Spg006196 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg006196
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Exopolygalacturonase-like
Location	scaffold4: 5613770 .. 5616839 (-)
RNA-Seq Expression	Spg006196
Synteny	Spg006196

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAATGACGGTTTCTGCGTTGGTGCTGGCGATGGTTGGTGGCGGGCAACTGGTGGGTGGTGGTGAAGAAGAAGAAGAAAATGAAAAAGAAGAGAGAGAAGAAGAATAATTTTTAAAAAATTAGAAAAAAAATATTTTTTAATAAAAAAAATAGGTGTCACATTTGAATTCTGTTAACATTTAATGGAAAAATGGATGGAGGGACTAAAAAGAAACAAAATCCAAACCTCAGGAACTAAAATGTCGAGTTTGAAAACTCAGAGACCAAAATGAAACATAACCCAAACCTCATAGATCAAAAGTGTATTTTTTATAAATTCCCTTAATAATTATAATTAAATATAGATTCATTAATTTTATAATTAATTTATAGAAATTGAATTAACAAAACTTTTTTATATTCTAACCTTTCATATTTTAACCCATCATATTATAACTAATTAATTTAAATAATTAGAAAACTATTGTAGTTATTAAAATTCATATTATTAATAATTAATGTAAATCAATAAGGAGCATAATTGTCTAAAAAAGTTTTTTTTAAATGATGGTAGCTTATTAATATATAATAGATGTTGGATAAAAATTTGAAAATTTCTTCCAAATTATTTAAACAGGTGTTTGGTTTAGAAAGGAGGTTAAATATTTGTACATAATATAATTTCTCATGTAGGATAGTATTGAAAGAAATTAGACCTAGGGAAAATATTTGATAAATACTACCACAAAGAAAGGTAACGGTGAAAAATTTCCAAACATACTATTACTTATATCAACTAGATTAAAAGAAAAAAAAAATCACCAACATTAATATTCCAAAATCCTTTCGTATTTTTAGTTATCGTCCTATTGGAATATACACCTATTTTGGCCATTTGACGTAAGACCAACATACAAATTAATAAACTATCTTACTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCTATCGAACTAACCTTGGACATAACCGAACCGTACTCATATAAATAGAATCAAGTAATCATTTCTTATTCAATTTTTAGAGGGTGATTTTCAATCGGATTCATACCTCATATCTTTTTTATGCCACTTGTTGCACGCTTTGTGTCGTGTGGCTATGCATGTTTGTTTGTAATAGAAATTTAACGAATGAATGAATTTTATTGGGATGTGAGAACTAGTCATTCCAATGTTTAAGGAAGATCCAATGGCAAGAACATAATCGTTTAACTTCAACCGCACATTGTTCTTTGACAAATTTAACTAATCAGAATTAAGAGAGAATTATCAATATGATTGATTTTCTCCTCGCACGTATATAAAGAGGGTGGGATGAATATCGATATTTGGAACACTAATTCCAATTTCCAAGTTAGCAATCTGAACAAGGAGAAAATAAAAAAAGTAGAAGGTATATACATAAAGAATGGGATCCAGAGCAGACTTTGTAGCATTACTACCTTTGCTATTATTGTTGGTGTCTACCACTAAAGGTCAATCTGTTTTTGATGTCACAAAGTATGGTGCCAAGCCTAATACTGATATTACTCAAGTAAGTATATATTAGTAATTTGATAAATCATTCTAATTTATAAGGAAATATTTTAGCAAATGCATGGAAGGAAGCATGTGCGTCGACAACTCCAAGTAAAGTGTTGGTTCCAAAAGGAGTTTACCAATTAAGTCAATCCAACCTCAAAGGCCCTTGCAAGAGTCCTATTGAGTTTCAAGTCGAAGGGACGTTACAAGCTCCTCCCCACCCAACAGGAGATGGGTTGGTTCTTTTGGAATATATTGATCCATTGACATTGTCAGGCACTGGAGTGTTTGACGGCCAAGGAAAAGCAGGTTGGGAAAAGAATGATTGCCATCAGAAGAAAATATGTACCAAGCTTCCCATGGTAAACGCTCTAACTATAGTGGTCTTTTTTTTTTTTTTTTGGGCCTAATATCATACATTATTTAATCACAAATAATCTCAATTAGCATAAATGTTTTAACTCCAATTTTTTTTTTTTTAAATGAACGCAGACCTTGAAGTTCAATTTTGTCACCAATTCGTTAGTGAAGGACATAACTTCATTGGATAGTAAGAATTTTCATATCAATCTTTTGGGCTGCAAGAATCTTATTTTTCAACACGTGACAATTACTGCACCAGAGGATAGCCCCAACACGGACGGAATTCATCTGAGTAGTTCAGAACAGATTAACATTCTCGATACTAAAATCGCTACTGGAGATGATTGTGTATCTGTAGGAGATAGTAACAAACAAATAACTATTACTAACGTAACTTGCGGACCAGGACATGGCATTAGCATAGGAAGTTTGGGCAAGTACACAAAGGAAAAAGACGTGGTTGGAGTTTTCGTAAAAAAATGCAAAATAATGAGTACTACAAATGGTGTCAGGATCAAAACATGGCCAGATTCTGCCGGTGCATTCTCAGCCACTGACATGCATTTTGAAGATATTGAAATGGTTAATGTCACAATCCGGTCATTATAGACCAAGAATATTGTCCATGGAATCAATGCAACCGAAAGGTATATATATGTTGGAATTATTATGTGTCATTCATTTTCAACTTAATTATTATTAACTTTAAGAAGTATTATAAAAAAAATGCACAGTTGAGTGATTCTTATGTTAATAAATATATATATTTTTGGTACCTTTAGGTTGCATCAAAAATTAAGATTAGCAAAGTTAGCTTCAAGAATATCAGAGGTACTTCTGCTACTCCAGTCGCAGTCAAACTTGTTTGCAGCAAAAGTCTACCATGTGAAGGTGTAGAAGTTGCTGATATTGACCTCACCTACAGTGGAACCCAAGGACCGATTAAGTCTCAGTGTTCAAATGTGAAACCCACCATTACTGGAAAGCAAAACCCTCCCATATGTGCTGAACCTGCCCCTATTGATGCTCCATCAACTGACTAATATTTTCACAATGACAAAAAAAAATTACCAAACCATTAGAAATTCCTTTTTTTTTTTTTTTTTGCCACATTTTTGTTTTACATTCAAAATTCTTTAGGTCTACTCCATTAAATAATG

mRNA sequence

ATGGGGAATGACGGTTTCTGCGTTGGTGCTGGCGATGGTTGGTGGCGGGCAACTGGTCAATCTGTTTTTGATGTCACAAAGTATGGTGCCAAGCCTAATACTGATATTACTCAAGAAGCATGTGCGTCGACAACTCCAAGTAAAGTGTTGGTTCCAAAAGGAGTTTACCAATTAAGTCAATCCAACCTCAAAGGCCCTTGCAAGAGTCCTATTGAGTTTCAAGTCGAAGGGACGTTACAAGCTCCTCCCCACCCAACAGGAGATGGGTTGGTTCTTTTGGAATATATTGATCCATTGACATTGTCAGGCACTGGAGTGTTTGACGGCCAAGGAAAAGCAGGTTGGGAAAAGAATGATTGCCATCAGAAGAAAATATGTACCAAGCTTCCCATGGACATAACTTCATTGGATAGTAAGAATTTTCATATCAATCTTTTGGGCTGCAAGAATCTTATTTTTCAACACGTGACAATTACTGCACCAGAGGATAGCCCCAACACGGACGGAATTCATCTGAGTAGTTCAGAACAGATTAACATTCTCGATACTAAAATCGCTACTGGAGATGATTGTGTATCTGTAGGAGATAGTAACAAACAAATAACTATTACTAACGTAACTTGCGGACCAGGACATGGCATTAGCATAGGAAGTTTGGGCAAGTACACAAAGGAAAAAGACGTGGTTGGAGTTTTCGTAAAAAAATGCAAAATAATGAGTACTACAAATGGTGTCAGGATCAAAACATGGCCAGATTCTGCCGGTGCATTCTCAGCCACTGACATGCATTTTGAAGATATTGAAATGGTTGCATCAAAAATTAAGATTAGCAAAGTTAGCTTCAAGAATATCAGAGGTACTTCTGCTACTCCAGTCGCAGTCAAACTTGTTTGCAGCAAAAGTCTACCATGTGAAGGTGTAGAAGTTGCTGATATTGACCTCACCTACAGTGGAACCCAAGGACCGATTAAGTCTCAGTGTTCAAATGTGAAACCCACCATTACTGGAAAGCAAAACCCTCCCATATGTGCTGAACCTGCCCCTATTGATGCTCCATCAACTGACTAA

