Spg005868 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg005868
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Transcription termination factor MTERF2
Location	scaffold11: 757618 .. 769262 (+)
RNA-Seq Expression	Spg005868
Synteny	Spg005868

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGAATCGGTTTGCGGCTTGCTTCGTCTCCTCATCTGATTGCAGGGTTTTACGAAGATTTTACAATGCCTTCAGTCTCAGCCCCTTCTTGCAATCTCCAGTTCTCGTAATCTCAACAATGGCGTCCCTCTTCTTCCCCATTCCAACCATCAATGGCAGCATTAAATCCTCGCCTCACGTCCCACTCAATCGCTTCACCCTTTCCCAACCTCGCTTCCTCCTTCCTCTCCATTTTCGCCCCTTCCCTTCCCGCTTTCACTTCTTCCTCTCCTCTTCCCATTTCATTCCGCTTGCCTCCACTTCCTCCGGCGCTCTTCCCTTCTCAGAGGACCCACTCGATTCTACGGCCGTAGCCCGGCTTGCTGTTTCCGAGTATCTTCAGCGTTTCGGGATTTCCGAGGAGGAATCTGTCTCCATCGCCTCCAATTCCCCTCGGTTCTTGAAGATGCTCGTTGATGGAGTTCGTGAATTGGACGAGACGTCCATGTGGATTCCTTGGAGTAAGGAAGGAGGACGACCGCCGTTGGGTGAGGGTTTTGGGTTTAAGGAAAAGGTGTCTTTGATGGCCATGGAGAAGGGTGACTGTGGGAAGGTTGCTTTCTTGGAGAGCGCCGGTATGAATCTTTCTTCAGCTATGAATGTTGCTCGCTACCTCTCTGGGGAGATGCTTCCATCTCTCGTTTATAAGGTAGGACGCTATGTTTGTTGTTTAGTGTTTTGGAACTAATGCTGGTTTATCTTCAAGTTAGCGGATGCATGAAATGAAATTAGTTTCTGATTCGAACTGCCTGAGTTCTTCTTTACTTGAGTTGATATTTGTTTGCAGTGTAGAAATAGAAGATTGATAAGCTCGCCGACGTTGGTTTATTTTTACATTTGCTCTTTAGGTAAAATATATGAAGGAACTCTTCTTTTCTGGCAGCGGTGATGGAAAACTCATAGGAAAAAGTGCTCGCCGAATGATGATGAACTTATCGATTCCTCCTGATGATGATGTGCAACAGACTTTATCCTTTTTTGAGAAGGTTTTGTAACAGTCTCTCCATACATAGTTTTTAATTTCGAAGTTCTCAATTCCAAAGTTTTAGCTTATTTTGTTTTCTTGTTTCTGTTTCCTTCGTTTTTGGAACTTTCATATTGTAAGATGTCTTTATGAATGTTATCACAGATTGAAGCCAGGCGTGGAGGCCTAGAGATGTTGAGTTCGAATGAAGACTCCTTTCGCCTTTTACTTGAATCGTTTCCCCGCATGCTTTTGTTGTCAGTAGAGTCCCACGTAAAACCAATGGTAGAATTTCTTGAAAACATTGGCATCCCTAAGGAACGCACGAGGAGCATATTTCTGTTATTTCCACCCATCATTTTCTTTGGTACTGAAGTCCTCAAATCAAGGATAATGGCTTTTGAGGAGGTATTACTGGTTACACCTTTATGTATTTATATACACGCAGGCACACACAGACATTTCAGTTTTTATACGTAATACAAAGACTGTATTTTTTGGAAATAAAGTGTCAGATTGGGTAATTAGGTTATTTTGAATCTATGGAGCACAAACACAGATACAATACGACAATGCAACATGCCAATTTCCAAAAAAGTAGGACACGACACACTGGGACACATTAATTTATTAAGTTTTTCTTGTGGGAGCTTGCCCATGGGCCATGAGAGTATCAATACTCATGATAGGTTTTAAAGCATGCTTCCGAGTTGGTCTCTCTCTCTCCAAATTGGTGCTTTGTTTGCAAGAAAGATGTGGAATCACAAAATCAGCTCTTTCTCAAATGCTGTTTTGATGAATTTTTCTTGAACAATATTATCCTTAATTTCAAATGGAAGGTAGCTCTCCCATTAATGTCAACGCCCTCCTCTCGTTGGTCAAAAGAAAGAGAAGACTCTTTGGTTGTATTTTGTTAAAGCCGTCTTTCTGTTACTATTGGCTTAGAAGGAAGAATAGAATTCAACAATGCAGAAAAGTTCAACATTTTTTTGATTCTCTTATTTTTTGTGGCTTTTTGAATGAATTTTACAATCCTTTTAACCATCGCAATGTAAGTACTCTTTGCACCACTTGGAACAACTTTCTGTAATCTTCCTTGGCTTCCTCCCCTATTTGGTAGTTTCATTTTTTTCCCAATGAATCTAATTTCTTACGAAAAAGAATGAGAATTAACTGTACAGTATGATGTTATGTTGATATTCTCTCACTATTTTCAGTTTATTGATCTTCAATTATCCTGTAGGTTGGCATAGGAGACATGGAATTTGGTAAATTATTACTTAAATATCCATGGATTGTGTCCGATTGCATCCAAGGCAACATTAAACAAATTGGTTCTTTCTTTGAATTGGAGAAGGTATACCTTCTGTCTGGTCATTTTGCCTTGCTTTTACTAATTAGATTAATTGCATGTGTTAAAATCCCCTCTCTAAATAATATTTTGAGTTGGATTGCTGCTGCCAGCTGATGTGCTAACCATTCTAAATCTCATATTCTTATTTAAAGAATGACAAGTGTATATTTTGCAAGTTGAGTGAACATAGGAAAAATTTAAAAGAAAAGGCAGAGATGGTGATTGGGCCAAAGTGCAACTTTCATTGGGAAGGCTTCAATTCTGAATCTGTTCCTTTCTTTGGGAAGGAGCTAAAGCGAAAGGGAATACCACTTGGTAAAAATTGAGCCAACATTCAACTTCCACTTGAATTTGGGGTGGTTGGTATTCAAATCTAAGGATAAGAAATTATTCTCGTCTTGCAACATGGCTATGAAAATTCCACTTTGAGAAAGAGGATTAATCAAAATTCCACTTCGAGAAAGAGGATTTATGGAGAAAAGTTACCGTGACTAAATTTTGAACCACCAATCTTGGTTCTTGGTTGGCACTTCCTTTAAACTTCCTATAGTCTTGAATAGGATTGGAGTCTTGGTAAGAAATCATAGTTCTATAAGCCCTCAGAATGATTTTTGGATTGGTAATGAACCCTTTCAAATCCTTTCCCAAGAATGTTCTCTCTTTCTAATTGGAAAAGCTCTTCTATCAAAGACATTTGGAATCCCCAGCTCAAAATTGGGACCTTGATTATTGAAGTAGTTTTATGGATATGTAATCCAAGATGTGCCTCTATCTCAAATTTGCTCCTCCATTTTGGTTCAAACTTTCTTCGTTTGTGTACGAATGGATACCCTTATCTAACAATACAAGGGTCTTCTTATGCAACTCTTCATTGAAGGATATTGCGAGCAAGGGTGTCACAAAGAAACATTTTTTATCCTCCTGGCTCAGTTGACTCTTTGGTGAAGTGAAGATGGTACACTTTTTTGGTCTATGCCCGTCTTGTCTATGTGGTTCAAGTTATCCCTTCTTATCTTGTCTTCCTTCATTTTTGTGCGGTCCATTCATAGCTTTCTTGTTTGCCTTCCATTTCCATCACCCTTTGTTTTAATTTTTGCCTTTCTAAGACTCAACTCTTAGATTTAATGCATCTCTTTGGGCATCTACTGAGGAGTTCTGTAATTATTCTTTAGGACGTATTCTTTTGGGTTAAAATCATTTTCTCTAGTCTAGTTTTTGGTTGGCCCTTTGTTGTTGGGCAGTTGTTTTGTAGGCCCTTTTGTTTTTTCCTCTTTAAAAGAATCTATCAACCTTGTTCATTTTGGTTTGGAAGGTAAACACTTTGGATTGTATTTTGAGGCATTCATCCTTTGTGGTGGGTCTGCATCAGTGCGTCATGCTTCGTAAGCTACGACTAAAGATTTGAATCATATTCTCTAGCTGTTAGTTTGCATGGTCTATTTGGGATTGTTTATTTAAGTTGTTCAATGTATGTTTGGCTTGGAATAGAGTTTGCAGCTATATCGTAGAGGAGGTTTGTCATAATTTGCCCTTTCTTGATAGGGTCCGAATTTTGTGGTTGGCTAGTTTCTTTGCATTCTTTTTGGGGCTTCTGGATTGTGAGGAATAACAGGATTTTTAAGGATTTTGATAGTTCTTGGTGTTGGAGTATTGAATTGATATAAGATTAAATTTACCATAACCCATAGCTTAAGTTTTTGGGTTCATTGTTGACTTATATAGTATTAGAGCAGGATGTCCTATGTTCAAACCCCTGTAATGTCATTTCCTCCCTAATTATTATTGATTTCCGATGTGCCTTCTACAAATTTCTAAGCCCACAAGTGATGAGTAGGGTTGAAGTATCGATGTAAGATTAAATTTATCATAGCCTACGGAAAATTTAGAATCTAAAATGATTGAAACATATAAATTTTATTTTCAAATTTTCTACTTTTTGAGTTAAAATATGTAAACTATTTTAAAAAATAAGCCTACGAAAACAGAAATTTACTAAATCCATTTTAATGTCATATATTTTGAAAACAAGAAATGACATTTGGATTGCATACCAAACGTGCCCTCTAGTTTCTTACTCAAGAAGAAATGAGGTAGCACACAGGAAGATTTATGTTGTATTTTTTTTTTCTCAATTAGCATGGTTTTGTAGTTGGCGTCCTTTAAGCTGTTGAAAATCGAAGTCGGTATTAATATGACGGTTGTGCACCTTGGTATATATATGGAAAATCTTGTTTACTAGATGATATTTCATGACAGGTACCAAATGCAAGCATTACCGATGCAATCAGAAGTTGGCCACTGATTTTAGGAAGCTCAACTAGTAAATTAAAATTGATGGTGGACAGGTTCGGTGAGCTAGGTGTTCGAAGCAAGAAGTTGGGTCAGGTGATTGCCACAAGTCCTCAGATATTACTTCAGAAACCTCGAGAATTTCTTCAGGTACGTTCCTACTATTTTGTACCATTCTTTGTTGTTTCCTATATTGCAATCAATGTCAAGATAAATTCATGAATACTTCCATTTACCCATTTACTTCGATATCCTTGAATTTTAGATACAACATTTTAGATTTAAATTGTGTATGTCAATTTATTTCTCAGCTGAATGCCATATAACTTGCCTTCTCTCTTGTTTCCTCTCATTTTTACATTTAGATTCCAACATTTTTTTTTTTTGACAAGAAACGATAATCAGAGATCTATTATCAACAAAAGGGCCAAAACAGCCTAAGGGCCGAGGGAAGAGAGATCCCTCGCCCAAGAACTACTTCAAAAGGGCTTGCCAATCGCTAATAATCATGAGCAAGCTGTAATTACAAAAAAAATTCTTATGAAGGGATATCCACCAAGAAGCCATATTTTGTACACAGTCACAAAAAGTATCAAAGCTAAAAGATTTATCCTCGAAAGTACGATTGTTTCTTTCTTTCCATAAATTCCAGAGAGTGGCCCTAAAAGCGCAGCTCGCAACCACTTTAGCCTTTTTTCTGAGGTTCCAGGCATTAAGGCCTTCAACAAGCCAGTCATCAACCCTGTTAGGAATGCAAAACGATATGCCCAATAATCTAGCAATGTAGCACCACGCCTTCCAAGCAAAGTCACAGTGAAGGAATAAATGATCTAGGCTTTCCACATTCCTCAAGCAAAGCCTACAGCCAGACGGGGACAACACCCAATTCTTGAATTTCATCTGGAGTTTGTCATCCGTGTTGAGACTTCTATACATAACAGACCACAAAAAAACCTTGATCTTCTTCGGACTTTTATGCTTCCAAATAAGATTACTAGTGGCAGGATTCACTTTTGGAGAAAATTTGGTTGAGTTTTGAAAGAGCGATTTCACCGAATACCTCCCTGATCCTTCATGGGACCAAGTAATTCTGTCCAAATCAGAGCCCAAAGTAACACTGCTGAAAATTTCAACAAGGGCCACCCAGCAGTTTAGTTCTCTGTCAAAGAGATTTCTTCTAAAATCCAAGTTCCAAGCCTGGTGTCTACTATCCCAGCAGTCAGCAATCATACAAAACTTTTTCCTAGACAGCAAGTACAAATCTGGGAATTTTTCATGAAGAGGTTGATCATCACACCATTTATCCTCCCAAAATCTAATGCTAGACCCACTTGAGGCCGAGAACTTGATGTAGTTATGAAATATAGGGTAATTTTCGGCAATGGTGACCCAAATTCTATTACCCTTTTTCCTTTTAAGATCCTTGGTCATCCAACCGTTGGAGGAAGTGCCATATATGCTAGCAATAATTTTTCGCCATAAAGCATTGTTCTCTTGGGTGAATCTCCACAGCCATTTCGTCATAAGGGAGGAGTTTCTTTGAGCCAAGGAGCCTATACCCAAGCCTCCATGGTTCGGTGGTAAAGCTGTCCACTCCCATTTAACCAAATTAGTACCACGTTTGTAACATCCTCCGTTCCACACGAAATCTCTAATCAACTTTTCCATCTTACTAGTGATAGCTTTTGGGGTTTTCATCAAGGAAAAGTGATAGATGGGTATACTATTAAGCACGGATTGAGCTAATGTGACTCTGCCCCCTTTTGAGAGAGTAAACTTCTTCCACATGTCAAGCTTTTTGTTGAACTTTTCCACCATCGGTTCCCAAAAGGATTTTCTATGAAAATTACCGCCAAGGGGGAAGCCAAGATAGTTTATAGGGAGGATATCTGAATGGCACCCGAAAGCTATAGCCCACTGAGCTAAAGTATTGTTGTCTTCATTTATTCCTATCAAGCAGGTTTTAGCCAAATTTATCACCAGACCCGAGCCTTCCATAATGAGTCTAAGAATATCCCACCATCTACTTAACTCATGCTTACAATGTGGACTGAAAATCAGAGTGTCGTCCGCATACTGAAGAAGAGAGACAACTTCTTTGTTTTTCCCCACCAGCCACCCATTCAAAATTTTCCTTTCAAGACAAAGCTGCACCGATTTGCTAATAACATCACCGACTATAGTGAAAAGGAAGGGGGAGAGCGGGTCACCTTGTCTCAACCCTCTAGAAGCAACGATCTTCCCTCTAGGTCTACCATTTATCAACACGGAGAAATTTGTGTTCCTAAGGCAACCTTTAATCCACATTCTCCATTTAGAGCCGAAACCTTTCAACTTAAGGATAGCATCTAGGAACTCCCAACTCACCATATCATAGGCCTTCTCGAGGTCAAGCTTAATCAAAACACCTTCCTCTTTTCTAGCTTTCAAATCTTCAACGGCTTTAGTAGCAATCAAAATAGCATCTAGGATTTGCCTACCATGCACAAACGCGGCTTGACAGTCACTAATGGTGTGAGGGAGCACTTTTTTTAGTCTCTCAGCTAACACTTTAGCTAGAATTTTGTAAGGGGAAGTCACGAGACTTATCGGTCTAAAATCACTGACCTTGGCAGCTTTTTTCTTCTTAGGAATCAAGCAAATATAGGTTTCATTGGTGCGCTTGTTGACTATTCCGTTTTGAAAAAATTCTTGGAACATATCTACTATGTCTTGCTTCAAAATGTTCCAGCAATTTTTAAAAAACTCACCTGTCATTCCGTCTGGGCCTGGGGATTTTAAATTCCCTAAATCTTGAACAACTTTTGAAATTTCAGCCTCACTGAATTGTTCTTCCAGTAGCTCACTGTCTTGGGTGCTGATCCTGCACCAGTCAATCCCATCTAGCACAAACTTAGGCGTAGGCCTATTTTCATATAGCTTTTTGAAAAAGCAAAGAATTTCCTCTTCAATATCAGCTTCAGAAGTGAGGATCATACCTTGATCATTTTCAATCATAGATATAAGAGCTTTGTTTTTCATACCCGTGGCCCATCTGTGGAAGAAGTTAGTATTTTCATCCCCTTCGTTAAGCCATTTGATTTTACATTTTTGACTAAGGCTTCTTTGCTCATCCACAGTCAATTGAAGCAACTCCACTTTTAAGCGTTTGCTTTCCTCAATGTCCTGGGCATTTAGGTTTCCTTGTTCCTCCTTCCGGTCAATAAAATCAATCTGGCTGAAAATCTCTCTTTTCTTACAGCCTGCCTTCAACATATTCTCCTTGTTCCAGCTTCTAATATGAGTCTTTAATCGGTTCAGCTTGATCATAACTCTGAAACCTGCCCAACCAGTCGGGTTCTCACTGTCCCACCAAGCTTCACTTTCTCTATGAATTTTGGACTGTCCAGCCATAAATTTTCAAATCTAAAAGGAGTAGGACCCCATTTAAAAGCCCCTATGGACATCATAATCGGAAAATGATCCGACGTAGGACGCTGCAATCTCTCAACTCTAATCTCTTTGAAAAGATCGTACCATTGCCTAGAGATAAAAAATCTGTCTAACTTAGAGGCCACTGCTCTTTCCCCCATTCTAGACCAAGTAAATTTACCATTCATCATCGGCATATCAATAACCTCGGCTTCATCAATAAATCTATTAAACCGCTTCATGCTACGGGAGGATGTGTTTCCATTCAATCTTTCATCCGACCATCTGATCAAATTGAAATCCCCTACCACACACCAAATGCCCTGACAAAGGCCTTGCAAATCGTACAGCTCTTGGATGAACCGCTTTCGATCTTGATAGTCACACGGGCCATAAACTACCGTGATCCAGCTATCTTGTTGCCCTTGAAGCGAGCAATGAATGGTGATGGAAAAAGCCCCCAGAAAGGAATTAATCACATCTACCAAGTTCTCTTTCCACATCACAATGACACCTCCAGCAGAGTTACAAGCAACATTAATTTACAAGCAACATTTAGATTCCAACATTAATTCGAAAATATTATATCAATGCGAAATATGATAACATTCTCTCTAGTTTTTAAAGTTTCAATTTTAGGAAAATTTGCAAAAGCTACACTTGAACTTGGGCTGTTACAACCTTATAATCATACACACTATTTGATCGATCTCCTTTCTAAATTTATGAAATCGTTGCAATTAAGCCCTTAAATATTGTGCAATGCACAAACCACCTCTAACCTAAACGTGTTGTTCCAATCAAACCCTCAAACTGTAGGGTTGTTACAATGGAACCTTGATTCTTTACCTCAATTTTCTTAAATCACGATGCCTGCTTAATGTTGATCTAGAAAATTAAACTTTTTAATAGTAAACCTTAAACCTTCTAGTTTTCAAATTTAAAGAAAAAGGATTAAATTGTAACCATTCTATAGTTTGAGGGTTGATTGTTACCGGCCTTAAAGTTCAAAGGTAGTTTGTGTATTTTGAAAAATTAATGATTTAATTGTAAAATTTTGCAAGTTAGTTAGGGTGATCGATCAAATTGAAAGTTTGAGAGTGTGATTGTAATAACTCCTAAAGTTCATGGGTAGCTTTTGAAAATTTTCCTTTATTTTTAATTGTCTGGGAGCCTCTGAAGTTTATAATTATAATGGTGCTAATACAGGTCGTTTCATATTTGGAAGAGATCGGGTTTGATAAAGAAAGTGTTGGCAGGATAATTGCTCGTTGTCCAGAAATATCTGCAACTAGTGTCGAGAAAACGCTAAAGAGGAAGCTTGAATTTCTAATCAGTATTGGCGTTTCGAAGGCTAATCTACCTCGGGCAATTAGAAAATATCCTGAGCTTCTCGTGTCTGACCCTGACCAAACTTTACTCCCGCGGTAATGCTCGAACTTTACTTTTGTTTATGTATGTGTGTGTTGTTGATGTGGTTTAATCGGTGGGCATAGTTTCCATGGATGAGGTCATAAAATTTTTTGAGAAGGGCAAAAATTCTATGCATTTTGAAAATACAACTTTATGATAAAAGTATTTTTCAAAGTAATTCTCATTTATGTATTATATCTGTTTTCTAATTAATTTTTTTTCATTGGAATTCTGGTTTGTTTTAGCATATTTGTTGTGTCTGAAAATGCTGGGTGTAACATTTAAGTAGGTTGCTCTAATTGAATCACCTTGCAATTTAGAATTTCAGTTTCACATAAAGACTTTTCTCACCTCACTATTTATAAGTATAGAAAAGAAGAAGAATCATTTATCTAATTAAAAGAAATGTAAACTTCCATACTTTTAAATTAACTTATTACACGTGTTTTAAGTCATCATTATTAAATCTCTAATTCAAAGAATTTTGTTTTAGTAAATGTAGACCCTAAATTAGTTGCATCTTATACTAAAATTACTTGATTAATTTTACGCAACAAACATGTACAAAATGATCAAATTAAGAGCTTGTTGAAGTAATTTATGATAAACTATATGATTGAAAAGTTAAGATTGTACTTAACAATAATAAATATCAATCATCATGGATTGGTGTAGTGGTCAATAAGGCCATCGGAAAACTAAAGGGTTAGGGGGAATGGATTCAATCCACGGGCCACCTACCTAGGATTTAATATCCTATGTGTTTTATGGCAACCACATGTTATAGGATCAGGCGGTTGTCTTATGAGTCTAGTTGAGGTGTTCGCGAGCTACTTCAGACACTCACGGATACCAAAAGAAACAATAATAAATATCAACTTCACTCAAACATAATTAGTAAACTCATTGTCAATCTAGTGCATGTAAAACAACCAAAGAAAAGGAAATGGACAATTTGATTAAATGTTATAATCGGAGATTAAAAATCAATAATATACCATCAAAACATATGTATTATTTTCATTTTACAAGAGGCGGCAATTATAAAATTTCATCAAGAAAATGAGGGGCAAGATAAGAAAATCATCTACGAAAAGGTGTCAATCTCAATTATAGTTTGTCTCTAAACATATATCTTGTGGCCTCATCCCTGCTTATATTATACCTATACCTATTCCTGATCCACTTTTTTCTAAGGGGGACAGGGTTTATCTTTTATGAAAGTTACAGAAGATGAAAATTTGTTATCTAAAATTATTGTGGTTGTAGTTGAAATTGTCGTGGATCTTTACACTATACATTATTCTGTTCTATGAAAGTTTTGGCCCAAATTTTAATAATGATTACGACGTTTGCAGTATTAGGTACCTGAAGCAGAGAGGGCTCTCAGAGAGGGATATTGCCTTCATGGTTGGTAGATTCTCTCCTCTACTGGGGTATAGTATAGAGGAGGTATTGAAACCCAAACTTGATTTCCTTGTAAATATCATGGAGAAGCCGATAAAGGCAGTGGTTGACTATCCAAGGTATTTTAGCTATTCGTTGGAAAAGAAGATAACTCCAAGGTTCCGGGTGTTGAAGGGGAGGAATATAGAATGTAGTTTAAAGGATATGTTGGGTAAAAATGATGAGGAGTTTGCTGTTGAGTTTATGGACAACAAAGGAACAGAATATTTAAGTTCTTCACCTACTGAAGTGTAAGAAATTTTGTCTTTAGCCATATAATTGTGTAAATAATCTTCTAGCTTTTTAGGAAACCATATTTGTAGAATATTCAGTCAAATGGCCAAATTATTTTCAAGGGGTGACTCGTCTGGATCTCTGTGGAACTTGTATCATGTGCATGGTAATGTTTTCGTTTTGGGTGTCCATTTATGAACCGTAAACACATTTGAAGTTAAGGGTGTTAAAGTTGAGCTTGTAGTTGCCTAAAGTTACAAAGATGGAGCTGCCCCTCCCCGGGGAAAGAAGCGTGGAGGTCCTTGGTGAATGCCAATTTACAAAGAAAGCAATTCAAGCTCTAGGTATGTTATCATTCATTACTAAAACTACGTCCTTGTTGATTTCAGAACTAATGGTTGAGTACAAGCAGGATTTGGTTCTTAGATCTTATATGATTGGAGACATCATATTGTTCTTTGATGTGGTAGATTTTACAGCTAAAGATGTTCTTTGA

