Spg005789 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg005789
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	RING/U-box superfamily protein
Location	scaffold11: 1092510 .. 1095420 (+)
RNA-Seq Expression	Spg005789
Synteny	Spg005789

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAAATTCGGTTGATATTTATAAAACAGAGCGGCTTAAGAACGAAGCTAACAAAAACCGGCGTTTGCTTTTTGCTTTTGCTTAATCAGTTCGAAAAAAATTCGGATTATCGATTACGAGATTTTTGTTTTTTGTTTGCTTTTTTGATCTTTTTTCCGTTTGATTATGAGGACAATCTGTAGGGTTTCGGTTCGAGATTCTGATTCTACTTGATTGATCGTTCGTTTTCGTTCGATTGGAAGTGTTTTTTTCTTTTTTTCTTTTTTCCGGGAAAATTCGACCGCCATGGGAAAGCTTTCGTTCAAGGATTCGCTTAAAGCGCTTGAAGCCGATGTTCAACATGCCAATACTCTGTAACTCTCTTCCTCTTTCTCTCTGCGAATCGAATTTTTCGTTTTATGTGGAATTTCTTTTTGTTTCTGCAAAATTTTGGCTAGAAATCTGTCTGAAAACGCCGATAAATTAAGAAATTGATTCTTACATGTATTTTGCTTGATTTTCCTTGTTAGCTGTGTCTTTCTCCCTCTGGTTTTGTCTGGAAGATACATATTCTAGTGTCGACAGTGCGAGGGACTGTTTACTTCTTGAAACAGTCCACATTGTTGAATGTGGGACAAGCGATATAAATATCTTTCAGTGAACCGTCGAGTCGAATTAAGAATGGTCTTAATTTCTGCACTGTTGTTGAATTTCATTGTTTTTGTGTGTTTTTAGTTTTACCAGTGAATGGAAAGAAATTTAATTGTTGATTGCTCTTTCTGTCTGCTTGTATAAAAGTTGAGCAGTAGGTAACTGAAGAAATATCTGCGGGAGGGATGTCAGATTGATAGCAAATTCATATGAATTAGCCTTAAAATTTTGGTGATTGTTTTTAATTGGTTAAAATTTCTCTTAAACCCGTTTAATCTTATCTCTTTTGTTTGCAGTGCTTTGGACTGTCCAAGAGAGAGTGATGGAGCTTGTGTACAAATGAGAATATCTTACAGTCCTGCTGCTCCCTTTTTCCTTTTTCTTGTTCAATGGACTGACTGTTACCTTGCTGGTGCCTTGGGGCTGCTAAGAATCCTTATCTATGTGGTATGCCTTTTTCCATTTTGGTACTATTTGGCAATTATTACCAGTTACTAGTTGGCAATTGGTATAAGTTTTGTTTGTTTATGTTGTCTTGATATTTTTTTCATTGAAGGCCCTTATCTGTAGGAAATTTAAATTCTATCATGATTGACAAATAACCAAGATTAAAAAAAAGAAGTCCTGATGTTCTTTTTCTTGACAATGAAGGTAATTATCATTTAATTACTTCTTGTCCTGTGCAACTATGTTATGATGCAGACTTATCCAGATGGAAAGACCACCATGTCCATTTATGAGCGAAAAGCTAGCATTAGAGAATTTTATGGTGAGTGAGATTTTAAGAGTGCAGCCATAATGAATATTTACTTTATGACATCCAAATTCCAGTGCAATGAATCTGTTTTTGGAATTTAGCTCTCTGAACTTCTTCTTCTTGTTCTTTTCTGGTGGGGATTTTAAATGATTGTCCTTCCCATCAACAGTGGTAATCTTCCCTTCTCTTCTGCAACTTCAAAGAGGCATCACAGAATTGGAAGATAGAAAACAGAAGGAGGTTTGCAATGCCAGATACAAAAGAAGGGATGAATTTGGAAGGGGAAAACTTTCAGAAATCGACATAGAAAGAGAAAAGGAGTGTGGAATTTGCATGGAGGTTAACGGCATGGTTGTTTTGCCTAATTGCAACCATTCTTTGTGCTTGAAGTGTTATCGAGATTGGTAAGTTTTTGCTTGTGATTAAGCTCCTGTTTGATAGCGACTTTGATTTTTTACTTTTCAATTGATAACAATCTCTGATAAAGAAGATAGAATTCAAAAAAGTAGATTAAGTTTATTCTTCAGACGTGCTCAAAGTTATCCACTTTTAGGACCAGCAATATTTCTTTTCAACGTACAATAAAAAATTATGAAACTAGCATTTCTGTCGGCAAATGCAAGTGGGCCTAGACAAAATGCATCCTCTCTCGTGGGGTAAAATTAAATTCTTTGTTGGATCTGAAAATCTCCATTCTCCATAACCATCCTGATGTCTTTAGTTTGCATTTATTGCTAGCATTCTCAGACTCATATTCAACCTCATCTTCTTTCTATCAATGACTAGAATCTTGTCTGTCTGTTTCATCGTCCAGGCGCGGTCGTTCTCAGTCGTGTCCCTTCTGTCGGGATAGCCTCAAGAGAGTCAACTCCGGCGACCTCTGGATCTACACAGATAAGAGTGAAATGATCGATCTAACTTCGATTTTGCAGGAGAACCGCAGAAGACTATTTGTGTACATTGATAAGTTGCCATTGGTTGTTCCAGATCCAGTGTTTCTTCCTCTTGATTCTCATATTAGGTGAGAATTGTGGGGCACACTCTTCAACCTGTGAGTATTAGTTGAACTTTCTGTATATATAATTATAGCTTGATAAGTTAGGAAATGTAGAAGGTTTCTCTGGCCAATGCCTAGGATGTTGCTGATTTTCAGTTTCTTAGCTTATCAAAATGAATGCTTTTGATTCACACCCAATAGTCTCATTTCATCCACCCATCAATCAGTGCAAATCTTTTTTGAAATATCAGCAAATGAAATTATTGGTAAAGATATCCATTCATAAATACACTTGTGGATAGGGACAAAGATTGGTTTTGTAATCTTATGCTTAGGTGGATGCTACTTGCAAGGATATTTTAGGCTTGTATAGATATTTTGGTACTCTAGCAGCCAAGCCATAGGACAAAAACAAAAGAAAAGAAACACAATTTGAATATGGTCATTTATCCCAATTCTTTATCTGCTTTTCCTTTTTTGCCTTCTCAACTTTTTAGAATCTTAGCCTGTACATGAACTTTTAAATGC

