAACAACGCTAGTTGTTGCATCAGAAGAGAAGGAGGAAGAAGAGAGTGTTAAAGTCGAAGTTGTTGCCGAACCATCAAATTCAGAAGTTGTTGCTCTGAATGACAAAGTTGAAATCGCGGACGAGGAAAAGGAGGAGGAGGAGGAAGAAGAAGAGGAGGTCGTGATCCTAACAGACGATGATGATGTGGCGACTGAAGAGGAATATGAATCAGTTGCAGAGGTAGCCAAAGAAGAAAATGACAGCCCCGACGAGTCATCGGCACCGGAAGCCGAAGCTCCGATAGCAAAGGAGGCAAAGGAAGAAGAAGAGGAGGAAGCGCCGGCGGAGAAGCAAGAGTAA

Coding sequence (CDS)

ATGGCCACCGTTGAGATTGTATCTCCGAACTCCGCTCTCCTGGAAGAAACAACAGTTCTTAAAGAGACAGTCGCAAAAGAGGAGGTTGAGGAACCAACAACGCTAGTTGTTGCATCAGAAGAGAAGGAGGAAGAAGAGAGTGTTAAAGTCGAAGTTGTTGCCGAACCATCAAATTCAGAAGTTGTTGCTCTGAATGACAAAGTTGAAATCGCGGACGAGGAAAAGGAGGAGGAGGAGGAAGAAGAAGAGGAGGTCGTGATCCTAACAGACGATGATGATGTGGCGACTGAAGAGGAATATGAATCAGTTGCAGAGGTAGCCAAAGAAGAAAATGACAGCCCCGACGAGTCATCGGCACCGGAAGCCGAAGCTCCGATAGCAAAGGAGGCAAAGGAAGAAGAAGAGGAGGAAGCGCCGGCGGAGAAGCAAGAGTAA

Protein sequence

MATVEIVSPNSALLEETTVLKETVAKEEVEEPTTLVVASEEKEEEESVKVEVVAEPSNSEVVALNDKVEIADEEKEEEEEEEEEVVILTDDDDVATEEEYESVAEVAKEENDSPDESSAPEAEAPIAKEAKEEEEEEAPAEKQE

Homology

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BLAST of Spg006351 vs. NCBI nr
Match: KAG6572249.1 (hypothetical protein SDJN03_28977, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 124.8 bits (312), Expect = 6.1e-25
Identity = 99/145 (68.28%), Postives = 114/145 (78.62%), Query Frame = 0


Query: 1   MATVEIVSPNSALLEETTVLKETVAKEEVEEPTTLVVASEEK-EEEESVKVEVVAEPSNS 60
           MATVE +SPN+ALLEET VLKET AKE VEEP    V  EEK E+EESV+VE VAEP +S
Sbjct: 1   MATVETISPNAALLEETNVLKETAAKEGVEEPAPPAVTPEEKAEKEESVEVETVAEPPHS 60

Query: 61  EVVALNDKVEIADEEKEEEEEEEEEVVILTDDDDVATEEEYESVAEVAKEENDSPDESSA 120
           E   LN+KVE A EE+EE EEEEEEVVILTD+     EEE E+VAEV KEE+DSPDESSA
Sbjct: 61  EATVLNEKVE-ATEEEEEVEEEEEEVVILTDES--KAEEEPEAVAEVTKEESDSPDESSA 120

Query: 121 PEAEAPIAKEAKEEEEEEAPAEKQE 145
           PEA+AP  +E  E+E++EAPAEK E
Sbjct: 121 PEADAPATEE--EDEKKEAPAEKTE 140

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BLAST of Spg006351 vs. NCBI nr
Match: XP_022968885.1 (glutamic acid-rich protein-like [Cucurbita maxima])

HSP 1 Score: 123.6 bits (309), Expect = 1.4e-24
Identity = 98/140 (70.00%), Postives = 114/140 (81.43%), Query Frame = 0


Query: 7   VSPNSALLEETTVLKETVAKEEVEEPTTLVVASEEK-EEEESVKVEVVAEPSNSEVVALN 66
           +SPN+ALLEET VLKET AKEEVEEP    V  EEK E+EESV+VE VAEP +S+   LN
Sbjct: 11  ISPNAALLEETNVLKETAAKEEVEEPAQPAVTPEEKAEKEESVEVETVAEPPHSKAGVLN 70