mRNA sequence

CAGAATCGGTTTGCGGCTTGCTTCGTCTCCTCATCTGATTGCAGGGTTTTACGAAGATTTTACAATGCCTTCAGTCTCAGCCCCTTCTTGCAATCTCCAGTTCTCGTAATCTCAACAATGGCGTCCCTCTTCTTCCCCATTCCAACCATCAATGGCAGCATTAAATCCTCGCCTCACGTCCCACTCAATCGCTTCACCCTTTCCCAACCTCGCTTCCTCCTTCCTCTCCATTTTCGCCCCTTCCCTTCCCGCTTTCACTTCTTCCTCTCCTCTTCCCATTTCATTCCGCTTGCCTCCACTTCCTCCGGCGCTCTTCCCTTCTCAGAGGACCCACTCGATTCTACGGCCGTAGCCCGGCTTGCTGTTTCCGAGTATCTTCAGCGTTTCGGGATTTCCGAGGAGGAATCTGTCTCCATCGCCTCCAATTCCCCTCGGTTCTTGAAGATGCTCGTTGATGGAGTTCGTGAATTGGACGAGACGTCCATGTGGATTCCTTGGAGTAAGGAAGGAGGACGACCGCCGTTGGGTGAGGGTTTTGGGTTTAAGGAAAAGGTGTCTTTGATGGCCATGGAGAAGGGTGACTGTGGGAAGGTTGCTTTCTTGGAGAGCGCCGGTATGAATCTTTCTTCAGCTATGAATGTTGCTCGCTACCTCTCTGGGGAGATGCTTCCATCTCTCGTTTATAAGGTAAAATATATGAAGGAACTCTTCTTTTCTGGCAGCGGTGATGGAAAACTCATAGGAAAAAGTGCTCGCCGAATGATGATGAACTTATCGATTCCTCCTGATGATGATGTGCAACAGACTTTATCCTTTTTTGAGAAGATTGAAGCCAGGCGTGGAGGCCTAGAGATGTTGAGTTCGAATGAAGACTCCTTTCGCCTTTTACTTGAATCGTTTCCCCGCATGCTTTTGTTGTCAGTAGAGTCCCACGTAAAACCAATGGTAGAATTTCTTGAAAACATTGGCATCCCTAAGGAACGCACGAGGAGCATATTTCTGTTATTTCCACCCATCATTTTCTTTGGTACTGAAGTCCTCAAATCAAGGATAATGGCTTTTGAGGAGGTTGGCATAGGAGACATGGAATTTGGTAAATTATTACTTAAATATCCATGGATTGTGTCCGATTGCATCCAAGGCAACATTAAACAAATTGGTTCTTTCTTTGAATTGGAGAAGAATGACAAGTGTATATTTTGCAAGTTGAGTGAACATAGGAAAAATTTAAAAGAAAAGGCAGAGATGGTGATTGGGCCAAAGTGCAACTTTCATTGGGAAGGCTTCAATTCTGAATCTGTTCCTTTCTTTGGGAAGGAGCTAAAGCGAAAGGGAATACCACTTGGTAAACACTTTGGATTGTATTTTGAGGCATTCATCCTTTGTGGTGGGTCTGCATCAGTGCGTCATGCTTCCTATATCGTAGAGGAGGTACCAAATGCAAGCATTACCGATGCAATCAGAAGTTGGCCACTGATTTTAGGAAGCTCAACTAGTAAATTAAAATTGATGGTGGACAGGTTCGGTGAGCTAGGTGTTCGAAGCAAGAAGTTGGGTCAGGTGATTGCCACAAGTCCTCAGATATTACTTCAGAAACCTCGAGAATTTCTTCAGGTCGTTTCATATTTGGAAGAGATCGGGTTTGATAAAGAAAGTGTTGGCAGGATAATTGCTCGTTGTCCAGAAATATCTGCAACTAGTGTCGAGAAAACGCTAAAGAGGAAGCTTGAATTTCTAATCAGTATTGGCGTTTCGAAGGCTAATCTACCTCGGGCAATTAGAAAATATCCTGAGCTTCTCGTGTCTGACCCTGACCAAACTTTACTCCCGCGTATTAGGTACCTGAAGCAGAGAGGGCTCTCAGAGAGGGATATTGCCTTCATGGTTGGTAGATTCTCTCCTCTACTGGGGTATAGTATAGAGGAGGTATTGAAACCCAAACTTGATTTCCTTGTAAATATCATGGAGAAGCCGATAAAGGCAGTGGTTGACTATCCAAGGTATTTTAGCTATTCGTTGGAAAAGAAGATAACTCCAAGGTTCCGGGTGTTGAAGGGGAGGAATATAGAATGTAGTTTAAAGGATATGTTGGGTAAAAATGATGAGGAGTTTGCTGTTGAGTTTATGGACAACAAAGGAACAGAATATTTAAGTTCTTCACCTACTGAAGTTCAAATGGCCAAATTATTTTCAAGGGGTGACTCGTCTGGATCTCTGTGGAACTTGTATCATGTGCATGAACTAATGGTTGAGTACAAGCAGGATTTGGTTCTTAGATCTTATATGATTGGAGACATCATATTGTTCTTTGATGTGGTAGATTTTACAGCTAAAGATGTTCTTTGA

Coding sequence (CDS)

CAGAATCGGTTTGCGGCTTGCTTCGTCTCCTCATCTGATTGCAGGGTTTTACGAAGATTTTACAATGCCTTCAGTCTCAGCCCCTTCTTGCAATCTCCAGTTCTCGTAATCTCAACAATGGCGTCCCTCTTCTTCCCCATTCCAACCATCAATGGCAGCATTAAATCCTCGCCTCACGTCCCACTCAATCGCTTCACCCTTTCCCAACCTCGCTTCCTCCTTCCTCTCCATTTTCGCCCCTTCCCTTCCCGCTTTCACTTCTTCCTCTCCTCTTCCCATTTCATTCCGCTTGCCTCCACTTCCTCCGGCGCTCTTCCCTTCTCAGAGGACCCACTCGATTCTACGGCCGTAGCCCGGCTTGCTGTTTCCGAGTATCTTCAGCGTTTCGGGATTTCCGAGGAGGAATCTGTCTCCATCGCCTCCAATTCCCCTCGGTTCTTGAAGATGCTCGTTGATGGAGTTCGTGAATTGGACGAGACGTCCATGTGGATTCCTTGGAGTAAGGAAGGAGGACGACCGCCGTTGGGTGAGGGTTTTGGGTTTAAGGAAAAGGTGTCTTTGATGGCCATGGAGAAGGGTGACTGTGGGAAGGTTGCTTTCTTGGAGAGCGCCGGTATGAATCTTTCTTCAGCTATGAATGTTGCTCGCTACCTCTCTGGGGAGATGCTTCCATCTCTCGTTTATAAGGTAAAATATATGAAGGAACTCTTCTTTTCTGGCAGCGGTGATGGAAAACTCATAGGAAAAAGTGCTCGCCGAATGATGATGAACTTATCGATTCCTCCTGATGATGATGTGCAACAGACTTTATCCTTTTTTGAGAAGATTGAAGCCAGGCGTGGAGGCCTAGAGATGTTGAGTTCGAATGAAGACTCCTTTCGCCTTTTACTTGAATCGTTTCCCCGCATGCTTTTGTTGTCAGTAGAGTCCCACGTAAAACCAATGGTAGAATTTCTTGAAAACATTGGCATCCCTAAGGAACGCACGAGGAGCATATTTCTGTTATTTCCACCCATCATTTTCTTTGGTACTGAAGTCCTCAAATCAAGGATAATGGCTTTTGAGGAGGTTGGCATAGGAGACATGGAATTTGGTAAATTATTACTTAAATATCCATGGATTGTGTCCGATTGCATCCAAGGCAACATTAAACAAATTGGTTCTTTCTTTGAATTGGAGAAGAATGACAAGTGTATATTTTGCAAGTTGAGTGAACATAGGAAAAATTTAAAAGAAAAGGCAGAGATGGTGATTGGGCCAAAGTGCAACTTTCATTGGGAAGGCTTCAATTCTGAATCTGTTCCTTTCTTTGGGAAGGAGCTAAAGCGAAAGGGAATACCACTTGGTAAACACTTTGGATTGTATTTTGAGGCATTCATCCTTTGTGGTGGGTCTGCATCAGTGCGTCATGCTTCCTATATCGTAGAGGAGGTACCAAATGCAAGCATTACCGATGCAATCAGAAGTTGGCCACTGATTTTAGGAAGCTCAACTAGTAAATTAAAATTGATGGTGGACAGGTTCGGTGAGCTAGGTGTTCGAAGCAAGAAGTTGGGTCAGGTGATTGCCACAAGTCCTCAGATATTACTTCAGAAACCTCGAGAATTTCTTCAGGTCGTTTCATATTTGGAAGAGATCGGGTTTGATAAAGAAAGTGTTGGCAGGATAATTGCTCGTTGTCCAGAAATATCTGCAACTAGTGTCGAGAAAACGCTAAAGAGGAAGCTTGAATTTCTAATCAGTATTGGCGTTTCGAAGGCTAATCTACCTCGGGCAATTAGAAAATATCCTGAGCTTCTCGTGTCTGACCCTGACCAAACTTTACTCCCGCGTATTAGGTACCTGAAGCAGAGAGGGCTCTCAGAGAGGGATATTGCCTTCATGGTTGGTAGATTCTCTCCTCTACTGGGGTATAGTATAGAGGAGGTATTGAAACCCAAACTTGATTTCCTTGTAAATATCATGGAGAAGCCGATAAAGGCAGTGGTTGACTATCCAAGGTATTTTAGCTATTCGTTGGAAAAGAAGATAACTCCAAGGTTCCGGGTGTTGAAGGGGAGGAATATAGAATGTAGTTTAAAGGATATGTTGGGTAAAAATGATGAGGAGTTTGCTGTTGAGTTTATGGACAACAAAGGAACAGAATATTTAAGTTCTTCACCTACTGAAGTTCAAATGGCCAAATTATTTTCAAGGGGTGACTCGTCTGGATCTCTGTGGAACTTGTATCATGTGCATGAACTAATGGTTGAGTACAAGCAGGATTTGGTTCTTAGATCTTATATGATTGGAGACATCATATTGTTCTTTGATGTGGTAGATTTTACAGCTAAAGATGTTCTTTGA

Protein sequence

QNRFAACFVSSSDCRVLRRFYNAFSLSPFLQSPVLVISTMASLFFPIPTINGSIKSSPHVPLNRFTLSQPRFLLPLHFRPFPSRFHFFLSSSHFIPLASTSSGALPFSEDPLDSTAVARLAVSEYLQRFGISEEESVSIASNSPRFLKMLVDGVRELDETSMWIPWSKEGGRPPLGEGFGFKEKVSLMAMEKGDCGKVAFLESAGMNLSSAMNVARYLSGEMLPSLVYKVKYMKELFFSGSGDGKLIGKSARRMMMNLSIPPDDDVQQTLSFFEKIEARRGGLEMLSSNEDSFRLLLESFPRMLLLSVESHVKPMVEFLENIGIPKERTRSIFLLFPPIIFFGTEVLKSRIMAFEEVGIGDMEFGKLLLKYPWIVSDCIQGNIKQIGSFFELEKNDKCIFCKLSEHRKNLKEKAEMVIGPKCNFHWEGFNSESVPFFGKELKRKGIPLGKHFGLYFEAFILCGGSASVRHASYIVEEVPNASITDAIRSWPLILGSSTSKLKLMVDRFGELGVRSKKLGQVIATSPQILLQKPREFLQVVSYLEEIGFDKESVGRIIARCPEISATSVEKTLKRKLEFLISIGVSKANLPRAIRKYPELLVSDPDQTLLPRIRYLKQRGLSERDIAFMVGRFSPLLGYSIEEVLKPKLDFLVNIMEKPIKAVVDYPRYFSYSLEKKITPRFRVLKGRNIECSLKDMLGKNDEEFAVEFMDNKGTEYLSSSPTEVQMAKLFSRGDSSGSLWNLYHVHELMVEYKQDLVLRSYMIGDIILFFDVVDFTAKDVL

Homology

[Close]

BLAST of Spg005868 vs. NCBI nr
Match: XP_038895303.1 (transcription termination factor MTERF4, chloroplastic [Benincasa hispida] >XP_038895304.1 transcription termination factor MTERF4, chloroplastic [Benincasa hispida] >XP_038895305.1 transcription termination factor MTERF4, chloroplastic [Benincasa hispida])

HSP 1 Score: 946.4 bits (2445), Expect = 1.5e-271
Identity = 507/685 (74.01%), Postives = 542/685 (79.12%), Query Frame = 0


Query: 37  ISTMASLFFPIPTINGSIKSSPHVPLNRFTLSQPRFLLPLHFRPFPSRFHFFLSSSHFIP 96
           ++TMAS FFPIPTING  KSSP VPL+RF L QP    PL F PFPSRF F L+SSHF+ 
Sbjct: 1   MATMASFFFPIPTINGCTKSSPLVPLHRFNLPQPPSFFPLTFCPFPSRFPFLLTSSHFVR 60

Query: 97  LASTSSGALPFS-----EDPLDSTAVARLAVSEYLQRFGISEEESVSIASNSPRFLKMLV 156
            ASTSS ALPFS     EDPL S A ARLAVSEYLQRFG+SE+ESVSIASNSPRFLKMLV
Sbjct: 61  FASTSSDALPFSDGPPEEDPLHSLAEARLAVSEYLQRFGVSEDESVSIASNSPRFLKMLV 120

Query: 157 DGVRELDETSMWIPWSKEGGRPPLGEGFGFKEKVSLMAMEKGDCGKVAFLESAGMNLSSA 216
           DGVRELDETSMW+ WSKEGG  PL + FGFKEKV LMAMEKGD GKVAFLES GMNLSSA
Sbjct: 121 DGVRELDETSMWVSWSKEGGEQPLVDDFGFKEKVGLMAMEKGDHGKVAFLESVGMNLSSA 180

Query: 217 MNVARYLSGEMLPSLVYKVKYMKELFFSGSGDGKLIGKSARRMMMNLSIPPDDDVQQTLS 276
           MNVARYLSGEMLPSL+YKVKYMK LFFSGSGDG++IGK+ARRMM NLSIPPDDDVQQTLS
Sbjct: 181 MNVARYLSGEMLPSLIYKVKYMKGLFFSGSGDGEVIGKNARRMMTNLSIPPDDDVQQTLS 240

Query: 277 FFEKIEARRGGLEMLSSNEDSFRLLLESFPRMLLLSVESHVKPMVEFLENIGIPKERTRS 336
           FFEKIEARRGGL+ML SNE+SFRLLLESFP ML LSVESHVKP+VEFLENIGIPKERTRS
Sbjct: 241 FFEKIEARRGGLDMLCSNEESFRLLLESFPHMLFLSVESHVKPVVEFLENIGIPKERTRS 300

Query: 337 IFLLFPPIIFFGTEVLKSRIMAFEEVGIGDMEFGKLLLKYPWIVSDCIQGNIKQIGSFFE 396
           +FLLFPPIIFF TEVLKSRI+AFEEVGI     GKLLLKYPWI ++CIQGN+KQI SF E
Sbjct: 301 MFLLFPPIIFFDTEVLKSRILAFEEVGIEATTVGKLLLKYPWITANCIQGNLKQIVSFLE 360

Query: 397 LEKNDKCIFCKLSEHRKNLKEKAEMVIGPKCNFHWEGFNSESVPFFGKELKRKGIPLGKH 456
           LEK                                                         
Sbjct: 361 LEK--------------------------------------------------------- 420

Query: 457 FGLYFEAFILCGGSASVRHASYIVEEVPNASITDAIRSWPLILGSSTSKLKLMVDRFGEL 516
                                     VPNASI +AI SWPLILGSSTSKL+LMVDRFG L
Sbjct: 421 --------------------------VPNASIINAISSWPLILGSSTSKLQLMVDRFGGL 480

Query: 517 GVRSKKLGQVIATSPQILLQKPREFLQVVSYLEEIGFDKESVGRIIARCPEISATSVEKT 576
           GV+SKKLGQVIATSPQILLQKP+EFLQVVSYLEE+GFDK SVGRII RCPEISATSVEKT
Sbjct: 481 GVQSKKLGQVIATSPQILLQKPQEFLQVVSYLEELGFDKGSVGRIITRCPEISATSVEKT 540

Query: 577 LKRKLEFLISIGVSKANLPRAIRKYPELLVSDPDQTLLPRIRYLKQRGLSERDIAFMVGR 636
           LKRK+EFLISIGVSK +LPRAIRKYPELLVSDPD+TLLPRIRYL+QRG SERDIAFMVGR
Sbjct: 541 LKRKIEFLISIGVSKTHLPRAIRKYPELLVSDPDKTLLPRIRYLRQRGFSERDIAFMVGR 600

Query: 637 FSPLLGYSIEEVLKPKLDFLVNIMEKPIKAVVDYPRYFSYSLEKKITPRFRVLKGRNIEC 696
           FSP+LGYSIEEVL+PKLDFLVNIMEK IK VVDYPRYFSYSLEKKI PRFRVLKG N+EC
Sbjct: 601 FSPVLGYSIEEVLRPKLDFLVNIMEKSIKEVVDYPRYFSYSLEKKIVPRFRVLKGINVEC 602

Query: 697 SLKDMLGKNDEEFAVEFMDNKGTEY 717
           SLKDMLGKNDEEFAV+FM  KGTE+
Sbjct: 661 SLKDMLGKNDEEFAVQFMGYKGTEH 602

[Close]