mRNA sequence

ATGGGAAAGCTTTCGTTCAAGGATTCGCTTAAAGCGCTTGAAGCCGATGTTCAACATGCCAATACTCTTGCTTTGGACTGTCCAAGAGAGAGTGATGGAGCTTGTGTACAAATGAGAATATCTTACAGTCCTGCTGCTCCCTTTTTCCTTTTTCTTGTTCAATGGACTGACTGTTACCTTGCTGGTGCCTTGGGGCTGCTAAGAATCCTTATCTATGTGACTTATCCAGATGGAAAGACCACCATGTCCATTTATGAGCGAAAAGCTAGCATTAGAGAATTTTATGTGGTAATCTTCCCTTCTCTTCTGCAACTTCAAAGAGGCATCACAGAATTGGAAGATAGAAAACAGAAGGAGGTTTGCAATGCCAGATACAAAAGAAGGGATGAATTTGGAAGGGGAAAACTTTCAGAAATCGACATAGAAAGAGAAAAGGAGTGTGGAATTTGCATGGAGGTTAACGGCATGGTTGTTTTGCCTAATTGCAACCATTCTTTGTGCTTGAAGTGTTATCGAGATTGGCGCGGTCGTTCTCAGTCGTGTCCCTTCTGTCGGGATAGCCTCAAGAGAGTCAACTCCGGCGACCTCTGGATCTACACAGATAAGAGTGAAATGATCGATCTAACTTCGATTTTGCAGGAGAACCGCAGAAGACTATTTGTGTACATTGATAAGTTGCCATTGGTTGTTCCAGATCCAGTGTTTCTTCCTCTTGATTCTCATATTAGGTGA

Coding sequence (CDS)

ATGGGAAAGCTTTCGTTCAAGGATTCGCTTAAAGCGCTTGAAGCCGATGTTCAACATGCCAATACTCTTGCTTTGGACTGTCCAAGAGAGAGTGATGGAGCTTGTGTACAAATGAGAATATCTTACAGTCCTGCTGCTCCCTTTTTCCTTTTTCTTGTTCAATGGACTGACTGTTACCTTGCTGGTGCCTTGGGGCTGCTAAGAATCCTTATCTATGTGACTTATCCAGATGGAAAGACCACCATGTCCATTTATGAGCGAAAAGCTAGCATTAGAGAATTTTATGTGGTAATCTTCCCTTCTCTTCTGCAACTTCAAAGAGGCATCACAGAATTGGAAGATAGAAAACAGAAGGAGGTTTGCAATGCCAGATACAAAAGAAGGGATGAATTTGGAAGGGGAAAACTTTCAGAAATCGACATAGAAAGAGAAAAGGAGTGTGGAATTTGCATGGAGGTTAACGGCATGGTTGTTTTGCCTAATTGCAACCATTCTTTGTGCTTGAAGTGTTATCGAGATTGGCGCGGTCGTTCTCAGTCGTGTCCCTTCTGTCGGGATAGCCTCAAGAGAGTCAACTCCGGCGACCTCTGGATCTACACAGATAAGAGTGAAATGATCGATCTAACTTCGATTTTGCAGGAGAACCGCAGAAGACTATTTGTGTACATTGATAAGTTGCCATTGGTTGTTCCAGATCCAGTGTTTCTTCCTCTTGATTCTCATATTAGGTGA

Protein sequence

MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQRGITELEDRKQKEVCNARYKRRDEFGRGKLSEIDIEREKECGICMEVNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFCRDSLKRVNSGDLWIYTDKSEMIDLTSILQENRRRLFVYIDKLPLVVPDPVFLPLDSHIR

Homology

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BLAST of Spg005789 vs. NCBI nr
Match: XP_038893737.1 (E3 ubiquitin-protein ligase AIRP2 [Benincasa hispida])

HSP 1 Score: 486.1 bits (1250), Expect = 1.8e-133
Identity = 232/243 (95.47%), Postives = 239/243 (98.35%), Query Frame = 0


Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCYL 60
           MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMR+SYSPAAPFFLFLVQWTDCYL
Sbjct: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYL 60

Query: 61  AGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQRGITELEDRKQKEV 120
           AGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQ+GITELEDRKQKEV
Sbjct: 61  AGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEV 120

Query: 121 CNARYKRRDEFGRGKLSEIDIEREKECGICMEVNGMVVLPNCNHSLCLKCYRDWRGRSQS 180
           CNARY RRDEFGRGKLSEIDIEREKECGICME NGMVVLPNCNHSLCLKCY+DWRGRSQS
Sbjct: 121 CNARYNRRDEFGRGKLSEIDIEREKECGICMEFNGMVVLPNCNHSLCLKCYQDWRGRSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDKSEMIDLTSILQENRRRLFVYIDKLPLVVPDPVFLPLDS 240
           CPFCRDSLKRVNS DLWI+TDKSEMIDLTSILQ+NR+RLF YIDKLPLVVPDPVFLP+DS
Sbjct: 181 CPFCRDSLKRVNSSDLWIFTDKSEMIDLTSILQDNRKRLFAYIDKLPLVVPDPVFLPIDS 240

Query: 241 HIR 244
           HIR
Sbjct: 241 HIR 243

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BLAST of Spg005789 vs. NCBI nr
Match: XP_011658560.1 (E3 ubiquitin-protein ligase AIRP2 isoform X1 [Cucumis sativus])

HSP 1 Score: 486.1 bits (1250), Expect = 1.8e-133
Identity = 232/243 (95.47%), Postives = 238/243 (97.94%), Query Frame = 0


Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCYL 60
           MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMR+SYSPAAPFFLFLVQWTDCYL
Sbjct: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYL 60

Query: 61  AGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQRGITELEDRKQKEV 120
           AGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQ+GITELEDRKQKEV
Sbjct: 61  AGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEV 120

Query: 121 CNARYKRRDEFGRGKLSEIDIEREKECGICMEVNGMVVLPNCNHSLCLKCYRDWRGRSQS 180
           CNARY RRDEFGRGKLSEIDIEREKECGICME NGMVVLPNCNHSLCLKCYRDWRGRSQS
Sbjct: 121 CNARYSRRDEFGRGKLSEIDIEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDKSEMIDLTSILQENRRRLFVYIDKLPLVVPDPVFLPLDS 240
           CPFCRDSLKRVNSGDLWI+TDKSEMIDL SIL +NR+RLF YIDKLPLVVPDPVFLP+DS
Sbjct: 181 CPFCRDSLKRVNSGDLWIFTDKSEMIDLNSILHDNRKRLFAYIDKLPLVVPDPVFLPMDS 240

Query: 241 HIR 244
           HIR
Sbjct: 241 HIR 243

[Close]

BLAST of Spg005789 vs. NCBI nr
Match: KAG6583367.1 (E3 ubiquitin-protein ligase AIRP2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019140.1 RING finger protein-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 482.6 bits (1241), Expect = 1.9e-132
Identity = 231/243 (95.06%), Postives = 239/243 (98.35%), Query Frame = 0


Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCYL 60
           MGKLSFKDSLKALEADVQ+ANTLALDCPRESDGACVQMR+SYSPAAPFFLFLVQWTDCYL
Sbjct: 1   MGKLSFKDSLKALEADVQYANTLALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYL 60

Query: 61  AGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQRGITELEDRKQKEV 120
           AGALGLLRILIYVTYPDGKTTM+IYERKASIREFYVVIFPSLLQLQRGITELEDRKQKEV
Sbjct: 61  AGALGLLRILIYVTYPDGKTTMAIYERKASIREFYVVIFPSLLQLQRGITELEDRKQKEV 120

Query: 121 CNARYKRRDEFGRGKLSEIDIEREKECGICMEVNGMVVLPNCNHSLCLKCYRDWRGRSQS 180
           CNARYKRRDEFGRGKLSEIDIEREKECGICME+N MVVLPNCNHSLCL CYRDWR RSQS
Sbjct: 121 CNARYKRRDEFGRGKLSEIDIEREKECGICMEINTMVVLPNCNHSLCLMCYRDWRNRSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDKSEMIDLTSILQENRRRLFVYIDKLPLVVPDPVFLPLDS 240
           CPFCRDSLKRVNSGDLWI+TDKSEMIDLTSILQ+NR+RLF YI+KLPLVVPDPVFLPLDS
Sbjct: 181 CPFCRDSLKRVNSGDLWIFTDKSEMIDLTSILQDNRKRLFAYIEKLPLVVPDPVFLPLDS 240

Query: 241 HIR 244
           HIR
Sbjct: 241 HIR 243

[Close]

BLAST of Spg005789 vs. NCBI nr
Match: XP_022970478.1 (E3 ubiquitin-protein ligase rnf8-A-like [Cucurbita maxima])

HSP 1 Score: 482.3 bits (1240), Expect = 2.5e-132
Identity = 230/243 (94.65%), Postives = 239/243 (98.35%), Query Frame = 0


Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCYL 60
           MGKLSFKDSLKALEADVQ+ANTLALDCPRESDGACVQMR+SYSPAAPFFLFLVQWTDCYL
Sbjct: 1   MGKLSFKDSLKALEADVQYANTLALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYL 60

