Spg005847 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg005847
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	outer envelope pore protein 16, chloroplastic
Location	scaffold11: 2119716 .. 2122508 (+)
RNA-Seq Expression	Spg005847
Synteny	Spg005847

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAGAAGGTGGCGCAAATACTGGCTATCTCGTGGCACTCGCCTCGGGCCTCGTCTTCACAAATCAACGGTGCAGAAGCAGTAAAATCCAAATTGAACTAAACTCCAAAAAGAAAATCAAACAATCTGTAGCGGCAAATTCTAGCTTTAAGGACCCATTCAGCGCCATCCTCCACATTCAATCCCCTCGCACTTCGCACTTCGCACTTCACACACACACTCTCTCTCGGAAGAAAACCATGCCTCGCACCGGCTTCGTCGGCTCCGTTACCACGCCCAAGGTCGACGTCGTCATCGACATGGGCAACCCCTTCCTCAACCTCACCGTCGATGGCTTCTTGAAGATCGGATCCGTAATCCTTCCTTTTCTCTCTTTCTTTTTCTCTCTGTTTTTCCTTCGCCCAGTCTCAAATCCGAATGGTTTCTCTTCTCTTCCTTCTTTTTAGGTCGCCGCCACCCGAGCGGCTGCCGAGGATGCGTATCGTGTCGTCAGAAAAGGTTTTGTTCCTTGCCCTTTCGTTTTGGTTTCTCTCTCTCTCTCTCTGTTTGTTTCGCTTTGTTGTTTTTCTGGTTCCTGCGAAATTGATTTCGTTCTTTCTATACTGATTTAAGGCATTGTGTTGTTTCGATTCTACAGGATCGATTTCTAGTCACAATTTTGAGAACACGGTTAGTGTCTCTTGCTTTGAATCTCAATTTGTGAATTCTGATGGTTTATAGATTTTGATTTTTCATTCTAAGAACGTTCGTCAAGTGTATGATTGGGAAAGAGATTTCTGATGTGTGGATTTTCTTTTACACTGAAATTACTACATGCAGTCCTCCGTTTTTTCCTTTGTTGTGGTAGTTTCTGTTGAGAACTCTGTGTACCAGTTTCATTTCTAACGCATGGAACTTGGTTTCAGGGTAGGTTTCATGTTTGAACTGAAATTTGGAACTCTCATTGCACAAAAATCTTGGAAAGGTTTCAAAATGATTGTTCTGTTTTTTAAAAAATAATATTAAATCACCACCACGGCCCTAAATGTTTAAGCGAACTATGGTCTTGAGCTTAAGATTCCCTGTTTTTTGGTCTTTTGATCTATTCTGAACCAGAAAAGAAAAACATCAAAGCTTGAAATTGTTGTCTCTCTCGGTCTCACTCACTCTGCTTTCTTACCCGGCTAACTAATTTCAATTTCTGTTGCAGTTGAAGAAAATGTGTAAAGAAGGTGCATATTGGGGTAAGCATAGATCACATTACTCCTCAGTGAAGTACTTAACTTAATGGATGAGTTTTAGCATCTGTAAACTTTCTGCCAATTTGATAAGAATTTGTTTTTGGTTCATTGCTCTTGGAAACTAAGCTTATAAAGATCACCTGCCTAGGTTTGGTTTTGTTTAGTTTTTCACTTTTTAAATGTACTTTTGAAATTTTAGCCAATGCTAAGAAACAAAAAAAACATGTTTTTTGAACTTCTTTTTCAATGTTATGAAGTTTGGCTATAATTTAAAAAACAACCTTGAAAGTCGATTTGAAAATATGGAAAAATGTTAATAATTGACACTATTTTTTCTGTTTGAATGCAGGAACTGTAGCCGGAGTTTATGTTGGTATGGAGTATGGGGTAGAAAGGATTCGCGGCACAAGAGATTGGGTATGTTAGCCATAAATTCAAAATCATCATTTAAATCAAGTTCAGAGTTATTCTTTTAGATCGTTGCTTCAAGCTCTCTGTGTTTGTTTGGGAATATTTTCGAAATCCTGTTCAATTTTTGTCACTCATCACTGTTCAGGAAGGTTGGTCCACATTGTAGAATGTATTGGTCCTAGAATGGAAAGGCACCCTTGTCTATTACTATTTGATTTCAAACAACCCAGAAACAAAATCTCTCAAGATCCTAGATATATTATCTCAATGTTCCTTACAGTTGTCCTCTTATTAAAGTGATCATATCATTACAACCATGTAATACAGAATCAATGTTTCTGGTTCTATAACTCGGGGCTCAGTTGTCTGTATTATTTCAAACATGCAGTCCTCTTTGAAGTATGAAGTCTTCCAAATTATTTCAAGAATCTACCGTTGCTTTTTTCATTTGACCATAGTACCAATAGATTCATTTGTCAATATTTTGAAGAGAAATTTGATTGTGGGTCCAAATGTTTGAGCATGTTCCAGAAAAATGCAATGATTGGAGGTGCTTTTACTGGGGCTCTGGTATCGGCAGCGAGCAACAACCACCGGGACAAAATTGTCATTGACGCAATTACAGGAGGGGCTGTTGCCACTGCTGCAGAGTTCATAAACTATCTTACTTGAGCTGAGGTTTCCGGGCATTTTCATGTCACTTGTAAACCTTGAGAGGAAGGTATGACTGAAGATGACTCTTTCTCATCGTTGGATAATTGTCCTGTCTGTAAAAAATAGCATCAAAATGTTAATGTTGTCTATTCAAACTTTATTTTTCTTTGTTTTTGCAGAATAACCAGCTCTCATAGAGTTGCAGCCCAAAATATGAAGGAAAAGAGAAAAGAGAGGAATAGAAATATCTTCTTCCTTCATCAATCACAGCCACATGTCTTGTTGAGGCTGTAATGGTAGCTATAGTTTCTTGTTATGAAGAACAAAATTATTGGTTTAATTTTTAAGAAAGCGATATTTCTTATTTTCTTGTCTTTTAACATGATAATTTAAGTTGGGGTTCACCTTTAAAGTTGAAGATTTGTGAATCTATTTGATACCAGTCACAATCATGGAAAAACCTTTTCCAATAATGGAAAGATATTGAGCATCCAATCACAATATCCC

