Spg005971 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg005971
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	mitochondrial import inner membrane translocase subunit TIM10-like
Location	scaffold11: 1448731 .. 1453213 (+)
RNA-Seq Expression	Spg005971
Synteny	Spg005971

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCGAGGGTACTGTCAATTACCACTGAGCTAAACTTGGCAAATAGTTTTTTTTTTAATCATGTTAAATAGTTCAGGAATAAATTGAAATATAACTTAAACATAACTCAAATGGTTAAGACATTATATCATTAATCAAAATATTAGAAATTTGAATCTCAAAAAAAGATAGATGCAAATATCTCTACTATATATAGAAGAAACTTTAGGTCTCCATTTTACCCTTGAAATTTTCTTATATGACCATTTTGCCTTGACAATTTAATATTGTCCTCCTTCAATCCTTACATGTTATTGCCCTTTTACCTTTCATCTTCCTCTTTAATTGTATGTTTTCTTTGTTTCAAACTCACCTCTTCATGTATATTGATCATAAGCACAAGAACATCAACGTACTCCATTACTTAAGACCCTCTCGATGGGAAACTTTCTAGTACTACATAGTACCATACTCCCTTCATGCATATTATGACTTTGCCTTCATAAATATATCTTTAATATTTGTGGATCCCACATCTTTTTTCAGAGGATGTCGACGTGACAAATAATAAATGGAAGAAGTATCCATATTAATGGAGTATGTTGATGTTCTTCCATGTGTTTGCTTTTATACTCATAGAAATCATGTTCTCAGTAGGATGGACCAACATCCATCTTTTTTTTTTTTTTTGAGTTGAACAACATTTGGGTGAGAGATTCGAACCTCCACAACCTCTTGATCTTATCAGGTCGTCCTTTAGTAGCATGTGTGAGTTGTGACTTGGACAAAAAAAATTCAATTTCTCACCTCTTCATTTCTCTCTCCTCTTCAAGAAAAACTCTTCTAAAGTCATTCTTTTGTCAATCCTCAGACTAAATTAAACATGAATTTAAATATTCAAGATTTAGGTGGTTAGATTTGAATTTAAGATTTTTTTTAATCTCATGCTGTATTTGAATTTAAATATTCACGATGTAGGTGGTTAGAAAATTTAAATTTTAGATAGATTTCTTTTTATGTATCTAAATTTAAATATTAAGATTTAGGTGGTTAGATTTGAATTTTAAATTTGTGTTTAATCTATTTGAATTAAATATTCATGACTTCTACATTTTGTCTAGATCATTTTAGTCTATAATTTTTGTTTAAAATCTTTCTAAATTTGGCAATGGATTATTTATAAAAATTAAAAAAAAAAAAATATGAATGATTTTTTTTTTTTTTCAACTAGTACCAGCCCCCTCCGGGCTCAGTCCAAACCCAATTTCAGCTATTAACCCTAAACCCTAACTCTCATAAACATTGCTCCACCCGTCCTCCTCCTCACCTCGCCGCCTTCCGCCATCTTTGCCGCCGCCCCGAATACAGCTCCGGTCTGCAAATTACGGTACGTGATCCTTCCTCACTTTCAACTTTCTTTGAGCCATTGCATGAACTGGCTGAGGACTTTTCGCAATCAAAATCCAAAGAAAACAAGTAAAATTGGTTAAAGCCGGATCGTTTTAGGTGCGATGAAAACCGAAGGACTCGACAACCCTACACTACATTGAGTATCACTGAGTTTTGTTAAATTCTTGCCATTGCAGTGTCCAGGGATTTAGCAGCGGGGTTTTCCTTCTCCACTCGGATTCGTCGAACTCATCAAAAGACAAAGCTACGATCTTCAAATTTTGCGTTGGCAATTCATTCGATGTAAGTTTGTATGAATCGTTTTTTTCGACTAGTTCTACATAAAATTGTTCTTTTCTGGTGGGTAACTGAGTTTAGGAATTGTGGTTTTGTTTGATTCAGAGTCTCAATGGCTTCTCCGAACGATATGTCATCGGCTGTGGACAAGGAACAGGTTGGTTTCCATGTCTTTTATTCGTTTTCTTTCCATTTTTGCAAATTCGTAGCCGTGATTTGGAATTCTAGTATTTGGATTGAGTATATTGAGAGTATCCCAGATCAAGAGTGGAATCTGTGTTCTTATTCTGGTGGGTTTCTCCAAATTGGACAAATAATTTTTAGGGCACGCAGGGGGGAGAGAGAGGATAATTTTCTAATAGAATTTTCATTAATTGTATAGAAGCCTCTCATTAAGAAGCTAGTTTTCAAGCTTTAATCTGTTCTTTCATGCTTTCATCTATTCTGTTACCGAACTCTGTCCCTCTGGAGCCATGAATATGTTCCATTTATTAGCTATTGATGAATCTTTGCCATTTAGATATAACTTAAAGGCAGTCCACAATCTTTGCCATTTAGATATAAAGTTAAATTCTTTTAATCTATAACTTTATTATGGTTCAAGAAGCTAGTTTTCAAGCTTTAATCTTTTCTTTCATGCTTCAATCTATTCTGTTACCGAACTCTGTCCCTCTGGAGCCATGAATATGTTCCATTTATTAGCTTTTGATGAATCTTTCCATTTAGATATAACTTAAATGCAGTTCATAAATTCATAATTATCATCATAAATTTATTTCAATGTTTTTGCATTTGAGCGCAGATATTTGGTATGGCAGAAAAGGAGATGGAATATCGAGTTGAATTGTTCAACAAGTAGGTTTTATTACATTACTTCTTTGATTTCACCTTTTTAATAAAACTATTTGGAGAATGAGAGATACATATAAGCTCTTTCATTGAAAAAGCTTTTATTCTATAACTTTATTATGGTTCAAGATTCTATATATTTTGTTTAATTGAGATATCCGAGCTTCATTTTTCTACCTTCTTCTTAGAGTTTGACCTCTATGCCTTTGTTTTTTTTTTTTTTGTCTTTCAGGCTTACACATTCATGTTTTAACAAATGTGTTGATAAGAGGTAGGGAGTTGTCCTACGTTTTTCTATCATTGAATATTGCAACTTTTCTAATCATGGAATTTCAATTTCTTAAGGTTGGAGTTTTGGCATTATAAAACGAATTTTATCTGTCATTTTGATAGTTATGCATGGTTTTCTGTCATTTAACACTTACTATCTATTTTAGGTACAAGGAATCTGAGCTGAATATGGGTGAAAATAGTTGTATCGACCGTTGTGTTTCCAAATATTGGCATGTAAGCTGATTTTTACCTTTAACTATGCTCTTTATGCCTTATAGTTTATGCTCTTTATGCCTTTTAGTTTATGAGATATGAGTTGATCAAATAATACACGAGGACTTGTATTCCATCTGAAAAAAATTCAACTTATGTTCTTTTGTTGTGATGTGACTAAAAATACGGAGTCAAATTCACTTAGCTCATTTTAGATAACATTGCCCTTATTCTTCATATATTTCTAAATAAAATGTTCGTATTTTTGGGAAGGAAATTTAAATGATATGTTTTTATTGTCTACTTACCATCGTCACATCTAAATGATATGTTTTTATTGTCTACTTACCATCTTCACATCAATACTTGTAATTAGAAATGGCAAAACCAATTATATTCTACTTTGAGGCATGAATATGCATTTATAAATGAAACAAGGTATCTTCTGAGAAAACAGAAGCCAGTGGCAACATAATTCAGCTTAGTATGAGCCTGGATTTTCTAGGGAATTGAAACACTCTCTCATGAATTCCAGAGGATAGAAATTACATACCCACTTCATAATTTTCTTAATTTAGGATAGCTATGTCCAAGATATTTCTAACTCGAAACTCTAGACTATATAGATATAGATTAGTTGGTTTGCATCTTATTGTGAATTGACATTTCATGATTAAGGTACACATTTGATGGAACCATTACTTGACCACAGTTTTTGCAACAACTTGGAATGGTTCCTCTGGCACAATTTAACTCATTCCTCCTTAGTTTGAAAGATCATCGCTTCTTCGATTGGCTTATTTACGATGAAACAATGTCTTTGCTGCCAACTTGAGCATAGTTAAGTTAATAAAACATATATTCTCGACCTTGAATCTTGCACTGCCACATGTTGAACTTAAAAAACAATGTCTTTGCTTGAACTTGCATCATCTGTTTTTGTTGACTACTCGACTGCATCCTAGAGATGATTTTCTTTTTTGTATATAGTTATGGTATTGATTCATAGTTTGCTGTACTTCAGGTAACCAATTTAATCGGGCAGCTACTCGGCTCCGGTAGACCTCCAATGTGACTTTGATTCTTGATCTGAATAATTTGTTTGGTGAGTTGGGAAATGATAAACTTCGATTGAAGCATTTTTTCTGTCTAATTGATTCTCCATCTCACGAAATAATTTGGTTTTCCCGTCGTAGAAAGCTTTGATAATGGCACATTCTAGTCAATGTTATAGTTTTCACCATTTACTATGATTTTTATTTTCTAGAAAATATAAGGTTGGGTCTCCATTCCCTTTTTTTTTTATGCTCAAGATCATACTGGCTAATACTTTGCCACTTAAATATCTTTCTTGCCAATTCTTTAATTTTAGAGTCTGAAAAGGAAGGTTAAATAAAGTCTAGTTGTACTTTGTTACTTCAATATTTTGGTGTTTGGATTTGCATTTGCATTTATATCATTTTATTTATCCATTGTTCAGC