Query: 61  AGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQRGITELEDRKQKEV 120
           AGALGLLRILIYVTYPDGKTTM+IYERKASIREFYVVIFPSLLQLQRGITELEDRKQKEV
Sbjct: 61  AGALGLLRILIYVTYPDGKTTMAIYERKASIREFYVVIFPSLLQLQRGITELEDRKQKEV 120

Query: 121 CNARYKRRDEFGRGKLSEIDIEREKECGICMEVNGMVVLPNCNHSLCLKCYRDWRGRSQS 180
           CNARYKRRDEFGRGKLSEIDIEREKECGICME+N MVVLPNCNHSLCL CYRDWR RSQS
Sbjct: 121 CNARYKRRDEFGRGKLSEIDIEREKECGICMEINTMVVLPNCNHSLCLMCYRDWRNRSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDKSEMIDLTSILQENRRRLFVYIDKLPLVVPDPVFLPLDS 240
           CPFCRDSLKRVNSGDLWI+TDKSEM+DLTSILQ+NR+RLF YI+KLPLVVPDPVFLPLDS
Sbjct: 181 CPFCRDSLKRVNSGDLWIFTDKSEMVDLTSILQDNRKRLFTYIEKLPLVVPDPVFLPLDS 240

Query: 241 HIR 244
           HIR
Sbjct: 241 HIR 243

[Close]

BLAST of Spg005789 vs. NCBI nr
Match: XP_023518974.1 (E3 ubiquitin-protein ligase rnf8-A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 481.1 bits (1237), Expect = 5.6e-132
Identity = 230/243 (94.65%), Postives = 238/243 (97.94%), Query Frame = 0


Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCYL 60
           MGKLSFKDSLKALE DVQ+ANTLALDCPRESDGACVQMR+SYSPAAPFFLFLVQWTDCYL
Sbjct: 1   MGKLSFKDSLKALETDVQYANTLALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYL 60

Query: 61  AGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQRGITELEDRKQKEV 120
           AGALGLLRILIYVTYPDGKTTM+IYERKASIREFYVVIFPSLLQLQRGITELEDRKQKEV
Sbjct: 61  AGALGLLRILIYVTYPDGKTTMAIYERKASIREFYVVIFPSLLQLQRGITELEDRKQKEV 120

Query: 121 CNARYKRRDEFGRGKLSEIDIEREKECGICMEVNGMVVLPNCNHSLCLKCYRDWRGRSQS 180
           CNARYKRRDEFGRGKLSEIDIEREKECGICME+N MVVLPNCNHSLCL CYRDWR RSQS
Sbjct: 121 CNARYKRRDEFGRGKLSEIDIEREKECGICMEINTMVVLPNCNHSLCLMCYRDWRNRSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDKSEMIDLTSILQENRRRLFVYIDKLPLVVPDPVFLPLDS 240
           CPFCRDSLKRVNSGDLWI+TDKSEMIDLTSILQ+NR+RLF YI+KLPLVVPDPVFLPLDS
Sbjct: 181 CPFCRDSLKRVNSGDLWIFTDKSEMIDLTSILQDNRKRLFAYIEKLPLVVPDPVFLPLDS 240

Query: 241 HIR 244
           HIR
Sbjct: 241 HIR 243

[Close]

BLAST of Spg005789 vs. ExPASy Swiss-Prot
Match: Q9M022 (E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 4.4e-95
Identity = 162/233 (69.53%), Postives = 194/233 (83.26%), Query Frame = 0


Query: 5   SFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCYLAGAL 64
           SFKDSLKALEAD+Q ANTLA + P E DG  VQMR+SYSPAA  FLFL+QWTDC+ AGAL
Sbjct: 4   SFKDSLKALEADIQFANTLASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCHFAGAL 63

Query: 65  GLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQRGITELEDRKQKEVCNAR 124
           GLLRILIY  Y DGKTTMS++ERK SIREFY V+FPSLLQL  GIT++E+RKQKE+C+ R
Sbjct: 64  GLLRILIYKAYVDGKTTMSLHERKTSIREFYDVLFPSLLQLHGGITDVEERKQKEICDKR 123

Query: 125 YKRRDEFGRGKLSEIDIEREKECGICMEVNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFC 184
           Y+++D   +GK+SEID+ERE+ECGIC+E+   VVLP CNHS+C+ CYR+WR RSQSCPFC
Sbjct: 124 YRKKDRTDKGKMSEIDLEREEECGICLEIRNKVVLPTCNHSMCINCYRNWRARSQSCPFC 183

Query: 185 RDSLKRVNSGDLWIYTDKSEMIDLTSILQENRRRLFVYIDKLPLVVPDPVFLP 238
           R SLKRVNSGDLWIYT  +E+ DL +I +EN +RL +YIDKLPLV  DP  +P
Sbjct: 184 RGSLKRVNSGDLWIYTCSAEIADLPAIYKENLKRLLIYIDKLPLVTSDPNLVP 236

[Close]

BLAST of Spg005789 vs. ExPASy Swiss-Prot
Match: Q13064 (Probable E3 ubiquitin-protein ligase makorin-3 OS=Homo sapiens OX=9606 GN=MKRN3 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 5.9e-07
Identity = 27/77 (35.06%), Postives = 38/77 (49.35%), Query Frame = 0