mRNA sequence

ATGAGAGAAGGTGGCGCAAATACTGGCTATCTCGTGGCACTCGCCTCGGGCCTCGTCTTCACAAATCAACGGTGCAGAAGCAGTAAAATCCAAATTGAACTAAACTCCAAAAAGAAAATCAAACAATCTGTAGCGGCAAATTCTAGCTTTAAGGACCCATTCAGCGCCATCCTCCACATTCAATCCCCTCGCACTTCGCACTTCGCACTTCACACACACACTCTCTCTCGGAAGAAAACCATGCCTCGCACCGGCTTCGTCGGCTCCGTTACCACGCCCAAGGTCGACGTCGTCATCGACATGGGCAACCCCTTCCTCAACCTCACCGTCGATGGCTTCTTGAAGATCGGATCCGTCGCCGCCACCCGAGCGGCTGCCGAGGATGCGTATCGTGTCGTCAGAAAAGGATCGATTTCTAGTCACAATTTTGAGAACACGTTGAAGAAAATGTGTAAAGAAGGTGCATATTGGGGAACTGTAGCCGGAGTTTATGTTGGTATGGAGTATGGGGTAGAAAGGATTCGCGGCACAAGAGATTGGAAAAATGCAATGATTGGAGGTGCTTTTACTGGGGCTCTGGTATCGGCAGCGAGCAACAACCACCGGGACAAAATTGTCATTGACGCAATTACAGGAGGGGCTGTTGCCACTGCTGCAGAGTTCATAAACTATCTTACTTGA

Coding sequence (CDS)

