Spg006214 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg006214
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Transposon TX1 uncharacterized 149 kDa protein
Location	scaffold4: 3113893 .. 3117997 (+)
RNA-Seq Expression	Spg006214
Synteny	Spg006214

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACCCAAATCCCCAAAATCCTCGTCCACAAGCCACCAACCAGCCTCCAGTAAACCCCAAAATAGTCAGCAACCTATCCTTCATTCCCAGTCCTCCCAATACCGTGTTAACAGGCCCACTCACAAAAGCCCAAACCCGCCAATCCCCCACCAACAAAGCTCTCCCCAAAGGCCCAATCCACCCCATGAAAACCTGCAAGATAGGAAAAAGCCCATTATGATCAACAATAAAAAGACCTATCTTCTCACTGGTACTGTACACTCCACCAACACCGAACTCCCCATATCCGATTCGGAAGGCTCTTCCCCTTGCACGACAGCCATGGTTGACTCCCCATCTCAGAACCACCATAAAGCCATTATCCAAGCAGCTTCCCCACCAACTATCCGCAACCTCTTCGAGCCACAAGTTGACGAACGACCATATCTCGAAGAACCTATCCCCCTGCGTAGGGAAGAACCCACTTATCCGCACAACCAGAACCACAAAACTGCTCTCACCGAAGTGGAAATAGAAGAAGAAGAGTCCAACGAAGATTGGAAAAATGATCCTGACGAAACTGACCCGGTGGTCTACTTGCCCTACCTTTTCCCTTGGTTAGCTGAGCATGGAATGTGTATCATGCCAATGCCGGGGCGACACAAGACCTCAAGTGCCACAAAGAAGAAGGCTAAATGGGTGAGGGAGATAAAAAATTTGTACACCACAGTAAATTACGAAAAGGCTCCAGTGGACAACCTTATTGATTGGTCGCTCAACATCTCATGATTTTTATCTCATGGAACGTTCGCGGTATGGGTTCTTGGAAGAAACGAGCCCTCATCAAAGACTTTATCACAACTCAGAATCCAGCTTTGGTGATTCTTCAAGAAACAAAGCTGGCGACCATTGATAGAAAGATCATCAAATCTATATGGAGTTCTAGGAGCATTGCTTGGGCATCTCTTGATGCAACAGGGACCTCGGGTGGCATCGTTATCTTGTGGAACGAATCCTCCTTCTCTGTGATGGAAGTGGTAGAAGGTATGTTTTCTCTATCCATACACCTCTCTCTCGCTGATGGTTTCTCCTTCTGGATTACAGGGGTCTATGGCCCAAACACAGCTCGTGACAGAAAACTTTTCTGGAGAGAGCTGGTTGATTTACAGGCTCTTTGCTTGCCGCATTGGATTATAGGTGGGGATTTCAATGTGATTAGATGGACTTGGGAAAAATCCACCCACACTGCCCCTACCAGAGCCATGAGAAGATTTAATCGATTCATCGATGAAGCTGAATTACAGGACATCCCTCTATCCAACGGGAAATTTTCATGGTCTAGTTTTAGACCCAATCCTACCATGACCCTTATCGACCGGTTCCTTATATCTGAGCATATATCCTCTAAATTTGAGTATGTCTCAGCCCGTAGGCTTGATCGAATCACCTCAGACCACTACCCCATCAGCCTCTCATTGGGTAAAAATCGTTGGGGCCCATCTCCCTTTAGATTCCACAATGTTTGGCTCACCCACCAATCCTTTTCTGCCACAGTCGATCAATGGTGGAAAGCATCTCCTTCTTTCGGGTGGCCAGGGCATGGGTTCATCCAAAAACTAAAAGGCCTTAAGAAAGAGCTCAAGCTATGGAACCAGACAGTGTTTGGCAATCAAAAGGATCAGCGTGATAGACTGAGCAGAGAACTCTCTGTCATTGACTCGAAAGAAGACAGAGGAGAGATATCCGAACAAGACATATCCAGAAGAACAAGCATCAAGGCAGAATTGTTCTCTTTAGCAGTTAATGAGGAAATCATGTGGCGCCAAAGATGTAAGTCAAAGTGGTTTATGGAAGGGGATGTTAACTCAGCTTTTTTTCACCGCTTGGTTGCTGCAAATCGCCGAAAGTGCTCCATTCATGAGATTTTATCAGTCATGGGTAATAGTCTCACTAGTGATGATGATATCGAAAAGGAGTTTATATCCTTTTATAAAAAGCTTTACACCAAATCCAATAGCAGATCGCCCCTCCCGACCATAGAGGAATGGAACCCCCTGACTAATGTACAGAAAAAAGCTTTAGAGTTCCCCTTCACAGAAGCAGAGATCTTCAAGGCTGTGCAGGAATTAGGCACAAACAAGACTCCGGGACCCGATGGTTTCACATCAGAATTCTTTAAAAAATCTTGGAACATCCTCAAAGAAGATATAAAGGGGGTGTTCAATGATTTTTTCGAGAATGGTATCATAAACGCAAGTTTAAACGAGACTTACATATGCCTAATCCCAAAGATAGTAGGAGCCAAAACAGTGGGAGAATATAGACCCATCAGCTTGACCACCTGTCTTTATAAAGTCATTGCGAGAGTCCTATCGGACCGTTTGAAAAAAGTCCTCCCGGATATTATCACAGACTATCAATCTGCCTTTGTGGGGGATAGGCAAATTATGGATGCATCTCTGATTGCAAACGAGGTGATAGACGAATGGAATAGAAAGAAGAGGAAAGGGGTGGTCATAAAGTTAGACATCGAGAAGGCATTCGATACGGTTGATTGGGATTTTCTTGATGACATTTTAATTGCAAAAGGTTTCGGACACAGATGGAGAAGATGGATTAGGGGATGTCTTTCCTCAGCAAACTTCTCTATAATCATCAATGGCAAACCAAGGGGCAAAATTTTGGCAACGAGAGGCCTTAGACAAGGTGATCCGCTTTCCCTCTTCCTTTTTATTATTGTGGCAGATGTTCTAAGCAGAATGCTAGTTGAGGCCGAAAAAGCAGGCTCCATAGAAGGGTTCAGGGTTGGTAATGATCCACAACCGTTAACTATCCACAACCGTTAACTATCACTCATCTCCAATTTGCCGATGACACAATTTTGTTTTCCTCACCCAAGTCATCCCTCATAGACAACCTTTTTGCCATCATTCGCACCTTTGAAAGTGCTTCAGGGATGAAGATAAATTGTCAAAAATCCGAGTTTTTGGGCCTTGGTTTGGCCTCGAATGAGGTTTTCCCCTTGGCATCTAGACACGATTGTAAAACGGCAGTTGGCCGACTACTTATTTAGGCCTCCCTCTCAACGGCAATCCTAAAAAGGAAAGCTTCTGGACTCCGATCATTGAAAAGATTCAGAAGAGGTTGTATAGTTGGGGAACATCCAATATTTCAAAAGGTGGCCGACACACCCTTATTCAAGCTACTCTAGCAAACCTCCCCATATATTACCTATCCCTTTTTTTGGCCCAATAAAGGTCACAAAGAGCATAGAAAAGTTGTACCGTGCTTTTTTATGGCGTGGCGGGATTGATAAGAAAGGCAGTCACCTCCTAAAATGGACCAAAATTCAAATCCCTATAGAAGAAGGAGGTTTTGGAATATACGACATACACAAAAAGAATGTTTCCCTCTTGGCAAAGTGGTCCTGGCGTTTTTATAATGAACCAAAAGCCTTATGGAGAAGATGCATTGCCAAAAAGTATGGAGTTGCTTTAAATCCTTTCAAACTCGGAGATCACTAGATTAAATCCTCTAATGGGCCATGGAGATCTATTCATAAATTGCAGCAACTTGTCTATAATTCCATGGAGATCAGAGTTGGAAAAGGTGATAAAACAATGTTCTGGGATGACCTATGGATCGGAAATGAACCTCTAAAAGTCACATTCCCCTCTCTCTACAGGGTATCCCAAAAAAGAGAAGCCCTCATTATTGACCTATGGAACTCTACGGAAGGGGCTTGGAACCTACACTTAAGGAGAAATCTCACAGAAGAAGAAATTTTTGAATGGACATCTCTCTCCCACATTCTCTCCTGTTTCTCTCTAAAAGAGGTAGAGGACTCATGGTTTTGGAAGCTTGAAAAGAATGGTCTATTCTCTACAGGATCACTTACCAAAAAACTGGCCTCCTCTACTCAGTCCAACATAAATGATTTCTATGTTCAGCTATGGAAAGGCCCCATGCCGAAAAAGGTAAAATTCTTTCTATGGGAGCTCAGCCACGAATGTATAAATACAGCCGATCTCATACAAAGGAGAAATCCGGGGACAACCCTTTCCCTAAATTGCTGCTGCCTATGTTACAAAGATTCAGAGTCTCAAGTCCATCTCTTCAGTAA