BLAST of Spg005868 vs. NCBI nr
Match: KAG7037004.1 (Transcription termination factor MTERF6, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 945.3 bits (2442), Expect = 3.4e-271
Identity = 510/679 (75.11%), Postives = 544/679 (80.12%), Query Frame = 0


Query: 36  VISTMASLFFPIPTINGSIKSSPHVPLNRFTLSQPRFLLPLHFRPFPSRFHFFLSSSHFI 95
           V STMAS+FFPIPTI+ S KSS  +P+NRF+LSQPR LLPL   PF S FHF  +SS FI
Sbjct: 32  VTSTMASVFFPIPTIHRSFKSSTPIPINRFSLSQPRSLLPLDSCPFRSCFHFSSTSSRFI 91

Query: 96  PLASTSSGALPFSEDPLDSTAVARLAVSEYLQRFGISEEESVSIASNSPRFLKMLVDGVR 155
           PLASTSS   P  +D L S   ARLAVSEYLQR G+SEEESVSIASNSPRFLKMLVDGVR
Sbjct: 92  PLASTSSDVPP--DDSLHSLEEARLAVSEYLQRLGVSEEESVSIASNSPRFLKMLVDGVR 151

Query: 156 ELDETSMWIPWSKEGGRPPLGEGFGFKEKVSLMAMEKGDCGKVAFLESAGMNLSSAMNVA 215
           ELDETSMWI WS EG R P+G+GFGFKEKV+LMA EKGD GKVAFLESAGMNLSSAMNVA
Sbjct: 152 ELDETSMWISWSSEGER-PVGDGFGFKEKVALMAREKGDNGKVAFLESAGMNLSSAMNVA 211

Query: 216 RYLSGEMLPSLVYKVKYMKELFFSGSGDGKLIGKSARRMMMNLSIPPDDDVQQTLSFFEK 275
           RYLSGEMLPSL+YKVKYMKELFFSGSGDGK IGKSARRMM NLSIPPDDDVQQTLSFFEK
Sbjct: 212 RYLSGEMLPSLIYKVKYMKELFFSGSGDGKFIGKSARRMMTNLSIPPDDDVQQTLSFFEK 271

Query: 276 IEARRGGLEMLSSNEDSFRLLLESFPRMLLLSVESHVKPMVEFLENIGIPKERTRSIFLL 335
           IEARRGGL+MLSSNE+SFRLLLESFPRMLLLS++SHVKPMVEFLE IGIPKER R IFL 
Sbjct: 272 IEARRGGLDMLSSNEESFRLLLESFPRMLLLSIQSHVKPMVEFLEAIGIPKERMRGIFLS 331

Query: 336 FPPIIFFGTEVLKSRIMAFEEVGIGDMEFGKLLLKYPWIVSDCIQGNIKQIGSFFELEKN 395
           FPPIIFFGTEVLKSRIM FE+VGI +MEFGKLL KYPWI S+CIQGN+KQI SFFELEK 
Sbjct: 332 FPPIIFFGTEVLKSRIMTFEKVGIVEMEFGKLLPKYPWITSNCIQGNLKQIVSFFELEK- 391

Query: 396 DKCIFCKLSEHRKNLKEKAEMVIGPKCNFHWEGFNSESVPFFGKELKRKGIPLGKHFGLY 455
                                                                       
Sbjct: 392 ------------------------------------------------------------ 451

Query: 456 FEAFILCGGSASVRHASYIVEEVPNASITDAIRSWPLILGSSTSKLKLMVDRFGELGVRS 515
                                 VPNASITDAIRSWPLILGSS SKL+LMVD F ELGVRS
Sbjct: 452 ----------------------VPNASITDAIRSWPLILGSSASKLELMVDSFDELGVRS 511

Query: 516 KKLGQVIATSPQILLQKPREFLQVVSYLEEIGFDKESVGRIIARCPEISATSVEKTLKRK 575
           KKLGQVIATSPQ+LLQ+P+EFLQVVSYLEEIGFDKESVGRI+ARCPEI ATSVEKTL+RK
Sbjct: 512 KKLGQVIATSPQLLLQRPQEFLQVVSYLEEIGFDKESVGRILARCPEIFATSVEKTLRRK 571

Query: 576 LEFLISIGVSKANLPRAIRKYPELLVSDPDQTLLPRIRYLKQRGLSERDIAFMVGRFSPL 635
           LEFLISIGVSK +LPRAIRKYPELLVSDPD+TL PRIRYL+QRGLS+RDIAFMVGRFSPL
Sbjct: 572 LEFLISIGVSKTHLPRAIRKYPELLVSDPDRTLFPRIRYLRQRGLSKRDIAFMVGRFSPL 624

Query: 636 LGYSIEEVLKPKLDFLVNIMEKPIKAVVDYPRYFSYSLEKKITPRFRVLKGRNIECSLKD 695
           LGYSIEEVLKPKLDFLVN+MEKPIK VV+YPRYFSYSLEKKITPRFRVLK RNIEC+LKD
Sbjct: 632 LGYSIEEVLKPKLDFLVNVMEKPIKEVVEYPRYFSYSLEKKITPRFRVLKERNIECNLKD 624

Query: 696 MLGKNDEEFAVEFMDNKGT 715
           MLGKNDEEFAV FM +KGT
Sbjct: 692 MLGKNDEEFAVMFMGDKGT 624

[Close]

BLAST of Spg005868 vs. NCBI nr
Match: KAG6607327.1 (Transcription termination factor MTERF6, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 944.1 bits (2439), Expect = 7.6e-271
Identity = 508/675 (75.26%), Postives = 542/675 (80.30%), Query Frame = 0


Query: 40  MASLFFPIPTINGSIKSSPHVPLNRFTLSQPRFLLPLHFRPFPSRFHFFLSSSHFIPLAS 99
           MAS+FFPIPTI+ S KSS  +P+NRF+LSQPR LLPL   PF SRFHF  +SS FIPLAS
Sbjct: 1   MASVFFPIPTIHRSFKSSTPIPINRFSLSQPRSLLPLDSCPFRSRFHFSSTSSRFIPLAS 60

Query: 100 TSSGALPFSEDPLDSTAVARLAVSEYLQRFGISEEESVSIASNSPRFLKMLVDGVRELDE 159
           TSS   P  +D L S   ARLAVSEYLQR G+SEEESVSIASNSPRFLKMLVDGVRELDE
Sbjct: 61  TSSDVPP--DDSLHSLEEARLAVSEYLQRLGVSEEESVSIASNSPRFLKMLVDGVRELDE 120

Query: 160 TSMWIPWSKEGGRPPLGEGFGFKEKVSLMAMEKGDCGKVAFLESAGMNLSSAMNVARYLS 219
           TSMWI WS EG R P+G+GFGFKEKV+LMA EKGD GKVAFLESAGMNLSSAMNVARYLS
Sbjct: 121 TSMWISWSSEGER-PVGDGFGFKEKVALMAREKGDNGKVAFLESAGMNLSSAMNVARYLS 180

Query: 220 GEMLPSLVYKVKYMKELFFSGSGDGKLIGKSARRMMMNLSIPPDDDVQQTLSFFEKIEAR 279
           GEMLPSL+YKVKYMKELFFSGSGDGK IGKSARRMM NLSIPPDDDVQQTLSFFEKIEAR
Sbjct: 181 GEMLPSLIYKVKYMKELFFSGSGDGKFIGKSARRMMTNLSIPPDDDVQQTLSFFEKIEAR 240

Query: 280 RGGLEMLSSNEDSFRLLLESFPRMLLLSVESHVKPMVEFLENIGIPKERTRSIFLLFPPI 339
           RGGL+MLSSNE+SFRLLLESFPRMLLLS++SHVKPMVEFLE IGIPKER R IFL FPPI
Sbjct: 241 RGGLDMLSSNEESFRLLLESFPRMLLLSIQSHVKPMVEFLEAIGIPKERMRGIFLSFPPI 300

Query: 340 IFFGTEVLKSRIMAFEEVGIGDMEFGKLLLKYPWIVSDCIQGNIKQIGSFFELEKNDKCI 399
           IFFGTEVLKSRIM FE+VGI +MEFGKLL KYPWI S+CIQGN+KQI SFFELEK     
Sbjct: 301 IFFGTEVLKSRIMTFEKVGIVEMEFGKLLPKYPWITSNCIQGNLKQIVSFFELEK----- 360

Query: 400 FCKLSEHRKNLKEKAEMVIGPKCNFHWEGFNSESVPFFGKELKRKGIPLGKHFGLYFEAF 459
                                                                       
Sbjct: 361 ------------------------------------------------------------ 420

Query: 460 ILCGGSASVRHASYIVEEVPNASITDAIRSWPLILGSSTSKLKLMVDRFGELGVRSKKLG 519
                             VPNASITDAIRSWPLILGSS SKL+LMVD F ELGVRSKKLG
Sbjct: 421 ------------------VPNASITDAIRSWPLILGSSASKLELMVDSFDELGVRSKKLG 480

Query: 520 QVIATSPQILLQKPREFLQVVSYLEEIGFDKESVGRIIARCPEISATSVEKTLKRKLEFL 579
           QVIATSPQ+LLQ+P+EFLQVVSYLEEIGFDKESVGRI+ARCPEI ATSVEKTL+RKLEFL
Sbjct: 481 QVIATSPQLLLQRPQEFLQVVSYLEEIGFDKESVGRILARCPEIFATSVEKTLRRKLEFL 540

Query: 580 ISIGVSKANLPRAIRKYPELLVSDPDQTLLPRIRYLKQRGLSERDIAFMVGRFSPLLGYS 639
           ISIGVSK +LPRAIRKYPELLVSDPD+TL PRIRYL+QRGLS+RDIAFMVGRFSPLLGYS
Sbjct: 541 ISIGVSKTHLPRAIRKYPELLVSDPDRTLFPRIRYLRQRGLSKRDIAFMVGRFSPLLGYS 589

Query: 640 IEEVLKPKLDFLVNIMEKPIKAVVDYPRYFSYSLEKKITPRFRVLKGRNIECSLKDMLGK 699
           IEEVLKPKLDFLVN+MEKPIK VV+YPRYFSYSLEKKITPRFRVLK RNIEC+LKDMLGK
Sbjct: 601 IEEVLKPKLDFLVNVMEKPIKEVVEYPRYFSYSLEKKITPRFRVLKERNIECNLKDMLGK 589

Query: 700 NDEEFAVEFMDNKGT 715
           NDEEFAV FM +KGT
Sbjct: 661 NDEEFAVMFMGDKGT 589

[Close]

BLAST of Spg005868 vs. NCBI nr
Match: XP_023521598.1 (transcription termination factor MTERF2, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023521599.1 transcription termination factor MTERF2, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023522938.1 transcription termination factor MTERF2, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 942.2 bits (2434), Expect = 2.9e-270
Identity = 507/675 (75.11%), Postives = 542/675 (80.30%), Query Frame = 0


Query: 40  MASLFFPIPTINGSIKSSPHVPLNRFTLSQPRFLLPLHFRPFPSRFHFFLSSSHFIPLAS 99
           MAS+FFPIPTI+ S +SS  +P+NRF+LSQPR LLPL   PF SRFHF  +SS FIPLAS
Sbjct: 1   MASVFFPIPTIHRSFESSTPIPINRFSLSQPRSLLPLDSCPFRSRFHFSPTSSRFIPLAS 60

Query: 100 TSSGALPFSEDPLDSTAVARLAVSEYLQRFGISEEESVSIASNSPRFLKMLVDGVRELDE 159
           TSS   P  +D L S   ARLAVSEYLQR G+SEEESVSIASNSPRFLKMLVDGVRELDE
Sbjct: 61  TSSDVPP--DDSLHSLEEARLAVSEYLQRLGVSEEESVSIASNSPRFLKMLVDGVRELDE 120

Query: 160 TSMWIPWSKEGGRPPLGEGFGFKEKVSLMAMEKGDCGKVAFLESAGMNLSSAMNVARYLS 219
           TSMWI WS EG R P+G+GFGFKEKV+LMA EKGD GKVAFLESAGMNLSSAMNVARYLS
Sbjct: 121 TSMWISWSSEGER-PVGDGFGFKEKVALMAREKGDNGKVAFLESAGMNLSSAMNVARYLS 180

Query: 220 GEMLPSLVYKVKYMKELFFSGSGDGKLIGKSARRMMMNLSIPPDDDVQQTLSFFEKIEAR 279
           GEMLPSL+YKVKYMKELFFSGSGDGK IGKSARRMM NLSIPPDDDVQQTLSFFEKIEAR
Sbjct: 181 GEMLPSLIYKVKYMKELFFSGSGDGKFIGKSARRMMTNLSIPPDDDVQQTLSFFEKIEAR 240

Query: 280 RGGLEMLSSNEDSFRLLLESFPRMLLLSVESHVKPMVEFLENIGIPKERTRSIFLLFPPI 339
           RGGL+MLSSNE+SFRLLLESFPRMLLLS++SHVKPMVEFLE IGIPKER R IFL FPPI
Sbjct: 241 RGGLDMLSSNEESFRLLLESFPRMLLLSIQSHVKPMVEFLEAIGIPKERMRGIFLSFPPI 300

Query: 340 IFFGTEVLKSRIMAFEEVGIGDMEFGKLLLKYPWIVSDCIQGNIKQIGSFFELEKNDKCI 399
           IFFGTEVLKSRIM FE+VGI +MEFGKLL KYPWI S+CIQGN+KQI SFFELEK     
Sbjct: 301 IFFGTEVLKSRIMTFEKVGIVEMEFGKLLPKYPWITSNCIQGNLKQIVSFFELEK----- 360

Query: 400 FCKLSEHRKNLKEKAEMVIGPKCNFHWEGFNSESVPFFGKELKRKGIPLGKHFGLYFEAF 459
                                                                       
Sbjct: 361 ------------------------------------------------------------ 420

Query: 460 ILCGGSASVRHASYIVEEVPNASITDAIRSWPLILGSSTSKLKLMVDRFGELGVRSKKLG 519
                             VPNASITDAIRSWPLILGSS SKL+LMVD F ELGVRSKKLG
Sbjct: 421 ------------------VPNASITDAIRSWPLILGSSASKLELMVDSFDELGVRSKKLG 480