Coding sequence (CDS)

ATGGGGAATGACGGTTTCTGCGTTGGTGCTGGCGATGGTTGGTGGCGGGCAACTGGTCAATCTGTTTTTGATGTCACAAAGTATGGTGCCAAGCCTAATACTGATATTACTCAAGAAGCATGTGCGTCGACAACTCCAAGTAAAGTGTTGGTTCCAAAAGGAGTTTACCAATTAAGTCAATCCAACCTCAAAGGCCCTTGCAAGAGTCCTATTGAGTTTCAAGTCGAAGGGACGTTACAAGCTCCTCCCCACCCAACAGGAGATGGGTTGGTTCTTTTGGAATATATTGATCCATTGACATTGTCAGGCACTGGAGTGTTTGACGGCCAAGGAAAAGCAGGTTGGGAAAAGAATGATTGCCATCAGAAGAAAATATGTACCAAGCTTCCCATGGACATAACTTCATTGGATAGTAAGAATTTTCATATCAATCTTTTGGGCTGCAAGAATCTTATTTTTCAACACGTGACAATTACTGCACCAGAGGATAGCCCCAACACGGACGGAATTCATCTGAGTAGTTCAGAACAGATTAACATTCTCGATACTAAAATCGCTACTGGAGATGATTGTGTATCTGTAGGAGATAGTAACAAACAAATAACTATTACTAACGTAACTTGCGGACCAGGACATGGCATTAGCATAGGAAGTTTGGGCAAGTACACAAAGGAAAAAGACGTGGTTGGAGTTTTCGTAAAAAAATGCAAAATAATGAGTACTACAAATGGTGTCAGGATCAAAACATGGCCAGATTCTGCCGGTGCATTCTCAGCCACTGACATGCATTTTGAAGATATTGAAATGGTTGCATCAAAAATTAAGATTAGCAAAGTTAGCTTCAAGAATATCAGAGGTACTTCTGCTACTCCAGTCGCAGTCAAACTTGTTTGCAGCAAAAGTCTACCATGTGAAGGTGTAGAAGTTGCTGATATTGACCTCACCTACAGTGGAACCCAAGGACCGATTAAGTCTCAGTGTTCAAATGTGAAACCCACCATTACTGGAAAGCAAAACCCTCCCATATGTGCTGAACCTGCCCCTATTGATGCTCCATCAACTGACTAA

Protein sequence

MGNDGFCVGAGDGWWRATGQSVFDVTKYGAKPNTDITQEACASTTPSKVLVPKGVYQLSQSNLKGPCKSPIEFQVEGTLQAPPHPTGDGLVLLEYIDPLTLSGTGVFDGQGKAGWEKNDCHQKKICTKLPMDITSLDSKNFHINLLGCKNLIFQHVTITAPEDSPNTDGIHLSSSEQINILDTKIATGDDCVSVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKDVVGVFVKKCKIMSTTNGVRIKTWPDSAGAFSATDMHFEDIEMVASKIKISKVSFKNIRGTSATPVAVKLVCSKSLPCEGVEVADIDLTYSGTQGPIKSQCSNVKPTITGKQNPPICAEPAPIDAPSTD

Homology

[Close]

BLAST of Spg006196 vs. NCBI nr
Match: XP_031744817.1 (exopolygalacturonase-like [Cucumis sativus] >KAE8645715.1 hypothetical protein Csa_020330 [Cucumis sativus])

HSP 1 Score: 567.4 bits (1461), Expect = 8.8e-158
Identity = 286/379 (75.46%), Postives = 316/379 (83.38%), Query Frame = 0


Query: 20  QSVFDVTKYGAKPNTDITQ-------EACASTTPSKVLVPKGVYQLSQSNLKGPCKS-PI 79
           QS+FDVT+YGAKPNTDITQ       EAC STTPSK+L+PKGVYQLSQS LKGPCKS PI
Sbjct: 19  QSLFDVTRYGAKPNTDITQALANAWKEACMSTTPSKLLIPKGVYQLSQSYLKGPCKSVPI 78

Query: 80  EFQVEGTLQAPPHPTGDGLVLLEYIDPLTLSGTGVFDGQGKAGWEKNDCHQKKICTKLPM 139
           + QV+GTL+AP HP GDGLVL  YID L LSGTGVFDGQGKAGW+KNDCH+KKICTKLPM
Sbjct: 79  QVQVDGTLKAPLHPNGDGLVLFAYIDQLMLSGTGVFDGQGKAGWDKNDCHKKKICTKLPM 138

Query: 140 -------------DITSLDSKNFHINLLGCKNLIFQHVTITAPEDSPNTDGIHLSSSEQI 199
                        DITSLDSKNFHINLLGCKN+ FQHVTI+APE+SPNTDGIH+SSSEQI
Sbjct: 139 NLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQI 198

Query: 200 NILDTKIATGDDCVSVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKDVVGVFVKKCKI 259
           NILD+KI+TGDDCVSVGDSNKQ+TITNVTCGPGHGIS+GSLGKYTKEKDVVGV VK CK+
Sbjct: 199 NILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGSLGKYTKEKDVVGVSVKACKL 258

Query: 260 MSTTNGVRIKTWPDSAGAFSATDMHFEDIEM----------------------VASKIKI 319
           ++TTNGVRIKTWPDSAGAF A+DMHFEDIEM                      V SKIKI
Sbjct: 259 INTTNGVRIKTWPDSAGAFIASDMHFEDIEMQNVSNPVIIDQEYCPWNQCNRKVPSKIKI 318

Query: 320 SKVSFKNIRGTSATPVAVKLVCSKSLPCEGVEVADIDLTYSGTQGPIKSQCSNVKPTITG 356
           SKVSFKNIRGTSATP+AVKLVCSKS+PCEGVEVADI+LTYSG +GPI S+C+NV+P ITG
Sbjct: 319 SKVSFKNIRGTSATPIAVKLVCSKSIPCEGVEVADINLTYSGIRGPILSECANVQPLITG 378

[Close]

BLAST of Spg006196 vs. NCBI nr
Match: XP_031744814.1 (exopolygalacturonase-like [Cucumis sativus] >XP_031744815.1 LOW QUALITY PROTEIN: exopolygalacturonase [Cucumis sativus] >XP_031744816.1 exopolygalacturonase-like [Cucumis sativus] >XP_031744818.1 exopolygalacturonase-like [Cucumis sativus] >KAE8645716.1 hypothetical protein Csa_020252 [Cucumis sativus])

HSP 1 Score: 567.4 bits (1461), Expect = 8.8e-158
Identity = 286/379 (75.46%), Postives = 316/379 (83.38%), Query Frame = 0


Query: 20  QSVFDVTKYGAKPNTDITQ-------EACASTTPSKVLVPKGVYQLSQSNLKGPCKS-PI 79
           QS+FDVT+YGAKPNTDITQ       EAC STTPSK+L+PKGVYQLSQS LKGPCKS PI
Sbjct: 19  QSLFDVTRYGAKPNTDITQALANAWKEACMSTTPSKLLIPKGVYQLSQSYLKGPCKSVPI 78

Query: 80  EFQVEGTLQAPPHPTGDGLVLLEYIDPLTLSGTGVFDGQGKAGWEKNDCHQKKICTKLPM 139
           + QV+GTL+AP HP GDGLVL  YID L LSGTGVFDGQGKAGW+KNDCH+KKICTKLPM
Sbjct: 79  QVQVDGTLKAPLHPNGDGLVLFAYIDQLMLSGTGVFDGQGKAGWDKNDCHKKKICTKLPM 138

Query: 140 -------------DITSLDSKNFHINLLGCKNLIFQHVTITAPEDSPNTDGIHLSSSEQI 199
                        DITSLDSKNFHINLLGCKN+ FQHVTI+APE+SPNTDGIH+SSSEQI
Sbjct: 139 NLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQI 198

Query: 200 NILDTKIATGDDCVSVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKDVVGVFVKKCKI 259
           NILD+KI+TGDDCVSVGDSNKQ+TITNVTCGPGHGIS+GSLGKYTKEKDVVGV VK CK+
Sbjct: 199 NILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGSLGKYTKEKDVVGVTVKACKL 258