mRNA sequence

ATGGAACCCAAATCCCCAAAATCCTCGTCCACAAGCCACCAACCAGCCTCCAGTAAACCCCAAAATAGTCAGCAACCTATCCTTCATTCCCAGTCCTCCCAATACCGTGTTAACAGGCCCACTCACAAAAGCCCAAACCCGCCAATCCCCCACCAACAAAGCTCTCCCCAAAGGCCCAATCCACCCCATGAAAACCTGCAAGATAGGAAAAAGCCCATTATGATCAACAATAAAAAGACCTATCTTCTCACTGGTACTGTACACTCCACCAACACCGAACTCCCCATATCCGATTCGGAAGGCTCTTCCCCTTGCACGACAGCCATGGTTGACTCCCCATCTCAGAACCACCATAAAGCCATTATCCAAGCAGCTTCCCCACCAACTATCCGCAACCTCTTCGAGCCACAAGTTGACGAACGACCATATCTCGAAGAACCTATCCCCCTGCGTAGGGAAGAACCCACTTATCCGCACAACCAGAACCACAAAACTGCTCTCACCGAAGTGGAAATAGAAGAAGAAGAGTCCAACGAAGATTGGAAAAATGATCCTGACGAAACTGACCCGGTGGTCTACTTGCCCTACCTTTTCCCTTGGTTAGCTGAGCATGGAATGTGTATCATGCCAATGCCGGGGCGACACAAGACCTCAAGTGCCACAAAGAAGAAGGCTAAATGGTATGTCTCAGCCCGTAGGCTTGATCGAATCACCTCAGACCACTACCCCATCAGCCTCTCATTGGGTAAAAATCGTTGGGGCCCATCTCCCTTTAGATTCCACAATGTTTGGCTCACCCACCAATCCTTTTCTGCCACAGTCGATCAATGGTGGAAAGCATCTCCTTCTTTCGGGTGGCCAGGGCATGGGTTCATCCAAAAACTAAAAGGCCTTAAGAAAGAGCTCAAGCTATGGAACCAGACAGTGTTTGGCAATCAAAAGGATCAGCGTGATAGACTGAGCAGAGAACTCTCTGTCATTGACTCGAAAGAAGACAGAGGAGAGATATCCGAACAAGACATATCCAGAAGAACAAGCATCAAGGCAGAATTGTTCTCTTTAGCAGTTAATGAGGAAATCATGTGGCGCCAAAGATGTAAGTCAAAGTGGTTTATGGAAGGGGATGTTAACTCAGCTTTTTTTCACCGCTTGGTTGCTGCAAATCGCCGAAAGTGCTCCATTCATGAGATTTTATCAGTCATGGCTATGGAAAGGCCCCATGCCGAAAAAGGTAAAATTCTTTCTATGGGAGCTCAGCCACGAATGTATAAATACAGCCGATCTCATACAAAGGAGAAATCCGGGGACAACCCTTTCCCTAAATTGCTGCTGCCTATGTTACAAAGATTCAGAGTCTCAAGTCCATCTCTTCAGTAA

Coding sequence (CDS)