Query: 67  DKVEIADEEKEEEEEEEEEVVILTDDDDVATEEEYESVAEVAKEENDSPDESSAPEAEAP 126
           +KVE A EE+EE EEEEEEVVILTD+ +   EEE E+VAEVAKEE+DSP+ESSAPEA+ P
Sbjct: 71  EKVE-ATEEEEEVEEEEEEVVILTDESE--AEEEPEAVAEVAKEESDSPNESSAPEADTP 130

Query: 127 IAKEAKEEEE-EEAPAEKQE 145
            AKEAKEE+E +EAPAEK E
Sbjct: 131 AAKEAKEEDEKKEAPAEKTE 147

[Close]

BLAST of Spg006351 vs. NCBI nr
Match: XP_023511645.1 (glutamic acid-rich protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 122.9 bits (307), Expect = 2.3e-24
Identity = 96/138 (69.57%), Postives = 112/138 (81.16%), Query Frame = 0


Query: 7   VSPNSALLEETTVLKETVAKEEVEEPTTLVVASEEK-EEEESVKVEVVAEPSNSEVVALN 66
           +SPN+ALLEET VLKET AKEEVEEP    V  EEK E+EESV+VE VAEP +SE    N
Sbjct: 5   ISPNAALLEETNVLKETAAKEEVEEPAPPAVTPEEKAEKEESVEVETVAEPPHSEAAVSN 64

Query: 67  DKVEIADEEKEEEEEEEEEVVILTDDDDVATEEEYESVAEVAKEENDSPDESSAPEAEAP 126
           +KVE   EE+EE EEEEEEV+ILTD+ +   EEE E+VAEVAKEE+DSPDESSAPEA+AP
Sbjct: 65  EKVE-PTEEEEEVEEEEEEVMILTDESE--AEEEPEAVAEVAKEESDSPDESSAPEADAP 124

Query: 127 IAKEAKEEEE-EEAPAEK 143
            A+EAKEE+E +EAPAEK
Sbjct: 125 AAEEAKEEDEKKEAPAEK 139

[Close]

BLAST of Spg006351 vs. NCBI nr
Match: KAG7011879.1 (hypothetical protein SDJN02_26786, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 115.9 bits (289), Expect = 2.8e-22
Identity = 94/140 (67.14%), Postives = 109/140 (77.86%), Query Frame = 0


Query: 7   VSPNSALLEETTVLKETVAKEEVEEPTTLVVASEEK-EEEESVKVEVVAEPSNSEVVALN 66
           +SPN+ALLEET VLKET A+E VEEP    V  E K E+EESV+VE VAEP +SE   LN
Sbjct: 7   ISPNAALLEETNVLKETAAREGVEEPAPPAVTPEGKAEKEESVEVETVAEPPHSEATVLN 66

Query: 67  DKVEIADEEKEEEEEEEEEVVILTDDDDVATEEEYESVAEVAKEENDSPDESSAPEAEAP 126
           +KVE A EE+EE EEEEEEVVILTD+     EEE E+VAEV KEE+DSPDES APEA+AP
Sbjct: 67  EKVE-ATEEEEEVEEEEEEVVILTDES--KAEEEPEAVAEVTKEESDSPDESLAPEADAP 126

Query: 127 IAKEAKEEEE-EEAPAEKQE 145
             +EAKEE+E +EAPAEK E
Sbjct: 127 ATEEAKEEDEKKEAPAEKTE 143

[Close]

BLAST of Spg006351 vs. NCBI nr
Match: KAA0059152.1 (glutamic acid-rich protein-like [Cucumis melo var. makuwa] >TYK02536.1 glutamic acid-rich protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 102.4 bits (254), Expect = 3.2e-18
Identity = 89/151 (58.94%), Postives = 115/151 (76.16%), Query Frame = 0


Query: 1   MATVEIVSPNSALLEETTVLKETVAKEEVEEPTTLVVASEEK--EEEESVKVEVVAEPSN 60
           MATVE VSPN+ LLE+TT++KET AKEEVEE ++  + S+EK  E+EESVKVEVV E S+
Sbjct: 1   MATVETVSPNAVLLEDTTIVKETNAKEEVEEQSSPNITSKEKVEEKEESVKVEVVDERSS 60

Query: 61  ---SEVVALNDKVEIADEEKEEEEEEEEEVVILTDDDDVATEEEYESVAEVAKEENDSPD 120
              SE V  N+KVE   +++EEEEEEE+EVVILTDDD+V    E +  AEVAKEEND PD
Sbjct: 61  DDYSEAVVSNEKVEATADQEEEEEEEEDEVVILTDDDEVEEYLESKEAAEVAKEENDKPD 120