Query: 260 MSTTNGVRIKTWPDSAGAFSATDMHFEDIEM----------------------VASKIKI 319
           ++TTNGVRIKTWPDSAGAF A+DMHFEDIEM                      V SKIKI
Sbjct: 259 INTTNGVRIKTWPDSAGAFIASDMHFEDIEMQNVSNPVIIDQEYCPWNQCNRKVPSKIKI 318

Query: 320 SKVSFKNIRGTSATPVAVKLVCSKSLPCEGVEVADIDLTYSGTQGPIKSQCSNVKPTITG 356
           SKVSFKNIRGTSATP+AVKLVCSKS+PCEGVEVADI+LTYSG +GPI S+C+NV+P ITG
Sbjct: 319 SKVSFKNIRGTSATPIAVKLVCSKSIPCEGVEVADINLTYSGIRGPILSECANVQPLITG 378

[Close]

BLAST of Spg006196 vs. NCBI nr
Match: XP_011652893.2 (exopolygalacturonase [Cucumis sativus] >KGN64588.2 hypothetical protein Csa_014082 [Cucumis sativus])

HSP 1 Score: 563.1 bits (1450), Expect = 1.7e-156
Identity = 285/381 (74.80%), Postives = 308/381 (80.84%), Query Frame = 0


Query: 17  ATGQSVFDVTKYGAKPNTDIT-------QEACASTTPSKVLVPKGVYQLSQSNLKGPCKS 76
           A G  VFDVT +GAKPN DIT       ++ACASTTPSKVL+PKG Y LSQSNLKGPCKS
Sbjct: 26  AAGGGVFDVTSFGAKPNGDITGPLLVAWKDACASTTPSKVLIPKGSYGLSQSNLKGPCKS 85

Query: 77  PIEFQVEGTLQAPPHPTGDGLVLLEYIDPLTLSGTGVFDGQGKAGWEKNDCHQKKICTKL 136
           PIE Q+EGTLQA P P GDGL+LLEYID LT+SGTGV DGQGKAGWEKNDCH KKICTKL
Sbjct: 86  PIELQIEGTLQASPDPKGDGLLLLEYIDQLTVSGTGVLDGQGKAGWEKNDCHLKKICTKL 145

Query: 137 PM-------------DITSLDSKNFHINLLGCKNLIFQHVTITAPEDSPNTDGIHLSSSE 196
           PM             DITSLDSKN+HINLLGCKNL   HVTITAPE+SPNTDGIH+SSSE
Sbjct: 146 PMTLKLNFITNSIVKDITSLDSKNYHINLLGCKNLTIDHVTITAPENSPNTDGIHVSSSE 205

Query: 197 QINILDTKIATGDDCVSVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKDVVGVFVKKC 256
           QINIL+T IATGDDC+SVGD+NKQI I++VTCGPGHGISIGSLGKY+KEK+VVGV VKKC
Sbjct: 206 QINILNTNIATGDDCISVGDTNKQIVISDVTCGPGHGISIGSLGKYSKEKEVVGVTVKKC 265

Query: 257 KIMSTTNGVRIKTWPDSAGAFSATDMHFEDIEM----------------------VASKI 316
           K+ STTNGVRIKTWPDS G F ATDMHFEDIEM                      V SKI
Sbjct: 266 KLTSTTNGVRIKTWPDSVGTFPATDMHFEDIEMVNVSNPIIIDQEYCPWNQCNRKVPSKI 325

Query: 317 KISKVSFKNIRGTSATPVAVKLVCSKSLPCEGVEVADIDLTYSGTQGPIKSQCSNVKPTI 356
           KISKVSFKNIRGTSAT VAVK+VCS+S PCE VEVADIDLTYSG++GPIKSQC+NVKP I
Sbjct: 326 KISKVSFKNIRGTSATAVAVKIVCSQSNPCEEVEVADIDLTYSGSEGPIKSQCANVKPVI 385

[Close]

BLAST of Spg006196 vs. NCBI nr
Match: KAA0059167.1 (exopolygalacturonase-like [Cucumis melo var. makuwa] >KAA0059172.1 exopolygalacturonase-like [Cucumis melo var. makuwa] >TYK19347.1 exopolygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 559.3 bits (1440), Expect = 2.4e-155
Identity = 287/380 (75.53%), Postives = 310/380 (81.58%), Query Frame = 0


Query: 19  GQSVFDVTKYGAKPNTDITQ-------EACASTTPSKVLVPKGVYQLSQSNLKGPCKS-P 78
           GQS+FDVT YGAKPNTDITQ       EACASTTPS +L+PKGVYQLSQSNLKGPCKS P
Sbjct: 21  GQSIFDVTTYGAKPNTDITQALANAWTEACASTTPSTLLIPKGVYQLSQSNLKGPCKSVP 80

Query: 79  IEFQVEGTLQAPPHPTGDGLVLLEYIDPLTLSGTGVFDGQGKAGWEKNDCHQKKICTKLP 138
           I+ QVEGTLQAP H  GDGLVL  YID L LSG+GVFDGQGK+GWEKN+CH+KKICTKLP
Sbjct: 81  IQVQVEGTLQAPIHTKGDGLVLFSYIDQLILSGSGVFDGQGKSGWEKNNCHKKKICTKLP 140

Query: 139 M-------------DITSLDSKNFHINLLGCKNLIFQHVTITAPEDSPNTDGIHLSSSEQ 198
           M             DITSLDSKNFHINLLGCKN+ FQHVTI AP++SPNTDGIH+SSSE+
Sbjct: 141 MNLKFSFVTNSTVKDITSLDSKNFHINLLGCKNVTFQHVTIIAPDESPNTDGIHISSSEE 200

Query: 199 INILDTKIATGDDCVSVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKDVVGVFVKKCK 258
           I ILD+KIATGDDCVSVGDSNKQ+TITNVTCGPGHGISIGSLGKYTKEKDVVGV VK CK
Sbjct: 201 IYILDSKIATGDDCVSVGDSNKQVTITNVTCGPGHGISIGSLGKYTKEKDVVGVTVKACK 260

Query: 259 IMSTTNGVRIKTWPDSAGAFSATDMHFEDIEM----------------------VASKIK 318
           I +TTNGVRIKTWPDSA AF A+DMHFEDIEM                      V SKIK
Sbjct: 261 IFNTTNGVRIKTWPDSAVAFMASDMHFEDIEMENVSNPIIIDQEYCPWNQCNRKVPSKIK 320

Query: 319 ISKVSFKNIRGTSATPVAVKLVCSKSLPCEGVEVADIDLTYSGTQGPIKSQCSNVKPTIT 356
           IS VSFKNIRGTSATPVAVKLVCSKS+PCEGVEVADI+LTYSG +GPI S+C+NV PTIT
Sbjct: 321 ISNVSFKNIRGTSATPVAVKLVCSKSIPCEGVEVADINLTYSGNRGPIVSECANVMPTIT 380

[Close]

BLAST of Spg006196 vs. NCBI nr
Match: XP_011657634.1 (exopolygalacturonase [Cucumis sativus])

HSP 1 Score: 556.6 bits (1433), Expect = 1.5e-154
Identity = 280/376 (74.47%), Postives = 304/376 (80.85%), Query Frame = 0


Query: 22  VFDVTKYGAKPNTDIT-------QEACASTTPSKVLVPKGVYQLSQSNLKGPCKSPIEFQ 81
           VFD+TKYGAKPN DIT       +EACASTTPSKVL+PKG Y LSQSNLKGPCKSPIE Q
Sbjct: 44  VFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQ 103

Query: 82  VEGTLQAPPHPTGDGLVLLEYIDPLTLSGTGVFDGQGKAGWEKNDCHQKKICTKLPMD-- 141
           +EGTLQAP HP G+GL++LE  D LT+SGTGV DGQGKAGWEKNDCH KK CTKLPM+  
Sbjct: 104 IEGTLQAPAHPEGEGLLILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLK 163

Query: 142 -----------ITSLDSKNFHINLLGCKNLIFQHVTITAPEDSPNTDGIHLSSSEQINIL 201
                      ITSLDSKNFHINLLGCKNL F HVTITAP +SPNTDGIH+SSSEQINIL
Sbjct: 164 LNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINIL 223

Query: 202 DTKIATGDDCVSVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKDVVGVFVKKCKIMST 261
           +T IATGDDC+SVGDSNKQ+ I++VTCGPGHGISIGSLGKYTKEK+VVGV VKKCK+  T
Sbjct: 224 NTNIATGDDCISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGT 283

Query: 262 TNGVRIKTWPDSAGAFSATDMHFEDIEM----------------------VASKIKISKV 321
           TNGVRIKTWPDSA AF ATDMHFEDIEM                      VASKIKIS V
Sbjct: 284 TNGVRIKTWPDSAVAFPATDMHFEDIEMDNVSNPIIIDQEYCPWNQCNRKVASKIKISNV 343

Query: 322 SFKNIRGTSATPVAVKLVCSKSLPCEGVEVADIDLTYSGTQGPIKSQCSNVKPTITGKQN 356
           SFKNIRGTSAT +AVK+VCSKS+PCEGVE+ADIDLTYSG +GPIKSQC+NVKP ITGKQN
Sbjct: 344 SFKNIRGTSATAIAVKIVCSKSIPCEGVEIADIDLTYSGPEGPIKSQCANVKPVITGKQN 403

[Close]

BLAST of Spg006196 vs. ExPASy Swiss-Prot
Match: P24548 (Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 3.0e-100
Identity = 188/353 (53.26%), Postives = 236/353 (66.86%), Query Frame = 0


Query: 34  TDITQEACASTTPSKVLVPKGVYQLSQSNLKGPCKSPIEFQVEGTLQAPPHPT---GDGL 93
           T   +EACAS +PS +LVPKG + +    L+GPCKS I  Q++GTL+AP  P+   G G 
Sbjct: 7   TTAWKEACASASPSTILVPKGNFAVGLITLEGPCKSSIGLQLQGTLKAPADPSKIKGLGW 66

Query: 94  VLLEYIDPLTLSGTGVFDGQGKAGWEKNDCHQK-KICTKLPM-------------DITSL 153
           + L  ID LT+ G GVFDGQGK+ W +NDCH+   IC  L M             D+T+L
Sbjct: 67  INLNKIDLLTIFGGGVFDGQGKSAWVQNDCHKNGPICKTLSMNLRLYAVTNSILRDVTTL 126

Query: 154 DSKNFHINLLGCKNLIFQHVTITAPEDSPNTDGIHLSSSEQINILDTKIATGDDCVSVGD 213
           DSKNFH+N++GCKNL F+   I+A E S NTDGIH+  S+ +NI++T+I TGDDC+S+GD
Sbjct: 127 DSKNFHVNVIGCKNLTFERFKISAAETSINTDGIHIGRSDGVNIINTEIKTGDDCISLGD 186

Query: 214 SNKQITITNVTCGPGHGISIGSLGKYTKEKDVVGVFVKKCKIMSTTNGVRIKTWPDSAGA 273
            +K I ITN+TCGPGHGIS+GSLG+Y  E+ VVG++VK C I  + NGVRIKTWP S   
Sbjct: 187 GSKNINITNITCGPGHGISVGSLGRYKNEESVVGIYVKNCTITGSQNGVRIKTWPKSEPG 246

Query: 274 FSATDMHFEDIEM----------------------VASKIKISKVSFKNIRGTSATPVAV 333
             A++MHF+DI M                      V S +K+SK+SFKNI+GTS T  AV
Sbjct: 247 -EASEMHFQDITMNSVGTPILIDQGYCPYNQCTAEVPSSVKLSKISFKNIKGTSTTKEAV 306

Query: 334 KLVCSKSLPCEGVEVADIDLTYSGTQGPIKSQCSNVKPTITGKQNPPICAEPA 348
           KLVCSKS PC GVE+ADIDLTYSG  GP  S C N+KPTI GKQ P IC+  A
Sbjct: 307 KLVCSKSFPCNGVELADIDLTYSGKGGPATSVCENIKPTIKGKQIPAICSGSA 358

[Close]

BLAST of Spg006196 vs. ExPASy Swiss-Prot
Match: Q05967 (Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 4.3e-99
Identity = 186/372 (50.00%), Postives = 240/372 (64.52%), Query Frame = 0


Query: 22  VFDVTKYGAKPNTDITQ-------EACASTTPSKVLVPKGVYQLSQSNLKGPCKSPIEFQ 81
           VFD+TKYGA  N DI++       EAC ST+PS +++PKG + ++Q  L+GPCKSP+E Q
Sbjct: 26  VFDITKYGANSNADISEALLNAFKEACQSTSPSTIVIPKGTFTMNQVKLEGPCKSPLELQ 85

Query: 82  VEGTLQAPPHPT----GDGLVLLEYIDPLTLSGTGVFDGQGKAGWEKNDCHQKKICTKLP 141
           ++ TL+AP  P+    G+ L  +  +D  T+SG G+ DGQ  A WE   C Q K C KLP
Sbjct: 86  IQATLKAPSDPSQLKVGEWLT-VNKLDQFTMSGGGILDGQAAAAWE---CKQSKKCNKLP 145

Query: 142 -------------MDITSLDSKNFHINLLGCKNLIFQHVTITAPEDSPNTDGIHLSSSEQ 201
                         DIT+LDSK+FH+N+  CKNL F    ++AP +SPNTDGIH+S S  
Sbjct: 146 NNLSFNSLTNSTIKDITTLDSKSFHVNVNQCKNLTFIRFNVSAPANSPNTDGIHVSRSSS 205

Query: 202 INILDTKIATGDDCVSVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKDVVGVFVKKCK 261
           +NI D+  +TGDDC+SVGD  +Q+ IT VTCGPGHGIS+GSLG    EK VVGVFV+ C 
Sbjct: 206 VNITDSNFSTGDDCISVGDETEQLYITRVTCGPGHGISVGSLGGNPDEKPVVGVFVRNCT 265

Query: 262 IMSTTNGVRIKTWPDSAGAFSATDMHFEDI----------------------EMVASKIK 321
             +T NGVRIKTWP S       D+HFEDI                      + + S++K
Sbjct: 266 FTNTDNGVRIKTWPASHPGV-VNDVHFEDIIVQNVSNPVVIDQVYCPFNKCNKDLPSQVK 325

Query: 322 ISKVSFKNIRGTSATPVAVKLVCSKSLPCEGVEVADIDLTYSGTQGPIKSQCSNVKPTIT 348
           ISKVSF+NI+GTS T  AV L+ SK +PCEG+EV DID+TYSG +GP KS C N+KP++ 
Sbjct: 326 ISKVSFQNIKGTSRTQDAVSLLRSKGVPCEGIEVGDIDITYSGKEGPAKSSCENIKPSLK 385

[Close]

BLAST of Spg006196 vs. ExPASy Swiss-Prot
Match: Q40312 (Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 4.9e-95
Identity = 180/388 (46.39%), Postives = 241/388 (62.11%), Query Frame = 0


Query: 17  ATGQSVFDVTKYGAKPNTDITQ-------EACASTTPSKVLVPKGVYQLSQSNLKGPCKS 76
           A    V D++K+G KPN+DI Q       EACASTT +K+++P G YQL+   LKGPCK+
Sbjct: 19  AAQSGVLDISKFGGKPNSDIGQALTSAWNEACASTTAAKIVIPAGTYQLNGIELKGPCKA 78

Query: 77  PIEFQVEGTLQAPPHPT----GDGLVLLEYIDPLTLSGTGVFDGQG---------KAGWE 136
           PIE QV+GT+QAP  P+     +      Y+D LTLSG GVFDGQG          + W 
Sbjct: 79  PIELQVDGTIQAPADPSVIKGTEQWFKFLYMDHLTLSGKGVFDGQGATVYKKAAPASAWS 138

Query: 137 KNDCHQKK--------ICTKLPMDITSLDSKNFHINLLGCKNLIFQHVTITAPEDSPNTD 196
             + + K         +   +   +TS DSKNFH+ + GCKN+ F   TITAP DSPNTD
Sbjct: 139 GKNSNSKVFMNFGFNFVNNSIVRGVTSKDSKNFHVMVFGCKNITFDGFTITAPGDSPNTD 198

Query: 197 GIHLSSSEQINILDTKIATGDDCVSVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKDV 256
           GIH+  S  + IL+T I TGDDCVS+GD +KQIT+  V CGPGHG+S+GSLGK+T E++V
Sbjct: 199 GIHMGKSTDVKILNTNIGTGDDCVSIGDGSKQITVQGVNCGPGHGLSVGSLGKFTTEENV 258

Query: 257 VGVFVKKCKIMSTTNGVRIKTWPDSAGAFSATDMHFEDIEMV------------------ 316
            G+ VK C + +T NGVRIKTWPD+ G  + +D+HFEDI M                   
Sbjct: 259 EGITVKNCTLTATDNGVRIKTWPDAPGTITVSDIHFEDITMTNVKNPVIIDQEYYPWNQC 318