mRNA sequence

ATGGTCGAGGTGTCCAGGGATTTAGCAGCGGGGTTTTCCTTCTCCACTCGGATTCGTCGAACTCATCAAAAGACAAAGCTACGATCTTCAAATTTTGCGTTGGCAATTCATTCGATAGTCTCAATGGCTTCTCCGAACGATATGTCATCGGCTGTGGACAAGGAACAGATATTTGGTATGGCAGAAAAGGAGATGGAATATCGAGTTGAATTGTTCAACAAGTACAAGGAATCTGAGCTGAATATGGGTGAAAATAGTTGTATCGACCGTTGTGTTTCCAAATATTGGCATGTAACCAATTTAATCGGGCAGCTACTCGGCTCCGGTAGACCTCCAATGTGA

Coding sequence (CDS)

ATGGTCGAGGTGTCCAGGGATTTAGCAGCGGGGTTTTCCTTCTCCACTCGGATTCGTCGAACTCATCAAAAGACAAAGCTACGATCTTCAAATTTTGCGTTGGCAATTCATTCGATAGTCTCAATGGCTTCTCCGAACGATATGTCATCGGCTGTGGACAAGGAACAGATATTTGGTATGGCAGAAAAGGAGATGGAATATCGAGTTGAATTGTTCAACAAGTACAAGGAATCTGAGCTGAATATGGGTGAAAATAGTTGTATCGACCGTTGTGTTTCCAAATATTGGCATGTAACCAATTTAATCGGGCAGCTACTCGGCTCCGGTAGACCTCCAATGTGA

Protein sequence

MVEVSRDLAAGFSFSTRIRRTHQKTKLRSSNFALAIHSIVSMASPNDMSSAVDKEQIFGMAEKEMEYRVELFNKYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM

Homology

[Close]

BLAST of Spg005971 vs. NCBI nr
Match: KAG7036963.1 (Mitochondrial import inner membrane translocase subunit TIM10, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 159.5 bits (402), Expect = 1.7e-35
Identity = 90/124 (72.58%), Postives = 94/124 (75.81%), Query Frame = 0


Query: 7   DLAAGF----SFSTRIRRTHQKTKLRSSNFALAIHSIVSMASPNDMSSAVDKEQIFGMAE 66
           DLAAGF      +  IRRT  KT+L+SSNFAL  HS VSMASP    +AVDKEQIFGMAE
Sbjct: 2   DLAAGFLPPPLVTDWIRRTRFKTELQSSNFALVTHSKVSMASPTG-PTAVDKEQIFGMAE 61

Query: 67  KEMEYRVELFNK-------------YKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSG 114
           KEMEYRVELFNK             YKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSG
Sbjct: 62  KEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSG 121

