Spg005941 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg005941
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Copper transporter
Location	scaffold11: 1553719 .. 1554201 (+)
RNA-Seq Expression	Spg005941
Synteny	Spg005941

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGCCGCCGCCGACGCTCACCACCACCATATGCACGGCATGGCGCCGCCGCCGGCCTCCTCCGACGCGTCGCATGAGATGACGATGCACCACAAGATGATGATGCACATGACCTTCTTTTGGGGAACCAACGCCGAGATTCTGTTCCATCGCTGGCCTGGCGACCGCCCGAGCATGTACGCCTTGGCCTTGATCTTAGTCTTTGCGCTTGCTTTCGTCGTCGAGTGGCTTTCGAATAGCCGATTGATTAAGGAGGAATCTAGCGCCGCGGCGGCTGGATTGATCCGGACTCTGTTGCATACGGTTAGGGTTGGATTGGCCTATTTAGTGATGCTCGCGGTCATGTCGTTCAATGTTGGAGTGTTTTTGGTCGCAATCGGTGGTCATTGCCTCGGATTCTTCTTGTTTGGGAGTAGATTTTTCAAGAAATCAGGCGCGGCTTCTGGTAAATCCTCTGATCTTCCTCCTCTTAGTTGTTGA

mRNA sequence

ATGGACGCCGCCGCCGACGCTCACCACCACCATATGCACGGCATGGCGCCGCCGCCGGCCTCCTCCGACGCGTCGCATGAGATGACGATGCACCACAAGATGATGATGCACATGACCTTCTTTTGGGGAACCAACGCCGAGATTCTGTTCCATCGCTGGCCTGGCGACCGCCCGAGCATGTACGCCTTGGCCTTGATCTTAGTCTTTGCGCTTGCTTTCGTCGTCGAGTGGCTTTCGAATAGCCGATTGATTAAGGAGGAATCTAGCGCCGCGGCGGCTGGATTGATCCGGACTCTGTTGCATACGGTTAGGGTTGGATTGGCCTATTTAGTGATGCTCGCGGTCATGTCGTTCAATGTTGGAGTGTTTTTGGTCGCAATCGGTGGTCATTGCCTCGGATTCTTCTTGTTTGGGAGTAGATTTTTCAAGAAATCAGGCGCGGCTTCTGGTAAATCCTCTGATCTTCCTCCTCTTAGTTGTTGA

Coding sequence (CDS)

ATGGACGCCGCCGCCGACGCTCACCACCACCATATGCACGGCATGGCGCCGCCGCCGGCCTCCTCCGACGCGTCGCATGAGATGACGATGCACCACAAGATGATGATGCACATGACCTTCTTTTGGGGAACCAACGCCGAGATTCTGTTCCATCGCTGGCCTGGCGACCGCCCGAGCATGTACGCCTTGGCCTTGATCTTAGTCTTTGCGCTTGCTTTCGTCGTCGAGTGGCTTTCGAATAGCCGATTGATTAAGGAGGAATCTAGCGCCGCGGCGGCTGGATTGATCCGGACTCTGTTGCATACGGTTAGGGTTGGATTGGCCTATTTAGTGATGCTCGCGGTCATGTCGTTCAATGTTGGAGTGTTTTTGGTCGCAATCGGTGGTCATTGCCTCGGATTCTTCTTGTTTGGGAGTAGATTTTTCAAGAAATCAGGCGCGGCTTCTGGTAAATCCTCTGATCTTCCTCCTCTTAGTTGTTGA

Protein sequence

MDAAADAHHHHMHGMAPPPASSDASHEMTMHHKMMMHMTFFWGTNAEILFHRWPGDRPSMYALALILVFALAFVVEWLSNSRLIKEESSAAAAGLIRTLLHTVRVGLAYLVMLAVMSFNVGVFLVAIGGHCLGFFLFGSRFFKKSGAASGKSSDLPPLSC

Homology

[Close]

BLAST of Spg005941 vs. NCBI nr
Match: KAA0031770.1 (copper transporter 1 [Cucumis melo var. makuwa] >TYJ97362.1 copper transporter 1 [Cucumis melo var. makuwa])

HSP 1 Score: 269.6 bits (688), Expect = 1.7e-68
Identity = 137/160 (85.62%), Postives = 147/160 (91.88%), Query Frame = 0


Query: 1   MDAAADAHHHHMHGMAPPPASSDASHEMTMHHKMMMHMTFFWGTNAEILFHRWPGDRPSM 60
           MDAAA+AH+HHMHGM PPP SS AS EM MHHKMMMHMTFFWGTNAEILFHRWPG+R  M
Sbjct: 1   MDAAAEAHNHHMHGMTPPPDSSTASPEM-MHHKMMMHMTFFWGTNAEILFHRWPGERSGM 60