Query: 520 QVIATSPQILLQKPREFLQVVSYLEEIGFDKESVGRIIARCPEISATSVEKTLKRKLEFL 579
           QVIATSPQ+LLQ+P+EFLQVVSYLEEIGFDKESVGRI+ARCPEI ATSVEKTL+RKLEFL
Sbjct: 481 QVIATSPQLLLQRPQEFLQVVSYLEEIGFDKESVGRILARCPEIFATSVEKTLRRKLEFL 540

Query: 580 ISIGVSKANLPRAIRKYPELLVSDPDQTLLPRIRYLKQRGLSERDIAFMVGRFSPLLGYS 639
           ISIGVSK +LPRAIRKYPELLVSDPD+TL PRIRYL+QRGLS+RDIAFMVGRFSPLLGYS
Sbjct: 541 ISIGVSKTHLPRAIRKYPELLVSDPDRTLFPRIRYLRQRGLSKRDIAFMVGRFSPLLGYS 589

Query: 640 IEEVLKPKLDFLVNIMEKPIKAVVDYPRYFSYSLEKKITPRFRVLKGRNIECSLKDMLGK 699
           IEEVLKPKLDFLVN+MEKPIK VV+YPRYFSYSLEKKITPRFRVLK RNIEC+LKDMLGK
Sbjct: 601 IEEVLKPKLDFLVNVMEKPIKEVVEYPRYFSYSLEKKITPRFRVLKERNIECNLKDMLGK 589

Query: 700 NDEEFAVEFMDNKGT 715
           NDEEFAV FM +KGT
Sbjct: 661 NDEEFAVMFMGDKGT 589

[Close]

BLAST of Spg005868 vs. NCBI nr
Match: XP_022949554.1 (transcription termination factor MTERF2, chloroplastic [Cucurbita moschata])

HSP 1 Score: 939.9 bits (2428), Expect = 1.4e-269
Identity = 506/675 (74.96%), Postives = 541/675 (80.15%), Query Frame = 0


Query: 40  MASLFFPIPTINGSIKSSPHVPLNRFTLSQPRFLLPLHFRPFPSRFHFFLSSSHFIPLAS 99
           MAS+FFPIPTI+ S KSS  +P+NRF+LSQPR LLPL   PF SRFHF  +SS FIPLAS
Sbjct: 1   MASVFFPIPTIHRSFKSSTPIPINRFSLSQPRSLLPLDSCPFRSRFHFSSTSSRFIPLAS 60

Query: 100 TSSGALPFSEDPLDSTAVARLAVSEYLQRFGISEEESVSIASNSPRFLKMLVDGVRELDE 159
           TSS   P  +D L+S   ARLAVSEYLQR G+SEEESVSIASNSPRFLKMLVDGVRELDE
Sbjct: 61  TSSDVPP--DDSLNSLEEARLAVSEYLQRLGVSEEESVSIASNSPRFLKMLVDGVRELDE 120

Query: 160 TSMWIPWSKEGGRPPLGEGFGFKEKVSLMAMEKGDCGKVAFLESAGMNLSSAMNVARYLS 219
           TSMWI WS EG R P+G+GFGFKEKV+LMA EKGD GKVAFLESAGMNLSSAMNVARYLS
Sbjct: 121 TSMWISWSSEGER-PVGDGFGFKEKVALMAREKGDNGKVAFLESAGMNLSSAMNVARYLS 180

Query: 220 GEMLPSLVYKVKYMKELFFSGSGDGKLIGKSARRMMMNLSIPPDDDVQQTLSFFEKIEAR 279
           GEMLPSL+YKVKYMKELFFSGSGDGK IGKSARRMM N SIPPDDDVQQTLSFFEKIEAR
Sbjct: 181 GEMLPSLIYKVKYMKELFFSGSGDGKFIGKSARRMMTNFSIPPDDDVQQTLSFFEKIEAR 240

Query: 280 RGGLEMLSSNEDSFRLLLESFPRMLLLSVESHVKPMVEFLENIGIPKERTRSIFLLFPPI 339
           RGGL+MLSSNE+SFRLLLESFPRMLLLS++SHVKPMVEFLE IGIPKER R IFL FPPI
Sbjct: 241 RGGLDMLSSNEESFRLLLESFPRMLLLSIQSHVKPMVEFLEAIGIPKERMRGIFLSFPPI 300

Query: 340 IFFGTEVLKSRIMAFEEVGIGDMEFGKLLLKYPWIVSDCIQGNIKQIGSFFELEKNDKCI 399
           IFFGTEVLKSRIM FE+VGI +MEFGKLL KYPWI S+CIQ N+KQI SFFELEK     
Sbjct: 301 IFFGTEVLKSRIMTFEKVGIVEMEFGKLLPKYPWITSNCIQCNLKQIVSFFELEK----- 360

Query: 400 FCKLSEHRKNLKEKAEMVIGPKCNFHWEGFNSESVPFFGKELKRKGIPLGKHFGLYFEAF 459
                                                                       
Sbjct: 361 ------------------------------------------------------------ 420

Query: 460 ILCGGSASVRHASYIVEEVPNASITDAIRSWPLILGSSTSKLKLMVDRFGELGVRSKKLG 519
                             VPNASITDAIRSWPLILGSS SKL+LMVD F ELGVRSKKLG
Sbjct: 421 ------------------VPNASITDAIRSWPLILGSSASKLELMVDSFDELGVRSKKLG 480

Query: 520 QVIATSPQILLQKPREFLQVVSYLEEIGFDKESVGRIIARCPEISATSVEKTLKRKLEFL 579
           QVIATSPQ+LLQ+P+EFLQVVSYLEEIGFDKESVGRI+ARCPEI ATSVEKTL+RKLEFL
Sbjct: 481 QVIATSPQLLLQRPQEFLQVVSYLEEIGFDKESVGRILARCPEIFATSVEKTLRRKLEFL 540

Query: 580 ISIGVSKANLPRAIRKYPELLVSDPDQTLLPRIRYLKQRGLSERDIAFMVGRFSPLLGYS 639
           ISIGVSK +LPRAIRKYPELLVSDPD+TL PRIRYL+QRGLS+RDIAFMVGRFSPLLGYS
Sbjct: 541 ISIGVSKTHLPRAIRKYPELLVSDPDRTLFPRIRYLRQRGLSKRDIAFMVGRFSPLLGYS 589

Query: 640 IEEVLKPKLDFLVNIMEKPIKAVVDYPRYFSYSLEKKITPRFRVLKGRNIECSLKDMLGK 699
           IEEVLKPKLDFLVN+MEKPIK VV+YPRYFSYSLEKKITPRFRVLK RNIEC+LKDMLGK
Sbjct: 601 IEEVLKPKLDFLVNVMEKPIKEVVEYPRYFSYSLEKKITPRFRVLKERNIECNLKDMLGK 589

Query: 700 NDEEFAVEFMDNKGT 715
           NDEEFAV FM +KGT
Sbjct: 661 NDEEFAVMFMGDKGT 589

[Close]

BLAST of Spg005868 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 2.7e-29
Identity = 75/230 (32.61%), Postives = 134/230 (58.26%), Query Frame = 0


Query: 483 ITDAIRSWPLILGSST-SKLKLMVDRFGELGVRSKKLGQVIATSPQILLQK-PREFLQVV 542
           +  AI  +P IL  S   KL  ++  F  LGV   +LG++I  +P+++      +   +V
Sbjct: 95  VASAITKFPPILSHSVEEKLCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIV 154

Query: 543 SYLEEIGFDKES-VGRIIARCPEISATSVEKTLKRKLEFL-ISIGVSKANLPRAIRKYPE 602
           S+L  +G D++  +G+++ + P +   SV+K L+   EFL  S+G+S+  +   +  +P+
Sbjct: 155 SFLASLGLDQDGMIGKVLVKNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQ 214

Query: 603 LLVSDPDQTLLPRIRYLKQRGLSERDIAFMVGRFSPLLGYSIEEVLKPKLDFLVNIMEKP 662
           LL  D ++ L P   YLK+ G  +  IA MV  +  +L  S++  L+P++ FLV +M + 
Sbjct: 215 LLCRDVNKILKPNYDYLKECGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRG 274

Query: 663 IKAVVDYPRYFSYSLEKKITPRFRVLKGRNIECSLKDMLGKNDEEFAVEF 709
           +  V  YP +F + L+KK+  RF+++K  NI+CSL++ML  N ++F  +F
Sbjct: 275 MDEVASYPEFFHHGLKKKVESRFKLVKKNNIDCSLREMLDCNTKKFHEKF 324

[Close]

BLAST of Spg005868 vs. ExPASy Swiss-Prot
Match: Q84X53 (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF1 PE=2 SV=2)

HSP 1 Score: 113.6 bits (283), Expect = 1.0e-23
Identity = 71/222 (31.98%), Postives = 121/222 (54.50%), Query Frame = 0


Query: 486 AIRSWPLILGSSTSKLKLMVDRFGELGVRSKKLGQVIATSPQILLQKPR-EFLQVVSYL- 545
           A+R  P +  +  S +  +       G+    +G+++   P +L   P  E L V+ +L 
Sbjct: 50  ALRVNPSLRSAPISSVVSVETLLSSTGLSRPAVGRILDMFPDLLTSDPESEILPVLRFLS 109

Query: 546 EEIGFDKESVGRIIARCPEISATSVEKTLKRKLEFLISIGVSKANLPRAIRKYPELLVSD 605
            EI   ++ + + I+RCP +  +SV+  L+  L FL ++G           +   LLVS+
Sbjct: 110 NEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGF--VGRDTITSRNTVLLVSN 169

Query: 606 PDQTLLPRIRYLKQ-RGLSERDIAFMVGRFSPLLGYSIEEVLKPKLDFLVNIMEKPIKAV 665
            ++TL+P+I YL++  G +  ++A MV R   LL YS++  L PK++F +  M   +K +
Sbjct: 170 VERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVDNNLVPKVEFFIEEMRGDVKEL 229

Query: 666 VDYPRYFSYSLEKKITPRFRVLKGRNIECSLKDMLGKNDEEF 705
             +P+YFS+SLE+KI PR R+LK   I   L +ML  +D +F
Sbjct: 230 KRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQF 269

[Close]

BLAST of Spg005868 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 7.2e-22
Identity = 63/228 (27.63%), Postives = 114/228 (50.00%), Query Frame = 0


Query: 478 VPNASITDAIRSWPLILG-SSTSKLKLMVDRFGELGVRSKKLGQVIATSPQILLQKPREF 537
           +P + I   +   P I G S T  LK  +     LG+   +  ++I+  P IL    ++ 
Sbjct: 244 IPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKIISRFPAILTYSRQKL 303

Query: 538 LQVVSYLEEIGFDKESVGRIIARCPEISATSVEKTLKRKLEFLISIGVSKANLPRAIRKY 597
              V +L + G  +E +GRI+ RCP I + SVE  L+  +E+  S+ V  A L   + + 
Sbjct: 304 TSTVEFLSQTGLTEEQIGRILTRCPNIMSYSVEDKLRPTMEYFRSLNVDVAVL---LHRC 363

Query: 598 PELLVSDPDQTLLPRIRYLKQRGLSERDIAFMVGRFSPLLGYSIEEVLKPKLDFLVNIME 657
           P+      +  L P   +  ++G    +I  M+ R+  L  +S++E + PK D+    M+
Sbjct: 364 PQTFGLSIESNLKPVTEFFLEKGFGLDEIGIMISRYGALYTFSLKENVMPKWDYF-QTMD 423

Query: 658 KPIKAVVDYPRYFSYSLEKKITPRFRVLKGRNIECSLKDMLGKNDEEF 705
            P   +V +P++F YSL+++I PR+ +++   +   L  +L  +  EF
Sbjct: 424 YPKSELVKFPQFFGYSLQERIKPRYELVQRSGVRLLLNQVLSLSGIEF 467

[Close]

BLAST of Spg005868 vs. ExPASy Swiss-Prot
Match: Q9FM80 (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 7.9e-21
Identity = 66/227 (29.07%), Postives = 116/227 (51.10%), Query Frame = 0


Query: 499 SKLKLMVDRFGELGVRSKKLGQVIATSPQILLQKPREFLQ-VVSYL-EEIGFDKESVGRI 558
           + LK  +     LG+ + K+GQ++A +P +        L+  + YL EE+G  +  VG++
Sbjct: 253 NNLKAHISFLMGLGIPNSKIGQIVAATPSLFSYSVENSLRPTIRYLIEEVGIKETDVGKV 312

Query: 559 IARCPEISATSVEKTLKRKLEFLI-SIGVSKANLPRAIRKYPELLVSDPDQTLLPRIRYL 618
           +   P+I    ++ T   +  FL   +G  + ++ + ++K+P+LL    D   LPRI +L
Sbjct: 313 VQLSPQILVQRLDITWNTRYMFLSKELGAPRDSVVKMVKKHPQLLHYSIDDGFLPRINFL 372

Query: 619 KQRGLSERDIAFMVGRFSPLLGYSIEEVLKPKLDFLVNIMEKPIKAVVDYPRYFSYSLEK 678
           +  G+   DI  ++   + +L  S+E+ LKPK  +LVN +   +  +  YP Y S SL++
Sbjct: 373 RSIGMCNSDILKVLTSLTQVLSLSLEDNLKPKYMYLVNELNNEVHILTKYPMYLSLSLDQ 432

Query: 679 KITPRFRVL----KGRNIECSLKDMLGKNDEEFAVEFMDNKGTEYLS 719
           +I PR R L    K R     L  ++  NDE F  ++       YL+
Sbjct: 433 RIRPRHRFLVELKKVRKGPFPLSSLV-PNDESFCQQWAGTSVDTYLA 478

[Close]

BLAST of Spg005868 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 6.7e-20
Identity = 60/217 (27.65%), Postives = 116/217 (53.46%), Query Frame = 0


Query: 491 PLILGSS-TSKLKLMVDRFGELGVRSKKLGQVIATSPQI-LLQKPREFLQVVSYLEEIGF 550
           P ++G S   + K +V  F  LG+  + + +++   P +  +   +     V +L+E+G 
Sbjct: 377 PHLMGCSIEERWKPLVKYFYYLGIPKEGMKRILVVKPILYCIDLEKTIAPKVRFLQEMGI 436