ATGGAACCCAAATCCCCAAAATCCTCGTCCACAAGCCACCAACCAGCCTCCAGTAAACCCCAAAATAGTCAGCAACCTATCCTTCATTCCCAGTCCTCCCAATACCGTGTTAACAGGCCCACTCACAAAAGCCCAAACCCGCCAATCCCCCACCAACAAAGCTCTCCCCAAAGGCCCAATCCACCCCATGAAAACCTGCAAGATAGGAAAAAGCCCATTATGATCAACAATAAAAAGACCTATCTTCTCACTGGTACTGTACACTCCACCAACACCGAACTCCCCATATCCGATTCGGAAGGCTCTTCCCCTTGCACGACAGCCATGGTTGACTCCCCATCTCAGAACCACCATAAAGCCATTATCCAAGCAGCTTCCCCACCAACTATCCGCAACCTCTTCGAGCCACAAGTTGACGAACGACCATATCTCGAAGAACCTATCCCCCTGCGTAGGGAAGAACCCACTTATCCGCACAACCAGAACCACAAAACTGCTCTCACCGAAGTGGAAATAGAAGAAGAAGAGTCCAACGAAGATTGGAAAAATGATCCTGACGAAACTGACCCGGTGGTCTACTTGCCCTACCTTTTCCCTTGGTTAGCTGAGCATGGAATGTGTATCATGCCAATGCCGGGGCGACACAAGACCTCAAGTGCCACAAAGAAGAAGGCTAAATGGTATGTCTCAGCCCGTAGGCTTGATCGAATCACCTCAGACCACTACCCCATCAGCCTCTCATTGGGTAAAAATCGTTGGGGCCCATCTCCCTTTAGATTCCACAATGTTTGGCTCACCCACCAATCCTTTTCTGCCACAGTCGATCAATGGTGGAAAGCATCTCCTTCTTTCGGGTGGCCAGGGCATGGGTTCATCCAAAAACTAAAAGGCCTTAAGAAAGAGCTCAAGCTATGGAACCAGACAGTGTTTGGCAATCAAAAGGATCAGCGTGATAGACTGAGCAGAGAACTCTCTGTCATTGACTCGAAAGAAGACAGAGGAGAGATATCCGAACAAGACATATCCAGAAGAACAAGCATCAAGGCAGAATTGTTCTCTTTAGCAGTTAATGAGGAAATCATGTGGCGCCAAAGATGTAAGTCAAAGTGGTTTATGGAAGGGGATGTTAACTCAGCTTTTTTTCACCGCTTGGTTGCTGCAAATCGCCGAAAGTGCTCCATTCATGAGATTTTATCAGTCATGGCTATGGAAAGGCCCCATGCCGAAAAAGGTAAAATTCTTTCTATGGGAGCTCAGCCACGAATGTATAAATACAGCCGATCTCATACAAAGGAGAAATCCGGGGACAACCCTTTCCCTAAATTGCTGCTGCCTATGTTACAAAGATTCAGAGTCTCAAGTCCATCTCTTCAGTAA

Protein sequence

MEPKSPKSSSTSHQPASSKPQNSQQPILHSQSSQYRVNRPTHKSPNPPIPHQQSSPQRPNPPHENLQDRKKPIMINNKKTYLLTGTVHSTNTELPISDSEGSSPCTTAMVDSPSQNHHKAIIQAASPPTIRNLFEPQVDERPYLEEPIPLRREEPTYPHNQNHKTALTEVEIEEEESNEDWKNDPDETDPVVYLPYLFPWLAEHGMCIMPMPGRHKTSSATKKKAKWYVSARRLDRITSDHYPISLSLGKNRWGPSPFRFHNVWLTHQSFSATVDQWWKASPSFGWPGHGFIQKLKGLKKELKLWNQTVFGNQKDQRDRLSRELSVIDSKEDRGEISEQDISRRTSIKAELFSLAVNEEIMWRQRCKSKWFMEGDVNSAFFHRLVAANRRKCSIHEILSVMAMERPHAEKGKILSMGAQPRMYKYSRSHTKEKSGDNPFPKLLLPMLQRFRVSSPSLQ

Homology

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BLAST of Spg006214 vs. NCBI nr
Match: XP_022158956.1 (uncharacterized protein LOC111025405 [Momordica charantia])

HSP 1 Score: 164.5 bits (415), Expect = 2.2e-36
Identity = 75/169 (44.38%), Postives = 101/169 (59.76%), Query Frame = 0


Query: 231 ARRLDRITSDHYPISLSLGKNRWGPSPFRFHNVWLTHQSFSATVDQWWKASPSFGWPGHG 290
           A+R+ R TSDH+PI L  G+N WG +PFRF N+WL+H++F   ++ WW   P  GWPGHG
Sbjct: 211 AKRMTRTTSDHFPILLDFGQNNWGLTPFRFENMWLSHKTFKPFLETWWGNKPLHGWPGHG 270

Query: 291 FIQKLKGLKKELKLWNQTVFGNQKDQRDRLSRELSVIDSKEDRGEISEQDISRRTSIKAE 350
            + KLK LK  +KLW    F     Q++ L+  ++ +D  E    ++      R   K +
Sbjct: 271 LMMKLKSLKYAIKLWITEHFRCIHSQKEDLTNLMNSLDDLEGSQPVTPDQSRARIQAKED 330