ATGAGAGAAGGTGGCGCAAATACTGGCTATCTCGTGGCACTCGCCTCGGGCCTCGTCTTCACAAATCAACGGTGCAGAAGCAGTAAAATCCAAATTGAACTAAACTCCAAAAAGAAAATCAAACAATCTGTAGCGGCAAATTCTAGCTTTAAGGACCCATTCAGCGCCATCCTCCACATTCAATCCCCTCGCACTTCGCACTTCGCACTTCACACACACACTCTCTCTCGGAAGAAAACCATGCCTCGCACCGGCTTCGTCGGCTCCGTTACCACGCCCAAGGTCGACGTCGTCATCGACATGGGCAACCCCTTCCTCAACCTCACCGTCGATGGCTTCTTGAAGATCGGATCCGTCGCCGCCACCCGAGCGGCTGCCGAGGATGCGTATCGTGTCGTCAGAAAAGGATCGATTTCTAGTCACAATTTTGAGAACACGTTGAAGAAAATGTGTAAAGAAGGTGCATATTGGGGAACTGTAGCCGGAGTTTATGTTGGTATGGAGTATGGGGTAGAAAGGATTCGCGGCACAAGAGATTGGAAAAATGCAATGATTGGAGGTGCTTTTACTGGGGCTCTGGTATCGGCAGCGAGCAACAACCACCGGGACAAAATTGTCATTGACGCAATTACAGGAGGGGCTGTTGCCACTGCTGCAGAGTTCATAAACTATCTTACTTGA

Protein sequence

MREGGANTGYLVALASGLVFTNQRCRSSKIQIELNSKKKIKQSVAANSSFKDPFSAILHIQSPRTSHFALHTHTLSRKKTMPRTGFVGSVTTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYRVVRKGSISSHNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGAFTGALVSAASNNHRDKIVIDAITGGAVATAAEFINYLT

Homology

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BLAST of Spg005847 vs. NCBI nr
Match: XP_038893818.1 (outer envelope pore protein 16, chloroplastic [Benincasa hispida])

HSP 1 Score: 280.4 bits (716), Expect = 1.4e-71
Identity = 137/146 (93.84%), Postives = 144/146 (98.63%), Query Frame = 0


Query: 81  MPRTGFVGSVTTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYRVVRKGSISS 140
           MPRTGF+GS++TPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAY VVRKG+IS+
Sbjct: 1   MPRTGFIGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60

Query: 141 HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGAFTGALVSAASNN 200
           HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVER+RGTRDWKNAMIGGA TGALVSAASNN
Sbjct: 61  HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERVRGTRDWKNAMIGGALTGALVSAASNN 120

Query: 201 HRDKIVIDAITGGAVATAAEFINYLT 227
           +RDKIVIDAITGGAVATAAEFINYLT
Sbjct: 121 NRDKIVIDAITGGAVATAAEFINYLT 146

[Close]

BLAST of Spg005847 vs. NCBI nr
Match: XP_022964801.1 (outer envelope pore protein 16, chloroplastic [Cucurbita moschata] >XP_022970582.1 outer envelope pore protein 16, chloroplastic [Cucurbita maxima] >XP_023519566.1 outer envelope pore protein 16, chloroplastic [Cucurbita pepo subsp. pepo] >KAG6583432.1 Outer envelope pore protein 16, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 277.3 bits (708), Expect = 1.2e-70
Identity = 137/146 (93.84%), Postives = 143/146 (97.95%), Query Frame = 0


Query: 81  MPRTGFVGSVTTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYRVVRKGSISS 140
           MPRTGFVGS++TPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAY VVRKG+ISS
Sbjct: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTISS 60

Query: 141 HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGAFTGALVSAASNN 200
           HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRG RDWKNAMIGGA TGA+VSAASN+
Sbjct: 61  HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGRRDWKNAMIGGALTGAMVSAASNS 120

Query: 201 HRDKIVIDAITGGAVATAAEFINYLT 227
           +RDKIVIDAITGGAVATAAEFINYLT
Sbjct: 121 NRDKIVIDAITGGAVATAAEFINYLT 146

[Close]

BLAST of Spg005847 vs. NCBI nr
Match: XP_008457483.1 (PREDICTED: outer envelope pore protein 16, chloroplastic [Cucumis melo] >TYJ97413.1 outer envelope pore protein 16 [Cucumis melo var. makuwa])

HSP 1 Score: 274.6 bits (701), Expect = 7.5e-70
Identity = 134/146 (91.78%), Postives = 141/146 (96.58%), Query Frame = 0


Query: 81  MPRTGFVGSVTTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYRVVRKGSISS 140
           MPRTGFVGS++TPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAY VVRKG+IS+
Sbjct: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60