[Close]

BLAST of Spg005971 vs. NCBI nr
Match: KAG6607285.1 (Mitochondrial import inner membrane translocase subunit TIM10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 156.0 bits (393), Expect = 1.9e-34
Identity = 84/109 (77.06%), Postives = 87/109 (79.82%), Query Frame = 0


Query: 18  IRRTHQKTKLRSSNFALAIHSIVSMASPNDMSSAVDKEQIFGMAEKEMEYRVELFNK--- 77
           IRRT  KT+L+SSNFAL  HS VSMASP    +AVDKEQIFGMAEKEMEYRVELFNK   
Sbjct: 20  IRRTRFKTELQSSNFALVTHSKVSMASPTG-PTAVDKEQIFGMAEKEMEYRVELFNKLTH 79

Query: 78  ----------YKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM 114
                     YKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM
Sbjct: 80  SCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM 127

[Close]

BLAST of Spg005971 vs. NCBI nr
Match: KAG6583395.1 (Mitochondrial import inner membrane translocase subunit TIM10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 146.7 bits (369), Expect = 1.2e-31
Identity = 73/99 (73.74%), Postives = 80/99 (80.81%), Query Frame = 0


Query: 28  RSSNFALAIHSIVSMASPNDMSSAVDKEQIFGMAEKEMEYRVELFNK------------- 87
           +++N    +HS +SMASPNDM SA+DKEQIFGMAEKEMEYRVELFNK             
Sbjct: 10  KATNKYQLVHSKISMASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKR 69

Query: 88  YKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM 114
           YKESELNMGENSCIDRCVSKYWHVTNL+GQLLGSGRPPM
Sbjct: 70  YKESELNMGENSCIDRCVSKYWHVTNLVGQLLGSGRPPM 108

[Close]

BLAST of Spg005971 vs. NCBI nr
Match: XP_022964898.1 (mitochondrial import inner membrane translocase subunit TIM10-like [Cucurbita moschata] >KAG7019162.1 Mitochondrial import inner membrane translocase subunit TIM10, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 139.4 bits (350), Expect = 1.9e-29
Identity = 69/85 (81.18%), Postives = 71/85 (83.53%), Query Frame = 0


Query: 42  MASPNDMSSAVDKEQIFGMAEKEMEYRVELFNK-------------YKESELNMGENSCI 101
           MASPNDM SA+DKEQIFGMAEKEMEYRVELFNK             YKESELNMGENSCI
Sbjct: 1   MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCI 60

Query: 102 DRCVSKYWHVTNLIGQLLGSGRPPM 114
           DRCVSKYWHVTNL+GQLLGSGRPPM
Sbjct: 61  DRCVSKYWHVTNLVGQLLGSGRPPM 85

[Close]

BLAST of Spg005971 vs. NCBI nr
Match: XP_022970585.1 (mitochondrial import inner membrane translocase subunit TIM10-like [Cucurbita maxima])

HSP 1 Score: 139.0 bits (349), Expect = 2.4e-29
Identity = 69/85 (81.18%), Postives = 71/85 (83.53%), Query Frame = 0


Query: 42  MASPNDMSSAVDKEQIFGMAEKEMEYRVELFNK-------------YKESELNMGENSCI 101
           MASPNDM SA+DKEQIFGMAEKEMEYRVELFNK             YKESELNMGENSCI
Sbjct: 1   MASPNDMPSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCI 60

Query: 102 DRCVSKYWHVTNLIGQLLGSGRPPM 114
           DRCVSKYWHVTNL+GQLLGSGRPPM
Sbjct: 61  DRCVSKYWHVTNLVGQLLGSGRPPM 85

[Close]

BLAST of Spg005971 vs. ExPASy Swiss-Prot
Match: Q9ZW33 (Mitochondrial import inner membrane translocase subunit TIM10 OS=Arabidopsis thaliana OX=3702 GN=TIM10 PE=1 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 2.8e-20
Identity = 51/85 (60.00%), Postives = 59/85 (69.41%), Query Frame = 0