Query: 351 LFSLAVNEEIMWRQRCKSKWFMEGDVNSAFFHRLVAANRRKCSIHEILS 400
           L S+   EE  WRQRCK KW  EGD N+ FFHR +A  RR+  I EILS
Sbjct: 331 LLSVVAKEEAFWRQRCKQKWLCEGDENTKFFHRFLANKRRRSIITEILS 379

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BLAST of Spg006214 vs. NCBI nr
Match: RVW35206.1 (hypothetical protein CK203_101901 [Vitis vinifera])

HSP 1 Score: 151.0 bits (380), Expect = 2.5e-32
Identity = 69/171 (40.35%), Postives = 100/171 (58.48%), Query Frame = 0


Query: 227 WYVSARRLDRITSDHYPISLSLGKNRWGPSPFRFHNVWLTHQSFSATVDQWWKASPSFGW 286
           W +    L R TSDH+PI L     +WGP+PFRF N+WL H SF     +WW+     GW
Sbjct: 182 WLLRVGVLPRWTSDHWPIVLETNPFKWGPTPFRFENMWLQHPSFKENFGRWWREFQGNGW 241

Query: 287 PGHGFIQKLKGLKKELKLWNQTVFGNQKDQRDRLSRELSVIDSKEDRGEISEQDISRRTS 346
            GH F++KL+ +K +LK+WN+  FG    +++ +  +L   DS E  G +S + +++R  
Sbjct: 242 EGHKFMRKLQFVKAKLKVWNKASFGELSKRKEDILSDLVNFDSLEQEGGLSHELLAQRAL 301

Query: 347 IKAELFSLAVNEEIMWRQRCKSKWFMEGDVNSAFFHRLVAANRRKCSIHEI 398
            K EL  L + EEI WRQ+ + KW  EGD NS FFH++    R +  I E+
Sbjct: 302 KKGELEELILREEIHWRQKARVKWVKEGDCNSKFFHKVANGRRNRKFIKEL 352

[Close]

BLAST of Spg006214 vs. NCBI nr
Match: RVW91038.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera])

HSP 1 Score: 149.4 bits (376), Expect = 7.3e-32
Identity = 74/183 (40.44%), Postives = 105/183 (57.38%), Query Frame = 0


Query: 234 LDRITSDHYPISLSLGKNRWGPSPFRFHNVWLTHQSFSATVDQWWKASPSFGWPGHGFIQ 293
           L R TSDH+PI L     +WGP+PFRF N+WL H SF     +WW      GW GH F++
Sbjct: 319 LPRWTSDHWPIVLETNPFKWGPTPFRFENMWLQHSSFKENFGRWWSEFQGNGWEGHKFMR 378

Query: 294 KLKGLKKELKLWNQTVFGNQKDQRDRLSRELSVIDSKEDRGEISEQDISRRTSIKAELFS 353
           KL+ +K +LK WN+T FG    ++  +   L+  DS E  G +S++ + +R   K EL  
Sbjct: 379 KLQFVKAKLKEWNKTSFGELSKKKKDILAVLANFDSLEQEGGLSQELLVQRAFSKGELEE 438

Query: 354 LAVNEEIMWRQRCKSKWFMEGDVNSAFFHRLVAANRRKCSIHEI--LSVMAMERPHAEKG 413
           L + EEI WRQ+ + KW  EGD NS FFH++    R +  I E+   S + +  P + K 
Sbjct: 439 LILREEIHWRQKARVKWVKEGDCNSKFFHKVANGRRNRKFIKELENESGLMLNNPESIKE 498

Query: 414 KIL 415
           +IL
Sbjct: 499 EIL 501

[Close]

BLAST of Spg006214 vs. NCBI nr
Match: RVW90400.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera])

HSP 1 Score: 149.4 bits (376), Expect = 7.3e-32
Identity = 74/183 (40.44%), Postives = 104/183 (56.83%), Query Frame = 0


Query: 234 LDRITSDHYPISLSLGKNRWGPSPFRFHNVWLTHQSFSATVDQWWKASPSFGWPGHGFIQ 293
           L R TSDH+PI L     +WGP+PFRF N+WL H SF     +WW      GW GH F++
Sbjct: 230 LPRWTSDHWPIVLETNPFKWGPTPFRFENMWLQHSSFKENFGRWWSEFQGNGWEGHKFMR 289