Query: 141 HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGAFTGALVSAASNN 200
           HNFENTLKKMC EGAYWG VAG YVGMEYGVER+RGTRDWKNAMIGGA TGALVSAASNN
Sbjct: 61  HNFENTLKKMCTEGAYWGAVAGAYVGMEYGVERVRGTRDWKNAMIGGALTGALVSAASNN 120

Query: 201 HRDKIVIDAITGGAVATAAEFINYLT 227
           +RDK+VIDAITGGAVATAAEFINYLT
Sbjct: 121 NRDKVVIDAITGGAVATAAEFINYLT 146

[Close]

BLAST of Spg005847 vs. NCBI nr
Match: KAE8023298.1 (hypothetical protein FH972_009013 [Carpinus fangiana])

HSP 1 Score: 265.8 bits (678), Expect = 3.5e-67
Identity = 128/146 (87.67%), Postives = 139/146 (95.21%), Query Frame = 0


Query: 81  MPRTGFVGSVTTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYRVVRKGSISS 140
           MPR+ F GSVTTPKVDV IDMGNPFLNLTVDGFLKIG+VAATRA AEDAY  V+KGSIS+
Sbjct: 1   MPRSRFSGSVTTPKVDVAIDMGNPFLNLTVDGFLKIGTVAATRAVAEDAYHAVKKGSIST 60

Query: 141 HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGAFTGALVSAASNN 200
           HNFE+TLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGA TGALVSAASNN
Sbjct: 61  HNFEHTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGAVTGALVSAASNN 120

Query: 201 HRDKIVIDAITGGAVATAAEFINYLT 227
           ++DK+V+DAITGGA+ATAAEF+NYLT
Sbjct: 121 NKDKVVVDAITGGAIATAAEFLNYLT 146

[Close]

BLAST of Spg005847 vs. NCBI nr
Match: XP_011658142.1 (outer envelope pore protein 16, chloroplastic [Cucumis sativus] >KAE8653245.1 hypothetical protein Csa_019696 [Cucumis sativus])

HSP 1 Score: 262.3 bits (669), Expect = 3.8e-66
Identity = 130/146 (89.04%), Postives = 136/146 (93.15%), Query Frame = 0


Query: 81  MPRTGFVGSVTTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYRVVRKGSISS 140
           MP TGFVGS +TPK+DVVID G PFLNLTVDGFLKIGSVAATRAAAEDAY VV+ G+ISS
Sbjct: 1   MPPTGFVGSSSTPKIDVVIDTGYPFLNLTVDGFLKIGSVAATRAAAEDAYFVVKNGAISS 60

Query: 141 HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGAFTGALVSAASNN 200
           H FENTLKKMCKEGAYWG VAG YVGMEYGVERIRGTRDWKNAMIGGA TGALVSAASNN
Sbjct: 61  HKFENTLKKMCKEGAYWGAVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120

Query: 201 HRDKIVIDAITGGAVATAAEFINYLT 227
           +RDK+VIDAITGGAVATAAEFINYLT
Sbjct: 121 NRDKVVIDAITGGAVATAAEFINYLT 146

[Close]

BLAST of Spg005847 vs. ExPASy Swiss-Prot
Match: Q41050 (Outer envelope pore protein 16, chloroplastic OS=Pisum sativum OX=3888 GN=OEP16 PE=1 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.3e-64
Identity = 117/146 (80.14%), Postives = 134/146 (91.78%), Query Frame = 0


Query: 81  MPRTGFVGSVTTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYRVVRKGSISS 140
           MPR+ F GS+++PK+DVVIDMGNPFLNLTVDGFLKIG+VAATR+ AED + ++RKGSISS
Sbjct: 1   MPRSSFSGSLSSPKLDVVIDMGNPFLNLTVDGFLKIGAVAATRSVAEDTFHIIRKGSISS 60

Query: 141 HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGAFTGALVSAASNN 200
           ++FE +LKKMCKEGAYWG +AGVYVGMEYGVERIRGTRDWKNAM GGA TGALVSAASNN
Sbjct: 61  NDFEKSLKKMCKEGAYWGAIAGVYVGMEYGVERIRGTRDWKNAMFGGAVTGALVSAASNN 120

Query: 201 HRDKIVIDAITGGAVATAAEFINYLT 227
            +DKI +DAITG A+ATAAEFINYLT
Sbjct: 121 KKDKIAVDAITGAAIATAAEFINYLT 146