Query: 317 ----ASKIKISKVSFKNIRGTSATPVAVKLVCSKSLPCEGVEVADIDLTYSGTQGPIKSQ 355
                SKIK+SK+SFKN++GTS T   V L+CS ++PC+GVE+ ++DL ++G   P  ++
Sbjct: 319 SKKNPSKIKLSKISFKNVKGTSGTAEGVVLICSSAVPCDGVELNNVDLKFNG--APTTAK 378

[Close]

BLAST of Spg006196 vs. ExPASy Swiss-Prot
Match: Q39786 (Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 3.3e-91
Identity = 173/371 (46.63%), Postives = 229/371 (61.73%), Query Frame = 0


Query: 25  VTKYGA---------KPNTDITQEACASTTPSKVLVPKGVYQLSQSNLKGPCKSPIEFQV 84
           V K+GA         KP  D  +EACAS TPS V++PKG Y LS+ NL+GPCK+PIE  V
Sbjct: 32  VAKFGAKADGKTDLSKPFLDAWKEACASVTPSTVVIPKGTYLLSKVNLEGPCKAPIEINV 91

Query: 85  EGTLQAPPHPTG---DGLVLLEYIDPLTLSGTGVFDGQGKAGWEKNDCHQKKICTKLPM- 144
           +GT+QAP  P+       V    ++   + G G+FDGQG   +EKN C  ++  +KLP+ 
Sbjct: 92  QGTIQAPADPSAFKDPNWVRFYSVENFKMFGGGIFDGQGSIAYEKNTCENREFRSKLPVN 151

Query: 145 ------------DITSLDSKNFHINLLGCKNLIFQHVTITAPEDSPNTDGIHLSSSEQIN 204
                       DITS DSK FHIN+  CKN+  + + I AP++SPNTDGIH+  SE +N
Sbjct: 152 IRFDFLTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVN 211

Query: 205 ILDTKIATGDDCVSVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKDVVGVFVKKCKIM 264
           I+ + I TGDDC+S+GD  K + I  +TCGPGHGISIGSLGK+  E+ V G+ +  C I 
Sbjct: 212 IIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTIT 271

Query: 265 STTNGVRIKTWPDSAGAFSATDMHFEDIEM----------------------VASKIKIS 324
           +T+NG RIKTWP   G  + +++HFEDI M                        SK+K+S
Sbjct: 272 NTSNGARIKTWPGEHGG-AVSEIHFEDITMNNVSSPILIDQQYCPWNKCKKNEESKVKLS 331

Query: 325 KVSFKNIRGTSATPVAVKLVCSKSLPCEGVEVADIDLTYSGTQGPIKSQCSNVKPTITGK 349
            +SFKNIRGTSA P A+K +CS S PC+ VE+ADID+ ++G + P  SQC NVKP  +GK
Sbjct: 332 NISFKNIRGTSALPEAIKFICSGSSPCQNVELADIDIKHNGAE-PATSQCLNVKPITSGK 391

[Close]

BLAST of Spg006196 vs. ExPASy Swiss-Prot
Match: Q39766 (Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 5.6e-91
Identity = 173/371 (46.63%), Postives = 228/371 (61.46%), Query Frame = 0


Query: 25  VTKYGA---------KPNTDITQEACASTTPSKVLVPKGVYQLSQSNLKGPCKSPIEFQV 84
           V K+GA         KP  D  +EACAS TPS V++PKG Y LS+ NL+GPCK+PIE  V
Sbjct: 32  VAKFGAKADGKTDLSKPFLDAWKEACASVTPSTVVIPKGTYLLSKVNLEGPCKAPIEINV 91

Query: 85  EGTLQAPPHPTG---DGLVLLEYIDPLTLSGTGVFDGQGKAGWEKNDCHQKKICTKLPM- 144
           +GT+QAP  P+       V    ++   + G G+FDGQG   +EKN C  ++  +KLP+ 
Sbjct: 92  QGTIQAPADPSAFKDPNWVRFYSVENFKMFGGGIFDGQGSIAYEKNTCENREFRSKLPVN 151

Query: 145 ------------DITSLDSKNFHINLLGCKNLIFQHVTITAPEDSPNTDGIHLSSSEQIN 204
                       DITS DSK FHIN+  CKN+  + + I AP++SPNTDGIH+  SE +N
Sbjct: 152 IRFDFVTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVN 211

Query: 205 ILDTKIATGDDCVSVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKDVVGVFVKKCKIM 264
           I+ + I TGDDC+S+GD  K + I  +TCGPGHGISIGSLGK+  E+ V G+ +  C I 
Sbjct: 212 IIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTIT 271

Query: 265 STTNGVRIKTWPDSAGAFSATDMHFEDIEM----------------------VASKIKIS 324
           +T+NG RIKTWP   G  + +++HFEDI M                        SK+K+S
Sbjct: 272 NTSNGARIKTWPGEHGG-AVSEIHFEDITMNNVSSPILIDQQYCPWNKCKKNEESKVKLS 331

Query: 325 KVSFKNIRGTSATPVAVKLVCSKSLPCEGVEVADIDLTYSGTQGPIKSQCSNVKPTITGK 349
            +SFKNIRGTSA P A+K +CS S PC+ VE+ADID+ ++G + P  SQC NVKP   GK
Sbjct: 332 NISFKNIRGTSALPEAIKFICSGSSPCQNVELADIDIQHNGAE-PATSQCLNVKPITIGK 391

[Close]

BLAST of Spg006196 vs. ExPASy TrEMBL
Match: A0A5D3D708 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold295G00680 PE=3 SV=1)

HSP 1 Score: 559.3 bits (1440), Expect = 1.2e-155
Identity = 287/380 (75.53%), Postives = 310/380 (81.58%), Query Frame = 0


Query: 19  GQSVFDVTKYGAKPNTDITQ-------EACASTTPSKVLVPKGVYQLSQSNLKGPCKS-P 78
           GQS+FDVT YGAKPNTDITQ       EACASTTPS +L+PKGVYQLSQSNLKGPCKS P
Sbjct: 21  GQSIFDVTTYGAKPNTDITQALANAWTEACASTTPSTLLIPKGVYQLSQSNLKGPCKSVP 80

Query: 79  IEFQVEGTLQAPPHPTGDGLVLLEYIDPLTLSGTGVFDGQGKAGWEKNDCHQKKICTKLP 138
           I+ QVEGTLQAP H  GDGLVL  YID L LSG+GVFDGQGK+GWEKN+CH+KKICTKLP
Sbjct: 81  IQVQVEGTLQAPIHTKGDGLVLFSYIDQLILSGSGVFDGQGKSGWEKNNCHKKKICTKLP 140

Query: 139 M-------------DITSLDSKNFHINLLGCKNLIFQHVTITAPEDSPNTDGIHLSSSEQ 198
           M             DITSLDSKNFHINLLGCKN+ FQHVTI AP++SPNTDGIH+SSSE+
Sbjct: 141 MNLKFSFVTNSTVKDITSLDSKNFHINLLGCKNVTFQHVTIIAPDESPNTDGIHISSSEE 200

Query: 199 INILDTKIATGDDCVSVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKDVVGVFVKKCK 258
           I ILD+KIATGDDCVSVGDSNKQ+TITNVTCGPGHGISIGSLGKYTKEKDVVGV VK CK
Sbjct: 201 IYILDSKIATGDDCVSVGDSNKQVTITNVTCGPGHGISIGSLGKYTKEKDVVGVTVKACK 260

Query: 259 IMSTTNGVRIKTWPDSAGAFSATDMHFEDIEM----------------------VASKIK 318
           I +TTNGVRIKTWPDSA AF A+DMHFEDIEM                      V SKIK
Sbjct: 261 IFNTTNGVRIKTWPDSAVAFMASDMHFEDIEMENVSNPIIIDQEYCPWNQCNRKVPSKIK 320

Query: 319 ISKVSFKNIRGTSATPVAVKLVCSKSLPCEGVEVADIDLTYSGTQGPIKSQCSNVKPTIT 356
           IS VSFKNIRGTSATPVAVKLVCSKS+PCEGVEVADI+LTYSG +GPI S+C+NV PTIT
Sbjct: 321 ISNVSFKNIRGTSATPVAVKLVCSKSIPCEGVEVADINLTYSGNRGPIVSECANVMPTIT 380

[Close]

BLAST of Spg006196 vs. ExPASy TrEMBL
Match: A0A6J1C2U8 (exopolygalacturonase-like OS=Momordica charantia OX=3673 GN=LOC111007858 PE=3 SV=1)

HSP 1 Score: 554.3 bits (1427), Expect = 3.7e-154
Identity = 277/376 (73.67%), Postives = 307/376 (81.65%), Query Frame = 0