Query: 42  MASPNDMSSAVDKEQIFGMAEKEMEYRVELFNK-------------YKESELNMGENSCI 101
           MASP  +   V KEQ F MA+ EMEYRVELFNK             YKE+ELNMGENSCI
Sbjct: 1   MASP--IPVGVTKEQAFSMAQTEMEYRVELFNKLAQTCFNKCVDKRYKEAELNMGENSCI 60

Query: 102 DRCVSKYWHVTNLIGQLLGSGRPPM 114
           DRCVSKYW V  ++GQLL +G+PP+
Sbjct: 61  DRCVSKYWQVNGMVGQLLSAGKPPV 83

[Close]

BLAST of Spg005971 vs. ExPASy Swiss-Prot
Match: Q9UTE9 (Mitochondrial import inner membrane translocase subunit tim10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=tim10 PE=3 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 4.8e-04
Identity = 24/62 (38.71%), Postives = 33/62 (53.23%), Query Frame = 0


Query: 56  QIFGMAEKEMEYRVELFN-------------KYKESELNMGENSCIDRCVSKYWHVTNLI 105
           Q   MAE+E+E   ++FN             KY E++L  GE+ CIDRCVSKY+     +
Sbjct: 16  QNIAMAEQEVEMMSDIFNRLVMTCHKKCISPKYYEADLTKGESVCIDRCVSKYFEANQSL 75

[Close]

BLAST of Spg005971 vs. ExPASy Swiss-Prot
Match: Q9W2D6 (Mitochondrial import inner membrane translocase subunit Tim10 OS=Drosophila melanogaster OX=7227 GN=Tim10 PE=3 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 8.2e-04
Identity = 26/70 (37.14%), Postives = 36/70 (51.43%), Query Frame = 0


Query: 50  SAVDKEQIFGMAEKEMEYRVELFN-------------KYKESELNMGENSCIDRCVSKYW 107
           S  D+ ++  M E E+E   +L+N             +Y ESEL  GE  CIDRCV+KY 
Sbjct: 7   STADQAKLQLMQEMEIEMMSDLYNRMTNACHKKCIPPRYSESELGKGEMVCIDRCVAKYL 66

[Close]

BLAST of Spg005971 vs. ExPASy TrEMBL
Match: A0A6J1HM98 (mitochondrial import inner membrane translocase subunit TIM10-like OS=Cucurbita moschata OX=3662 GN=LOC111464866 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 9.1e-30
Identity = 69/85 (81.18%), Postives = 71/85 (83.53%), Query Frame = 0


Query: 42  MASPNDMSSAVDKEQIFGMAEKEMEYRVELFNK-------------YKESELNMGENSCI 101
           MASPNDM SA+DKEQIFGMAEKEMEYRVELFNK             YKESELNMGENSCI
Sbjct: 1   MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCI 60

Query: 102 DRCVSKYWHVTNLIGQLLGSGRPPM 114
           DRCVSKYWHVTNL+GQLLGSGRPPM
Sbjct: 61  DRCVSKYWHVTNLVGQLLGSGRPPM 85

[Close]

BLAST of Spg005971 vs. ExPASy TrEMBL
Match: A0A6J1I395 (mitochondrial import inner membrane translocase subunit TIM10-like OS=Cucurbita maxima OX=3661 GN=LOC111469520 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.2e-29
Identity = 69/85 (81.18%), Postives = 71/85 (83.53%), Query Frame = 0


Query: 42  MASPNDMSSAVDKEQIFGMAEKEMEYRVELFNK-------------YKESELNMGENSCI 101
           MASPNDM SA+DKEQIFGMAEKEMEYRVELFNK             YKESELNMGENSCI
Sbjct: 1   MASPNDMPSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCI 60

Query: 102 DRCVSKYWHVTNLIGQLLGSGRPPM 114
           DRCVSKYWHVTNL+GQLLGSGRPPM
Sbjct: 61  DRCVSKYWHVTNLVGQLLGSGRPPM 85

[Close]

BLAST of Spg005971 vs. ExPASy TrEMBL
Match: A0A5D3BDG9 (Mitochondrial import inner membrane translocase subunit TIM10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001630 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.5e-29
Identity = 70/85 (82.35%), Postives = 71/85 (83.53%), Query Frame = 0