[Close]

BLAST of Spg005847 vs. ExPASy Swiss-Prot
Match: Q9ZV24 (Outer envelope pore protein 16-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP161 PE=1 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 7.5e-49
Identity = 88/143 (61.54%), Postives = 112/143 (78.32%), Query Frame = 0


Query: 81  MPRTGFVGSVTTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYRVVRKGSISS 140
           MP + F G+V+TPK+ V +DMGNPFLNLTVD FLKIG+V  T++ AED Y+ + KGS+S 
Sbjct: 1   MPSSTFSGTVSTPKLSVAVDMGNPFLNLTVDAFLKIGAVGVTKSLAEDTYKAIDKGSLSK 60

Query: 141 HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGAFTGALVSAASNN 200
              E+ LKK+CKEG YWG   GVY+G EYG+ERIRG+RDWKNAM+ GA TGA++SA    
Sbjct: 61  STLEHALKKLCKEGVYWGAAGGVYIGTEYGIERIRGSRDWKNAMLAGAATGAVLSAVGKK 120

Query: 201 HRDKIVIDAITGGAVATAAEFIN 224
            +D IVIDAI GGA+ATA++F+N
Sbjct: 121 GKDTIVIDAILGGALATASQFVN 143

[Close]

BLAST of Spg005847 vs. ExPASy Swiss-Prot
Match: Q0WMZ5 (Outer envelope pore protein 16-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP162 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.7e-14
Identity = 46/155 (29.68%), Postives = 76/155 (49.03%), Query Frame = 0


Query: 98  VIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYRVVRKGS-------------------- 157
           + D+G+P LN   D F+K   V A +A + +AY  V  G+                    
Sbjct: 21  LFDLGHPLLNRIADSFVKAAGVGALQAVSREAYFTVVDGAGFDSNNVGPPSEITGNKKHR 80

Query: 158 ------ISSHNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIR-GTRDWKNAMIGGAFT 217
                  SS + +  +K   KE   WG  AG+Y G+ YG+  +R G  DW+N+ + GA T
Sbjct: 81  FPNLRGESSKSLDALVKNTGKESLQWGLAAGLYSGITYGMTEVRGGAHDWRNSAVAGALT 140

Query: 218 GALVSAASNNH--RDKIVIDAITGGAVATAAEFIN 224
           GA ++  ++     +++V  A+TG A++TAA  ++
Sbjct: 141 GAAMAMTTSERTSHEQVVQSALTGAAISTAANLLS 175

[Close]

BLAST of Spg005847 vs. ExPASy Swiss-Prot
Match: Q9LZH8 (Outer envelope pore protein 16-4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP164 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 4.6e-06
Identity = 33/100 (33.00%), Postives = 53/100 (53.00%), Query Frame = 0


Query: 104 PFLNLTVDGFLKI---GSVAATRAAAEDAYRVVRKGSISSHNFENTLKKMCKEGAYWGTV 163
           P  +LTV+  L++   G +    A   DA ++   G +S  +F    K + + G   G V
Sbjct: 10  PCSSLTVESVLRVATAGGLYGLCAGPRDARKIGLSG-VSQASF--VAKSIGRFGFQCGLV 69

Query: 164 AGVYVGMEYGVERIRGTRDWKNAMIGGAFTGALVSAASNN 201
           +GV+     G++R RG  DW NA++GGA  GA V+ ++ N
Sbjct: 70  SGVFTMTHCGLQRYRGKNDWVNALVGGAVAGAAVAISTRN 106

[Close]

BLAST of Spg005847 vs. ExPASy TrEMBL
Match: A0A6J1HZI5 (outer envelope pore protein 16, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111469516 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 5.6e-71
Identity = 137/146 (93.84%), Postives = 143/146 (97.95%), Query Frame = 0


Query: 81  MPRTGFVGSVTTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYRVVRKGSISS 140
           MPRTGFVGS++TPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAY VVRKG+ISS
Sbjct: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTISS 60

Query: 141 HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGAFTGALVSAASNN 200
           HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRG RDWKNAMIGGA TGA+VSAASN+
Sbjct: 61  HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGRRDWKNAMIGGALTGAMVSAASNS 120