Query: 61  YALALILVFALAFVVEWLSNSRLIKEESSAAAAGLIRTLLHTVRVGLAYLVMLAVMSFNV 120
           YALALIL+F LAF+VEWL++ RLIKE+SS AAAGLIRTL+HTVRVGLAYLVMLAVMSFNV
Sbjct: 61  YALALILIFVLAFLVEWLTHCRLIKEDSSQAAAGLIRTLMHTVRVGLAYLVMLAVMSFNV 120

Query: 121 GVFLVAIGGHCLGFFLFGSRFFKKSGAASGKSSDLPPLSC 161
           GV LVAIGGHCLGFFLFGSRFFK+S A SGKSSDLPPLSC
Sbjct: 121 GVLLVAIGGHCLGFFLFGSRFFKRSEAVSGKSSDLPPLSC 159

[Close]

BLAST of Spg005941 vs. NCBI nr
Match: XP_022998909.1 (copper transporter 1-like [Cucurbita maxima])

HSP 1 Score: 248.4 bits (633), Expect = 4.1e-62
Identity = 127/149 (85.23%), Postives = 135/149 (90.60%), Query Frame = 0


Query: 1   MDAAADAHHHHMHGMAPPPASSDASHEMTMHHKMMMHMTFFWGTNAEILFHRWPGDRPSM 60
           M+A  + HHHHMHGMAPPPASS AS  MTMHH+ MMHMTFFWGTNAEILF  WPGDR  M
Sbjct: 1   MNATDETHHHHMHGMAPPPASSAASPGMTMHHR-MMHMTFFWGTNAEILFRNWPGDRSGM 60

Query: 61  YALALILVFALAFVVEWLSNSRLIKEESSAAAAGLIRTLLHTVRVGLAYLVMLAVMSFNV 120
           YALALIL+F LAF+VEWLS+SRLIKE+SSAAAAGLIRTL+HTVRVGLAYLVMLAVMSFNV
Sbjct: 61  YALALILIFVLAFIVEWLSHSRLIKEDSSAAAAGLIRTLMHTVRVGLAYLVMLAVMSFNV 120

Query: 121 GVFLVAIGGHCLGFFLFGSRFFKKSGAAS 150
           GVFLVAIGGHCLGFF FGSRFFK SGAAS
Sbjct: 121 GVFLVAIGGHCLGFFFFGSRFFKNSGAAS 148

[Close]

BLAST of Spg005941 vs. NCBI nr
Match: XP_008457427.1 (PREDICTED: copper transporter 1 [Cucumis melo])

HSP 1 Score: 246.1 bits (627), Expect = 2.0e-61
Identity = 126/149 (84.56%), Postives = 136/149 (91.28%), Query Frame = 0


Query: 1   MDAAADAHHHHMHGMAPPPASSDASHEMTMHHKMMMHMTFFWGTNAEILFHRWPGDRPSM 60
           MDAAA+AH+HHMHGM PPP SS AS EM MHHKMMMHMTFFWGTNAEILFHRWPG+R  M
Sbjct: 1   MDAAAEAHNHHMHGMTPPPDSSTASPEM-MHHKMMMHMTFFWGTNAEILFHRWPGERSGM 60

Query: 61  YALALILVFALAFVVEWLSNSRLIKEESSAAAAGLIRTLLHTVRVGLAYLVMLAVMSFNV 120
           YALALIL+F LAF+VEWL++ RLIKE+SS AAAGLIRTL+HTVRVGLAYLVMLAVMSFNV
Sbjct: 61  YALALILIFVLAFLVEWLTHCRLIKEDSSQAAAGLIRTLMHTVRVGLAYLVMLAVMSFNV 120

Query: 121 GVFLVAIGGHCLGFFLFGSRFFKKSGAAS 150
           GV LVAIGGHCLGFFLFGSRFFK+S A S
Sbjct: 121 GVLLVAIGGHCLGFFLFGSRFFKRSEAVS 148

[Close]

BLAST of Spg005941 vs. NCBI nr
Match: KAG6583399.1 (Copper transporter 6, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019163.1 Copper transporter 6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 242.3 bits (617), Expect = 2.9e-60
Identity = 129/160 (80.62%), Postives = 137/160 (85.62%), Query Frame = 0


Query: 1   MDAAADAHHHHMHGMAPPPASSDASHEMTMHHKMMMHMTFFWGTNAEILFHRWPGDRPSM 60
           MDAA +A+HHHMHGMAPP  SS AS EMT H  MM+HMTFFWG NAEILF+RWPG+R  M
Sbjct: 1   MDAADNAYHHHMHGMAPPKDSSTASPEMT-HGTMMLHMTFFWGDNAEILFNRWPGERGGM 60

Query: 61  YALALILVFALAFVVEWLSNSRLIKEESSAAAAGLIRTLLHTVRVGLAYLVMLAVMSFNV 120
           YALALI VF LA +VEWLS+SRLIKE+SSAAAA LIRTLLH VRVGL YLVMLAVMSFNV
Sbjct: 61  YALALIFVFVLALIVEWLSHSRLIKEDSSAAAARLIRTLLHRVRVGLVYLVMLAVMSFNV 120

Query: 121 GVFLVAIGGHCLGFFLFGSRFFKKSGAASGKSSDLPPLSC 161
           GVFLVAIGGHCLGF LFGSR FKKS  ASGKSS LP LSC
Sbjct: 121 GVFLVAIGGHCLGFLLFGSRLFKKSAVASGKSSVLPSLSC 159

[Close]

BLAST of Spg005941 vs. NCBI nr
Match: KAE8653274.1 (hypothetical protein Csa_023259 [Cucumis sativus])

HSP 1 Score: 241.9 bits (616), Expect = 3.8e-60
Identity = 123/149 (82.55%), Postives = 134/149 (89.93%), Query Frame = 0


Query: 1   MDAAADAHHHHMHGMAPPPASSDASHEMTMHHKMMMHMTFFWGTNAEILFHRWPGDRPSM 60
           MDAA +AH+HHMHGM PPP SS AS EM MHHKMMMHMTFFWGTNAEILFHRWPG+R  M
Sbjct: 1   MDAATEAHNHHMHGMTPPPDSSTASPEM-MHHKMMMHMTFFWGTNAEILFHRWPGERSGM 60

Query: 61  YALALILVFALAFVVEWLSNSRLIKEESSAAAAGLIRTLLHTVRVGLAYLVMLAVMSFNV 120
           YALALI +F LAF+VEWL++ RLIKE+SS AAAGLIRTL+HTVRVGLAYLVMLAVMSFNV
Sbjct: 61  YALALIFIFVLAFLVEWLTHCRLIKEDSSRAAAGLIRTLMHTVRVGLAYLVMLAVMSFNV 120

Query: 121 GVFLVAIGGHCLGFFLFGSRFFKKSGAAS 150
           GV LVAIGGHCLGFFLFGS+FFK+S A S
Sbjct: 121 GVLLVAIGGHCLGFFLFGSKFFKRSEAVS 148

[Close]

BLAST of Spg005941 vs. ExPASy Swiss-Prot
Match: Q39065 (Copper transporter 1 OS=Arabidopsis thaliana OX=3702 GN=COPT1 PE=2 SV=2)

HSP 1 Score: 155.6 bits (392), Expect = 4.7e-37
Identity = 87/167 (52.10%), Postives = 111/167 (66.47%), Query Frame = 0


Query: 9   HHHMHGMAPPPASSDASHEMTM------------HHKMMMHMTFFWGTNAEILFHRWPGD 68
           H HMHGM  P +SS +S    M            H KMMMHMTFFWG N E+LF  WPG 
Sbjct: 3   HDHMHGMPRPSSSSSSSPSSMMNNGSMNEGGGHHHMKMMMHMTFFWGKNTEVLFSGWPGT 62

Query: 69  RPSMYALALILVFALAFVVEWLSNSRLIK---EESSAAAAGLIRTLLHTVRVGLAYLVML 128
              MYAL LI VF LA + EWL++S L++    +S+  AAGLI+T ++T+R+GLAYLVML
Sbjct: 63  SSGMYALCLIFVFFLAVLTEWLAHSSLLRGSTGDSANRAAGLIQTAVYTLRIGLAYLVML 122

Query: 129 AVMSFNVGVFLVAIGGHCLGFFLFGSRFFKKSGAASGKSSDLPPLSC 161
           AVMSFN GVFLVA+ GH +GF LFGS+ F+ + +   K++ +PP  C
Sbjct: 123 AVMSFNAGVFLVALAGHAVGFMLFGSQTFRNT-SDDRKTNYVPPSGC 168

[Close]

BLAST of Spg005941 vs. ExPASy Swiss-Prot
Match: Q9STG2 (Copper transporter 2 OS=Arabidopsis thaliana OX=3702 GN=COPT2 PE=2 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 8.0e-37
Identity = 82/152 (53.95%), Postives = 102/152 (67.11%), Query Frame = 0


Query: 9   HHHMHGMAPPPASSDASHEMTMHHKMMMHMTFFWGTNAEILFHRWPGDRPSMYALALILV 68
           H HMH M PP  SS +    T  H MMMHMTFFWG N E+LF  WPG    MYAL LI++
Sbjct: 3   HDHMHDMPPPSPSSSSMSNHTTPHMMMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIVI 62

Query: 69  FALAFVVEWLSNSRLIKEESSA-AAAGLIRTLLHTVRVGLAYLVMLAVMSFNVGVFLVAI 128
           F LA + EWL++S +++   S   AAGL +T ++T++ GL+YLVMLAVMSFN GVF+VAI
Sbjct: 63  FLLAVIAEWLAHSPILRVSGSTNRAAGLAQTAVYTLKTGLSYLVMLAVMSFNAGVFIVAI 122

Query: 129 GGHCLGFFLFGSRFFKKSGAASGKSSDLPPLS 160
            G+ +GFFLFGS  FKK       +  LPP S
Sbjct: 123 AGYGVGFFLFGSTTFKKPSDDQKTAELLPPSS 154

[Close]

BLAST of Spg005941 vs. ExPASy Swiss-Prot
Match: Q8GWP3 (Copper transporter 6 OS=Arabidopsis thaliana OX=3702 GN=COPT6 PE=2 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 5.6e-30
Identity = 72/132 (54.55%), Postives = 93/132 (70.45%), Query Frame = 0


Query: 13  HGMAPPPASSDASHEMTMHHKMMMHMTFFWGTNAEILFHRWPGDRPSMYALALILVFALA 72
           HG  PP + S   +  T  + +MMHMTFFWG N EILF  WPG    MY L LI+VF LA
Sbjct: 3   HGNMPPSSPSSMVNH-TNSNMIMMHMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLA 62

Query: 73  FVVEWLSNSRLIK-EESSAAAAGLIRTLLHTVRVGLAYLVMLAVMSFNVGVFLVAIGGHC 132
            +VEWL++S +++   S++ A GL++T ++T++ GLAYLVMLAVMSFN GVF+VAI G  
Sbjct: 63  VIVEWLAHSSILRGRGSTSRAKGLVQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGFA 122

Query: 133 LGFFLFGSRFFK 144
           +GF LFGS  FK
Sbjct: 123 VGFMLFGSTAFK 133

[Close]

BLAST of Spg005941 vs. ExPASy Swiss-Prot
Match: Q94EE4 (Copper transporter 1 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT1 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.2e-27
Identity = 74/138 (53.62%), Postives = 87/138 (63.04%), Query Frame = 0


Query: 6   DAHHHHMHGMAPPPASSDASHEM-TMHHKMMMHMTFFWGTNAEILFHRWPGDRPSMYALA 65
           D   H M GM+PP A + A   M  M      HMTFFWG N+E+LF  WPG R  MYALA
Sbjct: 2   DMGGHDMGGMSPPAAGAAAQGGMGAMKSMRYTHMTFFWGKNSEVLFTMWPGTRGGMYALA 61

Query: 66  LILVFALAFVVEWLSNSR-----LIKEESSAAAAGLIRTLLHTVRVGLAYLVMLAVMSFN 125
           LI VFALA +VE+L + R           + AA GL R  +HTVRVG+AYL+MLA+MSFN
Sbjct: 62  LIFVFALAVIVEFLGSRRADACLAALARRAPAAGGLARAAVHTVRVGVAYLLMLALMSFN 121

Query: 126 VGVFLVAIGGHCLGFFLF 138
            GVFLVA+ GH  GF  F
Sbjct: 122 GGVFLVAVAGHAAGFLAF 139

[Close]

BLAST of Spg005941 vs. ExPASy Swiss-Prot
Match: Q8SAA5 (Copper transporter 4 OS=Arabidopsis thaliana OX=3702 GN=COPT4 PE=2 SV=2)

HSP 1 Score: 110.9 bits (276), Expect = 1.3e-23
Identity = 60/126 (47.62%), Postives = 81/126 (64.29%), Query Frame = 0


Query: 21  SSDASHEMTMHHKMMMHMTFFWGTNAEILFHRWPGDRPSMYALALILVFALAFVVEWL-- 80
           ++  +   T H   ++H TF+WG N ++LF  WPG    MYALALI VF LAF+ EWL  
Sbjct: 15  TTTTTQTQTPHRPSLLHPTFYWGYNCQVLFSGWPGSDRGMYALALIFVFFLAFLAEWLAR 74

Query: 81  -SNSRLIKEESSAAAAGLIRTLLHTVRVGLAYLVMLAVMSFNVGVFLVAIGGHCLGFFLF 140
            S++  IK+ +   A    RT ++TV+ G +YLV+LAV+SFN GVFL AI GH LGF +F
Sbjct: 75  CSDASSIKQGADKLAKVAFRTAMYTVKSGFSYLVILAVVSFNGGVFLAAIFGHALGFAVF 134

Query: 141 GSRFFK 144
             R F+
Sbjct: 135 RGRAFR 140

[Close]

BLAST of Spg005941 vs. ExPASy TrEMBL
Match: A0A5A7SLZ1 (Copper transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001730 PE=3 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 8.2e-69
Identity = 137/160 (85.62%), Postives = 147/160 (91.88%), Query Frame = 0


Query: 1   MDAAADAHHHHMHGMAPPPASSDASHEMTMHHKMMMHMTFFWGTNAEILFHRWPGDRPSM 60
           MDAAA+AH+HHMHGM PPP SS AS EM MHHKMMMHMTFFWGTNAEILFHRWPG+R  M
Sbjct: 1   MDAAAEAHNHHMHGMTPPPDSSTASPEM-MHHKMMMHMTFFWGTNAEILFHRWPGERSGM 60

Query: 61  YALALILVFALAFVVEWLSNSRLIKEESSAAAAGLIRTLLHTVRVGLAYLVMLAVMSFNV 120
           YALALIL+F LAF+VEWL++ RLIKE+SS AAAGLIRTL+HTVRVGLAYLVMLAVMSFNV
Sbjct: 61  YALALILIFVLAFLVEWLTHCRLIKEDSSQAAAGLIRTLMHTVRVGLAYLVMLAVMSFNV 120

Query: 121 GVFLVAIGGHCLGFFLFGSRFFKKSGAASGKSSDLPPLSC 161
           GV LVAIGGHCLGFFLFGSRFFK+S A SGKSSDLPPLSC
Sbjct: 121 GVLLVAIGGHCLGFFLFGSRFFKRSEAVSGKSSDLPPLSC 159

[Close]

BLAST of Spg005941 vs. ExPASy TrEMBL
Match: A0A6J1KFM2 (Copper transporter OS=Cucurbita maxima OX=3661 GN=LOC111493432 PE=3 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 2.0e-62
Identity = 127/149 (85.23%), Postives = 135/149 (90.60%), Query Frame = 0


Query: 1   MDAAADAHHHHMHGMAPPPASSDASHEMTMHHKMMMHMTFFWGTNAEILFHRWPGDRPSM 60
           M+A  + HHHHMHGMAPPPASS AS  MTMHH+ MMHMTFFWGTNAEILF  WPGDR  M
Sbjct: 1   MNATDETHHHHMHGMAPPPASSAASPGMTMHHR-MMHMTFFWGTNAEILFRNWPGDRSGM 60

Query: 61  YALALILVFALAFVVEWLSNSRLIKEESSAAAAGLIRTLLHTVRVGLAYLVMLAVMSFNV 120
           YALALIL+F LAF+VEWLS+SRLIKE+SSAAAAGLIRTL+HTVRVGLAYLVMLAVMSFNV
Sbjct: 61  YALALILIFVLAFIVEWLSHSRLIKEDSSAAAAGLIRTLMHTVRVGLAYLVMLAVMSFNV 120

Query: 121 GVFLVAIGGHCLGFFLFGSRFFKKSGAAS 150
           GVFLVAIGGHCLGFF FGSRFFK SGAAS
Sbjct: 121 GVFLVAIGGHCLGFFFFGSRFFKNSGAAS 148

[Close]

BLAST of Spg005941 vs. ExPASy TrEMBL
Match: A0A1S3C5M2 (Copper transporter OS=Cucumis melo OX=3656 GN=LOC103497118 PE=3 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 9.7e-62
Identity = 126/149 (84.56%), Postives = 136/149 (91.28%), Query Frame = 0


Query: 1   MDAAADAHHHHMHGMAPPPASSDASHEMTMHHKMMMHMTFFWGTNAEILFHRWPGDRPSM 60
           MDAAA+AH+HHMHGM PPP SS AS EM MHHKMMMHMTFFWGTNAEILFHRWPG+R  M
Sbjct: 1   MDAAAEAHNHHMHGMTPPPDSSTASPEM-MHHKMMMHMTFFWGTNAEILFHRWPGERSGM 60

Query: 61  YALALILVFALAFVVEWLSNSRLIKEESSAAAAGLIRTLLHTVRVGLAYLVMLAVMSFNV 120
           YALALIL+F LAF+VEWL++ RLIKE+SS AAAGLIRTL+HTVRVGLAYLVMLAVMSFNV
Sbjct: 61  YALALILIFVLAFLVEWLTHCRLIKEDSSQAAAGLIRTLMHTVRVGLAYLVMLAVMSFNV 120

Query: 121 GVFLVAIGGHCLGFFLFGSRFFKKSGAAS 150
           GV LVAIGGHCLGFFLFGSRFFK+S A S
Sbjct: 121 GVLLVAIGGHCLGFFLFGSRFFKRSEAVS 148

[Close]

BLAST of Spg005941 vs. ExPASy TrEMBL
Match: A0A0A0LVF3 (Copper transporter OS=Cucumis sativus OX=3659 GN=Csa_1G526830 PE=3 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.8e-60
Identity = 123/149 (82.55%), Postives = 134/149 (89.93%), Query Frame = 0


Query: 1   MDAAADAHHHHMHGMAPPPASSDASHEMTMHHKMMMHMTFFWGTNAEILFHRWPGDRPSM 60
           MDAA +AH+HHMHGM PPP SS AS EM MHHKMMMHMTFFWGTNAEILFHRWPG+R  M
Sbjct: 1   MDAATEAHNHHMHGMTPPPDSSTASPEM-MHHKMMMHMTFFWGTNAEILFHRWPGERSGM 60

Query: 61  YALALILVFALAFVVEWLSNSRLIKEESSAAAAGLIRTLLHTVRVGLAYLVMLAVMSFNV 120
           YALALI +F LAF+VEWL++ RLIKE+SS AAAGLIRTL+HTVRVGLAYLVMLAVMSFNV
Sbjct: 61  YALALIFIFVLAFLVEWLTHCRLIKEDSSRAAAGLIRTLMHTVRVGLAYLVMLAVMSFNV 120

Query: 121 GVFLVAIGGHCLGFFLFGSRFFKKSGAAS 150
           GV LVAIGGHCLGFFLFGS+FFK+S A S
Sbjct: 121 GVLLVAIGGHCLGFFLFGSKFFKRSEAVS 148

[Close]

BLAST of Spg005941 vs. ExPASy TrEMBL
Match: A0A6J1G9U6 (Copper transporter OS=Cucurbita moschata OX=3662 GN=LOC111452256 PE=3 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.4e-60
Identity = 123/149 (82.55%), Postives = 132/149 (88.59%), Query Frame = 0


Query: 1   MDAAADAHHHHMHGMAPPPASSDASHEMTMHHKMMMHMTFFWGTNAEILFHRWPGDRPSM 60
           MDA  + HHHHM GMAPPPASS AS  MTMHH+ MMHMTFFWGTNAEILF  WPGDR  M
Sbjct: 1   MDATDETHHHHMQGMAPPPASSAASSGMTMHHR-MMHMTFFWGTNAEILFRNWPGDRSGM 60

Query: 61  YALALILVFALAFVVEWLSNSRLIKEESSAAAAGLIRTLLHTVRVGLAYLVMLAVMSFNV 120
           YALALI +F LAF+VEWLS+SRLI+E+SS+ AAGLIRTL+HTVRVGLAYLVMLAVMSFNV
Sbjct: 61  YALALIFIFVLAFLVEWLSHSRLIREDSSSVAAGLIRTLMHTVRVGLAYLVMLAVMSFNV 120

Query: 121 GVFLVAIGGHCLGFFLFGSRFFKKSGAAS 150
           GVFLVAIGGHCLGFF FGSRFFK SGAAS
Sbjct: 121 GVFLVAIGGHCLGFFFFGSRFFKNSGAAS 148

[Close]

BLAST of Spg005941 vs. TAIR 10
Match: AT5G59030.1 (copper transporter 1 )

HSP 1 Score: 155.6 bits (392), Expect = 3.3e-38
Identity = 87/167 (52.10%), Postives = 111/167 (66.47%), Query Frame = 0


Query: 9   HHHMHGMAPPPASSDASHEMTM------------HHKMMMHMTFFWGTNAEILFHRWPGD 68
           H HMHGM  P +SS +S    M            H KMMMHMTFFWG N E+LF  WPG 
Sbjct: 3   HDHMHGMPRPSSSSSSSPSSMMNNGSMNEGGGHHHMKMMMHMTFFWGKNTEVLFSGWPGT 62

Query: 69  RPSMYALALILVFALAFVVEWLSNSRLIK---EESSAAAAGLIRTLLHTVRVGLAYLVML 128
              MYAL LI VF LA + EWL++S L++    +S+  AAGLI+T ++T+R+GLAYLVML
Sbjct: 63  SSGMYALCLIFVFFLAVLTEWLAHSSLLRGSTGDSANRAAGLIQTAVYTLRIGLAYLVML 122

Query: 129 AVMSFNVGVFLVAIGGHCLGFFLFGSRFFKKSGAASGKSSDLPPLSC 161
           AVMSFN GVFLVA+ GH +GF LFGS+ F+ + +   K++ +PP  C
Sbjct: 123 AVMSFNAGVFLVALAGHAVGFMLFGSQTFRNT-SDDRKTNYVPPSGC 168

[Close]

BLAST of Spg005941 vs. TAIR 10
Match: AT3G46900.1 (copper transporter 2 )

HSP 1 Score: 154.8 bits (390), Expect = 5.7e-38
Identity = 82/152 (53.95%), Postives = 102/152 (67.11%), Query Frame = 0


Query: 9   HHHMHGMAPPPASSDASHEMTMHHKMMMHMTFFWGTNAEILFHRWPGDRPSMYALALILV 68
           H HMH M PP  SS +    T  H MMMHMTFFWG N E+LF  WPG    MYAL LI++
Sbjct: 3   HDHMHDMPPPSPSSSSMSNHTTPHMMMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIVI 62

Query: 69  FALAFVVEWLSNSRLIKEESSA-AAAGLIRTLLHTVRVGLAYLVMLAVMSFNVGVFLVAI 128
           F LA + EWL++S +++   S   AAGL +T ++T++ GL+YLVMLAVMSFN GVF+VAI
Sbjct: 63  FLLAVIAEWLAHSPILRVSGSTNRAAGLAQTAVYTLKTGLSYLVMLAVMSFNAGVFIVAI 122

Query: 129 GGHCLGFFLFGSRFFKKSGAASGKSSDLPPLS 160
            G+ +GFFLFGS  FKK       +  LPP S
Sbjct: 123 AGYGVGFFLFGSTTFKKPSDDQKTAELLPPSS 154

[Close]

BLAST of Spg005941 vs. TAIR 10
Match: AT2G26975.1 (Ctr copper transporter family )

HSP 1 Score: 132.1 bits (331), Expect = 3.9e-31
Identity = 72/132 (54.55%), Postives = 93/132 (70.45%), Query Frame = 0


Query: 13  HGMAPPPASSDASHEMTMHHKMMMHMTFFWGTNAEILFHRWPGDRPSMYALALILVFALA 72
           HG  PP + S   +  T  + +MMHMTFFWG N EILF  WPG    MY L LI+VF LA
Sbjct: 3   HGNMPPSSPSSMVNH-TNSNMIMMHMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLA 62

Query: 73  FVVEWLSNSRLIK-EESSAAAAGLIRTLLHTVRVGLAYLVMLAVMSFNVGVFLVAIGGHC 132
            +VEWL++S +++   S++ A GL++T ++T++ GLAYLVMLAVMSFN GVF+VAI G  
Sbjct: 63  VIVEWLAHSSILRGRGSTSRAKGLVQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGFA 122

Query: 133 LGFFLFGSRFFK 144
           +GF LFGS  FK
Sbjct: 123 VGFMLFGSTAFK 133

[Close]

BLAST of Spg005941 vs. TAIR 10
Match: AT2G37925.1 (copper transporter 4 )

HSP 1 Score: 110.9 bits (276), Expect = 9.4e-25
Identity = 60/126 (47.62%), Postives = 81/126 (64.29%), Query Frame = 0


Query: 21  SSDASHEMTMHHKMMMHMTFFWGTNAEILFHRWPGDRPSMYALALILVFALAFVVEWL-- 80
           ++  +   T H   ++H TF+WG N ++LF  WPG    MYALALI VF LAF+ EWL  
Sbjct: 15  TTTTTQTQTPHRPSLLHPTFYWGYNCQVLFSGWPGSDRGMYALALIFVFFLAFLAEWLAR 74

Query: 81  -SNSRLIKEESSAAAAGLIRTLLHTVRVGLAYLVMLAVMSFNVGVFLVAIGGHCLGFFLF 140
            S++  IK+ +   A    RT ++TV+ G +YLV+LAV+SFN GVFL AI GH LGF +F
Sbjct: 75  CSDASSIKQGADKLAKVAFRTAMYTVKSGFSYLVILAVVSFNGGVFLAAIFGHALGFAVF 134

Query: 141 GSRFFK 144
             R F+
Sbjct: 135 RGRAFR 140

[Close]

BLAST of Spg005941 vs. TAIR 10
Match: AT5G59040.1 (copper transporter 3 )

HSP 1 Score: 109.8 bits (273), Expect = 2.1e-24
Identity = 64/140 (45.71%), Postives = 86/140 (61.43%), Query Frame = 0


Query: 12  MHGMAP-PPASSDASHEMTMH-HKMMMHMTFFWGTNAEILFHRWPGDRPSMYALALILVF 71
           M G +P  PA S +S     H H  MMHMTFFWG   E+LF  WPG    MY + L ++F
Sbjct: 4   MSGSSPAAPAPSPSSFFQHRHRHGGMMHMTFFWGKTTEVLFDGWPGTSLKMYWVCLAVIF 63

Query: 72  ALAFVVEWLSNSRLIKEESSAAAAGLIRTLLHTVRVGLAYLVMLAVMSFNVGVFLVAIGG 131
            ++   E LS    +K   ++   GL++T ++TVR  L+YLVMLAVMSFN GVF+ A+ G
Sbjct: 64  VISAFSECLSRCGFMKSGPASLGGGLLQTAVYTVRAALSYLVMLAVMSFNGGVFVAAMAG 123

Query: 132 HCLGFFLFGSRFFKKSGAAS 150
             LGF +FGSR F+ + + S
Sbjct: 124 FGLGFMIFGSRAFRATSSNS 143

The following BLAST results are available for this feature:

BLAST of Spg005941 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0031770.1	1.7e-68	85.63	copper transporter 1 [Cucumis melo var. makuwa] >TYJ97362.1 copper transporter 1...	[more]
XP_022998909.1	4.1e-62	85.23	copper transporter 1-like [Cucurbita maxima]	[more]
XP_008457427.1	2.0e-61	84.56	PREDICTED: copper transporter 1 [Cucumis melo]	[more]
KAG6583399.1	2.9e-60	80.63	Copper transporter 6, partial [Cucurbita argyrosperma subsp. sororia] >KAG701916...	[more]
KAE8653274.1	3.8e-60	82.55	hypothetical protein Csa_023259 [Cucumis sativus]	[more]

BLAST of Spg005941 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39065	4.7e-37	52.10	Copper transporter 1 OS=Arabidopsis thaliana OX=3702 GN=COPT1 PE=2 SV=2	[more]
Q9STG2	8.0e-37	53.95	Copper transporter 2 OS=Arabidopsis thaliana OX=3702 GN=COPT2 PE=2 SV=1	[more]
Q8GWP3	5.6e-30	54.55	Copper transporter 6 OS=Arabidopsis thaliana OX=3702 GN=COPT6 PE=2 SV=1	[more]
Q94EE4	1.2e-27	53.62	Copper transporter 1 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT1 PE=2 SV=1	[more]
Q8SAA5	1.3e-23	47.62	Copper transporter 4 OS=Arabidopsis thaliana OX=3702 GN=COPT4 PE=2 SV=2	[more]

BLAST of Spg005941 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SLZ1	8.2e-69	85.63	Copper transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G0...	[more]
A0A6J1KFM2	2.0e-62	85.23	Copper transporter OS=Cucurbita maxima OX=3661 GN=LOC111493432 PE=3 SV=1	[more]
A0A1S3C5M2	9.7e-62	84.56	Copper transporter OS=Cucumis melo OX=3656 GN=LOC103497118 PE=3 SV=1	[more]
A0A0A0LVF3	1.8e-60	82.55	Copper transporter OS=Cucumis sativus OX=3659 GN=Csa_1G526830 PE=3 SV=1	[more]
A0A6J1G9U6	2.4e-60	82.55	Copper transporter OS=Cucurbita moschata OX=3662 GN=LOC111452256 PE=3 SV=1	[more]

BLAST of Spg005941 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59030.1	3.3e-38	52.10	copper transporter 1	[more]
AT3G46900.1	5.7e-38	53.95	copper transporter 2	[more]
AT2G26975.1	3.9e-31	54.55	Ctr copper transporter family	[more]
AT2G37925.1	9.4e-25	47.62	copper transporter 4	[more]
AT5G59040.1	2.1e-24	45.71	copper transporter 3	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007274	Ctr copper transporter	PFAM	PF04145	Ctr	coord: 38..84 e-value: 1.1E-7 score: 32.6 coord: 93..137 e-value: 1.2E-11 score: 45.4
IPR007274	Ctr copper transporter	PANTHER	PTHR12483	SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS	coord: 7..159
None	No IPR available	PANTHER	PTHR12483:SF80	COPPER TRANSPORTER 6-LIKE	coord: 7..159

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg005941.1	Spg005941.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030242	autophagy of peroxisome
biological_process	GO:0006878	cellular copper ion homeostasis
biological_process	GO:0035434	copper ion transmembrane transport
biological_process	GO:0045324	late endosome to vacuole transport
biological_process	GO:0016236	macroautophagy
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0006623	protein targeting to vacuole
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005770	late endosome
cellular_component	GO:0071561	nucleus-vacuole junction
cellular_component	GO:0034271	phosphatidylinositol 3-kinase complex, class III, type I
cellular_component	GO:0034272	phosphatidylinositol 3-kinase complex, class III, type II
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0005375	copper ion transmembrane transporter activity
molecular_function	GO:0004674	protein serine/threonine kinase activity