Query: 42  MASPNDMSSAVDKEQIFGMAEKEMEYRVELFNK-------------YKESELNMGENSCI 101
           MASPN+M SAVDKEQIFGMAEKEMEYRVELFNK             YKESELNMGENSCI
Sbjct: 1   MASPNNMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCI 60

Query: 102 DRCVSKYWHVTNLIGQLLGSGRPPM 114
           DRCVSKYWHVTNLIGQLLGSGRPPM
Sbjct: 61  DRCVSKYWHVTNLIGQLLGSGRPPM 85

[Close]

BLAST of Spg005971 vs. ExPASy TrEMBL
Match: A0A0A0LVG1 (zf-Tim10_DDP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G527890 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.5e-29
Identity = 70/85 (82.35%), Postives = 71/85 (83.53%), Query Frame = 0


Query: 42  MASPNDMSSAVDKEQIFGMAEKEMEYRVELFNK-------------YKESELNMGENSCI 101
           MASPN+M SAVDKEQIFGMAEKEMEYRVELFNK             YKESELNMGENSCI
Sbjct: 1   MASPNNMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCI 60

Query: 102 DRCVSKYWHVTNLIGQLLGSGRPPM 114
           DRCVSKYWHVTNLIGQLLGSGRPPM
Sbjct: 61  DRCVSKYWHVTNLIGQLLGSGRPPM 85

[Close]

BLAST of Spg005971 vs. ExPASy TrEMBL
Match: A0A1S3C655 (mitochondrial import inner membrane translocase subunit TIM10 OS=Cucumis melo OX=3656 GN=LOC103497109 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.5e-29
Identity = 70/85 (82.35%), Postives = 71/85 (83.53%), Query Frame = 0


Query: 42  MASPNDMSSAVDKEQIFGMAEKEMEYRVELFNK-------------YKESELNMGENSCI 101
           MASPN+M SAVDKEQIFGMAEKEMEYRVELFNK             YKESELNMGENSCI
Sbjct: 1   MASPNNMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCI 60

Query: 102 DRCVSKYWHVTNLIGQLLGSGRPPM 114
           DRCVSKYWHVTNLIGQLLGSGRPPM
Sbjct: 61  DRCVSKYWHVTNLIGQLLGSGRPPM 85

[Close]

BLAST of Spg005971 vs. TAIR 10
Match: AT2G29530.1 (Tim10/DDP family zinc finger protein )

HSP 1 Score: 99.4 bits (246), Expect = 2.0e-21
Identity = 51/85 (60.00%), Postives = 59/85 (69.41%), Query Frame = 0


Query: 42  MASPNDMSSAVDKEQIFGMAEKEMEYRVELFNK-------------YKESELNMGENSCI 101
           MASP  +   V KEQ F MA+ EMEYRVELFNK             YKE+ELNMGENSCI
Sbjct: 1   MASP--IPVGVTKEQAFSMAQTEMEYRVELFNKLAQTCFNKCVDKRYKEAELNMGENSCI 60

Query: 102 DRCVSKYWHVTNLIGQLLGSGRPPM 114
           DRCVSKYW V  ++GQLL +G+PP+
Sbjct: 61  DRCVSKYWQVNGMVGQLLSAGKPPV 83

[Close]

BLAST of Spg005971 vs. TAIR 10
Match: AT2G29530.2 (Tim10/DDP family zinc finger protein )

HSP 1 Score: 99.4 bits (246), Expect = 2.0e-21
Identity = 51/85 (60.00%), Postives = 59/85 (69.41%), Query Frame = 0


Query: 42  MASPNDMSSAVDKEQIFGMAEKEMEYRVELFNK-------------YKESELNMGENSCI 101
           MASP  +   V KEQ F MA+ EMEYRVELFNK             YKE+ELNMGENSCI
Sbjct: 1   MASP--IPVGVTKEQAFSMAQTEMEYRVELFNKLAQTCFNKCVDKRYKEAELNMGENSCI 60

Query: 102 DRCVSKYWHVTNLIGQLLGSGRPPM 114
           DRCVSKYW V  ++GQLL +G+PP+
Sbjct: 61  DRCVSKYWQVNGMVGQLLSAGKPPV 83

[Close]