Query: 121 ESS-APEAEAPIAKEAKE-EEEEEAPAEKQE 145
           E S   EA+A +++EA+E +E++EA  EK+E
Sbjct: 121 EPSVVAEAKALVSEEAEEKDEKKEAREEKKE 151

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BLAST of Spg006351 vs. ExPASy TrEMBL
Match: A0A6J1HYF7 (glutamic acid-rich protein-like OS=Cucurbita maxima OX=3661 GN=LOC111468066 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 6.6e-25
Identity = 98/140 (70.00%), Postives = 114/140 (81.43%), Query Frame = 0


Query: 7   VSPNSALLEETTVLKETVAKEEVEEPTTLVVASEEK-EEEESVKVEVVAEPSNSEVVALN 66
           +SPN+ALLEET VLKET AKEEVEEP    V  EEK E+EESV+VE VAEP +S+   LN
Sbjct: 11  ISPNAALLEETNVLKETAAKEEVEEPAQPAVTPEEKAEKEESVEVETVAEPPHSKAGVLN 70

Query: 67  DKVEIADEEKEEEEEEEEEVVILTDDDDVATEEEYESVAEVAKEENDSPDESSAPEAEAP 126
           +KVE A EE+EE EEEEEEVVILTD+ +   EEE E+VAEVAKEE+DSP+ESSAPEA+ P
Sbjct: 71  EKVE-ATEEEEEVEEEEEEVVILTDESE--AEEEPEAVAEVAKEESDSPNESSAPEADTP 130

Query: 127 IAKEAKEEEE-EEAPAEKQE 145
            AKEAKEE+E +EAPAEK E
Sbjct: 131 AAKEAKEEDEKKEAPAEKTE 147

[Close]

BLAST of Spg006351 vs. ExPASy TrEMBL
Match: A0A5A7UTC3 (Glutamic acid-rich protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold201G00150 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 1.6e-18
Identity = 89/151 (58.94%), Postives = 115/151 (76.16%), Query Frame = 0


Query: 1   MATVEIVSPNSALLEETTVLKETVAKEEVEEPTTLVVASEEK--EEEESVKVEVVAEPSN 60
           MATVE VSPN+ LLE+TT++KET AKEEVEE ++  + S+EK  E+EESVKVEVV E S+
Sbjct: 1   MATVETVSPNAVLLEDTTIVKETNAKEEVEEQSSPNITSKEKVEEKEESVKVEVVDERSS 60

Query: 61  ---SEVVALNDKVEIADEEKEEEEEEEEEVVILTDDDDVATEEEYESVAEVAKEENDSPD 120
              SE V  N+KVE   +++EEEEEEE+EVVILTDDD+V    E +  AEVAKEEND PD
Sbjct: 61  DDYSEAVVSNEKVEATADQEEEEEEEEDEVVILTDDDEVEEYLESKEAAEVAKEENDKPD 120

Query: 121 ESS-APEAEAPIAKEAKE-EEEEEAPAEKQE 145
           E S   EA+A +++EA+E +E++EA  EK+E
Sbjct: 121 EPSVVAEAKALVSEEAEEKDEKKEAREEKKE 151

[Close]

BLAST of Spg006351 vs. ExPASy TrEMBL
Match: A0A1S3C185 (glutamic acid-rich protein-like OS=Cucumis melo OX=3656 GN=LOC103495666 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 1.0e-17
Identity = 88/151 (58.28%), Postives = 114/151 (75.50%), Query Frame = 0


Query: 1   MATVEIVSPNSALLEETTVLKETVAKEEVEEPTTLVVASEEK--EEEESVKVEVVAEPSN 60
           MATVE VSPN+ LLE+TT++KET AKEEVEE ++  + S+EK  E+EESVKVEVV E S+
Sbjct: 1   MATVETVSPNAVLLEDTTIVKETNAKEEVEEQSSPNITSKEKVEEKEESVKVEVVDERSS 60

Query: 61  ---SEVVALNDKVEIADEEKEEEEEEEEEVVILTDDDDVATEEEYESVAEVAKEENDSPD 120
              SE V  N+KVE   +++EEEEEEE+EVVILTDDD+V    E +  A VAKEEND PD
Sbjct: 61  DDYSEAVVSNEKVEATADQEEEEEEEEDEVVILTDDDEVEEYLESKEAAGVAKEENDKPD 120