Query: 201 HRDKIVIDAITGGAVATAAEFINYLT 227
           +RDKIVIDAITGGAVATAAEFINYLT
Sbjct: 121 NRDKIVIDAITGGAVATAAEFINYLT 146

[Close]

BLAST of Spg005847 vs. ExPASy TrEMBL
Match: A0A6J1HJY9 (outer envelope pore protein 16, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111464797 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 5.6e-71
Identity = 137/146 (93.84%), Postives = 143/146 (97.95%), Query Frame = 0


Query: 81  MPRTGFVGSVTTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYRVVRKGSISS 140
           MPRTGFVGS++TPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAY VVRKG+ISS
Sbjct: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTISS 60

Query: 141 HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGAFTGALVSAASNN 200
           HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRG RDWKNAMIGGA TGA+VSAASN+
Sbjct: 61  HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGRRDWKNAMIGGALTGAMVSAASNS 120

Query: 201 HRDKIVIDAITGGAVATAAEFINYLT 227
           +RDKIVIDAITGGAVATAAEFINYLT
Sbjct: 121 NRDKIVIDAITGGAVATAAEFINYLT 146

[Close]

BLAST of Spg005847 vs. ExPASy TrEMBL
Match: A0A5D3BDN0 (Outer envelope pore protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G002350 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 3.6e-70
Identity = 134/146 (91.78%), Postives = 141/146 (96.58%), Query Frame = 0


Query: 81  MPRTGFVGSVTTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYRVVRKGSISS 140
           MPRTGFVGS++TPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAY VVRKG+IS+
Sbjct: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60

Query: 141 HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGAFTGALVSAASNN 200
           HNFENTLKKMC EGAYWG VAG YVGMEYGVER+RGTRDWKNAMIGGA TGALVSAASNN
Sbjct: 61  HNFENTLKKMCTEGAYWGAVAGAYVGMEYGVERVRGTRDWKNAMIGGALTGALVSAASNN 120

Query: 201 HRDKIVIDAITGGAVATAAEFINYLT 227
           +RDK+VIDAITGGAVATAAEFINYLT
Sbjct: 121 NRDKVVIDAITGGAVATAAEFINYLT 146

[Close]

BLAST of Spg005847 vs. ExPASy TrEMBL
Match: A0A1S3C572 (outer envelope pore protein 16, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497163 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 3.6e-70
Identity = 134/146 (91.78%), Postives = 141/146 (96.58%), Query Frame = 0


Query: 81  MPRTGFVGSVTTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYRVVRKGSISS 140
           MPRTGFVGS++TPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAY VVRKG+IS+
Sbjct: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60

Query: 141 HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGAFTGALVSAASNN 200
           HNFENTLKKMC EGAYWG VAG YVGMEYGVER+RGTRDWKNAMIGGA TGALVSAASNN
Sbjct: 61  HNFENTLKKMCTEGAYWGAVAGAYVGMEYGVERVRGTRDWKNAMIGGALTGALVSAASNN 120

Query: 201 HRDKIVIDAITGGAVATAAEFINYLT 227
           +RDK+VIDAITGGAVATAAEFINYLT
Sbjct: 121 NRDKVVIDAITGGAVATAAEFINYLT 146

[Close]

BLAST of Spg005847 vs. ExPASy TrEMBL
Match: A0A5N6R1E6 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_009013 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.7e-67
Identity = 128/146 (87.67%), Postives = 139/146 (95.21%), Query Frame = 0


Query: 81  MPRTGFVGSVTTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYRVVRKGSISS 140
           MPR+ F GSVTTPKVDV IDMGNPFLNLTVDGFLKIG+VAATRA AEDAY  V+KGSIS+
Sbjct: 1   MPRSRFSGSVTTPKVDVAIDMGNPFLNLTVDGFLKIGTVAATRAVAEDAYHAVKKGSIST 60

Query: 141 HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGAFTGALVSAASNN 200
           HNFE+TLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGA TGALVSAASNN
Sbjct: 61  HNFEHTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGAVTGALVSAASNN 120

Query: 201 HRDKIVIDAITGGAVATAAEFINYLT 227
           ++DK+V+DAITGGA+ATAAEF+NYLT
Sbjct: 121 NKDKVVVDAITGGAIATAAEFLNYLT 146

[Close]

BLAST of Spg005847 vs. TAIR 10
Match: AT2G28900.1 (outer plastid envelope protein 16-1 )