Query: 144 EKECGICMEV---------NGMVVLPNCNHSLCLKCYRDWRGRSQ-------SCPFCRDS 203
           +K CGICMEV             +L NCNHS C++C R WR   Q       SCP CR +
Sbjct: 308 DKVCGICMEVVYEKANPNDRRFGILSNCNHSFCIRCIRRWRSARQFENRIVKSCPQCRVT 367

Query: 204 LKRVNSGDLWIYTDKSE 205
            + V   + W+  ++ +
Sbjct: 368 SELVIPSEFWVEEEEEK 384

[Close]

BLAST of Spg005789 vs. ExPASy Swiss-Prot
Match: Q13434 (Putative E3 ubiquitin-protein ligase makorin-4 OS=Homo sapiens OX=9606 GN=MKRN4P PE=5 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.0e-06
Identity = 27/72 (37.50%), Postives = 36/72 (50.00%), Query Frame = 0


Query: 143 REKECGICMEV---------NGMVVLPNCNHSLCLKCYRDWRGRSQ-------SCPFCRD 199
           ++K CGICMEV         +   +L NCNH+ CLKC R WR   +       SCP CR 
Sbjct: 312 KDKVCGICMEVVYEKANPNEHRFGILSNCNHTFCLKCIRKWRSAKEFESRIVKSCPQCRI 371

[Close]

BLAST of Spg005789 vs. ExPASy Swiss-Prot
Match: Q4SRI6 (Probable E3 ubiquitin-protein ligase makorin-1 OS=Tetraodon nigroviridis OX=99883 GN=mkrn1 PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.3e-06
Identity = 32/86 (37.21%), Postives = 41/86 (47.67%), Query Frame = 0


Query: 141 IEREKE--CGICMEV---------NGMVVLPNCNHSLCLKCYRDWRGRSQ-------SCP 200
           I+R K+  CG+CMEV             +L NCNH  CLKC R WR   Q       SCP
Sbjct: 218 IQRSKDMMCGVCMEVVFEKANPSERRFGILSNCNHCYCLKCIRKWRSAKQFESKIIKSCP 277

Query: 201 FCRDSLKRVNSGDLWI--YTDKSEMI 207
            CR +   V   + W+    DK ++I
Sbjct: 278 ECRITSNFVIPSEYWVEDKEDKQKLI 303

[Close]

BLAST of Spg005789 vs. ExPASy Swiss-Prot
Match: Q9UHC7 (E3 ubiquitin-protein ligase makorin-1 OS=Homo sapiens OX=9606 GN=MKRN1 PE=1 SV=3)

HSP 1 Score: 54.7 bits (130), Expect = 1.7e-06
Identity = 29/76 (38.16%), Postives = 37/76 (48.68%), Query Frame = 0


Query: 141 IEREKE--CGICMEV---------NGMVVLPNCNHSLCLKCYRDWRGRSQ-------SCP 199
           ++R K+  CGICMEV             +L NCNH+ CLKC R WR   Q       SCP
Sbjct: 273 VQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCP 332

[Close]

BLAST of Spg005789 vs. ExPASy TrEMBL
Match: A0A0A0LY84 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G530140 PE=4 SV=1)

HSP 1 Score: 486.1 bits (1250), Expect = 8.5e-134
Identity = 232/243 (95.47%), Postives = 238/243 (97.94%), Query Frame = 0


Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCYL 60
           MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMR+SYSPAAPFFLFLVQWTDCYL
Sbjct: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYL 60

Query: 61  AGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQRGITELEDRKQKEV 120
           AGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQ+GITELEDRKQKEV
Sbjct: 61  AGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEV 120

Query: 121 CNARYKRRDEFGRGKLSEIDIEREKECGICMEVNGMVVLPNCNHSLCLKCYRDWRGRSQS 180
           CNARY RRDEFGRGKLSEIDIEREKECGICME NGMVVLPNCNHSLCLKCYRDWRGRSQS
Sbjct: 121 CNARYSRRDEFGRGKLSEIDIEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDKSEMIDLTSILQENRRRLFVYIDKLPLVVPDPVFLPLDS 240
           CPFCRDSLKRVNSGDLWI+TDKSEMIDL SIL +NR+RLF YIDKLPLVVPDPVFLP+DS
Sbjct: 181 CPFCRDSLKRVNSGDLWIFTDKSEMIDLNSILHDNRKRLFAYIDKLPLVVPDPVFLPMDS 240

Query: 241 HIR 244
           HIR
Sbjct: 241 HIR 243

[Close]

BLAST of Spg005789 vs. ExPASy TrEMBL
Match: A0A6J1I3Y6 (E3 ubiquitin-protein ligase rnf8-A-like OS=Cucurbita maxima OX=3661 GN=LOC111469447 PE=4 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 1.2e-132
Identity = 230/243 (94.65%), Postives = 239/243 (98.35%), Query Frame = 0


Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCYL 60
           MGKLSFKDSLKALEADVQ+ANTLALDCPRESDGACVQMR+SYSPAAPFFLFLVQWTDCYL
Sbjct: 1   MGKLSFKDSLKALEADVQYANTLALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYL 60