Query: 294 KLKGLKKELKLWNQTVFGNQKDQRDRLSRELSVIDSKEDRGEISEQDISRRTSIKAELFS 353
           KL+ +K +LK WN+T FG    ++  +   L+  DS E  G +S + + +R   K EL  
Sbjct: 290 KLQFVKAKLKEWNKTSFGELSKKKKDILAVLANFDSLEQEGGLSHERLVQRAFSKGELEE 349

Query: 354 LAVNEEIMWRQRCKSKWFMEGDVNSAFFHRLVAANRRKCSIHEI--LSVMAMERPHAEKG 413
           L + EEI WRQ+ + KW  EGD NS FFH++    R +  I E+   S + +  P + K 
Sbjct: 350 LILREEIHWRQKARVKWVKEGDCNSKFFHKVANGRRNRKFIKELENESGLMLNNPESIKE 409

Query: 414 KIL 415
           +IL
Sbjct: 410 EIL 412

[Close]

BLAST of Spg006214 vs. NCBI nr
Match: CAN69126.1 (hypothetical protein VITISV_008195 [Vitis vinifera])

HSP 1 Score: 149.4 bits (376), Expect = 7.3e-32
Identity = 74/183 (40.44%), Postives = 105/183 (57.38%), Query Frame = 0


Query: 234  LDRITSDHYPISLSLGKNRWGPSPFRFHNVWLTHQSFSATVDQWWKASPSFGWPGHGFIQ 293
            L R TSDH+PI L     +WGP+PFRF N+WL H SF     +WW      GW GH F++
Sbjct: 973  LPRWTSDHWPIVLETNPFKWGPTPFRFENMWLQHSSFKENFGRWWSEFQGNGWEGHKFMR 1032

Query: 294  KLKGLKKELKLWNQTVFGNQKDQRDRLSRELSVIDSKEDRGEISEQDISRRTSIKAELFS 353
            KL+ +K +LK WN+T FG    ++  +   L+  DS E  G +S++ + +R   K EL  
Sbjct: 1033 KLQFVKAKLKEWNKTSFGELSKKKKDILAVLANFDSLEQEGGLSQELLVQRAFSKGELEE 1092

Query: 354  LAVNEEIMWRQRCKSKWFMEGDVNSAFFHRLVAANRRKCSIHEI--LSVMAMERPHAEKG 413
            L + EEI WRQ+ + KW  EGD NS FFH++    R +  I E+   S + +  P + K 
Sbjct: 1093 LILREEIHWRQKARVKWVKEGDCNSKFFHKVANGRRNRKFIKELENESGLMLNNPESIKE 1152

Query: 414  KIL 415
            +IL
Sbjct: 1153 EIL 1155

[Close]

BLAST of Spg006214 vs. ExPASy TrEMBL
Match: A0A6J1E2G6 (uncharacterized protein LOC111025405 OS=Momordica charantia OX=3673 GN=LOC111025405 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.1e-36
Identity = 75/169 (44.38%), Postives = 101/169 (59.76%), Query Frame = 0


Query: 231 ARRLDRITSDHYPISLSLGKNRWGPSPFRFHNVWLTHQSFSATVDQWWKASPSFGWPGHG 290
           A+R+ R TSDH+PI L  G+N WG +PFRF N+WL+H++F   ++ WW   P  GWPGHG
Sbjct: 211 AKRMTRTTSDHFPILLDFGQNNWGLTPFRFENMWLSHKTFKPFLETWWGNKPLHGWPGHG 270

Query: 291 FIQKLKGLKKELKLWNQTVFGNQKDQRDRLSRELSVIDSKEDRGEISEQDISRRTSIKAE 350
            + KLK LK  +KLW    F     Q++ L+  ++ +D  E    ++      R   K +
Sbjct: 271 LMMKLKSLKYAIKLWITEHFRCIHSQKEDLTNLMNSLDDLEGSQPVTPDQSRARIQAKED 330

Query: 351 LFSLAVNEEIMWRQRCKSKWFMEGDVNSAFFHRLVAANRRKCSIHEILS 400
           L S+   EE  WRQRCK KW  EGD N+ FFHR +A  RR+  I EILS
Sbjct: 331 LLSVVAKEEAFWRQRCKQKWLCEGDENTKFFHRFLANKRRRSIITEILS 379

[Close]

BLAST of Spg006214 vs. ExPASy TrEMBL
Match: A0A438DIM3 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_101901 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.2e-32
Identity = 69/171 (40.35%), Postives = 100/171 (58.48%), Query Frame = 0