HSP 1 Score: 195.3 bits (495), Expect = 5.4e-50
Identity = 88/143 (61.54%), Postives = 112/143 (78.32%), Query Frame = 0


Query: 81  MPRTGFVGSVTTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYRVVRKGSISS 140
           MP + F G+V+TPK+ V +DMGNPFLNLTVD FLKIG+V  T++ AED Y+ + KGS+S 
Sbjct: 1   MPSSTFSGTVSTPKLSVAVDMGNPFLNLTVDAFLKIGAVGVTKSLAEDTYKAIDKGSLSK 60

Query: 141 HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGAFTGALVSAASNN 200
              E+ LKK+CKEG YWG   GVY+G EYG+ERIRG+RDWKNAM+ GA TGA++SA    
Sbjct: 61  STLEHALKKLCKEGVYWGAAGGVYIGTEYGIERIRGSRDWKNAMLAGAATGAVLSAVGKK 120

Query: 201 HRDKIVIDAITGGAVATAAEFIN 224
            +D IVIDAI GGA+ATA++F+N
Sbjct: 121 GKDTIVIDAILGGALATASQFVN 143

[Close]

BLAST of Spg005847 vs. TAIR 10
Match: AT4G16160.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 82.0 bits (201), Expect = 6.6e-16
Identity = 48/153 (31.37%), Postives = 76/153 (49.67%), Query Frame = 0


Query: 98  VIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYRVVRKGSISS-------------HNFE 157
           + D+G+P LN   D F+K   V A +A + +AY  V  G  S+             H F 
Sbjct: 21  LFDLGHPLLNRIADSFVKAAGVGALQAVSREAYFTVVDGFDSNNVGPPSEITGNKKHRFP 80

Query: 158 N-----------TLKKMCKEGAYWGTVAGVYVGMEYGVERIR-GTRDWKNAMIGGAFTGA 217
           N            +K   KE   WG  AG+Y G+ YG+  +R G  DW+N+ + GA TGA
Sbjct: 81  NLRGESSKSLDALVKNTGKESLQWGLAAGLYSGITYGMTEVRGGAHDWRNSAVAGALTGA 140

Query: 218 LVSAASNNH--RDKIVIDAITGGAVATAAEFIN 224
            ++  ++     +++V  A+TG A++TAA  ++
Sbjct: 141 AMAMTTSERTSHEQVVQSALTGAAISTAANLLS 173

[Close]

BLAST of Spg005847 vs. TAIR 10
Match: AT4G16160.2 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 80.5 bits (197), Expect = 1.9e-15
Identity = 46/155 (29.68%), Postives = 76/155 (49.03%), Query Frame = 0


Query: 98  VIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYRVVRKGS-------------------- 157
           + D+G+P LN   D F+K   V A +A + +AY  V  G+                    
Sbjct: 21  LFDLGHPLLNRIADSFVKAAGVGALQAVSREAYFTVVDGAGFDSNNVGPPSEITGNKKHR 80

Query: 158 ------ISSHNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIR-GTRDWKNAMIGGAFT 217
                  SS + +  +K   KE   WG  AG+Y G+ YG+  +R G  DW+N+ + GA T
Sbjct: 81  FPNLRGESSKSLDALVKNTGKESLQWGLAAGLYSGITYGMTEVRGGAHDWRNSAVAGALT 140

Query: 218 GALVSAASNNH--RDKIVIDAITGGAVATAAEFIN 224
           GA ++  ++     +++V  A+TG A++TAA  ++
Sbjct: 141 GAAMAMTTSERTSHEQVVQSALTGAAISTAANLLS 175

[Close]

BLAST of Spg005847 vs. TAIR 10
Match: AT3G62880.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 53.1 bits (126), Expect = 3.3e-07
Identity = 33/100 (33.00%), Postives = 53/100 (53.00%), Query Frame = 0


Query: 104 PFLNLTVDGFLKI---GSVAATRAAAEDAYRVVRKGSISSHNFENTLKKMCKEGAYWGTV 163
           P  +LTV+  L++   G +    A   DA ++   G +S  +F    K + + G   G V
Sbjct: 10  PCSSLTVESVLRVATAGGLYGLCAGPRDARKIGLSG-VSQASF--VAKSIGRFGFQCGLV 69

