Spg005806 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg005806
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	sister chromatid cohesion protein SCC4
Location	scaffold11: 11182 .. 27124 (+)
RNA-Seq Expression	Spg005806
Synteny	Spg005806

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAGGAAGACCTTGACCATATTTTGTGGAGATGCGATTTTGCTACGGCTGTTTGGGGCGAGTTCTTTGGCCTATTCGGCTTGCAGTTTGCCAGACATAGAGGTCTTAGAGAGATGATTGAGGAGTTCCTTCCCCATCCCCCGTTTCGGGATCAAGGAAAGTTCTTTTGGCAAGCTGGGATTTGTGCTATTATTTGGGGGCTTTGGGGTGAGAGAAACAATAGGACTTTTAGAGGGTGGGAAAGGGACACAAGTTGAGGTTTGGTCCCTTGTTAAATATAACGTTTCTCTTTGGGCGTCAGTGATGCGTTTATTTTGTAATTATTCCATAGGTCTCATCCTTTTGGATTGGAGGCCCTTTTTCTAAGGGGGCCTCCCTTTTGTTTTTTGTGGGCTGGTTTTTTTGTTCGCCCTTGTATTCTTTCATATTTTCTCAATGAAAGCTTGATTTATTATCAAAAAAAAAAAAAAAAAGAAACTTTTTTTTTTGACAAGTTATAAGAAGATAGTTGAGAAAAAGAGAATACTGAGGTTCTTTCTAGGACTTAATAAAGAGCTAGACGACCTAAGGGGAAGAATAATGGGAGCAAAAAATCTACCTCTCTTAGAGAAGCATTTACTGAAGTTCGATGTGAGGAGAGAAGAAAACACTTGATGATGCCCGAGATTGGGGCATCTACTGGACCAGAGGTTTCAACCATGTTGACACACAATTCATCTCAAGATAGCAAATCCAAGAAAGACAATCGTCCTTGGTGTGATCACTGCAAAAAAGTGGGACATGTACGAGATACTTGTTGGAAAATTCATGGCAAACTAGGAAATCAACAAAGAAAGTGACAATAGAAAACCATGCCCTTGTTACTTCTCCTTCTCCGCATTTGACAACTTCTGCAATTTTCTCGAAGGAACAATTGGAATCAAAAGACTTGAGCAAACTTCTTCCATGGCATCTTCATTACACATGAAATTCTCAGGGATGGTGGGACACGAAGGGACAGCCCCTTTTTTTCGAGTATAAAATAAGGTATAGGTTTCAATAAAGCGACGTCTAATTTAGGCTTGTTATATCTAAGAATAATGAGGAGTCACCAAAAGAAGTCTTGGACATAGAAGGCGTCTCCGGATTAAAAGTCTTTTCTTGATTAATAATAATAGGCAAATGGAAATCCTTCACATGCAGACTACCTTTGCAACAAGTTTCTTCTCATCTCAATTGTAAGATTGAAGCTTTTCCTTTTTTATACCTGGATCTACCTTTGGGAGGTCATCCAAAAAATGTTTCTTTTTGGCAGCCAAGTTTAAACAAAATTTTAATCTCTCGGGAGGTGGAAGATTAACAATTTGCAAGTCTGTTCTCTTTAATCTTCCTTTATATTACATGTCTATTTTCCTTATTCCCTCAAGTATTTGTTTGGAATTGGAACGAAAGATGCGTAATTTCTTTTGGGAAGGGAAATCAATCATCTTGTTAGGTGGAACATAGTTACTAAACCTCAGTATGATGGGGGTTTGGAAATTAGGGGTCTAAAGAACAAAAACCTTGCTTTGATTGCTAAATGGGGTTGGCGATATATCAATGAGCCTAATTCCTTTTAGAGAAAGGTGATTTATGGCATTCACGGTTCTGACTTTTGATTGACATACTCTTGGGAGATTTAATTCTAGCCTTTGCGGTCCATGGATCAACATATCAAAGTCTTGGAAATCGGTGGAAGTTTATGCTCATTTTTCATTAGGGAATGGTTCATGATTTTCTTTTTGGCATGATCCTTGGAATGGATGATTCTTTCAATCTCTGATTTTTGGGACTCTAATTGTCTCACATGGAATATATTTCTTGAAGGCTATTAAAAGAAGTTGAGGTTTCTGATTTCAATTGTCTTCTTGAAGTTTTGTAAAAAAAAAAAATTGTCTTCTTGAAGTTTTGTCAGTTGCTAAAGCCATAAGTCTGGAATACTCTCAGAAATGGTGTGTAGAAGATTCAGGCTCCTTTTCAGTTAAAAAGAAAAGAAAAACATTCTTTTAGAGCCTCCTTGTTAGGCGTTTGTGATGTTGTTCTGATTGGTTGTTCTCTTGGTTATGATTTTTGAGGCAGTGGTTTCAGTTTTATCTGCTGTCTCCACTGTTATGGGAGTTTCAATTGCTTCTAGTTTCAGTCTTATCTGCTATCTCCGCTATTAGGGGAGTTTCCATTACTTTTAGTTATTATGTTTTTTGCTTTGAGATCGATTAAGGTCACCATTTTGGTTTATTTTGCTCTAAAGTTTGCGGATACTTCTTATCAAATTGGGGCAGTTTTGTGGTTGTTTTGGCTTTGGTTCTTGCAAATCTTGTTTCTCCATTGGTTAAAGTTTCCAAGTTTTATCATGTCGTTCTTTATTAAGATTATTTTGATTTTTCCAAGTTTTTTGGATGATTCCTTATTTCCTTTGTATTATTTCTTATTTTCCCGTTTCATCCCTTTGTGGGTTTGTATCTTTTGAGCATTAGTCACTTTTCATTTTTTCAATGAAAAGTTTCGTTTCTTGTTAAAAAAGAAAAAAAAAAGCCACCATCTTCATATTTACAGCCTTCCATTTGCTCTCTTTGTTTTGAAGCAGGGGAACCCTCGACCATGTTTTTTTGGTTGCTCTTTCTCTCAAGCTTGTTGGTTCAAAGCATTCAGATTATTCAATTTGTTGTGGGTTTTCTATTCAAAAGCCAAAAGCAATGTTTTTCAGGTTCTATTGGGTTTCTCTTTTCCCTTGTGTTCTCATTTGCTTTGGGTCAATGTGGTAAAGACTTTGACTTAAGATCTTTGGTCTGAAAATAATCAGAGGATTTTTGAAGACATACATTGTTCTTGGCTATAGATCGTTTTGAGTTAAGCTCATCTCAAAGCCTCTCTTTGGTGTTATTTTTCTGACTTTTTCATTGGTTTTTCTTTATAGGATATTAATTTAAATTGAAACGCTTTCGTCTATCCTCTGCAACTCTATTTGTTTTTATTTTTACTTCGTTTAGAGTTTGTATTATTTGAGCATTAGTCTCTTTTCATTTCTTCAAAGAAAAGTTTCGTTTCTTGTTCAAAAAGATTTTTCTTTTTTTGTATTAATTTTAGGTTAAATTACAAATTTGGCCCTATGGTTTGGAGAAATTTAGAGTTCTGTTGGAATTCCTTGTCTTTACAATTGTGTAAATGTTTCCTATCAATATTTAGTCATTATTGTTTTTATTCTTTTCTTATATTGTAGTGGGTCTTTCTCCTATATAAGAGGACCTTGGGTGCACATATTTGAATAACAAACCATTCTTCTCCTAAATTTAAGAAATTCACTTCCTATTGTTTTAGAAATTAGAATTTAGTTCATGTGGTTTGATAGTCTCTACCATTAGAAGCCACTAACGGATTGAGTATGTGACAATTATCTATCTTGTCATGTACTCAACCTTTAGTGGATTATGGGCATGTAGACTATTTATGAAGTTTTATCAAACTAGAACTAAAGTCAACTTCAAATTTGTAATTTAAACTTTACCAACTTCCATTTAGTGAAGTTTATTTAAAAAATTCAGTGTCTTGTTATACACATCTAACTAGTTGTCTTGTTTTCATGCATGAAAGATGTTTTTTGCAACTTCTATCCTTCATGTGCACCTTATGCAATGGTATGATGATAATTCTGTCGAGCAAGCTGTTAACAAATGTCACGAGGTCTGGGAATCTATTGAACCTGATAAAGTAAGTGGATTTCTTCCCTTCTTCTATGTTCTCCCTAACTGTATGTCAGTAACACAACTTCTAAAGATGAAAATGCTTATCTATCTTCAAAAATATATTTTTTTGTTCTATTTGGAATTATTTGTACACATTTACTTATTATTTCTTCACTGCTTGGCATGCCTTTACCTCTCCAATAAAGAGACAACAGTGTGTTGGTTTATTATTTTACAATGAGCTGCTGCACATATTTTATCGACTTCGGATCTGTGACTACAAGAATGCTGCTCAACATATAGATAAATTAGATGCTGCTATGAAGGTTGATTTGCAACGAACACAATACATAGAGGTTTTGACTAAAGAAATGAATGCCTTAAATCAGAGTCTCTCCAGGTCTGATCTACATCATAAAGATAGGTTGGCTCTCACTGAAAAACATGCTCAGCTTCAGGATCAACTTAGAAGTATGATTAGACCAACTTCCGTAAGCAAAGAATCTTTGGAACCTGGACATTTTGGAAACATGAGAAGAACATCCAGGGACAAGCTTGAGTTGGCACCATATCCTATTGACGGGGAGTGGCTACCAAAAAGTGCTGTTTATGCACTTGTGGATCTTATGGTTGTTATCTTTAGCCGGCCTAAAGGACTTTTCAAAGAGTGCGCAAAACGTATTCTATCTGGAATGCTTACCATCCAAGGTAAATATTTTAGAATGTTCATGCTTTAACTACTACTGAATATAAGTTTGTCGTTTGATTAACACTAATTAGAGAGCTTTTTGGTAAGCTCCTTAGCGATCAGAGGGTGGTAGGATTTTTTTGTCTTCCCTTTTTCCTTTTTGCATGGTTGCATGTGCTTCTGTGTTCACTGAGATGCTTCTTGTCCAAATAGATAAACTAGAAAATGAGGTAATGGCTTTTGATTTTTAGTTTTCCAATTGGTTAATTAAAAACTGTGAAAATGAATTCTGTTGCCAATACCACCTTGCCACATCAAAGTTTCCTCCTAGTAAGGGTACATGCCAGCTTGGTTATTGTGCAAAATCAAAATTTGAGTCGAACCAATTACTTGGTGAAGGAAAAATGAAAACCTAAGCCGAATCACCGTGATGTTGAAATCGCGCCAACCAAAACCCTTTTACCAACGGTTTGGTCGGCTCGGTTCGCGGTTCGCCATTATAAGGTTGTGTGTGGGCCGTGTCTTTCATCTTTCTTGTTCCTTCTTTTTTGAATTTGATTTCACAACGACGTGTCATTCTCTCTTCTCTGAGAATCGAAGAAGACGAAGTTGTGAACAAGAAGAAGGCGTGGGTTAGAGGGATGAGTCGATGAATTGTTCTCTCTTCTCTAAGAATCAATTTGATTTTAGGTGACGGGCCCGATGTGTTAAGGTTCCAGTTGAGTTTACTGATAGTGGGAGATTCTTGTGGGTTTTCTTTTCAATGTTTATACACTTTGAAGGTTCGAACTTGAATGTTGACTCGATTATGTGGGAGTGGGACTATGGCTGTGGGTTTTTATAACGGAAGTTTGAACAAAATCAATGTAAATAGGAATATATTTTTACTTTTTTTTTTAAAATAATAGACAAAACTTTTCATTGAAGAAATGAAAATAGACTAATGCTCAAAAGTACAAACTCTGCAATGGAGTGAAGAGAATAAGCAAAACTTAATAAAAAATTACATAGAGAAAATGAAAGCATGCCAGTTAAGAGAAATATCATATATCGAAAAACCATAAAAAAGCTTGGGTAGAGAACACCATATGGAGGCCTTCAAACAAGCAAAACCAAAACAAGAAGACCACGAAAGTAACTTGTCTTAAAAAATTCTTTGATTTCTTTCTGGCCATAATTTCGAGAGAATAGCTTTTACCGCATTGAGCCAAATAAGATTAGACTTCGGAGCCAATAAAGGACCAATATGTAGAACATTATCCTTTAAATTATTAGAAAAAACCCAATCCATGTGGAATATAGGAAAGAGCTTGAAGAACCCAACCCCCCCCCCCACGCTCTCGTGTTGGGTTGAAAGCATGATTGTTGATATTCTACAAATTCAAGGTGCATATGCATTTCTTTAAACAGGTTCATGATGATAGTGGTACTATTCGTTTAGAAAAAAGAAGATTTTTTTCAGATTGGTTTATTGAATGTACTGTGTGGCCACCTTCCGACTTCATGGAAATTAATAGTTGTTGCATTCAGAGTCGATTTTTTAGGGTTTAGGATTATGGGGTTTTGCATTCAAGGTCCAAGGGATTTGAAAAGTCTTTTAAAAATAAATCACCATGAACAATTTTGGGACGGTCCACACCATCAACATTATCAAATTGAAGAGATAAATTTCCACACTTTCTATCTATAACTTCAATTGTCCCTGGAATGAAACCACACAAATTCCTTTTGACTTTAATTTGAGCTTCACTACAGTCCAACATATTAAAGGGTTTGAAAGGAGATGCATACTAAAGCCCCAAAATGTTCTCCGATGGCTTTGAAAGAGCTACATTTCTGATAGGGAAGAGGTAGGTTTTTAATTGTAATCCAACCCCCATGTCCTTTGATAACATCTAGGTGAGAATGCTTATCACAATCCCATTCTTCAATAATCAAATGTAGATCTCCATAAAGATGCCATTTACCACAAAATTAAAAAAACTTGGGAACTTTTCATCTACTTTAAGCAAAGCCTTATCAACCATGAAGGGATTAATCAAGACTGAAGTCTGAAAATTTTCTTGCTAAGTTGTCTTGATCTCCTTCCAATTGTAGTGCTCAAACAATCTAGATACAACCAAAATTTTGCTAAATTCCATATTCACTACTTCCTGATCTTTTCTAACCCAACATAGCTCTTTGAAGGATTCTTTGAAAACTTAGCGAAAGGATTTTTCAAACTTTGCTACCCTTTCACATTCTTCATCAGAGCATCATCACAACATCCATATAACTGTGAGAGTACTAATTAGGGATAATTGGGAAATAGTATTAGAAGGGTAGTAAGGGTATAATAGTAAATAGTTAGAGTGCCTTGGTTATAAATAGGGGAATTAGGGAGCCTTCATTCTTCCACCGGGTTGTGAATGGTAGGAAAAGTAAAAATTTCATTAGTGCCCTGGTGAATGTTAGGGGAGAGGTTGTTAGGGAGGCTAAAGAGATAGAGGAGGAGATTTTCTCTTTTTTCTCGAATCTCTATGGCCCACCAATAGAGGAAAGACCTTTTGTCGATGGAGTGGAGTGGAGCCCAATCTCGGAGGAAAACAAAAGGTTTCTGGAATCTCCTTTCTCAAGTGAAGAAATAAGGAGGGTTATCTTTGTTGAGCGTGATAGGAATAAATCTCCTGTTCCTGATGGTTTTTCGATGGGTTTCTTCCAAGAGAATTGGGATAGAGTTAAGCTGGATTTAGACAGAGTTTTCTCAGAATTTTATGAAAGAGGTGTTATTGATAAATTGATGAATGAGACTTTTGTTTGCCTCATCCCGAAAAAAGAGAAGGTGAAAGACTTTAGACCCATCAGTTTAATTACAAGCGTTTATAAGATTATTGCGAAGGGTCTTGGCAACAGGTTGAAAAAGGCCCTCCCACGATTTCGGAAGCCTAGGGAGCTTTTGTAGAAGGAAGACAAATTCTAGATCAAGCCTTGATAACCAATGAACCCATTAAGGATTATAGACATAGCAAGAAGGAAGAAGTTATTTTCAAGATTGATTTTGAAAAAACGTATGATCATGTGGATTGGGATTTCCTAGATAAGATTTTAGCTCAGAAAGGGTTTGGGTACCGTTGGAGGGCATGGATGTGGAGCTGTGTGAGATTTGTTAGGTACTCCATTATCATAAACGGTTGTCCCAAGGGTAAGATTGTTGCTTCGAGAGGTCTGAGACAAGGGGACCCTCTATCCCCATTCCTCTTTTTACTGGTGGTGGAAGCTCTCAGTAGGATGGTTTCTAAAAGTGTGGAGGGAGGCCTTTTGAAGGGGTTTGAGGTAGGCAGGGGTAGGGTGTCGTTATCCCACCTTCAGTTTGCTGATGACGCTATATTTTTCTGTTCGGGGGAGGAGGATTCCTTCTTGTTACTAAACCATATCTTAGCCTTTTTTGAGGCTATGTTGGGGCTTAAGATAAATAAAAGCAAATGTTAGGTCATGGTTTAAACTATTGCTCTGAGAGGGTGGGAAGACTAGCTAGCCTTGTAGGGTGCGATGTTGGGTCCTTCCCCTCCTCATATCTGGGCCTCCCTCTGGGTCACAATCCCAAAAAGATAGATTTCTAGTACCCAGTTGTGGATAAGGTGAGAAAGAGATTAGCTTCTTGGAAAAATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGTAAGGGGGAAGAGTGACCATCATTAGATCCGTGCTTAGTGGCATCCCAGTTTACTTTATCTCCTTGTTTAGAGCTCCCCATGCGATATGTCAGCAGTTGGAGAAGCTCATGAGAGATTTCCTATGGAGGGGGGGAGCTCACCTTGTGAATTGGAAGACAGTGGGGAAGCTGGGGAAGCTTGTGGGTCTTGGCGGTCTAGAATTAGGGAATCTGAGACTGAGAAATAGAGCCCTGTTAGCAAAATGGTTATGGCGATTTCTGCTTGAGTCGACCTCCTTATGGCACCGGATTATTGTGAGTAAGTATGGCTATCATCCCTATGAGTGGCTTTGGTGGGGCTAAAGGCATGTTTAGAAACCCTTGGAAATAAATTACCTTCGAGCTCCCAGTTTTTTCTACCTTGATTCGGGGTGGGGTGGCCGGTGGGAGATGGGAGGGATACTTATTTTTGGGAGGACATTTGGGTGGGGGATTGTCCCCTCTGCTCTACTTTTCCTAATCTCTATCAATTGTGCTCCATGAAAAACAGGATGATTTCTGAGGTTGTAGTCACTTCCGGGAGCTCTCCCATTTTTTTCCTTGGGTTTACATCGTTCTTTAACCGATAGGGAAGCGATGGAGGTTGTTGCTCTCTTGTCTTTGACTGAGGAGCTTCAACTTAGGGGAGGGAGAAGGGACATTCGTTGTTAGAGTCTTAGCCCGTTCAAAGGCTTCTCTTGTAGATCCTTTTTTCAATGGTTGCTTAGTCCCCCCTCATAGCGAGTCAATTTTTTCTACTCTTTGGAAAGTGAAAGTTCCTAATAAGATTAGATTTTTTATCTGGCAAGTTCTCCATGGTCGAGTTAATACTTTTGACAAGCTTGCAAGGAAGATGCCTTCGTTGGTTGGGCCTTTTTGTTGTATCCTTCGCCGGAGGGAGGAGGAAGATCTGGACCACATCCTGTGGAATTGCACCGTTGCACGTTCTGTTTGGAGTTCGTTCTTTGAGGCTTTTGGGTTGCAGGATAGAAGCTTCAAAGACCACAGGGAAATGACCGAGGAGTTCCTTCTCCATCTGCCTTTTAGAGATAAGGGGAAGTTGCTTTGGTCTACTGAGGTGTGCGCGGTCTTGTGGGGATTATGGGGAGAGAGAAATAATAGAATCTTTAGAGTATTGGAGAGGTCCCCGCCCGATGTGTGGGCCCTCACTAGATTCCATGTCTCTCGGCTTCGGTTTCGAAGGTCTTTTGTAATTATTCGTTAGGTCTTATTAACCTTGATTGGAGCCCCTTTCTTTAGCGGGGTTCCCTTTTGTGGGCTTGTTTTTTTTGTGCCCTTGTACTCTTTCATTCATTCTCAATGAAAGCTGGTTTTCAATAAAAAAAAAAAAAAAGAGGTGTGGAGAATTTTGAGTGTAGTCTCGTAGTGAGGCTTTGGGAGAGAGTTAGCCCTCTCGAAAGGCTATCGGTTATATATTGTAACTTCTTTTGATATTGCAATATATATAATTTTGTGTTTTCTTAGTTGGATACCTAACAATAACCTCGAGGAAAGAGGGGCAAAATTTTCAACCATTGATGAACCTGAAGCTTTCTCTTGGGATTTAAGAACATCGTGTAACATCTCCTAAAGACAAACCCTCCTTTCTTGTCGAAACCCATAGGAACTTGAAGAACCTTTCTTCCTCCAGAAGGTGGCCACACAGTACATTCAATAAACCAATCTGAAAAAAATTCTTCTTTTTTCTAAATGAATAGTACCACTATCATCATGAACCTGTTTAAAGAAATGCATATGCACCTTGAATTTGTAGAATATCAACAATCATGCTTTCAACCCAACACGAATGGGAAAAAGAGAGAGGGAGAATCAACTTGTTCTTCATAACCTGAACAAAAAACTTATCTTCTGTGAGCCAAATGCAGAAATATTGATCGTTAGCACAACAACTACACACTTCCATGATAAATAGGAGAACAAATCTAAAAATGAAAAAAACTAAAGGGAAAACTTAACTCAATGGGCAGAACCTGAGGATGCAGAAAACTTTAGGCTGGAAAATGCAAACCAAAGAGTGGAACAAAACAACTGAAGGCTTGAGGTTGAAGGTTTGAGAGAGGAGAGAGCATTTTCTTTTTTTTCTTTTTTTTGGGGGGGGGGGGGGGAATAGGTGAGTTCAAATTGTTCGACAGAGTTACAGAAGATGAGGTATTGACTGGACATTTGAAAAGAGCCAAACTTCTTCCACTTTCCAATATCTTTAAGAACATTCCCATCTTCCATCCAAAGCAAAGCTTTATCATACATTCATACATAAAAGAATTGACTGGAAATTCCACTTCAAAAGATTTTTCCAATTTTTTTCTTCCTTTTCTTTATCGAAACGGATCGAACTTGCGACATGTGGAATGCACTGAGACATCCCAGTTCCCCCACTAAGCCAACAAGCTACGAAAGGTTTTTCCCAATTCCAAAGAAATTCTTTTCCGGTCATCATGAGCAGTCATCCTTGTAACCACCATTGCAGACCCCAATCAACCTCCACCACTTCTTTTTCTTTTTTAACCTAGTAAGTGTGAAGAGAATGTGCATGGACCTTTGTCAAAGCCTTCGATAAAGAGTCCAAAAATTGGCTATTACTCCTTACCATTATTGATGATTTGGTGGTCTTTAAGACCAAAACTTCTTTATGATTATTTCCATCTTTCGAGCTTTTAATCAAGGCATCTCGAATCGTTTCCCAGAAAAAAAATTCAACTTATGAGAAAATCAAGCGAAGGAATTGAAGCGGCCTCTCAATTAGCCTGATACCTAATGTTTTAGACAATCCAGTTTTGGGCGTACAATGATTCACGGAGTTATACTTTTTGTTTTTTTTTTTAAAATTCCGAATGGGTTCTTTAGCAATTCAATGTTTCTTGTAGAAGTTTAGTTGAAACTGATTTTGACATTGAAAAAATGATATGTTTCTTGCAGAGGAGTTGATGAAGCTTGGGATAACTGATGGTGTAAGAGGTAAGACTTGGAAGTTCGAATATTATCCATACTTCTGCTTCTTAGTGCTGAATTTCATTTGTTTATTTTTCAATGCATATTGTGTAAAAATGAAAAAATGAGTTTCTTCCATGGAAATTCTTTGCGACTGTTTAACCTGCCAGTTTGTTTTTTCCCAGTAGACTTCCTTATTGTTGTATTTAACCTAAATTATTCAAAATGCCACTTATGACTTAACTTTGAGGTTAGTTCAAATATACCCCTATCGTTTAAAAAGTTTCACTTCTACCCTATCTTTAAGATTGATTCGACTATGCTTGTAAGCAATGTTATAGTTGAAAGAAGTAATGGAATTGGCATGGTTGTTGAGTTGTAAACAGAGCAAGTGGCAAAAGTAGCTTTTAAAAAATGAAAGACAATGTGACAAGTATCGGTAACCATTAGGCAATCACTTAAAAAGACAACATTTCTTAAGCTCCTCTCCCTAATGATTGTCTAGTGGTTATTGGTACTTACCACGCTTGTTGTTCATTTCTTAAAATACTATGTTTACAATTTATAGCAATAACATCAATTTCCATCACTTCTTTTAAGTGTAAATTTTACTGGGAAATAGTTGAATCAATTTTAAAGGTTAAAGGGGAAGTGAAGCGTAGTATAATTGAAACTAACCTCAAAGTTCAGGGATATTTTGAATAATTTAGCCTTGTATTTATCTAATTAAAATTTGACGGGTTTGTTAATTATTTTACCAACAATCTTGTTAGGGTTAAAAATTATTATTACCAATTTAATCTTGTTTCAATGCTACTTGAGAGAACTATATATTGCACATTTAGTTTATGGCCAAGTTGGTCAAGTATATTATCTAAATAGTTTTGAATAATATCTTATGCAAGCAAAATATTATAAGATATTTCTCAACCCCCACATGATTCCATATTTTTACTAGTAAACTTTACTTTGGTTCTCAAACTGCTTTTGGTTATATTCACTTCCCCTACTTCTCCCTTCGTAGCCTTCATATGAAATCAATTCAGACTTCCTTATTCAAGTTCATTTCTTCATCTTCTCCATCTAATTTGGTTTCTTTTAAGTTTGTTTAGTTGTTTCTTGAGATTTTGGTAGTTGAGTTCTTGTGTTGGAGAAAACATGGAGTTAAGCGGTTGTTGTGTGAGCAAGAAGTTCTTCTCTATCCTTCTTTCAAATAATAAGTTTTTTACAATCGAATAAAAGTTTGCCTCCATTTTTATTCATCTTAGGCAACTCCTTTGGTTTGTAGAAGCCTTAGTCAACCTCATGCAATATCCGCTGAATGCTCACTTCTTCGAACATGCCAAAGGTGATTTTGGGATAAGTAGATTAGTAAAAAAAAAAAAGAAATTATTTTGGTTGGATCTTTGAATGCATCTCCATCAATAAGTATTTGGGCAAGAGACACAAGAGGTTGACATGTCTAGTGGGAGATGATTTGTGTTCGTGATGCATTATGTGAAAGTTTTCCAAGAAAGATTTTGCAGCAAGGAGTATTGGATTTGAAGACCTTTAAAAGTTATAGAGGAAATTTTCTAGGGAGAGCATTCTACCAAGGATTTTCATGTCGATGTGGTTAATAGGAGGTCTCAAAGCTCTTCATTCTTTTTAGATCCTTTGCTAGTGTCGAAGGGCCTTGCCTCTTAGGCTTTTTGGGTCAAGAAAGAAAGAGAAGTTGTTGAGGTCGATTGGGCTTCTACAATGGTGATTACAAAGATGAATGCTCATGATGATTGGAAAAATCTTTTGAAGTGAAATTTTCTATTAATCCTTTTTTGGATGACAAAGCTTTGCTTTGGATGGAAGAGGGGAGAGTTCTTAGAGACATTGGAAAATGGATGAATATTGGTTCTTTTTATGTGAAAATTGAGAGATGGGAAGATGAAAGCATAGTATCCCTAAGTTTAATATTGGTTACGATGGTTGGATTAAGATTTTTGATTTACCTTTGAACTACTGGACTCAAGGTGCTTTGAAGCTATTGGTTGTCATTTTGGTGGACCCATCAATTTTTCTTCCAAAACCTTGAAATAGATTGAATTGTAGATTGATAACGATTGAGGTTAAAAAGAACCTCTGTGGTTTTATTCTTGCGATAATTGAAGTTAAATATAGAGGTGACCCTAGGGCATTGTTGCTGTCTTGTAGGTGACTTTAATGTTACTCGATCCCCCTTTGTAAAGGCATCATTGGGTGGTAGGGTGATAAGATCTATGAATAAATTCAATGAGCTTATTGAGGGTTGTAGGTTGTAGTTTTTTTTACCCTCTAGTGAACGGGAGATTCACCTAGGCCAATAGTTCACACCAGCCTCTTATTCGATTAAAATCAATAAGTCCTTTTTTCTCCAAAGCATAAGTAGTTTAGATTTAAATCCTTTTGAAGATGAGGTGGTCCCTCCCAATGAGGGCACTATTCTTGGAGATGTGAGCCCTCTTTTTCTTGATCAATTTATTGTTGTGGCAAAGGATTTCAATCATGAAGATTCTCCTAACAATAGATCTCATTTGGATTTAAAGGAATTTAGAGATGATCATTCCTCCAATAATCTTTTAGGGCTTGAGAAGTTTTCTTCTTTTATAGAGAGATGTGGTTTTGAAGTGTATGAAATCCCTTCTCATTCTCCCGCTATTGCAAGATAGCTTTTGTTTTCTTCTAGGGCTTGTTTTCAAAGTTTCTACTTTAGTTATCTTTTGGTTTTTTTTGAAGTGTTTTGTTGTCACCTGGCTTGCGGTCTTTTGTGGATATGTCGTTGGTTTCTTTTGCTTCTTGAGGCTTGCTGTTTCTTCCAGTCTCCTTTGCTTCTTGTTGTCTGCTTTTTAGTTGGTTGCAACCTCTTTGTTTTGGGTGGTTTTTGGTTATGGCTCTCTGTTTTTGGGTGGTTGTGGCATCTCTAATGTCGAGGCTGAGGTCTTTCTATACCCGTCTTTGGGGGTTGTTTTTGTTGCCATTCTCTCTTGTTTGGCGAAGGGTGGCTCTTTGTTTGTTTGCAGTGTTTGGTTTTCGTTTTTGGGCTCTTAGTTGGTATATTCTTTCCTGTTTAGGGCGTTTTTTTTCTCAGTTTTTCTTTTTTTGTTGGTGTTCTGGGATGTTTTTCTTTTTTGTTCTTTTTTCACTCCCTTATGGAGTTTGTATCCTTTGAACATTTGTCTCTTTTCATTCCATCAATGAAAAGTTTCGTTTCTTGTTTTGAAAAAAGAATAATAATAATCTTATAAATGATTAACTCTATGAAATTTTGTGTTTAGCAGAAGTCAGTTTGCAACACTCTGCCATATGGATGGCTGGCGTTTATTTAATGCTCCTTATGCAGCTTCTTGAAAACAAAGTAGCCATTGAGCTGACACGTTCTGAATTTGTTGAGGCACAGGAGGTAAGGACTAGGAAATTTTATTCATCCATTAGTGCTCTTATTTTCTACTGTGCTCCGTGCCATCTCTCTCACTCTCCATTGTGCATGTCTTGAGTTAAGTCTTTGCTTTTGCTTTTGCTTGTGGCCTTCTAAAGGTTTTCATGAATTCCAACATACACTTTTCACTTTTGTTGCAAGAACTATCTCCAAATGATATAAAATGATGTAAGCTGATGTCCATTAGTTGTATTTTGTTTGTGGTTTTGTTGGAGTTTGTTTTGTTAGCTTCAGAACTTTATAACTAGGGTATATAAGAATATACTGTTGAAGTTAAAGATAGGTTGCTTGGGAACTTTTGTTTAAGCTATGGTGATATTTGTCCTCTGGACCCTCCAAATATACTTTCTCGTAAGTTATCCATCAACGACTTAGATAATTCTTTAGACTTATTCAGATTACATAGGGTTATGGATGATGAAGGGGTTTATGTTTCTGAGGATCAAAGAAAAGAAGATGGTTTTTTCAAAATCGTTTTTGAAGATCTGTTGAATATTAAGAAAGTTAACTTTTTGAGGATGGTTGATGAACTACCATCAAATAAGGGCTTCTCAATGGTTGAAATCAGTAATCAGATTGATCCTTTTGGAGACCATTTGCTGTCCTCTGAAGGTGATTTAAGGGTTTTTGGGAATGATCCTCTCTCCAAAAGCTTTTTCTATGGATGATTGCTATAATAAGAATGGTTTGAAAAGTGAGGCAATAAATTCTAGAAACATTGAAAGTGATCATATTCAAAAGATGATTTCTATTCCTCATTCGGTTATTGACAACACTGTTGATGAATCAATGTCTAAGGTATCTCTTGACAATCTCACAGAAGTAATGGAAACCGTGGCCCCTCCTAGTATTAAAGAATCAAGCTTTTGCTCTGATAAGGCATTCTCTAAAGTATATTCTAGGAGAAAAGATCTTCAGCCTTCACTTCCAACTCAAATTATCTCTTCTCCTTTAAATGCTGACACTTTAGAAGAATCTTGTGCGAAACTCTTGATTCTAGTTGATAATTCAATTCCAGAGGATAATTCACAGGTTGTCTCTTCAAAGCTTCTTGTGGAAAATTGTAACATTAGGTTTGATAGTGTGCTTGTGGAAAATTGTAACATTAGGTTTGATAGTGTGCAGTTTACCTATTATTTGCTCTTCGATTGTTGTTGATTCAAACGATGAATTTGAGGTTAGTGTAAGTAGCGTGGAGATTGAGGTTCCTCATCTTCTTAATATCTCTAAAAATAATTCGCCTGACGATGATGACTTTGTTGATTTCAATAGTTTTTTCCATACGCCCACCGAGTCAAATAATTCTTATTCTAATGGTTCAAGGAAAAGTCAGTCTCCAATCAATGAGAAAGTAGCAGAATCTAATCAGTTTTCTTCTTTAATCAGAGCAAGTGGCCTTCAATTCCGTGAAATTCTCCCTCTTGCTTCGGGAAGGGTCAATTAG