Query: 22  VFDVTKYGAKPNTDITQ-------EACASTTPSKVLVPKGVYQLSQSNLKGPCKSPIEFQ 81
           VFDV KYGAKPN DITQ       EACAST+PSK+L+PKG YQL  ++ +GPCKS I+ Q
Sbjct: 37  VFDVAKYGAKPNADITQAVASAWKEACASTSPSKLLIPKGSYQLKGASFRGPCKSAIDIQ 96

Query: 82  VEGTLQAPPHPTGDGLVLLEYIDPLTLSGTGVFDGQGKAGWEKNDCHQKKICTKLPM--- 141
           V+GTLQAPPHP G+G ++LEYID LTLSGTGVFDGQGKAGWEKNDCH KKICTKLPM   
Sbjct: 97  VDGTLQAPPHPKGEGWIMLEYIDQLTLSGTGVFDGQGKAGWEKNDCHLKKICTKLPMSLK 156

Query: 142 ----------DITSLDSKNFHINLLGCKNLIFQHVTITAPEDSPNTDGIHLSSSEQINIL 201
                     DITSLDSKNFHINLLGCKN+ FQHVTI+AP+ SPNTDGIH+SSSE INIL
Sbjct: 157 FNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINIL 216

Query: 202 DTKIATGDDCVSVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKDVVGVFVKKCKIMST 261
           +T I TGDDC+SVGDSN QITI++VTCGPGHGISIGSLGKY+KEKDV+GVFVKKCK+ ST
Sbjct: 217 NTNIGTGDDCISVGDSNSQITISDVTCGPGHGISIGSLGKYSKEKDVIGVFVKKCKLTST 276

Query: 262 TNGVRIKTWPDSAGAFSATDMHFEDIEM----------------------VASKIKISKV 321
           TNGVRIKTWPDSAGAF A+DMHFEDIEM                      V SKIKISKV
Sbjct: 277 TNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKV 336

Query: 322 SFKNIRGTSATPVAVKLVCSKSLPCEGVEVADIDLTYSGTQGPIKSQCSNVKPTITGKQN 356
           SFKNIRGTSATPVAVKLVCS S PCEGVEVADI+LTY+G QGPIKS+C+NVKPTITG+QN
Sbjct: 337 SFKNIRGTSATPVAVKLVCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQN 396

[Close]

BLAST of Spg006196 vs. ExPASy TrEMBL
Match: A0A5D3DYI3 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold303G00050 PE=3 SV=1)

HSP 1 Score: 552.7 bits (1423), Expect = 1.1e-153
Identity = 277/377 (73.47%), Postives = 305/377 (80.90%), Query Frame = 0


Query: 21  SVFDVTKYGAKPNTDIT-------QEACASTTPSKVLVPKGVYQLSQSNLKGPCKSPIEF 80
           SVFD+TKYGAKPN D+T       +EACASTTPSKVL+PKG Y LSQSNLKGPCKS IE 
Sbjct: 28  SVFDITKYGAKPNADVTAALVSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSAIEL 87

Query: 81  QVEGTLQAPPHPTGDGLVLLEYIDPLTLSGTGVFDGQGKAGWEKNDCHQKKICTKLPM-- 140
           Q+EGTLQAP  P GDGL+LLEY+D LT+SGTGV DGQGKAGWEKNDCH KK CTKLPM  
Sbjct: 88  QIEGTLQAPADPKGDGLLLLEYVDQLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNL 147

Query: 141 -----------DITSLDSKNFHINLLGCKNLIFQHVTITAPEDSPNTDGIHLSSSEQINI 200
                      DITSLDSKN+HINLLGCKNL F HVTITAP +SPNTDGIH+SSSEQINI
Sbjct: 148 KLNFVTNSIVKDITSLDSKNYHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINI 207

Query: 201 LDTKIATGDDCVSVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKDVVGVFVKKCKIMS 260
           L+T IATGDDC+SVGD+NKQ+ I++VTCGPGHGISIGSLGKY+KEK+VVGV VKKCK+  
Sbjct: 208 LNTNIATGDDCISVGDTNKQVVISDVTCGPGHGISIGSLGKYSKEKEVVGVTVKKCKLTD 267

Query: 261 TTNGVRIKTWPDSAGAFSATDMHFEDIEM----------------------VASKIKISK 320
           TTNGVRIKTWPDSA AF A+DMHFEDIEM                      V SKIKIS 
Sbjct: 268 TTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISN 327

Query: 321 VSFKNIRGTSATPVAVKLVCSKSLPCEGVEVADIDLTYSGTQGPIKSQCSNVKPTITGKQ 356
           VSFKNIRGTSATPVAVK+VCS+S PCEGVEVADIDLTYSG++GPIKSQC+NVKP I+GKQ
Sbjct: 328 VSFKNIRGTSATPVAVKIVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVISGKQ 387

[Close]

BLAST of Spg006196 vs. ExPASy TrEMBL
Match: A0A5A7UTD3 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G00800 PE=3 SV=1)

HSP 1 Score: 551.6 bits (1420), Expect = 2.4e-153
Identity = 283/376 (75.27%), Postives = 306/376 (81.38%), Query Frame = 0


Query: 19  GQSVFDVTKYGAKPNTDITQ-------EACASTTPSKVLVPKGVYQLSQSNLKGPCKS-P 78
           GQS+FDVT YGAKPNTDITQ       EACASTTPS +L+PKGVYQLSQSNLKGPCKS P
Sbjct: 21  GQSIFDVTTYGAKPNTDITQALANAWTEACASTTPSTLLIPKGVYQLSQSNLKGPCKSVP 80

Query: 79  IEFQVEGTLQAPPHPTGDGLVLLEYIDPLTLSGTGVFDGQGKAGWEKNDCHQKKICTKLP 138
           I+ QVEGTLQAP H  GDGLVL  YID L LSG+GVFDGQGK+GWEKN+CH+KKICTKLP
Sbjct: 81  IQVQVEGTLQAPIHTKGDGLVLFSYIDQLILSGSGVFDGQGKSGWEKNNCHKKKICTKLP 140

Query: 139 M-------------DITSLDSKNFHINLLGCKNLIFQHVTITAPEDSPNTDGIHLSSSEQ 198
           M             DITSLDSKNFHINLLGCKN+ FQHVTI AP++SPNTDGIH+SSSE+
Sbjct: 141 MNLKFSFVTNSTVKDITSLDSKNFHINLLGCKNVTFQHVTIIAPDESPNTDGIHISSSEE 200

Query: 199 INILDTKIATGDDCVSVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKDVVGVFVKKCK 258
           I ILD+KIATGDDCVSVGDSNKQ+TITNVTCGPGHGISIGSLGKYTKEKDVVGV VK CK
Sbjct: 201 IYILDSKIATGDDCVSVGDSNKQVTITNVTCGPGHGISIGSLGKYTKEKDVVGVTVKACK 260

Query: 259 IMSTTNGVRIKTWPDSAGAFSATDMHFEDIEM----------------------VASKIK 318
           I +TTNGVRIKTWPDSA AF A+DMHFEDIEM                      V SKIK
Sbjct: 261 IFNTTNGVRIKTWPDSAVAFMASDMHFEDIEMENVSNPIIIDQEYCPWNQCNRKVPSKIK 320

Query: 319 ISKVSFKNIRGTSATPVAVKLVCSKSLPCEGVEVADIDLTYSGTQGPIKSQCSNVKPTIT 352
           IS VSFKNIRGTSATPVAVKLVCSKS+PCEGVEVADI+LTYSG +GPI S+C+NV PTIT
Sbjct: 321 ISNVSFKNIRGTSATPVAVKLVCSKSIPCEGVEVADINLTYSGNRGPIVSECANVMPTIT 380

[Close]

BLAST of Spg006196 vs. ExPASy TrEMBL
Match: A0A5A7TRZ0 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00600 PE=3 SV=1)

HSP 1 Score: 551.2 bits (1419), Expect = 3.1e-153
Identity = 276/376 (73.40%), Postives = 304/376 (80.85%), Query Frame = 0


Query: 22  VFDVTKYGAKPNTDIT-------QEACASTTPSKVLVPKGVYQLSQSNLKGPCKSPIEFQ 81
           VFD+TKYGAKPN D+T       +EACASTTPSKVL+PKG Y LSQSNLKGPCKS IE Q
Sbjct: 29  VFDITKYGAKPNADVTAALASAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSAIELQ 88