Query: 164 AGVYVGMEYGVERIRGTRDWKNAMIGGAFTGALVSAASNN 201
           +GV+     G++R RG  DW NA++GGA  GA V+ ++ N
Sbjct: 70  SGVFTMTHCGLQRYRGKNDWVNALVGGAVAGAAVAISTRN 106

[Close]

BLAST of Spg005847 vs. TAIR 10
Match: AT3G62880.2 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 53.1 bits (126), Expect = 3.3e-07
Identity = 33/100 (33.00%), Postives = 53/100 (53.00%), Query Frame = 0


Query: 104 PFLNLTVDGFLKI---GSVAATRAAAEDAYRVVRKGSISSHNFENTLKKMCKEGAYWGTV 163
           P  +LTV+  L++   G +    A   DA ++   G +S  +F    K + + G   G V
Sbjct: 10  PCSSLTVESVLRVATAGGLYGLCAGPRDARKIGLSG-VSQASF--VAKSIGRFGFQCGLV 69

Query: 164 AGVYVGMEYGVERIRGTRDWKNAMIGGAFTGALVSAASNN 201
           +GV+     G++R RG  DW NA++GGA  GA V+ ++ N
Sbjct: 70  SGVFTMTHCGLQRYRGKNDWVNALVGGAVAGAAVAISTRN 106

The following BLAST results are available for this feature:

BLAST of Spg005847 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893818.1	1.4e-71	93.84	outer envelope pore protein 16, chloroplastic [Benincasa hispida]	[more]
XP_022964801.1	1.2e-70	93.84	outer envelope pore protein 16, chloroplastic [Cucurbita moschata] >XP_022970582...	[more]
XP_008457483.1	7.5e-70	91.78	PREDICTED: outer envelope pore protein 16, chloroplastic [Cucumis melo] >TYJ9741...	[more]
KAE8023298.1	3.5e-67	87.67	hypothetical protein FH972_009013 [Carpinus fangiana]	[more]
XP_011658142.1	3.8e-66	89.04	outer envelope pore protein 16, chloroplastic [Cucumis sativus] >KAE8653245.1 hy...	[more]

BLAST of Spg005847 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q41050	1.3e-64	80.14	Outer envelope pore protein 16, chloroplastic OS=Pisum sativum OX=3888 GN=OEP16 ...	[more]
Q9ZV24	7.5e-49	61.54	Outer envelope pore protein 16-1, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
Q0WMZ5	2.7e-14	29.68	Outer envelope pore protein 16-2, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LZH8	4.6e-06	33.00	Outer envelope pore protein 16-4, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Spg005847 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HZI5	5.6e-71	93.84	outer envelope pore protein 16, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1HJY9	5.6e-71	93.84	outer envelope pore protein 16, chloroplastic OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A5D3BDN0	3.6e-70	91.78	Outer envelope pore protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3C572	3.6e-70	91.78	outer envelope pore protein 16, chloroplastic OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A5N6R1E6	1.7e-67	87.67	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_009013 PE=4 SV=1	[more]

BLAST of Spg005847 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28900.1	5.4e-50	61.54	outer plastid envelope protein 16-1	[more]
AT4G16160.1	6.6e-16	31.37	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]
AT4G16160.2	1.9e-15	29.68	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]
AT3G62880.1	3.3e-07	33.00	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]
AT3G62880.2	3.3e-07	33.00	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF02466	Tim17	coord: 137..215 e-value: 1.2E-11 score: 45.0
None	No IPR available	PANTHER	PTHR15371:SF2	OUTER ENVELOPE PORE PROTEIN 16-1, CHLOROPLASTIC	coord: 81..224
None	No IPR available	PANTHER	PTHR15371	TIM23	coord: 81..224

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg005847.1	Spg005847.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0003333	amino acid transmembrane transport
biological_process	GO:0006811	ion transport
biological_process	GO:0045037	protein import into chloroplast stroma
cellular_component	GO:0009707	chloroplast outer membrane
cellular_component	GO:0034426	etioplast membrane
cellular_component	GO:0046930	pore complex
molecular_function	GO:0015171	amino acid transmembrane transporter activity
molecular_function	GO:0015288	porin activity
molecular_function	GO:0042803	protein homodimerization activity