Query: 227 WYVSARRLDRITSDHYPISLSLGKNRWGPSPFRFHNVWLTHQSFSATVDQWWKASPSFGW 286
           W +    L R TSDH+PI L     +WGP+PFRF N+WL H SF     +WW+     GW
Sbjct: 182 WLLRVGVLPRWTSDHWPIVLETNPFKWGPTPFRFENMWLQHPSFKENFGRWWREFQGNGW 241

Query: 287 PGHGFIQKLKGLKKELKLWNQTVFGNQKDQRDRLSRELSVIDSKEDRGEISEQDISRRTS 346
            GH F++KL+ +K +LK+WN+  FG    +++ +  +L   DS E  G +S + +++R  
Sbjct: 242 EGHKFMRKLQFVKAKLKVWNKASFGELSKRKEDILSDLVNFDSLEQEGGLSHELLAQRAL 301

Query: 347 IKAELFSLAVNEEIMWRQRCKSKWFMEGDVNSAFFHRLVAANRRKCSIHEI 398
            K EL  L + EEI WRQ+ + KW  EGD NS FFH++    R +  I E+
Sbjct: 302 KKGELEELILREEIHWRQKARVKWVKEGDCNSKFFHKVANGRRNRKFIKEL 352

[Close]

BLAST of Spg006214 vs. ExPASy TrEMBL
Match: A0A438I2T6 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_595 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 3.6e-32
Identity = 74/183 (40.44%), Postives = 105/183 (57.38%), Query Frame = 0


Query: 234 LDRITSDHYPISLSLGKNRWGPSPFRFHNVWLTHQSFSATVDQWWKASPSFGWPGHGFIQ 293
           L R TSDH+PI L     +WGP+PFRF N+WL H SF     +WW      GW GH F++
Sbjct: 319 LPRWTSDHWPIVLETNPFKWGPTPFRFENMWLQHSSFKENFGRWWSEFQGNGWEGHKFMR 378

Query: 294 KLKGLKKELKLWNQTVFGNQKDQRDRLSRELSVIDSKEDRGEISEQDISRRTSIKAELFS 353
           KL+ +K +LK WN+T FG    ++  +   L+  DS E  G +S++ + +R   K EL  
Sbjct: 379 KLQFVKAKLKEWNKTSFGELSKKKKDILAVLANFDSLEQEGGLSQELLVQRAFSKGELEE 438

Query: 354 LAVNEEIMWRQRCKSKWFMEGDVNSAFFHRLVAANRRKCSIHEI--LSVMAMERPHAEKG 413
           L + EEI WRQ+ + KW  EGD NS FFH++    R +  I E+   S + +  P + K 
Sbjct: 439 LILREEIHWRQKARVKWVKEGDCNSKFFHKVANGRRNRKFIKELENESGLMLNNPESIKE 498

Query: 414 KIL 415
           +IL
Sbjct: 499 EIL 501

[Close]

BLAST of Spg006214 vs. ExPASy TrEMBL
Match: A0A438FW30 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_762 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 3.6e-32
Identity = 70/176 (39.77%), Postives = 103/176 (58.52%), Query Frame = 0


Query: 234 LDRITSDHYPISLSLGKNRWGPSPFRFHNVWLTHQSFSATVDQWWKASPSFGWPGHGFIQ 293
           L R TSDH+PI +      WGP+PFRF N+WL H +F      WW      GW GH F++
Sbjct: 513 LIRRTSDHWPIVMDTNPFMWGPTPFRFENMWLQHTNFKENFRDWWSGFQGIGWEGHKFMR 572

Query: 294 KLKGLKKELKLWNQTVFGNQKDQRDRLSRELSVIDSKEDRGEISEQDISRRTSIKAELFS 353
           +L+ +K +LK WN++ FG  K+++  +  +L+  D+ E  G ++   IS+R S K EL  
Sbjct: 573 RLQYVKAKLKEWNKSSFGELKEKKKSILNDLANFDAIEQEGGLNPDLISQRVSRKGELEE 632

Query: 354 LAVNEEIMWRQRCKSKWFMEGDVNSAFFHRLVAANRRKCSIHEILSVMAMERPHAE 410
           L + EEI WRQ+ K KW  EGD NS F+H++  A R +  I E+ +   +   +AE
Sbjct: 633 LILREEIHWRQKAKVKWVKEGDCNSKFYHKVANARRNRKYIKELENERGLVLKNAE 688