mRNA sequence

ATGGCGGAGGAAGACCTTGACCATATTTTGTGGAGATGCGATTTTGCTACGGCTGTTTGGGGCGAGTTCTTTGGCCTATTCGGCTTGCAGTTTGCCAGACATAGAGGTCTTAGAGAGATGATTGAGGAGTTCCTTCCCCATCCCCCGTTTCGGGATCAAGGAAAGTTCTTTTGGCAAGCTGGGATTTGTGCTATTATTTGGGGGCTTTGGGTGGTTTCAGTTTTATCTGCTGTCTCCACTGTTATGGGAGTTTCAATTGCTTCTAGTTTCAGTCACCATTTTGGTTTATTTTGCTCTAAAGTTTGCGGATACTTCTTATCAAATTGGGGCAGTTTTGTGGTTGTTTTGGCTTTGGTTCTTGCAAATCTTGTTTCTCCATTGGTTAAAATGTTTTTTGCAACTTCTATCCTTCATGTGCACCTTATGCAATGGTATGATGATAATTCTGTCGAGCAAGCTGTTAACAAATGTCACGAGGTCTGGGAATCTATTGAACCTGATAAAAGACAACAGTGTGTTGGTTTATTATTTTACAATGAGCTGCTGCACATATTTTATCGACTTCGGATCTGTGACTACAAGAATGCTGCTCAACATATAGATAAATTAGATGCTGCTATGAAGGTTGATTTGCAACGAACACAATACATAGAGGTTTTGACTAAAGAAATGAATGCCTTAAATCAGAGTCTCTCCAGGTCTGATCTACATCATAAAGATAGGTTGGCTCTCACTGAAAAACATGCTCAGCTTCAGGATCAACTTAGAAGTATGATTAGACCAACTTCCGTAAGCAAAGAATCTTTGGAACCTGGACATTTTGGAAACATGAGAAGAACATCCAGGGACAAGCTTGAGTTGGCACCATATCCTATTGACGGGGAGTGGCTACCAAAAAGTGCTGTTTATGCACTTGTGGATCTTATGGTTGTTATCTTTAGCCGGCCTAAAGGACTTTTCAAAGAGTGCGCAAAACGTATTCTATCTGGAATGCTTACCATCCAAGGTGACGGGCCCGATGTGTTAAGATCCGTGCTTAGTGGCATCCCAGTTTACTTTATCTCCTTGTTTAGAGCTCCCCATGCGATATGTCAGCAGTTGGAGAAGCTCATGAGAGATTTCCTATGGAGGGGGGGAGCTCACCTTGTGAATTGGAAGACAGTGGGGAAGCTGGGGAAGCTTGTGGGTCTTGGCGGTCTAGAATTAGGGAATCTGAGACTGAGAAATAGAGCCCTGTTAGCAAAATGGTTATGGCGATTTCTGCTTGAGTCGACCTCCTTATGGCACCGGATTATTGTGACTCCCAGTTTTTTCTACCTTGATTCGGGGTGGGGTGGCCGGTGGGAGATGGGAGGGATACTTATTTTTGGGAGGACATTTGGGTGGGGGATTATGCCTTCGTTGGTTGGGCCTTTTTGTTGTATCCTTCGCCGGAGGGAGGAGGAAGATCTGGACCACATCCTGTGGAATTGCACCGTTGCACGTTCTGTTTGGAGTTCGTTCTTTGAGGCTTTTGGGTTGCAGGATAGAAGCTTCAAAGACCACAGGGAAATGACCGAGGAGTTCCTTCTCCATCTGCCTTTTAGAGATAAGGGGAAGTTGCTTTGGTCTACTGAGGTCTTATTAACCTTGATTGGAGCCCCTTTCTTTAGCGGGGTTCCCTTTTAG

Coding sequence (CDS)

ATGGCGGAGGAAGACCTTGACCATATTTTGTGGAGATGCGATTTTGCTACGGCTGTTTGGGGCGAGTTCTTTGGCCTATTCGGCTTGCAGTTTGCCAGACATAGAGGTCTTAGAGAGATGATTGAGGAGTTCCTTCCCCATCCCCCGTTTCGGGATCAAGGAAAGTTCTTTTGGCAAGCTGGGATTTGTGCTATTATTTGGGGGCTTTGGGTGGTTTCAGTTTTATCTGCTGTCTCCACTGTTATGGGAGTTTCAATTGCTTCTAGTTTCAGTCACCATTTTGGTTTATTTTGCTCTAAAGTTTGCGGATACTTCTTATCAAATTGGGGCAGTTTTGTGGTTGTTTTGGCTTTGGTTCTTGCAAATCTTGTTTCTCCATTGGTTAAAATGTTTTTTGCAACTTCTATCCTTCATGTGCACCTTATGCAATGGTATGATGATAATTCTGTCGAGCAAGCTGTTAACAAATGTCACGAGGTCTGGGAATCTATTGAACCTGATAAAAGACAACAGTGTGTTGGTTTATTATTTTACAATGAGCTGCTGCACATATTTTATCGACTTCGGATCTGTGACTACAAGAATGCTGCTCAACATATAGATAAATTAGATGCTGCTATGAAGGTTGATTTGCAACGAACACAATACATAGAGGTTTTGACTAAAGAAATGAATGCCTTAAATCAGAGTCTCTCCAGGTCTGATCTACATCATAAAGATAGGTTGGCTCTCACTGAAAAACATGCTCAGCTTCAGGATCAACTTAGAAGTATGATTAGACCAACTTCCGTAAGCAAAGAATCTTTGGAACCTGGACATTTTGGAAACATGAGAAGAACATCCAGGGACAAGCTTGAGTTGGCACCATATCCTATTGACGGGGAGTGGCTACCAAAAAGTGCTGTTTATGCACTTGTGGATCTTATGGTTGTTATCTTTAGCCGGCCTAAAGGACTTTTCAAAGAGTGCGCAAAACGTATTCTATCTGGAATGCTTACCATCCAAGGTGACGGGCCCGATGTGTTAAGATCCGTGCTTAGTGGCATCCCAGTTTACTTTATCTCCTTGTTTAGAGCTCCCCATGCGATATGTCAGCAGTTGGAGAAGCTCATGAGAGATTTCCTATGGAGGGGGGGAGCTCACCTTGTGAATTGGAAGACAGTGGGGAAGCTGGGGAAGCTTGTGGGTCTTGGCGGTCTAGAATTAGGGAATCTGAGACTGAGAAATAGAGCCCTGTTAGCAAAATGGTTATGGCGATTTCTGCTTGAGTCGACCTCCTTATGGCACCGGATTATTGTGACTCCCAGTTTTTTCTACCTTGATTCGGGGTGGGGTGGCCGGTGGGAGATGGGAGGGATACTTATTTTTGGGAGGACATTTGGGTGGGGGATTATGCCTTCGTTGGTTGGGCCTTTTTGTTGTATCCTTCGCCGGAGGGAGGAGGAAGATCTGGACCACATCCTGTGGAATTGCACCGTTGCACGTTCTGTTTGGAGTTCGTTCTTTGAGGCTTTTGGGTTGCAGGATAGAAGCTTCAAAGACCACAGGGAAATGACCGAGGAGTTCCTTCTCCATCTGCCTTTTAGAGATAAGGGGAAGTTGCTTTGGTCTACTGAGGTCTTATTAACCTTGATTGGAGCCCCTTTCTTTAGCGGGGTTCCCTTTTAG

Protein sequence

MAEEDLDHILWRCDFATAVWGEFFGLFGLQFARHRGLREMIEEFLPHPPFRDQGKFFWQAGICAIIWGLWVVSVLSAVSTVMGVSIASSFSHHFGLFCSKVCGYFLSNWGSFVVVLALVLANLVSPLVKMFFATSILHVHLMQWYDDNSVEQAVNKCHEVWESIEPDKRQQCVGLLFYNELLHIFYRLRICDYKNAAQHIDKLDAAMKVDLQRTQYIEVLTKEMNALNQSLSRSDLHHKDRLALTEKHAQLQDQLRSMIRPTSVSKESLEPGHFGNMRRTSRDKLELAPYPIDGEWLPKSAVYALVDLMVVIFSRPKGLFKECAKRILSGMLTIQGDGPDVLRSVLSGIPVYFISLFRAPHAICQQLEKLMRDFLWRGGAHLVNWKTVGKLGKLVGLGGLELGNLRLRNRALLAKWLWRFLLESTSLWHRIIVTPSFFYLDSGWGGRWEMGGILIFGRTFGWGIMPSLVGPFCCILRRREEEDLDHILWNCTVARSVWSSFFEAFGLQDRSFKDHREMTEEFLLHLPFRDKGKLLWSTEVLLTLIGAPFFSGVPF

Homology

[Close]

BLAST of Spg005806 vs. NCBI nr
Match: KAA0052897.1 (MAU2 chromatid cohesion factor-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 393.7 bits (1010), Expect = 2.7e-105
Identity = 193/215 (89.77%), Postives = 206/215 (95.81%), Query Frame = 0


Query: 121 ANLVSPLVKMFFATSILHVHLMQWYDDNSVEQAVNKCHEVWESIEPDKRQQCVGLLFYNE 180
           A +  P ++MFFATSILHVHLMQWYDDNSVEQAVNKC EVWES+EP+KRQQCVGLLFYNE
Sbjct: 150 AEICYPELQMFFATSILHVHLMQWYDDNSVEQAVNKCDEVWESMEPEKRQQCVGLLFYNE 209