Query: 551 DKESVGRIIARCPEISATSVEKTLKRKLEFLIS-IGVSKANLPRAIRKYPELLVSDPDQT 610
             E++G ++ + P +   S+ K ++  + FL++  GV++ ++ + I   P LL       
Sbjct: 437 PNEAIGNMLVKFPSLLTNSLYKKIRPVVIFLLTRAGVTQKDIGKVIAMDPALLGCSIGTK 496

Query: 611 LLPRIRYLKQRGLSERDIAFMVGRFSPLLGYSIEEVLKPKLDFLVNIMEKPIKAVVDYPR 670
           L P +RY    G+    +  M+  F  LL Y+++  L+PK  +L   M +P++ ++++PR
Sbjct: 497 LEPNMRYYISLGIRFYQLGEMIADFPMLLRYNVDN-LRPKYRYLRRTMIRPLQDLIEFPR 556

Query: 671 YFSYSLEKKITPRFRVLKGRNIECSLKDMLGKNDEEF 705
           +FSYSLE++I PR  ++    +   L+ ML   DEEF
Sbjct: 557 FFSYSLERRIIPRHTIMVENRVNFKLRYMLACTDEEF 592

[Close]

BLAST of Spg005868 vs. ExPASy TrEMBL
Match: A0A6J1GD59 (transcription termination factor MTERF2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111452868 PE=3 SV=1)

HSP 1 Score: 939.9 bits (2428), Expect = 6.9e-270
Identity = 506/675 (74.96%), Postives = 541/675 (80.15%), Query Frame = 0


Query: 40  MASLFFPIPTINGSIKSSPHVPLNRFTLSQPRFLLPLHFRPFPSRFHFFLSSSHFIPLAS 99
           MAS+FFPIPTI+ S KSS  +P+NRF+LSQPR LLPL   PF SRFHF  +SS FIPLAS
Sbjct: 1   MASVFFPIPTIHRSFKSSTPIPINRFSLSQPRSLLPLDSCPFRSRFHFSSTSSRFIPLAS 60

Query: 100 TSSGALPFSEDPLDSTAVARLAVSEYLQRFGISEEESVSIASNSPRFLKMLVDGVRELDE 159
           TSS   P  +D L+S   ARLAVSEYLQR G+SEEESVSIASNSPRFLKMLVDGVRELDE
Sbjct: 61  TSSDVPP--DDSLNSLEEARLAVSEYLQRLGVSEEESVSIASNSPRFLKMLVDGVRELDE 120

Query: 160 TSMWIPWSKEGGRPPLGEGFGFKEKVSLMAMEKGDCGKVAFLESAGMNLSSAMNVARYLS 219
           TSMWI WS EG R P+G+GFGFKEKV+LMA EKGD GKVAFLESAGMNLSSAMNVARYLS
Sbjct: 121 TSMWISWSSEGER-PVGDGFGFKEKVALMAREKGDNGKVAFLESAGMNLSSAMNVARYLS 180

Query: 220 GEMLPSLVYKVKYMKELFFSGSGDGKLIGKSARRMMMNLSIPPDDDVQQTLSFFEKIEAR 279
           GEMLPSL+YKVKYMKELFFSGSGDGK IGKSARRMM N SIPPDDDVQQTLSFFEKIEAR
Sbjct: 181 GEMLPSLIYKVKYMKELFFSGSGDGKFIGKSARRMMTNFSIPPDDDVQQTLSFFEKIEAR 240

Query: 280 RGGLEMLSSNEDSFRLLLESFPRMLLLSVESHVKPMVEFLENIGIPKERTRSIFLLFPPI 339
           RGGL+MLSSNE+SFRLLLESFPRMLLLS++SHVKPMVEFLE IGIPKER R IFL FPPI
Sbjct: 241 RGGLDMLSSNEESFRLLLESFPRMLLLSIQSHVKPMVEFLEAIGIPKERMRGIFLSFPPI 300

Query: 340 IFFGTEVLKSRIMAFEEVGIGDMEFGKLLLKYPWIVSDCIQGNIKQIGSFFELEKNDKCI 399
           IFFGTEVLKSRIM FE+VGI +MEFGKLL KYPWI S+CIQ N+KQI SFFELEK     
Sbjct: 301 IFFGTEVLKSRIMTFEKVGIVEMEFGKLLPKYPWITSNCIQCNLKQIVSFFELEK----- 360

Query: 400 FCKLSEHRKNLKEKAEMVIGPKCNFHWEGFNSESVPFFGKELKRKGIPLGKHFGLYFEAF 459
                                                                       
Sbjct: 361 ------------------------------------------------------------ 420

Query: 460 ILCGGSASVRHASYIVEEVPNASITDAIRSWPLILGSSTSKLKLMVDRFGELGVRSKKLG 519
                             VPNASITDAIRSWPLILGSS SKL+LMVD F ELGVRSKKLG
Sbjct: 421 ------------------VPNASITDAIRSWPLILGSSASKLELMVDSFDELGVRSKKLG 480

Query: 520 QVIATSPQILLQKPREFLQVVSYLEEIGFDKESVGRIIARCPEISATSVEKTLKRKLEFL 579
           QVIATSPQ+LLQ+P+EFLQVVSYLEEIGFDKESVGRI+ARCPEI ATSVEKTL+RKLEFL
Sbjct: 481 QVIATSPQLLLQRPQEFLQVVSYLEEIGFDKESVGRILARCPEIFATSVEKTLRRKLEFL 540

Query: 580 ISIGVSKANLPRAIRKYPELLVSDPDQTLLPRIRYLKQRGLSERDIAFMVGRFSPLLGYS 639
           ISIGVSK +LPRAIRKYPELLVSDPD+TL PRIRYL+QRGLS+RDIAFMVGRFSPLLGYS
Sbjct: 541 ISIGVSKTHLPRAIRKYPELLVSDPDRTLFPRIRYLRQRGLSKRDIAFMVGRFSPLLGYS 589

Query: 640 IEEVLKPKLDFLVNIMEKPIKAVVDYPRYFSYSLEKKITPRFRVLKGRNIECSLKDMLGK 699
           IEEVLKPKLDFLVN+MEKPIK VV+YPRYFSYSLEKKITPRFRVLK RNIEC+LKDMLGK
Sbjct: 601 IEEVLKPKLDFLVNVMEKPIKEVVEYPRYFSYSLEKKITPRFRVLKERNIECNLKDMLGK 589

Query: 700 NDEEFAVEFMDNKGT 715
           NDEEFAV FM +KGT
Sbjct: 661 NDEEFAVMFMGDKGT 589

[Close]

BLAST of Spg005868 vs. ExPASy TrEMBL
Match: A0A6J1KAI5 (transcription termination factor MTERF2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111493166 PE=3 SV=1)

HSP 1 Score: 928.7 bits (2399), Expect = 1.6e-266
Identity = 504/682 (73.90%), Postives = 540/682 (79.18%), Query Frame = 0


Query: 40  MASLFFP---IPTINGSIKSSPHVPLNRFTLSQPRFLLPLHFRPFPSRFHFFLSSSHFIP 99
           MAS+ FP   IPTI+ S  SS  +P+NRF+LSQPR LL L   PF S FHF  +SS FIP
Sbjct: 1   MASVVFPIPTIPTIHRSFASSTPIPINRFSLSQPRSLLSLDSCPFRSHFHFSSTSSRFIP 60

Query: 100 LASTSSGALPFS----EDPLDSTAVARLAVSEYLQRFGISEEESVSIASNSPRFLKMLVD 159
           LAS SS ALP S    +D L S   ARLAVSEYLQR G+SEEESVSIASNSPRFLKMLVD
Sbjct: 61  LASLSSDALPSSDVPPDDSLHSLEEARLAVSEYLQRLGVSEEESVSIASNSPRFLKMLVD 120

Query: 160 GVRELDETSMWIPWSKEGGRPPLGEGFGFKEKVSLMAMEKGDCGKVAFLESAGMNLSSAM 219
           GVRELDETSMWI WS EG R P+G+GFGFKEKV LMA EKGD GKVAFLESAGMNLSSAM
Sbjct: 121 GVRELDETSMWISWSSEGER-PVGDGFGFKEKVELMAREKGDNGKVAFLESAGMNLSSAM 180

Query: 220 NVARYLSGEMLPSLVYKVKYMKELFFSGSGDGKLIGKSARRMMMNLSIPPDDDVQQTLSF 279
           NVARYLSGEMLPSL+YKVKYMKELFFSGSGDGKLIGKSARRMM NLSIPPDDDVQQTLSF
Sbjct: 181 NVARYLSGEMLPSLIYKVKYMKELFFSGSGDGKLIGKSARRMMTNLSIPPDDDVQQTLSF 240

Query: 280 FEKIEARRGGLEMLSSNEDSFRLLLESFPRMLLLSVESHVKPMVEFLENIGIPKERTRSI 339
           FEKIEARRGGL+MLSSNE+SFRLLLESFPRMLLLS++SHVKPMVEFLE IGIPKER R I
Sbjct: 241 FEKIEARRGGLDMLSSNEESFRLLLESFPRMLLLSIQSHVKPMVEFLEAIGIPKERMRGI 300

Query: 340 FLLFPPIIFFGTEVLKSRIMAFEEVGIGDMEFGKLLLKYPWIVSDCIQGNIKQIGSFFEL 399
           FL FPPIIFFGTEVLKSRIM FE+VGI +MEFGKLL KYPWI S+CIQGN+KQI SFFEL
Sbjct: 301 FLSFPPIIFFGTEVLKSRIMTFEKVGIVEMEFGKLLPKYPWITSNCIQGNLKQIVSFFEL 360

Query: 400 EKNDKCIFCKLSEHRKNLKEKAEMVIGPKCNFHWEGFNSESVPFFGKELKRKGIPLGKHF 459
           EK                                                          
Sbjct: 361 EK---------------------------------------------------------- 420

Query: 460 GLYFEAFILCGGSASVRHASYIVEEVPNASITDAIRSWPLILGSSTSKLKLMVDRFGELG 519
                                    VPNASITDAIRSWPLILGSS S+L+LMVD F ELG
Sbjct: 421 -------------------------VPNASITDAIRSWPLILGSSASRLELMVDSFDELG 480

Query: 520 VRSKKLGQVIATSPQILLQKPREFLQVVSYLEEIGFDKESVGRIIARCPEISATSVEKTL 579
           VRSKKLGQVIATSPQ+LLQ+P+EFLQVVSYLEEIGFDKE+VGRI+ARCPEI ATSVEKTL
Sbjct: 481 VRSKKLGQVIATSPQLLLQRPQEFLQVVSYLEEIGFDKETVGRILARCPEIFATSVEKTL 540

Query: 580 KRKLEFLISIGVSKANLPRAIRKYPELLVSDPDQTLLPRIRYLKQRGLSERDIAFMVGRF 639
           +RKLEFLISIGVSK  LPRAIRKYPELLVSDPD+TL PRIRYL+QRGLS+RDIAFMVGRF
Sbjct: 541 RRKLEFLISIGVSKTQLPRAIRKYPELLVSDPDRTLFPRIRYLRQRGLSKRDIAFMVGRF 598

Query: 640 SPLLGYSIEEVLKPKLDFLVNIMEKPIKAVVDYPRYFSYSLEKKITPRFRVLKGRNIECS 699
           SPLLGYSIEEVLKPKLDFLVN+MEKPIK VV+YPRYFSYSLEKKITPRFR+LK RNIEC+
Sbjct: 601 SPLLGYSIEEVLKPKLDFLVNVMEKPIKEVVEYPRYFSYSLEKKITPRFRMLKERNIECN 598

Query: 700 LKDMLGKNDEEFAVEFMDNKGT 715
           L+DMLGKNDEEFAV FMD+KGT
Sbjct: 661 LEDMLGKNDEEFAVMFMDDKGT 598

[Close]

BLAST of Spg005868 vs. ExPASy TrEMBL
Match: A0A1S3C6K3 (transcription termination factor MTERF2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497057 PE=3 SV=1)

HSP 1 Score: 912.1 bits (2356), Expect = 1.5e-261
Identity = 498/693 (71.86%), Postives = 539/693 (77.78%), Query Frame = 0


Query: 37  ISTMAS--LFFPIPTINGSIKSSPHVPLNRFTLSQPRFLLPLHFRPFPSRFHFFLSSSHF 96
           ++TMAS  LFFPIPTIN   KSSP +PL+RF L Q      L+F PFPSRFH  L+SSHF
Sbjct: 1   MATMASFFLFFPIPTINACTKSSPLIPLHRFILPQ-----SLNFCPFPSRFHSLLTSSHF 60

Query: 97  IPLASTSSGALPFS-----EDPLDSTAVARLAVSEYLQRFGISEEESVSIASNSPRFLKM 156
           +PLAS S  ALPFS     EDPL S A A+LAVSEYLQRFG+SE+ESVSIASNSPRFLKM
Sbjct: 61  LPLASISHDALPFSDDTPEEDPLQSLAEAQLAVSEYLQRFGVSEDESVSIASNSPRFLKM 120

Query: 157 LVDGVRELDETSMWIPWSKEGGRPPLGEGFGFKEKVSLMAMEKGDCGKVAFLESAGMNLS 216
           LVD VRELDETSMW+ WSKE G     +GFGFKEKV+LMAMEKGDCG+VAFLES GMNLS
Sbjct: 121 LVDAVRELDETSMWVSWSKERGEL---DGFGFKEKVALMAMEKGDCGQVAFLESVGMNLS 180

Query: 217 SAMNVARYLSGEMLPSLVYKVKYMKELFFSGSGDGKLIGKSARRMMMNLSIPPDDDVQQT 276
           SAMNVARYLSGEMLPSL+YKVKYMKELFFSGSGDGKLIGK+ARRMM NLSIPPDDDVQQT
Sbjct: 181 SAMNVARYLSGEMLPSLIYKVKYMKELFFSGSGDGKLIGKNARRMMTNLSIPPDDDVQQT 240