Query: 61  AGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQRGITELEDRKQKEV 120
           AGALGLLRILIYVTYPDGKTTM+IYERKASIREFYVVIFPSLLQLQRGITELEDRKQKEV
Sbjct: 61  AGALGLLRILIYVTYPDGKTTMAIYERKASIREFYVVIFPSLLQLQRGITELEDRKQKEV 120

Query: 121 CNARYKRRDEFGRGKLSEIDIEREKECGICMEVNGMVVLPNCNHSLCLKCYRDWRGRSQS 180
           CNARYKRRDEFGRGKLSEIDIEREKECGICME+N MVVLPNCNHSLCL CYRDWR RSQS
Sbjct: 121 CNARYKRRDEFGRGKLSEIDIEREKECGICMEINTMVVLPNCNHSLCLMCYRDWRNRSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDKSEMIDLTSILQENRRRLFVYIDKLPLVVPDPVFLPLDS 240
           CPFCRDSLKRVNSGDLWI+TDKSEM+DLTSILQ+NR+RLF YI+KLPLVVPDPVFLPLDS
Sbjct: 181 CPFCRDSLKRVNSGDLWIFTDKSEMVDLTSILQDNRKRLFTYIEKLPLVVPDPVFLPLDS 240

Query: 241 HIR 244
           HIR
Sbjct: 241 HIR 243

[Close]

BLAST of Spg005789 vs. ExPASy TrEMBL
Match: A0A6J1HMH6 (E3 ubiquitin-protein ligase rnf8-B-like OS=Cucurbita moschata OX=3662 GN=LOC111464952 PE=4 SV=1)

HSP 1 Score: 480.3 bits (1235), Expect = 4.7e-132
Identity = 230/243 (94.65%), Postives = 238/243 (97.94%), Query Frame = 0


Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCYL 60
           MGKLSFKDSLKALEADVQ+ANTLALDCPRESDGACVQMR+SYSPAAPFFLFLVQWTDCYL
Sbjct: 1   MGKLSFKDSLKALEADVQYANTLALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYL 60

Query: 61  AGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQRGITELEDRKQKEV 120
           AGALGLLRILIYVTYPDGKTTM+IYERKASIREFYVVIFPSLLQLQRGITELEDRKQKEV
Sbjct: 61  AGALGLLRILIYVTYPDGKTTMAIYERKASIREFYVVIFPSLLQLQRGITELEDRKQKEV 120

Query: 121 CNARYKRRDEFGRGKLSEIDIEREKECGICMEVNGMVVLPNCNHSLCLKCYRDWRGRSQS 180
           CNARYKRRDE GRGKLSEIDIEREKECGICME+N MVVLPNCNHSLCL CYRDWR RSQS
Sbjct: 121 CNARYKRRDEIGRGKLSEIDIEREKECGICMEINTMVVLPNCNHSLCLMCYRDWRNRSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDKSEMIDLTSILQENRRRLFVYIDKLPLVVPDPVFLPLDS 240
           CPFCRDSLKRVNSGDLWI+TDKSEMIDLTSILQ+NR+RLF YI+KLPLVVPDPVFLPLDS
Sbjct: 181 CPFCRDSLKRVNSGDLWIFTDKSEMIDLTSILQDNRKRLFAYIEKLPLVVPDPVFLPLDS 240

Query: 241 HIR 244
           HIR
Sbjct: 241 HIR 243

[Close]

BLAST of Spg005789 vs. ExPASy TrEMBL
Match: A0A5A7SRP4 (E3 ubiquitin-protein ligase RNF8-A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001250 PE=4 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 1.4e-131
Identity = 228/243 (93.83%), Postives = 236/243 (97.12%), Query Frame = 0


Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCYL 60
           MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMR+SYSPAAP FLFLVQWTDCYL
Sbjct: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRLSYSPAAPLFLFLVQWTDCYL 60

Query: 61  AGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQRGITELEDRKQKEV 120
           AGALGLLRIL+YVTYPDGKTTMSIYERKASI+EFYVVIFPSLLQLQ+GITELEDRKQKEV
Sbjct: 61  AGALGLLRILLYVTYPDGKTTMSIYERKASIKEFYVVIFPSLLQLQKGITELEDRKQKEV 120

Query: 121 CNARYKRRDEFGRGKLSEIDIEREKECGICMEVNGMVVLPNCNHSLCLKCYRDWRGRSQS 180
           CNARY RRDEFGRGKLSEIDIEREKECGICME NGMVVLPNCNHSLCLKCYRDWRGRSQS
Sbjct: 121 CNARYSRRDEFGRGKLSEIDIEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDKSEMIDLTSILQENRRRLFVYIDKLPLVVPDPVFLPLDS 240
           CPFCRDSLKRVNSGDLWI+TDKSEMIDL SIL +N +RLF YIDKLPLVVPDPVFLP+DS
Sbjct: 181 CPFCRDSLKRVNSGDLWIFTDKSEMIDLNSILHDNCKRLFAYIDKLPLVVPDPVFLPIDS 240

Query: 241 HIR 244
           HIR
Sbjct: 241 HIR 243

[Close]