Query: 181 LLHIFYRLRICDYKNAAQHIDKLDAAMKVDLQRTQYIEVLTKEMNALNQSLSRSDLHHKD 240
           LLHIFYRLRICDYKNAAQH+DKLDAAMK DLQ+TQYIE LTKEMNALNQSLSRSDLH+KD
Sbjct: 210 LLHIFYRLRICDYKNAAQHLDKLDAAMKADLQQTQYIEDLTKEMNALNQSLSRSDLHYKD 269

Query: 241 RLALTEKHAQLQDQLRSMIRPTSVSKESLEPGHFGNMRRTSRDKLELAPYPIDGEWLPKS 300
           RLALT KHAQLQ+QLRS+ RPTS+SKESLEPGHFGN+RRTSRDKLELAPYPIDGEWLPKS
Sbjct: 270 RLALTGKHAQLQEQLRSITRPTSMSKESLEPGHFGNVRRTSRDKLELAPYPIDGEWLPKS 329

Query: 301 AVYALVDLMVVIFSRPKGLFKECAKRILSGMLTIQ 336
           AVYALVDLMVVIFSRPKGLFKEC+KRILSGMLTIQ
Sbjct: 330 AVYALVDLMVVIFSRPKGLFKECSKRILSGMLTIQ 364

[Close]

BLAST of Spg005806 vs. NCBI nr
Match: TYK11351.1 (MAU2 chromatid cohesion factor-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 393.7 bits (1010), Expect = 2.7e-105
Identity = 193/215 (89.77%), Postives = 206/215 (95.81%), Query Frame = 0


Query: 121 ANLVSPLVKMFFATSILHVHLMQWYDDNSVEQAVNKCHEVWESIEPDKRQQCVGLLFYNE 180
           A +  P ++MFFATSILHVHLMQWYDDNSVEQAVNKC EVWES+EP+KRQQCVGLLFYNE
Sbjct: 150 AEICYPELQMFFATSILHVHLMQWYDDNSVEQAVNKCDEVWESMEPEKRQQCVGLLFYNE 209

Query: 181 LLHIFYRLRICDYKNAAQHIDKLDAAMKVDLQRTQYIEVLTKEMNALNQSLSRSDLHHKD 240
           LLHIFYRLRICDYKNAAQH+DKLDAAMK DLQ+TQYIE LTKEMNALNQSLSRSDLH+KD
Sbjct: 210 LLHIFYRLRICDYKNAAQHLDKLDAAMKADLQQTQYIEDLTKEMNALNQSLSRSDLHYKD 269

Query: 241 RLALTEKHAQLQDQLRSMIRPTSVSKESLEPGHFGNMRRTSRDKLELAPYPIDGEWLPKS 300
           RLALT KHAQLQ+QLRS+ RPTS+SKESLEPGHFGN+RRTSRDKLELAPYPIDGEWLPKS
Sbjct: 270 RLALTGKHAQLQEQLRSITRPTSMSKESLEPGHFGNVRRTSRDKLELAPYPIDGEWLPKS 329

Query: 301 AVYALVDLMVVIFSRPKGLFKECAKRILSGMLTIQ 336
           AVYALVDLMVVIFSRPKGLFKEC+KRILSGMLTIQ
Sbjct: 330 AVYALVDLMVVIFSRPKGLFKECSKRILSGMLTIQ 364

[Close]

BLAST of Spg005806 vs. NCBI nr
Match: XP_008448423.1 (PREDICTED: LOW QUALITY PROTEIN: MAU2 chromatid cohesion factor homolog [Cucumis melo])

HSP 1 Score: 393.7 bits (1010), Expect = 2.7e-105
Identity = 193/215 (89.77%), Postives = 206/215 (95.81%), Query Frame = 0


Query: 121 ANLVSPLVKMFFATSILHVHLMQWYDDNSVEQAVNKCHEVWESIEPDKRQQCVGLLFYNE 180
           A +  P ++MFFATSILHVHLMQWYDDNSVEQAVNKC EVWES+EP+KRQQCVGLLFYNE
Sbjct: 161 AEICYPELQMFFATSILHVHLMQWYDDNSVEQAVNKCDEVWESMEPEKRQQCVGLLFYNE 220

Query: 181 LLHIFYRLRICDYKNAAQHIDKLDAAMKVDLQRTQYIEVLTKEMNALNQSLSRSDLHHKD 240
           LLHIFYRLRICDYKNAAQH+DKLDAAMK DLQ+TQYIE LTKEMNALNQSLSRSDLH+KD
Sbjct: 221 LLHIFYRLRICDYKNAAQHLDKLDAAMKADLQQTQYIEDLTKEMNALNQSLSRSDLHYKD 280

Query: 241 RLALTEKHAQLQDQLRSMIRPTSVSKESLEPGHFGNMRRTSRDKLELAPYPIDGEWLPKS 300
           RLALT KHAQLQ+QLRS+ RPTS+SKESLEPGHFGN+RRTSRDKLELAPYPIDGEWLPKS
Sbjct: 281 RLALTGKHAQLQEQLRSITRPTSMSKESLEPGHFGNVRRTSRDKLELAPYPIDGEWLPKS 340

Query: 301 AVYALVDLMVVIFSRPKGLFKECAKRILSGMLTIQ 336
           AVYALVDLMVVIFSRPKGLFKEC+KRILSGMLTIQ
Sbjct: 341 AVYALVDLMVVIFSRPKGLFKECSKRILSGMLTIQ 375

[Close]

BLAST of Spg005806 vs. NCBI nr
Match: XP_031738040.1 (sister chromatid cohesion protein SCC4 isoform X4 [Cucumis sativus])

HSP 1 Score: 389.0 bits (998), Expect = 6.7e-104
Identity = 191/215 (88.84%), Postives = 203/215 (94.42%), Query Frame = 0


Query: 121 ANLVSPLVKMFFATSILHVHLMQWYDDNSVEQAVNKCHEVWESIEPDKRQQCVGLLFYNE 180
           A +  P ++MFFATSILHVHLMQWYDDNSV+QAVNKC EVWESIEP+KRQQCVGLLFYNE
Sbjct: 161 AEICYPELQMFFATSILHVHLMQWYDDNSVQQAVNKCDEVWESIEPEKRQQCVGLLFYNE 220

Query: 181 LLHIFYRLRICDYKNAAQHIDKLDAAMKVDLQRTQYIEVLTKEMNALNQSLSRSDLHHKD 240
           LLHIFYRLRICDYKNAAQH+DKLDAAMK DLQ+TQYIE L KEMNALNQSLSRSDLH+KD
Sbjct: 221 LLHIFYRLRICDYKNAAQHLDKLDAAMKADLQQTQYIEDLNKEMNALNQSLSRSDLHYKD 280

Query: 241 RLALTEKHAQLQDQLRSMIRPTSVSKESLEPGHFGNMRRTSRDKLELAPYPIDGEWLPKS 300
           RLALT KHAQLQ+QLRS+ RPTS+SKESLEPGHFGN+RRT RDKLELAPYPIDGEWLPKS
Sbjct: 281 RLALTGKHAQLQEQLRSITRPTSLSKESLEPGHFGNVRRTYRDKLELAPYPIDGEWLPKS 340

Query: 301 AVYALVDLMVVIFSRPKGLFKECAKRILSGMLTIQ 336
           AVYALVDLMVVIFSRPKGLFKEC KRILSGMLTIQ
Sbjct: 341 AVYALVDLMVVIFSRPKGLFKECTKRILSGMLTIQ 375

[Close]

BLAST of Spg005806 vs. NCBI nr
Match: XP_031738038.1 (sister chromatid cohesion protein SCC4 isoform X1 [Cucumis sativus])

HSP 1 Score: 389.0 bits (998), Expect = 6.7e-104
Identity = 191/215 (88.84%), Postives = 203/215 (94.42%), Query Frame = 0


Query: 121 ANLVSPLVKMFFATSILHVHLMQWYDDNSVEQAVNKCHEVWESIEPDKRQQCVGLLFYNE 180
           A +  P ++MFFATSILHVHLMQWYDDNSV+QAVNKC EVWESIEP+KRQQCVGLLFYNE
Sbjct: 161 AEICYPELQMFFATSILHVHLMQWYDDNSVQQAVNKCDEVWESIEPEKRQQCVGLLFYNE 220

Query: 181 LLHIFYRLRICDYKNAAQHIDKLDAAMKVDLQRTQYIEVLTKEMNALNQSLSRSDLHHKD 240
           LLHIFYRLRICDYKNAAQH+DKLDAAMK DLQ+TQYIE L KEMNALNQSLSRSDLH+KD
Sbjct: 221 LLHIFYRLRICDYKNAAQHLDKLDAAMKADLQQTQYIEDLNKEMNALNQSLSRSDLHYKD 280