Query: 82  VEGTLQAPPHPTGDGLVLLEYIDPLTLSGTGVFDGQGKAGWEKNDCHQKKICTKLPM--- 141
           +EGTLQAP  P GDGL+LLEY+D LT+SGTGV DGQGKAGWEKNDCH KK CTKLPM   
Sbjct: 89  IEGTLQAPADPKGDGLLLLEYVDQLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLK 148

Query: 142 ----------DITSLDSKNFHINLLGCKNLIFQHVTITAPEDSPNTDGIHLSSSEQINIL 201
                     DITSLDSKN+HINLLGCKNL F HVTITAP +SPNTDGIH+SSSEQINIL
Sbjct: 149 LNFVTNSIVKDITSLDSKNYHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINIL 208

Query: 202 DTKIATGDDCVSVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKDVVGVFVKKCKIMST 261
           +T IATGDDC+SVGD+NKQ+ I++VTCGPGHGISIGSLGKY+KEK+VVGV VKKCK+  T
Sbjct: 209 NTNIATGDDCISVGDTNKQVVISDVTCGPGHGISIGSLGKYSKEKEVVGVTVKKCKLTDT 268

Query: 262 TNGVRIKTWPDSAGAFSATDMHFEDIEM----------------------VASKIKISKV 321
           TNGVRIKTWPDSA AF A+DMHFEDIEM                      V SKIKIS V
Sbjct: 269 TNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISNV 328

Query: 322 SFKNIRGTSATPVAVKLVCSKSLPCEGVEVADIDLTYSGTQGPIKSQCSNVKPTITGKQN 356
           SFKNIRGTSATPVAVK+VCS+S PCEGVEVADIDLTYSG++GPIKSQC+NVKP I+GKQN
Sbjct: 329 SFKNIRGTSATPVAVKIVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVISGKQN 388

[Close]

BLAST of Spg006196 vs. TAIR 10
Match: AT3G07820.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 335.1 bits (858), Expect = 6.8e-92
Identity = 169/368 (45.92%), Postives = 230/368 (62.50%), Query Frame = 0


Query: 24  DVTKYGAKPNTDITQ-------EACASTTPSKVLVPKGVYQLSQSNLKGPCKSPIEFQVE 83
           +V   G+   +DITQ        AC S++PSKV++PKG ++L +  ++GPCK+PIE  ++
Sbjct: 23  EVFTIGSSSGSDITQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCKAPIEVTLQ 82

Query: 84  GTLQAPPHPT--GDGLVLLEYIDPLTLSGTGVFDGQGKAGWEKNDCHQKKICTKLPM--- 143
           GT++A  +     +  V+   ID   L+G G FDG+G A W  N+CH+   C KLP+   
Sbjct: 83  GTVKADGNAIQGKEKWVVFGNIDGFKLNGGGAFDGEGNAAWRVNNCHKTFECKKLPISIR 142

Query: 144 ----------DITSLDSKNFHINLLGCKNLIFQHVTITAPEDSPNTDGIHLSSSEQINIL 203
                     DI+S+D+KNFHIN+LG KN+   ++ I APEDSPNTDGIHL  S+ + IL
Sbjct: 143 FDFILNSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGVKIL 202

Query: 204 DTKIATGDDCVSVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKDVVGVFVKKCKIMST 263
           ++ I+TGDDC+SVGD  K + +  VTCGPGHGIS+GSLG+Y  E+DV G+ V  C +  T
Sbjct: 203 NSFISTGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQET 262

Query: 264 TNGVRIKTWPDSAGAFSATDMHFEDI----------------------EMVASKIKISKV 323
            NG+RIKTWP +A + +A+D+HFEDI                      +  AS IK+  +
Sbjct: 263 DNGLRIKTWPSAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQKASTIKLVNI 322

Query: 324 SFKNIRGTSATPVAVKLVCSKSLPCEGVEVADIDLTYSGTQGPIKSQCSNVKPTITGKQN 348
           SFKNIRGTS    AVKL+CSK  PC+ VE+ DID+ Y+G  GP    CSNV P I G Q+
Sbjct: 323 SFKNIRGTSGNKDAVKLLCSKGYPCQNVEIGDIDIKYNGADGPATFHCSNVSPKILGSQS 382

[Close]

BLAST of Spg006196 vs. TAIR 10
Match: AT3G07840.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 323.2 bits (827), Expect = 2.7e-88
Identity = 169/377 (44.83%), Postives = 226/377 (59.95%), Query Frame = 0


Query: 24  DVTKYGAKPNTDITQ-------EACASTTPSKVLVPKGVYQLSQSNLKGPCKSPIEFQVE 83
           +V   G  P +DITQ        AC + T SKV++ KG ++L +  + GPCK+P+E  ++
Sbjct: 24  EVFNVGGSPGSDITQALLKAFTSACQAPTASKVVITKGEFKLGEIEMTGPCKAPVEINLQ 83

Query: 84  GTLQAPPHPT--GDGLVLLEYIDPLTLSGTGVFDGQGKAGWEKNDCHQKKICTKLPM--- 143
           GTL+A        +  V+   I+   L+G G+FDG+G A W  N+CH+   C KLP+   
Sbjct: 84  GTLKADGKAIQGKERWVVFLRINGFKLNGGGIFDGEGNAAWRVNNCHKTFECKKLPISIR 143

Query: 144 ----------DITSLDSKNFHINLLGCKNLIFQHVTITAPEDSPNTDGIHLSSSEQINIL 203
                     DI+S+D+KNFHIN+LG KN+ F +V + AP +SPNTDGIHL  SE + IL
Sbjct: 144 FDFVENAEIRDISSIDAKNFHINVLGAKNMTFDNVKVIAPAESPNTDGIHLGRSEGVKIL 203

Query: 204 DTKIATGDDCVSVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKDVVGVFVKKCKIMST 263
           ++KIATGDDC+SVGD  K + + NV CGPGHGIS+GSLG+Y  E+DV G+ V  C +  T
Sbjct: 204 NSKIATGDDCISVGDGMKNLHVENVMCGPGHGISVGSLGRYVHEQDVTGITVVNCTLQGT 263

Query: 264 TNGVRIKTWPDSAGAFSATDMHFEDI----------------------EMVASKIKISKV 323
            NG+RIKTWP +A A +A+ +HFE+I                      +   S IK+  +
Sbjct: 264 DNGLRIKTWPSAACATTASGIHFENIILNNVSNPILIDQEYCPWNQCNKQKPSTIKLVDI 323

Query: 324 SFKNIRGTSATPVAVKLVCSKSLPCEGVEVADIDLTYSGTQGPIKSQCSNVKPTITGKQN 356
           SFKNIRGTS    AVKL+CSK+ PC  VE+ +I+L Y G  GP    CSNV P + G QN
Sbjct: 324 SFKNIRGTSGNKDAVKLLCSKAHPCANVEIGNINLEYKGADGPPTFMCSNVSPKLVGTQN 383

[Close]

BLAST of Spg006196 vs. TAIR 10
Match: AT3G07830.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 316.2 bits (809), Expect = 3.3e-86
Identity = 160/373 (42.90%), Postives = 227/373 (60.86%), Query Frame = 0


Query: 24  DVTKYGAKPNTDITQ-------EACASTTPSKVLVPKGVYQLSQSNLKGPCKSPIEFQVE 83
           +V +  + P +DITQ        AC S TP KV++PKG ++L +  + GPCKSP+E  + 
Sbjct: 24  EVLRLTSSPGSDITQALLRAFTTACQSPTPRKVVIPKGQFKLGEIMMSGPCKSPVEITLL 83

Query: 84  GTLQAPPHPT--GDGLVLLEYIDPLTLSGTGVFDGQGKAGWEKNDCHQKKICTKLPM--- 143
           GT+ A  +     +  V+ + +D   L+G G FDG+G A W  N+CH+   C KLP+   
Sbjct: 84  GTVLADGNSIHGKEKWVVFQRMDGFRLNGGGTFDGEGNAAWRVNNCHKTFECKKLPISIR 143

Query: 144 ----------DITSLDSKNFHINLLGCKNLIFQHVTITAPEDSPNTDGIHLSSSEQINIL 203
                     DI+S+D+KNFHIN++G KN+ F +V I AP +SPNTDGIHL  S  ++I+
Sbjct: 144 FDFVTNAEIRDISSIDAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVGVSII 203

Query: 204 DTKIATGDDCVSVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKDVVGVFVKKCKIMST 263
           +++I+TGDDCVSVGD    + + NV CGPGHGIS+GSLG+Y  E+DV G+ V  C +  T
Sbjct: 204 NSRISTGDDCVSVGDGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVINCTLQET 263