BLAST of Spg005789 vs. ExPASy TrEMBL
Match: A0A1S3C5C5 (E3 ubiquitin-protein ligase RNF8-A OS=Cucumis melo OX=3656 GN=LOC103497086 PE=4 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 1.4e-131
Identity = 228/243 (93.83%), Postives = 236/243 (97.12%), Query Frame = 0


Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCYL 60
           MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMR+SYSPAAP FLFLVQWTDCYL
Sbjct: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRLSYSPAAPLFLFLVQWTDCYL 60

Query: 61  AGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQRGITELEDRKQKEV 120
           AGALGLLRIL+YVTYPDGKTTMSIYERKASI+EFYVVIFPSLLQLQ+GITELEDRKQKEV
Sbjct: 61  AGALGLLRILLYVTYPDGKTTMSIYERKASIKEFYVVIFPSLLQLQKGITELEDRKQKEV 120

Query: 121 CNARYKRRDEFGRGKLSEIDIEREKECGICMEVNGMVVLPNCNHSLCLKCYRDWRGRSQS 180
           CNARY RRDEFGRGKLSEIDIEREKECGICME NGMVVLPNCNHSLCLKCYRDWRGRSQS
Sbjct: 121 CNARYSRRDEFGRGKLSEIDIEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDKSEMIDLTSILQENRRRLFVYIDKLPLVVPDPVFLPLDS 240
           CPFCRDSLKRVNSGDLWI+TDKSEMIDL SIL +N +RLF YIDKLPLVVPDPVFLP+DS
Sbjct: 181 CPFCRDSLKRVNSGDLWIFTDKSEMIDLNSILHDNCKRLFAYIDKLPLVVPDPVFLPIDS 240

Query: 241 HIR 244
           HIR
Sbjct: 241 HIR 243

[Close]

BLAST of Spg005789 vs. TAIR 10
Match: AT3G47160.1 (RING/U-box superfamily protein )

HSP 1 Score: 389.4 bits (999), Expect = 2.1e-108
Identity = 181/245 (73.88%), Postives = 215/245 (87.76%), Query Frame = 0


Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCYL 60
           M K+SFKDSLKALEAD+QHANT+ALD PRE DGA VQMR+SY+PAA F LFLVQWTDC+L
Sbjct: 1   MAKVSFKDSLKALEADIQHANTVALDYPREKDGARVQMRLSYTPAAQFLLFLVQWTDCHL 60

Query: 61  AGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQRGITELEDRKQKEV 120
           AG LGLLR+LIY+TY DGKTTMS+YERK SI++FY VIFPSLLQL+RGIT+L+DRKQKEV
Sbjct: 61  AGTLGLLRVLIYMTYADGKTTMSVYERKTSIKDFYAVIFPSLLQLERGITDLDDRKQKEV 120

Query: 121 CNARYKRRDEFGRGKLSEIDIEREKECGICMEVNGMVVLPNCNHSLCLKCYRDWRGRSQS 180
           C  RY+ +DE  + KLSEIDIERE+ECGICME+N MVVLPNC HSLC+KCYRDW GRS+S
Sbjct: 121 CKIRYRNKDETEKVKLSEIDIEREEECGICMEMNNMVVLPNCTHSLCIKCYRDWHGRSES 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDKSEMIDLTSILQENRRRLFVYIDKLPLVVPDPVFL--PL 240
           CPFCRDSLKRVNSGDLW+  +KS+ +++ +I +EN++RLFVYI+KLPLVVPD VF   P 
Sbjct: 181 CPFCRDSLKRVNSGDLWMLMEKSDTVNMYTIERENKKRLFVYIEKLPLVVPDQVFASSPY 240

Query: 241 DSHIR 244
           D H++
Sbjct: 241 DCHVK 245

[Close]

BLAST of Spg005789 vs. TAIR 10
Match: AT3G47160.2 (RING/U-box superfamily protein )

HSP 1 Score: 380.6 bits (976), Expect = 9.7e-106
Identity = 181/257 (70.43%), Postives = 215/257 (83.66%), Query Frame = 0


Query: 1   MGKLSFKDSLKALEADVQHANTL------------ALDCPRESDGACVQMRISYSPAAPF 60
           M K+SFKDSLKALEAD+QHANT+            ALD PRE DGA VQMR+SY+PAA F
Sbjct: 1   MAKVSFKDSLKALEADIQHANTVLSNELGDEVIFRALDYPREKDGARVQMRLSYTPAAQF 60

Query: 61  FLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQRG 120
            LFLVQWTDC+LAG LGLLR+LIY+TY DGKTTMS+YERK SI++FY VIFPSLLQL+RG
Sbjct: 61  LLFLVQWTDCHLAGTLGLLRVLIYMTYADGKTTMSVYERKTSIKDFYAVIFPSLLQLERG 120

Query: 121 ITELEDRKQKEVCNARYKRRDEFGRGKLSEIDIEREKECGICMEVNGMVVLPNCNHSLCL 180
           IT+L+DRKQKEVC  RY+ +DE  + KLSEIDIERE+ECGICME+N MVVLPNC HSLC+
Sbjct: 121 ITDLDDRKQKEVCKIRYRNKDETEKVKLSEIDIEREEECGICMEMNNMVVLPNCTHSLCI 180