BLAST of Spg005971 vs. TAIR 10
Match: AT2G29530.3 (Tim10/DDP family zinc finger protein )

HSP 1 Score: 89.0 bits (219), Expect = 2.7e-18
Identity = 50/109 (45.87%), Postives = 59/109 (54.13%), Query Frame = 0


Query: 42  MASPNDMSSAVDKEQIFGMAEKEMEYRVELFN---------------------------- 101
           MASP  +   V KEQ F MA+ EMEYRVELFN                            
Sbjct: 1   MASP--IPVGVTKEQAFSMAQTEMEYRVELFNNDIYKLEEYKFETADMSKILRLPELLAQ 60

Query: 102 ---------KYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM 114
                    +YKE+ELNMGENSCIDRCVSKYW V  ++GQLL +G+PP+
Sbjct: 61  TCFNKCVDKRYKEAELNMGENSCIDRCVSKYWQVNGMVGQLLSAGKPPV 107

The following BLAST results are available for this feature:

BLAST of Spg005971 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7036963.1	1.7e-35	72.58	Mitochondrial import inner membrane translocase subunit TIM10, partial [Cucurbit...	[more]
KAG6607285.1	1.9e-34	77.06	Mitochondrial import inner membrane translocase subunit TIM10, partial [Cucurbit...	[more]
KAG6583395.1	1.2e-31	73.74	Mitochondrial import inner membrane translocase subunit TIM10, partial [Cucurbit...	[more]
XP_022964898.1	1.9e-29	81.18	mitochondrial import inner membrane translocase subunit TIM10-like [Cucurbita mo...	[more]
XP_022970585.1	2.4e-29	81.18	mitochondrial import inner membrane translocase subunit TIM10-like [Cucurbita ma...	[more]

BLAST of Spg005971 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZW33	2.8e-20	60.00	Mitochondrial import inner membrane translocase subunit TIM10 OS=Arabidopsis tha...	[more]
Q9UTE9	4.8e-04	38.71	Mitochondrial import inner membrane translocase subunit tim10 OS=Schizosaccharom...	[more]
Q9W2D6	8.2e-04	37.14	Mitochondrial import inner membrane translocase subunit Tim10 OS=Drosophila mela...	[more]

BLAST of Spg005971 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HM98	9.1e-30	81.18	mitochondrial import inner membrane translocase subunit TIM10-like OS=Cucurbita ...	[more]
A0A6J1I395	1.2e-29	81.18	mitochondrial import inner membrane translocase subunit TIM10-like OS=Cucurbita ...	[more]
A0A5D3BDG9	1.5e-29	82.35	Mitochondrial import inner membrane translocase subunit TIM10-like OS=Cucumis me...	[more]
A0A0A0LVG1	1.5e-29	82.35	zf-Tim10_DDP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G52789...	[more]
A0A1S3C655	1.5e-29	82.35	mitochondrial import inner membrane translocase subunit TIM10 OS=Cucumis melo OX...	[more]

BLAST of Spg005971 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G29530.1	2.0e-21	60.00	Tim10/DDP family zinc finger protein	[more]
AT2G29530.2	2.0e-21	60.00	Tim10/DDP family zinc finger protein	[more]
AT2G29530.3	2.7e-18	45.87	Tim10/DDP family zinc finger protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035427	Tim10-like domain superfamily	GENE3D	1.10.287.810	Mitochondrial import inner membrane translocase subunit tim13 like domains	coord: 71..108 e-value: 9.4E-11 score: 43.1
IPR035427	Tim10-like domain superfamily	SUPERFAMILY	144122	Tim10-like	coord: 73..107
IPR004217	Tim10-like	PFAM	PF02953	zf-Tim10_DDP	coord: 73..105 e-value: 5.7E-9 score: 35.5
None	No IPR available	PANTHER	PTHR11038:SF22	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM10-LIKE	coord: 43..113
None	No IPR available	PANTHER	PTHR11038	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM10	coord: 43..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg005971.1	Spg005971.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045039	protein insertion into mitochondrial inner membrane
cellular_component	GO:0005743	mitochondrial inner membrane
molecular_function	GO:0008270	zinc ion binding