Query: 121 ESS-APEAEAPIAKEAKE-EEEEEAPAEKQE 145
           E S   EA+A +++EA+E +E++EA  EK+E
Sbjct: 121 EPSVVAEAKALVSEEAEEKDEKKEAREEKKE 151

[Close]

BLAST of Spg006351 vs. ExPASy TrEMBL
Match: A0A0A0K197 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G037490 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.7e-17
Identity = 92/152 (60.53%), Postives = 112/152 (73.68%), Query Frame = 0


Query: 1   MATVEIVSPNSALLEETTVLKETVAKEEVEEPTTLVVASEE--KEEEESVKV-EVVAEPS 60
           MATVEIVSPN+ LLE+TT +KETV KEEVEE ++    S+E  +E+EESVKV EVV E S
Sbjct: 1   MATVEIVSPNATLLEDTTTVKETVTKEEVEEQSSPDTTSKENVEEKEESVKVDEVVDEKS 60

Query: 61  --NSEVVALNDKVEIADEEKEEEEEEEEEVVILTDDDDVATEEEYESVAEVAKEENDSPD 120
             +SE V  N+KVE       EEEEEE+EVVILTDDD+V   E  E  AEVAKEEND PD
Sbjct: 61  SDDSEAVVPNEKVEAT----AEEEEEEDEVVILTDDDEVEELEYNEEAAEVAKEENDKPD 120

Query: 121 ESS-APEAEAPIAKEAKEEEE--EEAPAEKQE 145
           ESS  PEA+A +++EA+EE+E  +EA  EK+E
Sbjct: 121 ESSVVPEAKAVVSEEAEEEDEKKDEAAEEKKE 148

[Close]

BLAST of Spg006351 vs. ExPASy TrEMBL
Match: A0A6J1JFZ3 (cyclin-dependent kinase 11A-like OS=Cucurbita maxima OX=3661 GN=LOC111486534 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.9e-08
Identity = 69/143 (48.25%), Postives = 86/143 (60.14%), Query Frame = 0


Query: 1   MATVEIVSPNSALLEETTVLKETVAKEEVEEPTTLVVASEEKEEEESVKVEVVAEPSNSE 60
           MA VE V P +AL EET V+ E VA  E           E+ EEEESV+VEV A      
Sbjct: 1   MAAVEAVPPTTALPEETAVVNEEVAAPE-----------EKAEEEESVEVEVAA------ 60

Query: 61  VVALNDKVEIADEEKEEEEEEEEEVVILTDDDDVATEEEYESVAEVAKEENDSPDESSAP 120
                         KEEEEEEEE+VVIL+D++    E E  S+AEVAKEEN   DESS P
Sbjct: 61  --------------KEEEEEEEEKVVILSDEEAAEEELESLSIAEVAKEENVGSDESSVP 112

Query: 121 EAEAPIAKEAKEEEEEEAPAEKQ 144
           EAEAP+ +EAKEE+E++  +E++
Sbjct: 121 EAEAPVEEEAKEEDEKKEVSEEK 112

The following BLAST results are available for this feature:

BLAST of Spg006351 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6572249.1	6.1e-25	68.28	hypothetical protein SDJN03_28977, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022968885.1	1.4e-24	70.00	glutamic acid-rich protein-like [Cucurbita maxima]	[more]
XP_023511645.1	2.3e-24	69.57	glutamic acid-rich protein-like [Cucurbita pepo subsp. pepo]	[more]
KAG7011879.1	2.8e-22	67.14	hypothetical protein SDJN02_26786, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAA0059152.1	3.2e-18	58.94	glutamic acid-rich protein-like [Cucumis melo var. makuwa] >TYK02536.1 glutamic ...	[more]

BLAST of Spg006351 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg006351 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HYF7	6.6e-25	70.00	glutamic acid-rich protein-like OS=Cucurbita maxima OX=3661 GN=LOC111468066 PE=4...	[more]
A0A5A7UTC3	1.6e-18	58.94	Glutamic acid-rich protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3C185	1.0e-17	58.28	glutamic acid-rich protein-like OS=Cucumis melo OX=3656 GN=LOC103495666 PE=4 SV=...	[more]
A0A0A0K197	1.7e-17	60.53	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G037490 PE=4 SV=1	[more]
A0A6J1JFZ3	1.9e-08	48.25	cyclin-dependent kinase 11A-like OS=Cucurbita maxima OX=3661 GN=LOC111486534 PE=...	[more]

BLAST of Spg006351 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 128..144
None	No IPR available	COILS	Coil	Coil	coord: 61..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..51

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg006351.1	Spg006351.1	mRNA