Query: 277 LSFFEKIEARRGGLEMLSSNEDSFRLLLESFPRMLLLSVESHVKPMVEFLENIGIPKERT 336
           LSFFEKIEARRGGL+MLSS+E+SFRLLLESFPRMLLLSVESHVKPMVEFLE I IPKER 
Sbjct: 241 LSFFEKIEARRGGLDMLSSSEESFRLLLESFPRMLLLSVESHVKPMVEFLEKISIPKERM 300

Query: 337 RSIFLLFPPIIFFGTEVLKSRIMAFEEVGIGDMEFGKLLLKYPWIVSDCIQGNIKQIGSF 396
           RSIFLLFPP+IFF TEVLKSRIMAFEEVG+     GKLL+KYPWI+S+CI GN+KQI SF
Sbjct: 301 RSIFLLFPPVIFFDTEVLKSRIMAFEEVGVEVTVVGKLLIKYPWIMSNCIDGNLKQIISF 360

Query: 397 FELEKNDKCIFCKLSEHRKNLKEKAEMVIGPKCNFHWEGFNSESVPFFGKELKRKGIPLG 456
           FELEK                                                       
Sbjct: 361 FELEK------------------------------------------------------- 420

Query: 457 KHFGLYFEAFILCGGSASVRHASYIVEEVPNASITDAIRSWPLILGSSTSKLKLMVDRFG 516
                                       VPNASI +AI SWPLILGSSTSKL+LMVDRF 
Sbjct: 421 ----------------------------VPNASIINAISSWPLILGSSTSKLQLMVDRFD 480

Query: 517 ELGVRSKKLGQVIATSPQILLQKPREFLQVVSYLEEIGFDKESVGRIIARCPEISATSVE 576
            LGVRSKKLGQVIATSPQILL +P+EFLQVVS+LEE+GFDKESVGRIIARCPEISATS+E
Sbjct: 481 GLGVRSKKLGQVIATSPQILLLEPQEFLQVVSFLEEVGFDKESVGRIIARCPEISATSIE 540

Query: 577 KTLKRKLEFLISIGVSKANLPRAIRKYPELLVSDPDQTLLPRIRYLKQRGLSERDIAFMV 636
           KTLKRKLEFLISIGVSK +LPRAI+KYPELLVSDP +TLLPRIRYL+QRGLSERDIA MV
Sbjct: 541 KTLKRKLEFLISIGVSKTHLPRAIKKYPELLVSDPHKTLLPRIRYLRQRGLSERDIASMV 600

Query: 637 GRFSPLLGYSIEEVLKPKLDFLVNIMEKPIKAVVDYPRYFSYSLEKKITPRFRVLKGRNI 696
           GRFSPLLGYSIEEVL+PKLDFLVNIMEKPIK VVDYPRYFSYSLE KI PRF VLKG N+
Sbjct: 601 GRFSPLLGYSIEEVLRPKLDFLVNIMEKPIKEVVDYPRYFSYSLENKIIPRFLVLKGMNV 602

Query: 697 ECSLKDMLGKNDEEFAVEFMDNKGTEYLSSSPT 723
           ECSLKDMLGKNDEEF+V F++ K T      PT
Sbjct: 661 ECSLKDMLGKNDEEFSVAFLNYKRTAEHLRPPT 602

[Close]

BLAST of Spg005868 vs. ExPASy TrEMBL
Match: A0A0A0LV84 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G532380 PE=3 SV=1)

HSP 1 Score: 881.3 bits (2276), Expect = 2.9e-252
Identity = 482/677 (71.20%), Postives = 518/677 (76.51%), Query Frame = 0


Query: 43  LFFPIPTINGSIKSSPHVPLNRFTLSQPRFLLPLHFRPFPSRFHFFLSSSHFIPLASTSS 102
           LFFP PTI GS KSSP +PL+   L Q      L+F PFPSRFH  L+SSHF+PLAS S 
Sbjct: 6   LFFPTPTITGSSKSSPLIPLHPSILPQ-----SLNFCPFPSRFHSLLTSSHFLPLASISP 65

Query: 103 GALPFS-----EDPLDSTAVARLAVSEYLQRFGISEEESVSIASNSPRFLKMLVDGVREL 162
            ALPFS     EDPL S A A+LAVSEYLQRFG+ E+E+VSIASNSPRFLKMLVD VREL
Sbjct: 66  DALPFSDDPPQEDPLHSLAEAQLAVSEYLQRFGVLEDEAVSIASNSPRFLKMLVDAVREL 125

Query: 163 DETSMWIPWSKEGGRPPLGEGFGFKEKVSLMAMEKGDCGKVAFLESAGMNLSSAMNVARY 222
           DETSMW  WSKE G     +GFGFKEKV+ MAMEKGDCGKVAFLES GMNLSSAMNVARY
Sbjct: 126 DETSMWDSWSKERGEL---DGFGFKEKVASMAMEKGDCGKVAFLESVGMNLSSAMNVARY 185

Query: 223 LSGEMLPSLVYKVKYMKELFFSGSGDGKLIGKSARRMMMNLSIPPDDDVQQTLSFFEKIE 282
           LSGEMLPSL+YKVKYMK LFFSGSGDG LIGK+ARRMM NLSIPPDDDVQQTLSFFEKIE
Sbjct: 186 LSGEMLPSLIYKVKYMKALFFSGSGDGILIGKNARRMMTNLSIPPDDDVQQTLSFFEKIE 245

Query: 283 ARRGGLEMLSSNEDSFRLLLESFPRMLLLSVESHVKPMVEFLENIGIPKERTRSIFLLFP 342
           ARRGGL+MLSSNE+SF LLLESFPRMLLLSVESHVKPMVEFLE IGIPKER RSIFLLFP
Sbjct: 246 ARRGGLDMLSSNEESFGLLLESFPRMLLLSVESHVKPMVEFLEKIGIPKERMRSIFLLFP 305

Query: 343 PIIFFGTEVLKSRIMAFEEVGIGDMEFGKLLLKYPWIVSDCIQGNIKQIGSFFELEKNDK 402
           P+IFF TEVLKSRIMAFEEVG+    FGKLLLKYPWI S+CI GN+KQI SFFE EK   
Sbjct: 306 PVIFFDTEVLKSRIMAFEEVGVEVTVFGKLLLKYPWITSNCIHGNLKQIVSFFESEK--- 365

Query: 403 CIFCKLSEHRKNLKEKAEMVIGPKCNFHWEGFNSESVPFFGKELKRKGIPLGKHFGLYFE 462
                                                                       
Sbjct: 366 ------------------------------------------------------------ 425

Query: 463 AFILCGGSASVRHASYIVEEVPNASITDAIRSWPLILGSSTSKLKLMVDRFGELGVRSKK 522
                               VP+ASI +AI SWPLILGSSTSKL+LMVDR   LGVRSKK
Sbjct: 426 --------------------VPSASIINAISSWPLILGSSTSKLELMVDRLDGLGVRSKK 485

Query: 523 LGQVIATSPQILLQKPREFLQVVSYLEEIGFDKESVGRIIARCPEISATSVEKTLKRKLE 582
           LGQVIATSPQILL KP+EFLQVVS+LEE+GFDKES+GRIIARCPEISATSVEKTLKRKLE
Sbjct: 486 LGQVIATSPQILLLKPQEFLQVVSFLEEVGFDKESIGRIIARCPEISATSVEKTLKRKLE 545

Query: 583 FLISIGVSKANLPRAIRKYPELLVSDPDQTLLPRIRYLKQRGLSERDIAFMVGRFSPLLG 642
           FLI IGVSK +LPRAI+KYPELLVSDP +TL PRI+YL+QRGLSERDIA MV RFSPLLG
Sbjct: 546 FLIKIGVSKTHLPRAIKKYPELLVSDPHKTLHPRIKYLRQRGLSERDIASMVVRFSPLLG 591

Query: 643 YSIEEVLKPKLDFLVNIMEKPIKAVVDYPRYFSYSLEKKITPRFRVLKGRNIECSLKDML 702
           YSIEEVL+PKLDFLVNIM+KP K VVDYPRYFSYSLE KI PRFR LKG N+ECSLKDML
Sbjct: 606 YSIEEVLRPKLDFLVNIMKKPKKEVVDYPRYFSYSLENKIIPRFRALKGMNVECSLKDML 591

Query: 703 GKNDEEFAVEFMDNKGT 715
           GKNDEEF+V F+ NK T
Sbjct: 666 GKNDEEFSVAFLGNKRT 591

[Close]

BLAST of Spg005868 vs. ExPASy TrEMBL
Match: A0A5D3BE49 (Transcription termination factor MTERF2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00780 PE=3 SV=1)

HSP 1 Score: 877.1 bits (2265), Expect = 5.5e-251
Identity = 492/700 (70.29%), Postives = 538/700 (76.86%), Query Frame = 0


Query: 37  ISTMAS--LFFPIPTINGSIKSSPHVPLNRFTLSQPRFLLPLHFRPFPSRFHFFLSSSHF 96
           ++TMAS  LFFPIPTIN   KSSP +PL+RF L Q      L+F PFPSRFH  L+SSHF
Sbjct: 1   MATMASFFLFFPIPTINACTKSSPLIPLHRFILPQ-----SLNFCPFPSRFHSLLTSSHF 60

Query: 97  IPLASTSSGALPFS-----EDPLDSTAVARLAVSEYLQRFGISEEESVSIASNSPRFLKM 156
           +PLAS S  ALPFS     EDPL S A A+LAVSEYLQRFG+SE+ESVSIASNSPRFLKM
Sbjct: 61  LPLASISHDALPFSDDTPEEDPLQSLAEAQLAVSEYLQRFGVSEDESVSIASNSPRFLKM 120

Query: 157 LVDGVRELDETSMWIPWSKEGGRPPLGEGFGFKEKVSLMAMEKGDCGKVAFLESAGMNLS 216
           LVD VRELDETSMW+ WSKE G     +GFGFKEKV+LMAMEKGDCG+VAFLES GMNLS
Sbjct: 121 LVDAVRELDETSMWVSWSKERGEL---DGFGFKEKVALMAMEKGDCGQVAFLESVGMNLS 180

Query: 217 SAMNVARYLSGEMLPSLVYKVKYMKELFFSGSGDGKLIGKSARRMMMNLSIPPDDDVQQT 276
           SAMNVARYLSGEMLPSL+YKVKYMKELFFSGSGDGKLIGK+ARRMM NLSIPPDDDVQQT
Sbjct: 181 SAMNVARYLSGEMLPSLIYKVKYMKELFFSGSGDGKLIGKNARRMMTNLSIPPDDDVQQT 240

Query: 277 LSFFEKIEARRGGLEMLSSNEDSFRLLLESFPRMLLLSVESHVKPMVEFLENIGIPKERT 336
           LSFFEKIEARRGGL+MLSS+E+SFRLLLESFPRMLLLSVESHVKPMVEFLE I IPKER 
Sbjct: 241 LSFFEKIEARRGGLDMLSSSEESFRLLLESFPRMLLLSVESHVKPMVEFLEKISIPKERM 300

Query: 337 RSIFLLFPPIIFFGTEVLKSRIMAFEEVGIGDMEFGKLLLKYPWIVSDCIQGNIKQIGSF 396
           RSIFLLFPP+IFF TEVLKSRIMAFEEVG+     GKLL+KYPWI+S+CI GN+KQI SF
Sbjct: 301 RSIFLLFPPVIFFDTEVLKSRIMAFEEVGVEVTVVGKLLIKYPWIMSNCIDGNLKQIISF 360

Query: 397 FELEKNDKCIFCKLSEHRKNLKEKAEMVIGPKCNFHWEG--FNSESVPFFGKELKRKGIP 456
           FEL                   EKA +   P   F WEG     ++  +    L      
Sbjct: 361 FEL-------------------EKASIENLPFNGFVWEGAKVKGDNTRYLFSFLLPLWFK 420

Query: 457 LGKHFGLYFEAFILCGGSASVRHASYIVEE-----VPNASITDAIRSWPLILGSSTSKLK 516
           L   F L      L   S+S     +   E     VPNASI +AI SWPLILGSSTSKL+
Sbjct: 421 LPFIFVLSIHILFLFIPSSSHSVFLFAFPELNFYGVPNASIINAISSWPLILGSSTSKLQ 480

Query: 517 LMVDRFGELGVRSKKLGQVIATSPQILLQKPREFLQVVSYLEEIGFDKESVGRIIARCPE 576
           LMVDRF  LGVRSKKLGQVIATSPQILL +P+EFLQVVS+LEE+GFDKESVGRIIARCPE
Sbjct: 481 LMVDRFDGLGVRSKKLGQVIATSPQILLLEPQEFLQVVSFLEEVGFDKESVGRIIARCPE 540

Query: 577 ISATSVEKTLKRKLEFLISIGVSKANLPRAIRKYPELLVSDPDQTLLPRIRYLKQRGLSE 636
           ISATS+EKTLKRKLEFLISIGVSK +LPRAI+KYPELLVSDP +TLLPRIRYL+QRGLSE
Sbjct: 541 ISATSIEKTLKRKLEFLISIGVSKTHLPRAIKKYPELLVSDPHKTLLPRIRYLRQRGLSE 600

Query: 637 RDIAFMVGRFSPLLGYSIEEVLKPKLDFLVNIMEKPIKAVVDYPRYFSYSLEKKITPRFR 696
           RDIA MVGRFSPLLGYSIEEVL+PKLDFLVNIMEKPIK VVDYP                
Sbjct: 601 RDIASMVGRFSPLLGYSIEEVLRPKLDFLVNIMEKPIKEVVDYP---------------- 648

Query: 697 VLKGRNIECSLKDMLGKNDEEFAVEFMDNKGTEYLSSSPT 723
                    SLKDMLGKNDEEF+V F++ K T      PT
Sbjct: 661 ---------SLKDMLGKNDEEFSVAFLNYKRTAEHLRPPT 648

[Close]

BLAST of Spg005868 vs. TAIR 10
Match: AT1G78930.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 563.1 bits (1450), Expect = 3.4e-160
Identity = 314/644 (48.76%), Postives = 409/644 (63.51%), Query Frame = 0


Query: 68  SQPRFLLPLHFRPFPSRFHFFLSSSHFIPLASTSSGALPFSEDPLDSTAVARLAVSEYLQ 127
           S   F  P     FP+ +H    S      AS   G   FS +   +   A+ +++ +L+
Sbjct: 27  SSSLFFSPRRVTLFPA-YH----SGRVTVSASLQHGDSNFSSNSSQTNQEAQNSIAGFLR 86