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BLAST of Spg006214 vs. ExPASy TrEMBL
Match: A5AK27 (Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_008195 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 3.6e-32
Identity = 74/183 (40.44%), Postives = 105/183 (57.38%), Query Frame = 0


Query: 234  LDRITSDHYPISLSLGKNRWGPSPFRFHNVWLTHQSFSATVDQWWKASPSFGWPGHGFIQ 293
            L R TSDH+PI L     +WGP+PFRF N+WL H SF     +WW      GW GH F++
Sbjct: 973  LPRWTSDHWPIVLETNPFKWGPTPFRFENMWLQHSSFKENFGRWWSEFQGNGWEGHKFMR 1032

Query: 294  KLKGLKKELKLWNQTVFGNQKDQRDRLSRELSVIDSKEDRGEISEQDISRRTSIKAELFS 353
            KL+ +K +LK WN+T FG    ++  +   L+  DS E  G +S++ + +R   K EL  
Sbjct: 1033 KLQFVKAKLKEWNKTSFGELSKKKKDILAVLANFDSLEQEGGLSQELLVQRAFSKGELEE 1092

Query: 354  LAVNEEIMWRQRCKSKWFMEGDVNSAFFHRLVAANRRKCSIHEI--LSVMAMERPHAEKG 413
            L + EEI WRQ+ + KW  EGD NS FFH++    R +  I E+   S + +  P + K 
Sbjct: 1093 LILREEIHWRQKARVKWVKEGDCNSKFFHKVANGRRNRKFIKELENESGLMLNNPESIKE 1152

Query: 414  KIL 415
            +IL
Sbjct: 1153 EIL 1155

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BLAST of Spg006214 vs. TAIR 10
Match: AT1G43760.1 (DNAse I-like superfamily protein )

HSP 1 Score: 57.4 bits (137), Expect = 3.5e-08
Identity = 44/158 (27.85%), Postives = 72/158 (45.57%), Query Frame = 0


Query: 239 SDHYPISLSL-GKNRWGPSPFRFHNVWLTHQSFSATVDQWWKASPSFGWPGHGFIQKLKG 298
           SDH P  + L    +     FR+ +   TH +F  ++   W+     G       + LK 
Sbjct: 312 SDHSPCIIILENLPKRSKKCFRYFSFLSTHPTFLVSLTVAWEEQIPVGSHMFSLGEHLKA 371

Query: 299 LKKELKLWNQTVFGN----QKDQRDRLSRELSVIDSKEDRGEISEQDISRRTSIKAELFS 358
            KK  KL N+  FGN     K+  D L    S + +         + ++R+   K   F+
Sbjct: 372 AKKCCKLLNRQGFGNIQHKTKEALDSLESIQSQLLTNPSDSLFRVEHVARK---KWNFFA 431

Query: 359 LAVNEEIMWRQRCKSKWFMEGDVNSAFFHRLVAANRRK 392
            A+  E  +RQ+ + KW  +GD N+ FFH+++ AN+ K
Sbjct: 432 AAL--ESFYRQKSRIKWLQDGDANTRFFHKVILANQAK 464

The following BLAST results are available for this feature:

BLAST of Spg006214 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158956.1	2.2e-36	44.38	uncharacterized protein LOC111025405 [Momordica charantia]	[more]
RVW35206.1	2.5e-32	40.35	hypothetical protein CK203_101901 [Vitis vinifera]	[more]
RVW91038.1	7.3e-32	40.44	Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]	[more]
RVW90400.1	7.3e-32	40.44	Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]	[more]
CAN69126.1	7.3e-32	40.44	hypothetical protein VITISV_008195 [Vitis vinifera]	[more]

BLAST of Spg006214 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg006214 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E2G6	1.1e-36	44.38	uncharacterized protein LOC111025405 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A438DIM3	1.2e-32	40.35	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_101901 PE=4 SV=1	[more]
A0A438I2T6	3.6e-32	40.44	Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX...	[more]
A0A438FW30	3.6e-32	39.77	Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX...	[more]
A5AK27	3.6e-32	40.44	Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VI...	[more]

BLAST of Spg006214 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G43760.1	3.5e-08	27.85	DNAse I-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..112
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..74
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..57
None	No IPR available	PANTHER	PTHR33710	BNAC02G09200D PROTEIN	coord: 233..378
None	No IPR available	PANTHER	PTHR33710:SF21	ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN	coord: 233..378

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg006214.1	Spg006214.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050789	regulation of biological process