Query: 241 RLALTEKHAQLQDQLRSMIRPTSVSKESLEPGHFGNMRRTSRDKLELAPYPIDGEWLPKS 300
           RLALT KHAQLQ+QLRS+ RPTS+SKESLEPGHFGN+RRT RDKLELAPYPIDGEWLPKS
Sbjct: 281 RLALTGKHAQLQEQLRSITRPTSLSKESLEPGHFGNVRRTYRDKLELAPYPIDGEWLPKS 340

Query: 301 AVYALVDLMVVIFSRPKGLFKECAKRILSGMLTIQ 336
           AVYALVDLMVVIFSRPKGLFKEC KRILSGMLTIQ
Sbjct: 341 AVYALVDLMVVIFSRPKGLFKECTKRILSGMLTIQ 375

[Close]

BLAST of Spg005806 vs. ExPASy Swiss-Prot
Match: Q9FGN7 (Sister chromatid cohesion protein SCC4 OS=Arabidopsis thaliana OX=3702 GN=SCC4 PE=1 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 3.5e-63
Identity = 120/220 (54.55%), Postives = 162/220 (73.64%), Query Frame = 0


Query: 118 LVLANLVSPLVKMFFATSILHVHLMQWYDDNSVEQAVNKCHEVWESIEPDKRQQCVGLLF 177
           L  +++  P ++MFF  S+LHVH+MQW DD SVE+AV +C E+W++I  DK  +C GL F
Sbjct: 160 LSASHICFPELQMFFTASMLHVHIMQWTDDYSVEKAVQRCDEIWQTISSDKTDRCPGLFF 219

Query: 178 YNELLHIFYRLRICDYKNAAQHIDKLDAAMKVDLQRTQYIEVLTKEMNALNQSLSRSDLH 237
           YNE+LH+FYRLR+CDYKNA  H+D+LD AM     + Q I+ L  E+++LN SLSR DL 
Sbjct: 220 YNEMLHVFYRLRLCDYKNAQHHVDRLDQAMNAHSHKMQEIQQLLDELSSLNLSLSRYDLP 279

Query: 238 HKDRLALTEKHAQLQDQLRSMIRPTSVSKESLEPGHFGNMRRTSRDKLELAPYPIDGEWL 297
            ++R AL+ + +QLQD++ + + P+S +  SLEP +FGN+ R   +KL L+P PIDGEWL
Sbjct: 280 SRERSALSARQSQLQDRVNA-LSPSSSTVNSLEPAYFGNIDRGWTEKLLLSPSPIDGEWL 339

Query: 298 PKSAVYALVDLMVVIFSRPKGLFKECAKRILSGMLTIQGD 338
           PKSA+ ALV LMVVI  RPKGLFKEC+KRI SG+  IQ +
Sbjct: 340 PKSAIDALVHLMVVISGRPKGLFKECSKRIESGLQIIQDE 378

[Close]

BLAST of Spg005806 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 2.7e-07
Identity = 36/95 (37.89%), Postives = 51/95 (53.68%), Query Frame = 0


Query: 343 RSVLSGIPVYFISLFRAPHAICQQLEKLMRDFLWRGGA-----HLVNWKTVGKLGKLVGL 402
           ++VLS +PV+ +S    P +I  +L++L R FLW   A     HLV W  V    K    
Sbjct: 42  KAVLSSMPVHSMSTILLPQSILNRLDQLSRTFLWGSTAEKKKQHLVKWSKVCSPKK---E 101

Query: 403 GGLELGNLRLRNRALLAKWLWRFLLESTSLWHRII 433
           GGL +   +  NRAL++K  WR L E  SLW  ++
Sbjct: 102 GGLGVRAAKSMNRALISKVGWRLLQEKNSLWTLVL 133

[Close]

BLAST of Spg005806 vs. ExPASy TrEMBL
Match: A0A5D3CHS2 (MAU2 chromatid cohesion factor-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00010 PE=3 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 1.3e-105
Identity = 193/215 (89.77%), Postives = 206/215 (95.81%), Query Frame = 0


Query: 121 ANLVSPLVKMFFATSILHVHLMQWYDDNSVEQAVNKCHEVWESIEPDKRQQCVGLLFYNE 180
           A +  P ++MFFATSILHVHLMQWYDDNSVEQAVNKC EVWES+EP+KRQQCVGLLFYNE
Sbjct: 150 AEICYPELQMFFATSILHVHLMQWYDDNSVEQAVNKCDEVWESMEPEKRQQCVGLLFYNE 209

Query: 181 LLHIFYRLRICDYKNAAQHIDKLDAAMKVDLQRTQYIEVLTKEMNALNQSLSRSDLHHKD 240
           LLHIFYRLRICDYKNAAQH+DKLDAAMK DLQ+TQYIE LTKEMNALNQSLSRSDLH+KD
Sbjct: 210 LLHIFYRLRICDYKNAAQHLDKLDAAMKADLQQTQYIEDLTKEMNALNQSLSRSDLHYKD 269

Query: 241 RLALTEKHAQLQDQLRSMIRPTSVSKESLEPGHFGNMRRTSRDKLELAPYPIDGEWLPKS 300
           RLALT KHAQLQ+QLRS+ RPTS+SKESLEPGHFGN+RRTSRDKLELAPYPIDGEWLPKS
Sbjct: 270 RLALTGKHAQLQEQLRSITRPTSMSKESLEPGHFGNVRRTSRDKLELAPYPIDGEWLPKS 329

Query: 301 AVYALVDLMVVIFSRPKGLFKECAKRILSGMLTIQ 336
           AVYALVDLMVVIFSRPKGLFKEC+KRILSGMLTIQ
Sbjct: 330 AVYALVDLMVVIFSRPKGLFKECSKRILSGMLTIQ 364

[Close]

BLAST of Spg005806 vs. ExPASy TrEMBL
Match: A0A5A7UEF7 (MAU2 chromatid cohesion factor-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold344G00010 PE=3 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 1.3e-105
Identity = 193/215 (89.77%), Postives = 206/215 (95.81%), Query Frame = 0


Query: 121 ANLVSPLVKMFFATSILHVHLMQWYDDNSVEQAVNKCHEVWESIEPDKRQQCVGLLFYNE 180
           A +  P ++MFFATSILHVHLMQWYDDNSVEQAVNKC EVWES+EP+KRQQCVGLLFYNE
Sbjct: 150 AEICYPELQMFFATSILHVHLMQWYDDNSVEQAVNKCDEVWESMEPEKRQQCVGLLFYNE 209

Query: 181 LLHIFYRLRICDYKNAAQHIDKLDAAMKVDLQRTQYIEVLTKEMNALNQSLSRSDLHHKD 240
           LLHIFYRLRICDYKNAAQH+DKLDAAMK DLQ+TQYIE LTKEMNALNQSLSRSDLH+KD
Sbjct: 210 LLHIFYRLRICDYKNAAQHLDKLDAAMKADLQQTQYIEDLTKEMNALNQSLSRSDLHYKD 269

Query: 241 RLALTEKHAQLQDQLRSMIRPTSVSKESLEPGHFGNMRRTSRDKLELAPYPIDGEWLPKS 300
           RLALT KHAQLQ+QLRS+ RPTS+SKESLEPGHFGN+RRTSRDKLELAPYPIDGEWLPKS
Sbjct: 270 RLALTGKHAQLQEQLRSITRPTSMSKESLEPGHFGNVRRTSRDKLELAPYPIDGEWLPKS 329

Query: 301 AVYALVDLMVVIFSRPKGLFKECAKRILSGMLTIQ 336
           AVYALVDLMVVIFSRPKGLFKEC+KRILSGMLTIQ
Sbjct: 330 AVYALVDLMVVIFSRPKGLFKECSKRILSGMLTIQ 364

[Close]

BLAST of Spg005806 vs. ExPASy TrEMBL
Match: A0A1S3BJ17 (LOW QUALITY PROTEIN: MAU2 chromatid cohesion factor homolog OS=Cucumis melo OX=3656 GN=LOC103490628 PE=3 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 1.3e-105
Identity = 193/215 (89.77%), Postives = 206/215 (95.81%), Query Frame = 0


Query: 121 ANLVSPLVKMFFATSILHVHLMQWYDDNSVEQAVNKCHEVWESIEPDKRQQCVGLLFYNE 180
           A +  P ++MFFATSILHVHLMQWYDDNSVEQAVNKC EVWES+EP+KRQQCVGLLFYNE
Sbjct: 161 AEICYPELQMFFATSILHVHLMQWYDDNSVEQAVNKCDEVWESMEPEKRQQCVGLLFYNE 220

Query: 181 LLHIFYRLRICDYKNAAQHIDKLDAAMKVDLQRTQYIEVLTKEMNALNQSLSRSDLHHKD 240
           LLHIFYRLRICDYKNAAQH+DKLDAAMK DLQ+TQYIE LTKEMNALNQSLSRSDLH+KD
Sbjct: 221 LLHIFYRLRICDYKNAAQHLDKLDAAMKADLQQTQYIEDLTKEMNALNQSLSRSDLHYKD 280