Query: 128 R-FGISEEESVSIASNSPRFLKMLVDGVRELDETSMWIPWSKEGGRPPLGEGFGFKEKVS 187
           R  G+SE +S  I+SN P++ +M+V+GVR+L+E   W  W   G    + EG GFKEKV 
Sbjct: 87  RDTGLSEADSDFISSNCPKYTRMIVEGVRDLEE---WNSWKGSGESERVEEGLGFKEKVI 146

Query: 188 LMAMEKGDCGKVAFLESAGMNLSSAMNVARYLSGEMLPSLVYKVKYMKELFFSGSGDGKL 247
            M  +KGD GKVAFLES G++LSSAM +A Y+S E LP L+ KVKY+KE+FFSGS +  L
Sbjct: 147 YMVKQKGDGGKVAFLESLGLSLSSAMYLAHYVSSESLPILLDKVKYLKEIFFSGSDEKGL 206

Query: 248 IGKSARRMMMNLSIPPDDDVQQTLSFFEKIEARRGGLEMLSSNEDSFRLLLESFPRMLLL 307
           +GK ARRMM+ LSIP D+DVQQTLSFFEKIEARRGGL+ML S + SFR LLESFPR+LLL
Sbjct: 207 VGKYARRMMLYLSIPIDEDVQQTLSFFEKIEARRGGLDMLGSVDASFRFLLESFPRLLLL 266

Query: 308 SVESHVKPMVEFLENIGIPKERTRSIFLLFPPIIFFGTEVLKSRI-MAFEEVGIGDMEFG 367
           S E+ +KPMVEFLE+IGIPK     + LL+PPI+   TE +K R+  A E+V + + + G
Sbjct: 267 SEENDMKPMVEFLESIGIPKYCLGKVLLLYPPIMLGKTEEIKRRVATAMEKVSVVNKDSG 326

Query: 368 KLLLKYPWIVSDCIQGNIKQIGSFFELEKNDKCIFCKLSEHRKNLKEKAEMVIGPKCNFH 427
           KLLLKYPWI+S  IQ N   IGSFF                                   
Sbjct: 327 KLLLKYPWILSPSIQENYSHIGSFF----------------------------------- 386

Query: 428 WEGFNSESVPFFGKELKRKGIPLGKHFGLYFEAFILCGGSASVRHASYIVEEVPNASITD 487
                                                             E V    I  
Sbjct: 387 ------------------------------------------------YSESVLKMDIDH 446

Query: 488 AIRSWPLILGSSTSKLKLMVDRFGELGVRSKKLGQVIATSPQILLQKPREFLQVVSYLEE 547
           AIR WPL+LG S S +++MV  F +LGVR K++G+VI   PQ+LL KP+EFL+VV +LE+
Sbjct: 447 AIRRWPLLLGCSASNMEMMVKEFDKLGVRDKRMGKVIPKMPQLLLCKPQEFLKVVCFLED 506

Query: 548 IGFDKESVGRIIARCPEISATSVEKTLKRKLEFLISIGVSKANLPRAIRKYPELLVSDPD 607
           +GF KE VG+I+ RCPEI   S+EKTL++KL FL   GVS  + PR I+KYPE L+ D D
Sbjct: 507 LGFQKEIVGQILCRCPEIFGCSIEKTLQKKLIFLTRFGVSTTHFPRIIKKYPEFLIYDAD 566

Query: 608 QTLLPRIRYLKQRGLSERDIAFMVGRFSPLLGYSIEEVLKPKLDFLVNIMEKPIKAVVDY 667
           +T+LPR++YL + G+SER+IAFM+ +FSP+LGYSI++VL+PK +FLVN MEKP++ V++Y
Sbjct: 567 KTVLPRLKYLMEIGISEREIAFMIRKFSPILGYSIDKVLRPKFEFLVNSMEKPVREVIEY 579

Query: 668 PRYFSYSLEKKITPRFRVLKGRNIECSLKDMLGKNDEEFAVEFM 710
           PRYFSYSLEK+I PRFRVLKGRNIEC+L++MLGKNDEEFA +F+
Sbjct: 627 PRYFSYSLEKRIKPRFRVLKGRNIECTLQEMLGKNDEEFAADFL 579

[Close]

BLAST of Spg005868 vs. TAIR 10
Match: AT4G38160.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 132.1 bits (331), Expect = 1.9e-30
Identity = 75/230 (32.61%), Postives = 134/230 (58.26%), Query Frame = 0


Query: 483 ITDAIRSWPLILGSST-SKLKLMVDRFGELGVRSKKLGQVIATSPQILLQK-PREFLQVV 542
           +  AI  +P IL  S   KL  ++  F  LGV   +LG++I  +P+++      +   +V
Sbjct: 95  VASAITKFPPILSHSVEEKLCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIV 154

Query: 543 SYLEEIGFDKES-VGRIIARCPEISATSVEKTLKRKLEFL-ISIGVSKANLPRAIRKYPE 602
           S+L  +G D++  +G+++ + P +   SV+K L+   EFL  S+G+S+  +   +  +P+
Sbjct: 155 SFLASLGLDQDGMIGKVLVKNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQ 214

Query: 603 LLVSDPDQTLLPRIRYLKQRGLSERDIAFMVGRFSPLLGYSIEEVLKPKLDFLVNIMEKP 662
           LL  D ++ L P   YLK+ G  +  IA MV  +  +L  S++  L+P++ FLV +M + 
Sbjct: 215 LLCRDVNKILKPNYDYLKECGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRG 274

Query: 663 IKAVVDYPRYFSYSLEKKITPRFRVLKGRNIECSLKDMLGKNDEEFAVEF 709
           +  V  YP +F + L+KK+  RF+++K  NI+CSL++ML  N ++F  +F
Sbjct: 275 MDEVASYPEFFHHGLKKKVESRFKLVKKNNIDCSLREMLDCNTKKFHEKF 324

[Close]

BLAST of Spg005868 vs. TAIR 10
Match: AT4G38160.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 132.1 bits (331), Expect = 1.9e-30
Identity = 75/230 (32.61%), Postives = 134/230 (58.26%), Query Frame = 0


Query: 483 ITDAIRSWPLILGSST-SKLKLMVDRFGELGVRSKKLGQVIATSPQILLQK-PREFLQVV 542
           +  AI  +P IL  S   KL  ++  F  LGV   +LG++I  +P+++      +   +V
Sbjct: 95  VASAITKFPPILSHSVEEKLCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIV 154

Query: 543 SYLEEIGFDKES-VGRIIARCPEISATSVEKTLKRKLEFL-ISIGVSKANLPRAIRKYPE 602
           S+L  +G D++  +G+++ + P +   SV+K L+   EFL  S+G+S+  +   +  +P+
Sbjct: 155 SFLASLGLDQDGMIGKVLVKNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQ 214

Query: 603 LLVSDPDQTLLPRIRYLKQRGLSERDIAFMVGRFSPLLGYSIEEVLKPKLDFLVNIMEKP 662
           LL  D ++ L P   YLK+ G  +  IA MV  +  +L  S++  L+P++ FLV +M + 
Sbjct: 215 LLCRDVNKILKPNYDYLKECGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRG 274

Query: 663 IKAVVDYPRYFSYSLEKKITPRFRVLKGRNIECSLKDMLGKNDEEFAVEF 709
           +  V  YP +F + L+KK+  RF+++K  NI+CSL++ML  N ++F  +F
Sbjct: 275 MDEVASYPEFFHHGLKKKVESRFKLVKKNNIDCSLREMLDCNTKKFHEKF 324

[Close]

BLAST of Spg005868 vs. TAIR 10
Match: AT4G38160.3 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 132.1 bits (331), Expect = 1.9e-30
Identity = 75/230 (32.61%), Postives = 134/230 (58.26%), Query Frame = 0


Query: 483 ITDAIRSWPLILGSST-SKLKLMVDRFGELGVRSKKLGQVIATSPQILLQK-PREFLQVV 542
           +  AI  +P IL  S   KL  ++  F  LGV   +LG++I  +P+++      +   +V
Sbjct: 95  VASAITKFPPILSHSVEEKLCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIV 154

Query: 543 SYLEEIGFDKES-VGRIIARCPEISATSVEKTLKRKLEFL-ISIGVSKANLPRAIRKYPE 602
           S+L  +G D++  +G+++ + P +   SV+K L+   EFL  S+G+S+  +   +  +P+
Sbjct: 155 SFLASLGLDQDGMIGKVLVKNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQ 214

Query: 603 LLVSDPDQTLLPRIRYLKQRGLSERDIAFMVGRFSPLLGYSIEEVLKPKLDFLVNIMEKP 662
           LL  D ++ L P   YLK+ G  +  IA MV  +  +L  S++  L+P++ FLV +M + 
Sbjct: 215 LLCRDVNKILKPNYDYLKECGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRG 274

Query: 663 IKAVVDYPRYFSYSLEKKITPRFRVLKGRNIECSLKDMLGKNDEEFAVEF 709
           +  V  YP +F + L+KK+  RF+++K  NI+CSL++ML  N ++F  +F
Sbjct: 275 MDEVASYPEFFHHGLKKKVESRFKLVKKNNIDCSLREMLDCNTKKFHEKF 324

[Close]

BLAST of Spg005868 vs. TAIR 10
Match: AT2G03050.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 113.6 bits (283), Expect = 7.1e-25
Identity = 71/222 (31.98%), Postives = 121/222 (54.50%), Query Frame = 0


Query: 486 AIRSWPLILGSSTSKLKLMVDRFGELGVRSKKLGQVIATSPQILLQKPR-EFLQVVSYL- 545
           A+R  P +  +  S +  +       G+    +G+++   P +L   P  E L V+ +L 
Sbjct: 49  ALRVNPSLRSAPISSVVSVETLLSSTGLSRPAVGRILDMFPDLLTSDPESEILPVLRFLS 108

Query: 546 EEIGFDKESVGRIIARCPEISATSVEKTLKRKLEFLISIGVSKANLPRAIRKYPELLVSD 605
            EI   ++ + + I+RCP +  +SV+  L+  L FL ++G           +   LLVS+
Sbjct: 109 NEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGF--VGRDTITSRNTVLLVSN 168

Query: 606 PDQTLLPRIRYLKQ-RGLSERDIAFMVGRFSPLLGYSIEEVLKPKLDFLVNIMEKPIKAV 665
            ++TL+P+I YL++  G +  ++A MV R   LL YS++  L PK++F +  M   +K +
Sbjct: 169 VERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVDNNLVPKVEFFIEEMRGDVKEL 228

Query: 666 VDYPRYFSYSLEKKITPRFRVLKGRNIECSLKDMLGKNDEEF 705
             +P+YFS+SLE+KI PR R+LK   I   L +ML  +D +F
Sbjct: 229 KRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQF 268

The following BLAST results are available for this feature:

BLAST of Spg005868 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895303.1	1.5e-271	74.01	transcription termination factor MTERF4, chloroplastic [Benincasa hispida] >XP_0...	[more]
KAG7037004.1	3.4e-271	75.11	Transcription termination factor MTERF6, chloroplastic/mitochondrial, partial [C...	[more]
KAG6607327.1	7.6e-271	75.26	Transcription termination factor MTERF6, chloroplastic/mitochondrial, partial [C...	[more]
XP_023521598.1	2.9e-270	75.11	transcription termination factor MTERF2, chloroplastic-like isoform X1 [Cucurbit...	[more]
XP_022949554.1	1.4e-269	74.96	transcription termination factor MTERF2, chloroplastic [Cucurbita moschata]	[more]

BLAST of Spg005868 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZL6	2.7e-29	32.61	Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop...	[more]
Q84X53	1.0e-23	31.98	Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX...	[more]
F4JVI3	7.2e-22	27.63	Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9FM80	7.9e-21	29.07	Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O...	[more]
F4IHL3	6.7e-20	27.65	Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O...	[more]

BLAST of Spg005868 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GD59	6.9e-270	74.96	transcription termination factor MTERF2, chloroplastic OS=Cucurbita moschata OX=...	[more]
A0A6J1KAI5	1.6e-266	73.90	transcription termination factor MTERF2, chloroplastic OS=Cucurbita maxima OX=36...	[more]
A0A1S3C6K3	1.5e-261	71.86	transcription termination factor MTERF2, chloroplastic OS=Cucumis melo OX=3656 G...	[more]
A0A0A0LV84	2.9e-252	71.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G532380 PE=3 SV=1	[more]
A0A5D3BE49	5.5e-251	70.29	Transcription termination factor MTERF2 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]

BLAST of Spg005868 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G78930.1	3.4e-160	48.76	Mitochondrial transcription termination factor family protein	[more]
AT4G38160.1	1.9e-30	32.61	Mitochondrial transcription termination factor family protein	[more]
AT4G38160.2	1.9e-30	32.61	Mitochondrial transcription termination factor family protein	[more]
AT4G38160.3	1.9e-30	32.61	Mitochondrial transcription termination factor family protein	[more]
AT2G03050.1	7.1e-25	31.98	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 519..549 e-value: 1.7 score: 17.7 coord: 659..690 e-value: 5.2E-5 score: 32.6 coord: 590..621 e-value: 6.7E-4 score: 29.0 coord: 554..585 e-value: 3.3E-6 score: 36.6 coord: 294..325 e-value: 5.3E-4 score: 29.3 coord: 626..658 e-value: 0.054 score: 22.6 coord: 330..360 e-value: 110.0 score: 11.2 coord: 484..514 e-value: 6.9 score: 15.6
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 316..416 e-value: 1.6E-11 score: 43.7 coord: 274..351 e-value: 2.0E-7 score: 30.3 coord: 476..705 e-value: 3.9E-75 score: 252.7
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 101..719
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 476..718 e-value: 3.1E-50 score: 172.8 coord: 281..415 e-value: 3.8E-14 score: 54.4
None	No IPR available	PANTHER	PTHR13068:SF3	TRANSCRIPTION TERMINATION FACTOR 4, MITOCHONDRIAL	coord: 101..719

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg005868.1	Spg005868.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016020	membrane
molecular_function	GO:0003690	double-stranded DNA binding