Query: 264 TNGVRIKTWPDSAGAFSATDMHFEDI----------------------EMVASKIKISKV 323
            NG+RIKTWP +A + +A+++HFE+I                      +  +S IK++ +
Sbjct: 264 DNGLRIKTWPSAACSTTASNIHFENIILRNVSNPILIDQEYCPWNQCNKQKSSSIKLANI 323

Query: 324 SFKNIRGTSATPVAVKLVCSKSLPCEGVEVADIDLTYSGTQGPIKSQCSNVKPTITGKQN 353
           SF+ IRGTS    AVKL+CSK  PCE V+V DI++ Y+G  GP    CSNV+P + G Q 
Sbjct: 324 SFRRIRGTSGNKDAVKLLCSKGYPCENVQVGDINIQYTGADGPATFMCSNVRPKLVGTQF 383

[Close]

BLAST of Spg006196 vs. TAIR 10
Match: AT5G48140.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 312.4 bits (799), Expect = 4.7e-85
Identity = 160/358 (44.69%), Postives = 218/358 (60.89%), Query Frame = 0


Query: 32  PNTDIT-------QEACASTTPSKVLVPKGVYQLSQSNLKGPCKSPIEFQVEGTLQAPPH 91
           P +DIT        EAC   T S V++PKG Y+L +  + GPCK+PI   + GT++A  +
Sbjct: 32  PGSDITNALLKAFNEACQFPTKSTVMIPKGEYKLGEIVMMGPCKAPIRIALLGTVKADGN 91

Query: 92  PTG-DGLVLLEYIDPLTLSGTGVFDGQGKAGWEKNDCHQKKICTKLPMD----------- 151
             G +  V    I+   L+G GVFDG+G A W  N+CH+   C KLP+            
Sbjct: 92  ANGKEKWVAFRNINGFKLNGGGVFDGEGNAAWRVNNCHKTFNCKKLPISIRFDFVTDAKI 151

Query: 152 --ITSLDSKNFHINLLGCKNLIFQHVTITAPEDSPNTDGIHLSSSEQINILDTKIATGDD 211
             ITSLD+K+FHIN++G KN+ F+ V I AP +SPNTDGIH+  S+ I I+++ I+TGDD
Sbjct: 152 RGITSLDAKHFHINVIGAKNVTFEDVKIIAPAESPNTDGIHVGRSDGIKIINSFISTGDD 211

Query: 212 CVSVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKDVVGVFVKKCKIMSTTNGVRIKTW 271
           CVSVGD  K + +  VTCGPGHGISIGSLG+Y+ E++V G+ +  C +  T NG+RIKTW
Sbjct: 212 CVSVGDGMKNLLVERVTCGPGHGISIGSLGRYSHEENVSGIKIINCTLQETDNGLRIKTW 271

Query: 272 PDSAGAFSATDMHFEDI----------------------EMVASKIKISKVSFKNIRGTS 331
           P +A   +A+D+HFE+I                      +   S IK++ +SFK IRGTS
Sbjct: 272 PSAACTTTASDIHFENILLKNVSNPILIDQEYCPWNQCNKQKPSTIKLANISFKKIRGTS 331

Query: 332 ATPVAVKLVCSKSLPCEGVEVADIDLTYSGTQGPIKSQCSNVKPTITGKQNPPICAEP 347
               AVKL+CSK  PC+ VEV D+++ Y+G  GP   QCSNV P + G Q P  C+ P
Sbjct: 332 GNKDAVKLLCSKGYPCQNVEVGDVNIQYTGADGPATFQCSNVSPKLVGTQIPKACSSP 389

[Close]

BLAST of Spg006196 vs. TAIR 10
Match: AT3G14040.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 292.0 bits (746), Expect = 6.6e-79
Identity = 164/381 (43.04%), Postives = 220/381 (57.74%), Query Frame = 0


Query: 19  GQSVFDVTKYGAKPN--TDIT-------QEACASTTPSKVLVPKGVYQLSQSNLKGPCKS 78
           G +  DV   GAK +  TD +       +EACA+   S + VPKG Y +     KGPCK 
Sbjct: 67  GGASLDVKASGAKGDGKTDDSAAFAAAWKEACAA--GSTITVPKGEYLVESLEFKGPCKG 126

Query: 79  PIEFQVEGTLQAP-------PHPTGDGLVLLEYIDPLTLSGT-GVFDGQGKAGWEKNDCH 138
           P+  ++ G  +AP       PH    G +  E +   TL+G   +FDGQG   W+ NDC 
Sbjct: 127 PVTLELNGNFKAPATVKTTKPHA---GWIDFENLADFTLNGNKAIFDGQGSLAWKANDCA 186

Query: 139 QKKICTKLPMD-------------ITSLDSKNFHINLLGCKNLIFQHVTITAPEDSPNTD 198
           +   C  LP++             ITS +SK FH+N+L CKN+    + I AP +S NTD
Sbjct: 187 KTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPESLNTD 246

Query: 199 GIHLSSSEQINILDTKIATGDDCVSVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKDV 258
           GIH+  S  +N++  KI TGDDCVS+GD  + + + NV CGPGHGISIGSLG+Y  E+ V
Sbjct: 247 GIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPV 306

Query: 259 VGVFVKKCKIMSTTNGVRIKTWPDSAGAFSATDMHFEDIEM------------------- 318
            GV V+KC I +T NGVRIKTWP S     A+++ FEDI M                   
Sbjct: 307 KGVTVRKCLIKNTDNGVRIKTWPGSPPGI-ASNILFEDITMDNVSLPVLIDQEYCPYGHC 366

Query: 319 ---VASKIKISKVSFKNIRGTSATPVAVKLVCSKSLPCEGVEVADIDLTYSGTQGPIKSQ 348
              V SK+K+S V+ KNI+GTSAT VAVKL+CSK +PC  + ++DI+L ++G +GP  S 
Sbjct: 367 KAGVPSKVKLSDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSA 426

The following BLAST results are available for this feature:

BLAST of Spg006196 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031744817.1	8.8e-158	75.46	exopolygalacturonase-like [Cucumis sativus] >KAE8645715.1 hypothetical protein C...	[more]
XP_031744814.1	8.8e-158	75.46	exopolygalacturonase-like [Cucumis sativus] >XP_031744815.1 LOW QUALITY PROTEIN:...	[more]
XP_011652893.2	1.7e-156	74.80	exopolygalacturonase [Cucumis sativus] >KGN64588.2 hypothetical protein Csa_0140...	[more]
KAA0059167.1	2.4e-155	75.53	exopolygalacturonase-like [Cucumis melo var. makuwa] >KAA0059172.1 exopolygalact...	[more]
XP_011657634.1	1.5e-154	74.47	exopolygalacturonase [Cucumis sativus]	[more]

BLAST of Spg006196 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P24548	3.0e-100	53.26	Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1	[more]
Q05967	4.3e-99	50.00	Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1	[more]
Q40312	4.9e-95	46.39	Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1	[more]
Q39786	3.3e-91	46.63	Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1	[more]
Q39766	5.6e-91	46.63	Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1	[more]

BLAST of Spg006196 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D708	1.2e-155	75.53	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A6J1C2U8	3.7e-154	73.67	exopolygalacturonase-like OS=Momordica charantia OX=3673 GN=LOC111007858 PE=3 SV...	[more]
A0A5D3DYI3	1.1e-153	73.47	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5A7UTD3	2.4e-153	75.27	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A5A7TRZ0	3.1e-153	73.40	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]

BLAST of Spg006196 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07820.1	6.8e-92	45.92	Pectin lyase-like superfamily protein	[more]
AT3G07840.1	2.7e-88	44.83	Pectin lyase-like superfamily protein	[more]
AT3G07830.1	3.3e-86	42.90	Pectin lyase-like superfamily protein	[more]
AT5G48140.1	4.7e-85	44.69	Pectin lyase-like superfamily protein	[more]
AT3G14040.1	6.6e-79	43.04	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 175..196 e-value: 4300.0 score: 2.7 coord: 148..174 e-value: 130.0 score: 11.4 coord: 228..249 e-value: 280.0 score: 10.3 coord: 198..218 e-value: 3500.0 score: 3.4
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 8..348 e-value: 3.1E-83 score: 282.0
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 271..332 e-value: 8.4E-11 score: 41.5 coord: 41..269 e-value: 1.4E-63 score: 214.9
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 205..218
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 19..347
None	No IPR available	PANTHER	PTHR31375:SF248	POLYGALACTURONASE	coord: 19..347
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 20..345

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg006196.1	Spg006196.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity