Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACAAAACCGACTCATCTTTCATTCAAATACTGCTACTTCCAGAGCACGAAGACGATCGAAGAAGCAGATACAGAGAATCAACAGAAATGGAGAACGGTGGAAAGCCTGGGAGGAGCGACGCTCGTCTTTCCATGGAGGAAGAACGAGAGATGGAGGCCAAAACTCGAGAGTACTTCAATGGCGTCGCACCGAAGCGCCACACTAAGCCTCAGCGCAGCGAATTCTCTGCTCATTACGTCGACAAAGTAAATGGCAAGGACGATTACATTCCCGAACTCGCTGAGTTTCAGCGCCTCGAATCCGATCCACGCGAGGTTAGTTTATTTTTCGATCAATTTTCTCGATTGAGCTTTTCGTTAGTGGATCGTCGATTCGATCCTCTAGGTCTCTGAAATGCGGTTCTGATTGTGTTTGTCGAATTCGAAGTTGAATCGGTTGCTGAGTATTACAGTTAGAGAAAGGATTGAAATCAAATATCGATGCATATTGCAGAAAAATTTGTGGAGAAACTGAATTAACTGTGAATAACATGAACGTTCTCATTCTGTCGAATCCTTGATTGTTTTGAAATTTGAACAGAGACTCGCTTATGATGGCCATAACGGCAACATCTCTGAGGAATTTGTGGAGACGAAGTATTACGACGATCTCAATTGTGTAGACAAACAGCACCACACGGTACTCTCTCTAGTCTCTACCGTCCATCGATCTATGTAGCTGCCTCTTTCTGTGTCTAACGAAGAAATTGAAATTGATTTCAGACAGGAACAGGATTCATAAAAATGGAGAATGGAGATTGCAAAAGTTTCAGCCTCGCGGCAGATTCTACAACTGCCGGTTGCTGCCATGGCTCTTGTAGGGGTAATCCGGCTACCAACGAATGGATTCCGGCCAGTAATGATCTGGTAAAACCTCCTATAATTTACTTCAACTGATTGCATTTGCTTGGGTGAATTCGTACAATTTGAGCTTAATTTCAGGTTTATATATATAGGTTACTGTTACAGTAACAGATAGTATAGTTGAAATTTTAAAGACAATTTTTTTTTCTCATTTTATGTCAATGGTTTTCTACAAAGCTCATTTACTTCTGATATAGCAAACTAGCAAAGATAGGTGATGAGTTGAGTTTTTAATACTGGGTGTTTGAATTAG
mRNA sequence
ATGGAGAACGGTGGAAAGCCTGGGAGGAGCGACGCTCGTCTTTCCATGGAGGAAGAACGAGAGATGGAGGCCAAAACTCGAGAGTACTTCAATGGCGTCGCACCGAAGCGCCACACTAAGCCTCAGCGCAGCGAATTCTCTGCTCATTACGTCGACAAAGTAAATGGCAAGGACGATTACATTCCCGAACTCGCTGAGTTTCAGCGCCTCGAATCCGATCCACGCGAGAGACTCGCTTATGATGGCCATAACGGCAACATCTCTGAGGAATTTGTGGAGACGAAGTATTACGACGATCTCAATTGTGTAGACAAACAGCACCACACGACAGGAACAGGATTCATAAAAATGGAGAATGGAGATTGCAAAAGTTTCAGCCTCGCGGCAGATTCTACAACTGCCGGTTGCTGCCATGGCTCTTGTAGGGGTAATCCGGCTACCAACGAATGGATTCCGGCCAGTAATGATCTGGTAAAACCTCCTATAATTTACTTCAACTGA
Coding sequence (CDS)
ATGGAGAACGGTGGAAAGCCTGGGAGGAGCGACGCTCGTCTTTCCATGGAGGAAGAACGAGAGATGGAGGCCAAAACTCGAGAGTACTTCAATGGCGTCGCACCGAAGCGCCACACTAAGCCTCAGCGCAGCGAATTCTCTGCTCATTACGTCGACAAAGTAAATGGCAAGGACGATTACATTCCCGAACTCGCTGAGTTTCAGCGCCTCGAATCCGATCCACGCGAGAGACTCGCTTATGATGGCCATAACGGCAACATCTCTGAGGAATTTGTGGAGACGAAGTATTACGACGATCTCAATTGTGTAGACAAACAGCACCACACGACAGGAACAGGATTCATAAAAATGGAGAATGGAGATTGCAAAAGTTTCAGCCTCGCGGCAGATTCTACAACTGCCGGTTGCTGCCATGGCTCTTGTAGGGGTAATCCGGCTACCAACGAATGGATTCCGGCCAGTAATGATCTGGTAAAACCTCCTATAATTTACTTCAACTGA
Protein sequence
MENGGKPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKVNGKDDYIPELAEFQRLESDPRERLAYDGHNGNISEEFVETKYYDDLNCVDKQHHTTGTGFIKMENGDCKSFSLAADSTTAGCCHGSCRGNPATNEWIPASNDLVKPPIIYFN
Homology
BLAST of Spg005925 vs. NCBI nr
Match:
XP_038893549.1 (uncharacterized protein LOC120082446 isoform X1 [Benincasa hispida])
HSP 1 Score: 300.1 bits (767), Expect = 1.2e-77
Identity = 141/158 (89.24%), Postives = 146/158 (92.41%), Query Frame = 0
Query: 1 MENGGKPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKVNGKDDY 60
MENG +PGRSDARLSMEEEREMEAKTREYFN VAPKRHTKPQRSEFSAHYVDKVNGK+DY
Sbjct: 1 MENGRRPGRSDARLSMEEEREMEAKTREYFNSVAPKRHTKPQRSEFSAHYVDKVNGKNDY 60
Query: 61 IPELAEFQRLESDPRERLAYDGHNGNISEEFVETKYYDDLNCVDKQHHTTGTGFIKMENG 120
IPELAEFQRLESDP ERL YD NG ISEEFVETKYYDDLNC DKQHHTTGTGFIKMENG
Sbjct: 61 IPELAEFQRLESDPHERLTYDARNGKISEEFVETKYYDDLNCADKQHHTTGTGFIKMENG 120
Query: 121 DCKSFSLAADSTTAGCCHGSCRGNPATNEWIPASNDLV 159
DCK F L+ADS TAGCCHGSCRGNPA N+WIPA+NDLV
Sbjct: 121 DCKGFRLSADSATAGCCHGSCRGNPANNDWIPATNDLV 158
BLAST of Spg005925 vs. NCBI nr
Match:
XP_038893550.1 (uncharacterized protein LOC120082446 isoform X2 [Benincasa hispida])
HSP 1 Score: 298.5 bits (763), Expect = 3.5e-77
Identity = 140/157 (89.17%), Postives = 145/157 (92.36%), Query Frame = 0
Query: 1 MENGGKPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKVNGKDDY 60
MENG +PGRSDARLSMEEEREMEAKTREYFN VAPKRHTKPQRSEFSAHYVDKVNGK+DY
Sbjct: 1 MENGRRPGRSDARLSMEEEREMEAKTREYFNSVAPKRHTKPQRSEFSAHYVDKVNGKNDY 60
Query: 61 IPELAEFQRLESDPRERLAYDGHNGNISEEFVETKYYDDLNCVDKQHHTTGTGFIKMENG 120
IPELAEFQRLESDP ERL YD NG ISEEFVETKYYDDLNC DKQHHTTGTGFIKMENG
Sbjct: 61 IPELAEFQRLESDPHERLTYDARNGKISEEFVETKYYDDLNCADKQHHTTGTGFIKMENG 120
Query: 121 DCKSFSLAADSTTAGCCHGSCRGNPATNEWIPASNDL 158
DCK F L+ADS TAGCCHGSCRGNPA N+WIPA+NDL
Sbjct: 121 DCKGFRLSADSATAGCCHGSCRGNPANNDWIPATNDL 157
BLAST of Spg005925 vs. NCBI nr
Match:
XP_023522932.1 (uncharacterized protein LOC111786985 [Cucurbita pepo subsp. pepo] >XP_023525328.1 uncharacterized protein LOC111788962 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 297.0 bits (759), Expect = 1.0e-76
Identity = 145/161 (90.06%), Postives = 145/161 (90.06%), Query Frame = 0
Query: 1 MENGGKPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKVNGKDDY 60
MENG KPGRSDARLSMEEE EMEAKTREYFNGVAPKRHTKPQRSEFSAHYVD VN KDDY
Sbjct: 1 MENGQKPGRSDARLSMEEEGEMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDSVNRKDDY 60
Query: 61 IPELAEFQRLESDPRERLAYDGHNGNISEEFVETKYYDDLNCVDKQHHTTGTGFIKMENG 120
IPELA FQRLESDPRERLA DG NGNISEEFVETKYYDDLN VDKQHHTTGTGFIK ENG
Sbjct: 61 IPELAVFQRLESDPRERLACDGQNGNISEEFVETKYYDDLNYVDKQHHTTGTGFIKTENG 120
Query: 121 DCKSFSLAADSTTAGCCHGSCRGNPATNEWIPASNDLVKPP 162
DCK F LAADS TA CCH SCRGNPATNEWIPASND VK P
Sbjct: 121 DCKGFKLAADSATATCCHASCRGNPATNEWIPASNDQVKSP 161
BLAST of Spg005925 vs. NCBI nr
Match:
XP_004154227.2 (uncharacterized protein LOC101210530 isoform X2 [Cucumis sativus])
HSP 1 Score: 295.8 bits (756), Expect = 2.3e-76
Identity = 140/159 (88.05%), Postives = 145/159 (91.19%), Query Frame = 0
Query: 1 MENGGKPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKVNGKDDY 60
MEN +PGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDK N +D+Y
Sbjct: 51 MENDRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKGNDEDNY 110
Query: 61 IPELAEFQRLESDPRERLAYDGHNGNISEEFVETKYYDDLNCVDKQHHTTGTGFIKMENG 120
IPELAEFQRLESDP ERL YDG NG ISEEFVETKYYDDLNCVDKQHHTTGTGFIKMENG
Sbjct: 111 IPELAEFQRLESDPHERLTYDGRNGKISEEFVETKYYDDLNCVDKQHHTTGTGFIKMENG 170
Query: 121 DCKSFSLAADSTTAGCCHGSCRGNPATNEWIPASNDLVK 160
DCK F LA DS AGCCHGSCRGNPATN+WIPASNDL +
Sbjct: 171 DCKGFRLAPDSADAGCCHGSCRGNPATNDWIPASNDLAE 209
BLAST of Spg005925 vs. NCBI nr
Match:
XP_011658480.2 (uncharacterized protein LOC101210530 isoform X4 [Cucumis sativus] >KGN65786.1 hypothetical protein Csa_023205 [Cucumis sativus])
HSP 1 Score: 295.0 bits (754), Expect = 3.9e-76
Identity = 140/157 (89.17%), Postives = 144/157 (91.72%), Query Frame = 0
Query: 1 MENGGKPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKVNGKDDY 60
MEN +PGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDK N +D+Y
Sbjct: 51 MENDRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKGNDEDNY 110
Query: 61 IPELAEFQRLESDPRERLAYDGHNGNISEEFVETKYYDDLNCVDKQHHTTGTGFIKMENG 120
IPELAEFQRLESDP ERL YDG NG ISEEFVETKYYDDLNCVDKQHHTTGTGFIKMENG
Sbjct: 111 IPELAEFQRLESDPHERLTYDGRNGKISEEFVETKYYDDLNCVDKQHHTTGTGFIKMENG 170
Query: 121 DCKSFSLAADSTTAGCCHGSCRGNPATNEWIPASNDL 158
DCK F LA DS AGCCHGSCRGNPATN+WIPASNDL
Sbjct: 171 DCKGFRLAPDSADAGCCHGSCRGNPATNDWIPASNDL 207
BLAST of Spg005925 vs. ExPASy TrEMBL
Match:
A0A0A0M0Q2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G528510 PE=4 SV=1)
HSP 1 Score: 295.0 bits (754), Expect = 1.9e-76
Identity = 140/157 (89.17%), Postives = 144/157 (91.72%), Query Frame = 0
Query: 1 MENGGKPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKVNGKDDY 60
MEN +PGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDK N +D+Y
Sbjct: 51 MENDRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKGNDEDNY 110
Query: 61 IPELAEFQRLESDPRERLAYDGHNGNISEEFVETKYYDDLNCVDKQHHTTGTGFIKMENG 120
IPELAEFQRLESDP ERL YDG NG ISEEFVETKYYDDLNCVDKQHHTTGTGFIKMENG
Sbjct: 111 IPELAEFQRLESDPHERLTYDGRNGKISEEFVETKYYDDLNCVDKQHHTTGTGFIKMENG 170
Query: 121 DCKSFSLAADSTTAGCCHGSCRGNPATNEWIPASNDL 158
DCK F LA DS AGCCHGSCRGNPATN+WIPASNDL
Sbjct: 171 DCKGFRLAPDSADAGCCHGSCRGNPATNDWIPASNDL 207
BLAST of Spg005925 vs. ExPASy TrEMBL
Match:
A0A5D3BE87 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001400 PE=4 SV=1)
HSP 1 Score: 292.7 bits (748), Expect = 9.4e-76
Identity = 140/161 (86.96%), Postives = 145/161 (90.06%), Query Frame = 0
Query: 1 MENGGKPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKVNGKDDY 60
MEN +PGRSDARLSMEEEREMEAKTREYFNGVA KRHTKPQRSEFSAHYVDKVN +D+Y
Sbjct: 1 MENDRRPGRSDARLSMEEEREMEAKTREYFNGVATKRHTKPQRSEFSAHYVDKVNDEDNY 60
Query: 61 IPELAEFQRLESDPRERLAYDGHNGNISEEFVETKYYDDLNCVDKQHHTTGTGFIKMENG 120
IPELA+FQRLESDP ERL YDG NG ISEEFVETKYYDDLNCVDKQHHTTGTGFIKMENG
Sbjct: 61 IPELAKFQRLESDPHERLTYDGRNGKISEEFVETKYYDDLNCVDKQHHTTGTGFIKMENG 120
Query: 121 DCKSFSLAADSTTAGCCHGSCRGNPATNEWIPASNDLVKPP 162
DCK F LA DS A CCHGSCRGNPATN+WIPASND VK P
Sbjct: 121 DCKGFRLAPDSAAADCCHGSCRGNPATNDWIPASNDPVKFP 161
BLAST of Spg005925 vs. ExPASy TrEMBL
Match:
A0A5A7SMD8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold848G00400 PE=4 SV=1)
HSP 1 Score: 290.4 bits (742), Expect = 4.7e-75
Identity = 138/156 (88.46%), Postives = 142/156 (91.03%), Query Frame = 0
Query: 1 MENGGKPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKVNGKDDY 60
MEN +PGRSDARLSMEEEREMEAKTREYFNGVA KRHTKPQRSEFSAHYVDKVN +D+Y
Sbjct: 1 MENDRRPGRSDARLSMEEEREMEAKTREYFNGVATKRHTKPQRSEFSAHYVDKVNDEDNY 60
Query: 61 IPELAEFQRLESDPRERLAYDGHNGNISEEFVETKYYDDLNCVDKQHHTTGTGFIKMENG 120
IPELAEFQRLESDP ERL YDG NG ISEEFVETKYYDDLNCVDKQHHTTGTGFIKMENG
Sbjct: 61 IPELAEFQRLESDPHERLTYDGRNGKISEEFVETKYYDDLNCVDKQHHTTGTGFIKMENG 120
Query: 121 DCKSFSLAADSTTAGCCHGSCRGNPATNEWIPASND 157
DCK F LA DS A CCHGSCRGNPATN+WIPASND
Sbjct: 121 DCKGFRLAPDSAAADCCHGSCRGNPATNDWIPASND 156
BLAST of Spg005925 vs. ExPASy TrEMBL
Match:
A0A6J1GBP6 (uncharacterized protein LOC111452699 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452699 PE=4 SV=1)
HSP 1 Score: 290.4 bits (742), Expect = 4.7e-75
Identity = 143/157 (91.08%), Postives = 144/157 (91.72%), Query Frame = 0
Query: 1 MENGGKPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKVNGKDDY 60
MENG KPGRSDARLS+EEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVD VN KDDY
Sbjct: 1 MENGQKPGRSDARLSIEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDSVNRKDDY 60
Query: 61 IPELAEFQRLESDPRERLAYDGHNGNISEEFVETKYYDDLNCVDKQ-HHTTGTGFIKMEN 120
IPELA FQRLESDPRERLA DG NGNISEEFVETKYYDDLN VDKQ HHTTGTGFIKMEN
Sbjct: 61 IPELAVFQRLESDPRERLACDGQNGNISEEFVETKYYDDLNYVDKQHHHTTGTGFIKMEN 120
Query: 121 GDCKSFSLAADSTTAGCCHGSCRGNPATNEWIPASND 157
GDCK F LAADS TA CCH SCRGNPATNEWIPASND
Sbjct: 121 GDCKGFKLAADSATATCCHASCRGNPATNEWIPASND 157
BLAST of Spg005925 vs. ExPASy TrEMBL
Match:
A0A6J1GCE4 (uncharacterized protein LOC111452699 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452699 PE=4 SV=1)
HSP 1 Score: 290.4 bits (742), Expect = 4.7e-75
Identity = 143/157 (91.08%), Postives = 144/157 (91.72%), Query Frame = 0
Query: 1 MENGGKPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKVNGKDDY 60
MENG KPGRSDARLS+EEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVD VN KDDY
Sbjct: 1 MENGQKPGRSDARLSIEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDSVNRKDDY 60
Query: 61 IPELAEFQRLESDPRERLAYDGHNGNISEEFVETKYYDDLNCVDKQ-HHTTGTGFIKMEN 120
IPELA FQRLESDPRERLA DG NGNISEEFVETKYYDDLN VDKQ HHTTGTGFIKMEN
Sbjct: 61 IPELAVFQRLESDPRERLACDGQNGNISEEFVETKYYDDLNYVDKQHHHTTGTGFIKMEN 120
Query: 121 GDCKSFSLAADSTTAGCCHGSCRGNPATNEWIPASND 157
GDCK F LAADS TA CCH SCRGNPATNEWIPASND
Sbjct: 121 GDCKGFKLAADSATATCCHASCRGNPATNEWIPASND 157
BLAST of Spg005925 vs. TAIR 10
Match:
AT4G37300.1 (maternal effect embryo arrest 59 )
HSP 1 Score: 101.7 bits (252), Expect = 5.9e-22
Identity = 65/160 (40.62%), Postives = 93/160 (58.13%), Query Frame = 0
Query: 6 KPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSE------FSAHYVDKVNGKDD 65
KP RSD E++ + + R F+ +APKR TKP RSE FSA DK+
Sbjct: 5 KPSRSDEISDPEQQIKNANQIRADFDSLAPKRPTKPTRSEPGFPGSFSAS--DKITDH-- 64
Query: 66 YIPELAEFQRLESDPRERLAYDGHNGNISEEFVETKYYDDLNCVDKQHHTTGTGFI---K 125
PE +FQ L+S ++ +G + + +EF+ET+YY +L +DKQHHTTG+GFI K
Sbjct: 65 --PEADKFQSLQSQTHGKVLGEGDSSAVQDEFLETEYYSNLTAIDKQHHTTGSGFINVVK 124
Query: 126 MENGDCKSFSLAADSTTAGCCHGSCRGNPATNEWIPASND 157
+NG+ +S ++ A + G R NPATNEWIPA+ +
Sbjct: 125 EDNGE-ESEAVTAAAIGDGGEKAVYRSNPATNEWIPATEE 157
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038893549.1 | 1.2e-77 | 89.24 | uncharacterized protein LOC120082446 isoform X1 [Benincasa hispida] | [more] |
XP_038893550.1 | 3.5e-77 | 89.17 | uncharacterized protein LOC120082446 isoform X2 [Benincasa hispida] | [more] |
XP_023522932.1 | 1.0e-76 | 90.06 | uncharacterized protein LOC111786985 [Cucurbita pepo subsp. pepo] >XP_023525328.... | [more] |
XP_004154227.2 | 2.3e-76 | 88.05 | uncharacterized protein LOC101210530 isoform X2 [Cucumis sativus] | [more] |
XP_011658480.2 | 3.9e-76 | 89.17 | uncharacterized protein LOC101210530 isoform X4 [Cucumis sativus] >KGN65786.1 hy... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0M0Q2 | 1.9e-76 | 89.17 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G528510 PE=4 SV=1 | [more] |
A0A5D3BE87 | 9.4e-76 | 86.96 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7SMD8 | 4.7e-75 | 88.46 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A6J1GBP6 | 4.7e-75 | 91.08 | uncharacterized protein LOC111452699 isoform X2 OS=Cucurbita moschata OX=3662 GN... | [more] |
A0A6J1GCE4 | 4.7e-75 | 91.08 | uncharacterized protein LOC111452699 isoform X1 OS=Cucurbita moschata OX=3662 GN... | [more] |
Match Name | E-value | Identity | Description | |
AT4G37300.1 | 5.9e-22 | 40.63 | maternal effect embryo arrest 59 | [more] |