Query: 241 RLALTEKHAQLQDQLRSMIRPTSVSKESLEPGHFGNMRRTSRDKLELAPYPIDGEWLPKS 300
           RLALT KHAQLQ+QLRS+ RPTS+SKESLEPGHFGN+RRTSRDKLELAPYPIDGEWLPKS
Sbjct: 281 RLALTGKHAQLQEQLRSITRPTSMSKESLEPGHFGNVRRTSRDKLELAPYPIDGEWLPKS 340

Query: 301 AVYALVDLMVVIFSRPKGLFKECAKRILSGMLTIQ 336
           AVYALVDLMVVIFSRPKGLFKEC+KRILSGMLTIQ
Sbjct: 341 AVYALVDLMVVIFSRPKGLFKECSKRILSGMLTIQ 375

[Close]

BLAST of Spg005806 vs. ExPASy TrEMBL
Match: A0A0A0L4R7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G000010 PE=3 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 3.2e-104
Identity = 191/215 (88.84%), Postives = 203/215 (94.42%), Query Frame = 0


Query: 121 ANLVSPLVKMFFATSILHVHLMQWYDDNSVEQAVNKCHEVWESIEPDKRQQCVGLLFYNE 180
           A +  P ++MFFATSILHVHLMQWYDDNSV+QAVNKC EVWESIEP+KRQQCVGLLFYNE
Sbjct: 161 AEICYPELQMFFATSILHVHLMQWYDDNSVQQAVNKCDEVWESIEPEKRQQCVGLLFYNE 220

Query: 181 LLHIFYRLRICDYKNAAQHIDKLDAAMKVDLQRTQYIEVLTKEMNALNQSLSRSDLHHKD 240
           LLHIFYRLRICDYKNAAQH+DKLDAAMK DLQ+TQYIE L KEMNALNQSLSRSDLH+KD
Sbjct: 221 LLHIFYRLRICDYKNAAQHLDKLDAAMKADLQQTQYIEDLNKEMNALNQSLSRSDLHYKD 280

Query: 241 RLALTEKHAQLQDQLRSMIRPTSVSKESLEPGHFGNMRRTSRDKLELAPYPIDGEWLPKS 300
           RLALT KHAQLQ+QLRS+ RPTS+SKESLEPGHFGN+RRT RDKLELAPYPIDGEWLPKS
Sbjct: 281 RLALTGKHAQLQEQLRSITRPTSLSKESLEPGHFGNVRRTYRDKLELAPYPIDGEWLPKS 340

Query: 301 AVYALVDLMVVIFSRPKGLFKECAKRILSGMLTIQ 336
           AVYALVDLMVVIFSRPKGLFKEC KRILSGMLTIQ
Sbjct: 341 AVYALVDLMVVIFSRPKGLFKECTKRILSGMLTIQ 375

[Close]

BLAST of Spg005806 vs. ExPASy TrEMBL
Match: A0A6J1DVU1 (sister chromatid cohesion protein SCC4 OS=Momordica charantia OX=3673 GN=LOC111024925 PE=3 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 4.2e-104
Identity = 191/210 (90.95%), Postives = 202/210 (96.19%), Query Frame = 0


Query: 126 PLVKMFFATSILHVHLMQWYDDNSVEQAVNKCHEVWESIEPDKRQQCVGLLFYNELLHIF 185
           P ++MFFATSILHVHLMQWYDDNSVEQAVNKC EVWESIEP+KRQQCVGLLFYNELLHIF
Sbjct: 166 PELQMFFATSILHVHLMQWYDDNSVEQAVNKCDEVWESIEPEKRQQCVGLLFYNELLHIF 225

Query: 186 YRLRICDYKNAAQHIDKLDAAMKVDLQRTQYIEVLTKEMNALNQSLSRSDLHHKDRLALT 245
           YRLR+CDYKNAAQHIDKLDAAMK DLQ+TQYIE LTKEMNALNQSLSR DLH+KDRLALT
Sbjct: 226 YRLRMCDYKNAAQHIDKLDAAMKADLQQTQYIEGLTKEMNALNQSLSRLDLHYKDRLALT 285

Query: 246 EKHAQLQDQLRSMIRPTSVSKESLEPGHFGNMRRTSRDKLELAPYPIDGEWLPKSAVYAL 305
           EKHAQLQDQLRS+ RP+S+S+ESLEP HFG+MRRTS DKLELAPYPIDGEWLPKSAVYAL
Sbjct: 286 EKHAQLQDQLRSINRPSSISRESLEPAHFGSMRRTSGDKLELAPYPIDGEWLPKSAVYAL 345

Query: 306 VDLMVVIFSRPKGLFKECAKRILSGMLTIQ 336
           VDLMVVIFSRPKGLFKECAKRILSGMLTIQ
Sbjct: 346 VDLMVVIFSRPKGLFKECAKRILSGMLTIQ 375

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BLAST of Spg005806 vs. TAIR 10
Match: AT5G51340.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 244.2 bits (622), Expect = 2.5e-64
Identity = 120/220 (54.55%), Postives = 162/220 (73.64%), Query Frame = 0


Query: 118 LVLANLVSPLVKMFFATSILHVHLMQWYDDNSVEQAVNKCHEVWESIEPDKRQQCVGLLF 177
           L  +++  P ++MFF  S+LHVH+MQW DD SVE+AV +C E+W++I  DK  +C GL F
Sbjct: 160 LSASHICFPELQMFFTASMLHVHIMQWTDDYSVEKAVQRCDEIWQTISSDKTDRCPGLFF 219

Query: 178 YNELLHIFYRLRICDYKNAAQHIDKLDAAMKVDLQRTQYIEVLTKEMNALNQSLSRSDLH 237
           YNE+LH+FYRLR+CDYKNA  H+D+LD AM     + Q I+ L  E+++LN SLSR DL 
Sbjct: 220 YNEMLHVFYRLRLCDYKNAQHHVDRLDQAMNAHSHKMQEIQQLLDELSSLNLSLSRYDLP 279

Query: 238 HKDRLALTEKHAQLQDQLRSMIRPTSVSKESLEPGHFGNMRRTSRDKLELAPYPIDGEWL 297
            ++R AL+ + +QLQD++ + + P+S +  SLEP +FGN+ R   +KL L+P PIDGEWL
Sbjct: 280 SRERSALSARQSQLQDRVNA-LSPSSSTVNSLEPAYFGNIDRGWTEKLLLSPSPIDGEWL 339

Query: 298 PKSAVYALVDLMVVIFSRPKGLFKECAKRILSGMLTIQGD 338
           PKSA+ ALV LMVVI  RPKGLFKEC+KRI SG+  IQ +
Sbjct: 340 PKSAIDALVHLMVVISGRPKGLFKECSKRIESGLQIIQDE 378

The following BLAST results are available for this feature:

BLAST of Spg005806 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0052897.1	2.7e-105	89.77	MAU2 chromatid cohesion factor-like protein [Cucumis melo var. makuwa]	[more]
TYK11351.1	2.7e-105	89.77	MAU2 chromatid cohesion factor-like protein [Cucumis melo var. makuwa]	[more]
XP_008448423.1	2.7e-105	89.77	PREDICTED: LOW QUALITY PROTEIN: MAU2 chromatid cohesion factor homolog [Cucumis ...	[more]
XP_031738040.1	6.7e-104	88.84	sister chromatid cohesion protein SCC4 isoform X4 [Cucumis sativus]	[more]
XP_031738038.1	6.7e-104	88.84	sister chromatid cohesion protein SCC4 isoform X1 [Cucumis sativus]	[more]

BLAST of Spg005806 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FGN7	3.5e-63	54.55	Sister chromatid cohesion protein SCC4 OS=Arabidopsis thaliana OX=3702 GN=SCC4 P...	[more]
P0C2F6	2.7e-07	37.89	Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]

BLAST of Spg005806 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CHS2	1.3e-105	89.77	MAU2 chromatid cohesion factor-like protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A5A7UEF7	1.3e-105	89.77	MAU2 chromatid cohesion factor-like protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BJ17	1.3e-105	89.77	LOW QUALITY PROTEIN: MAU2 chromatid cohesion factor homolog OS=Cucumis melo OX=3...	[more]
A0A0A0L4R7	3.2e-104	88.84	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G000010 PE=3 SV=1	[more]
A0A6J1DVU1	4.2e-104	90.95	sister chromatid cohesion protein SCC4 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of Spg005806 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G51340.1	2.5e-64	54.55	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019440	Chromatid cohesion factor MAU2	PANTHER	PTHR21394	UNCHARACTERIZED	coord: 121..335

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg005806.1	Spg005806.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007064	mitotic sister chromatid cohesion