Query: 181 KCYRDWRGRSQSCPFCRDSLKRVNSGDLWIYTDKSEMIDLTSILQENRRRLFVYIDKLPL 240
           KCYRDW GRS+SCPFCRDSLKRVNSGDLW+  +KS+ +++ +I +EN++RLFVYI+KLPL
Sbjct: 181 KCYRDWHGRSESCPFCRDSLKRVNSGDLWMLMEKSDTVNMYTIERENKKRLFVYIEKLPL 240

Query: 241 VVPDPVFL--PLDSHIR 244
           VVPD VF   P D H++
Sbjct: 241 VVPDQVFASSPYDCHVK 257

[Close]

BLAST of Spg005789 vs. TAIR 10
Match: AT5G58787.1 (RING/U-box superfamily protein )

HSP 1 Score: 379.8 bits (974), Expect = 1.7e-105
Identity = 179/245 (73.06%), Postives = 213/245 (86.94%), Query Frame = 0


Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCYL 60
           M KLSFKDSLKALEAD+QHANTLALD PRE DGA VQMR+SYSP A FFLFLVQWTDC L
Sbjct: 1   MAKLSFKDSLKALEADIQHANTLALDYPREKDGARVQMRLSYSPTAQFFLFLVQWTDCKL 60

Query: 61  AGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQRGITELEDRKQKEV 120
           AG LGLLR+LIY+TY DGKTTMS+YERKASIREF  VI PSL QLQRG+T+++D KQKEV
Sbjct: 61  AGFLGLLRVLIYMTYADGKTTMSVYERKASIREFQAVILPSLSQLQRGVTDIDDSKQKEV 120

Query: 121 CNARYKRRDEFGRGKLSEIDIEREKECGICMEVNGMVVLPNCNHSLCLKCYRDWRGRSQS 180
           C  RY+++DE    ++SEI+IERE+ECGICME+N  VVLPNC HSLC+KCYRDWRGRSQS
Sbjct: 121 CKMRYRKKDE---SEMSEIEIEREEECGICMEMNSKVVLPNCTHSLCIKCYRDWRGRSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDKSEMIDLTSILQENRRRLFVYIDKLPLVVPDPVFL--PL 240
           CPFCRDSLKRV+SGDLW++ D+++ ++LT+I +EN++RLF+YI+KLPLVVPD V+   P 
Sbjct: 181 CPFCRDSLKRVDSGDLWMFLDQNDTVNLTAIARENQKRLFMYIEKLPLVVPDQVYASSPY 240

Query: 241 DSHIR 244
           D H+R
Sbjct: 241 DFHVR 242

[Close]

BLAST of Spg005789 vs. TAIR 10
Match: AT5G58787.2 (RING/U-box superfamily protein )

HSP 1 Score: 349.4 bits (895), Expect = 2.4e-96
Identity = 168/245 (68.57%), Postives = 201/245 (82.04%), Query Frame = 0


Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCYL 60
           M KLSFKDSLKALEAD+QHANTLALD PRE DGA VQMR+SYSP A FFLFLVQWTDC L
Sbjct: 1   MAKLSFKDSLKALEADIQHANTLALDYPREKDGARVQMRLSYSPTAQFFLFLVQWTDCKL 60

Query: 61  AGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQRGITELEDRKQKEV 120
           AG LGLLR+LIY+TY DGKTTMS+YERKASIREF                +++D KQKEV
Sbjct: 61  AGFLGLLRVLIYMTYADGKTTMSVYERKASIREF---------------QDIDDSKQKEV 120

Query: 121 CNARYKRRDEFGRGKLSEIDIEREKECGICMEVNGMVVLPNCNHSLCLKCYRDWRGRSQS 180
           C  RY+++DE    ++SEI+IERE+ECGICME+N  VVLPNC HSLC+KCYRDWRGRSQS
Sbjct: 121 CKMRYRKKDE---SEMSEIEIEREEECGICMEMNSKVVLPNCTHSLCIKCYRDWRGRSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDKSEMIDLTSILQENRRRLFVYIDKLPLVVPDPVFL--PL 240
           CPFCRDSLKRV+SGDLW++ D+++ ++LT+I +EN++RLF+YI+KLPLVVPD V+   P 
Sbjct: 181 CPFCRDSLKRVDSGDLWMFLDQNDTVNLTAIARENQKRLFMYIEKLPLVVPDQVYASSPY 227

Query: 241 DSHIR 244
           D H+R
Sbjct: 241 DFHVR 227

[Close]

BLAST of Spg005789 vs. TAIR 10
Match: AT5G01520.1 (RING/U-box superfamily protein )

HSP 1 Score: 349.0 bits (894), Expect = 3.1e-96
Identity = 162/233 (69.53%), Postives = 194/233 (83.26%), Query Frame = 0


Query: 5   SFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCYLAGAL 64
           SFKDSLKALEAD+Q ANTLA + P E DG  VQMR+SYSPAA  FLFL+QWTDC+ AGAL
Sbjct: 4   SFKDSLKALEADIQFANTLASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCHFAGAL 63

Query: 65  GLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQRGITELEDRKQKEVCNAR 124
           GLLRILIY  Y DGKTTMS++ERK SIREFY V+FPSLLQL  GIT++E+RKQKE+C+ R
Sbjct: 64  GLLRILIYKAYVDGKTTMSLHERKTSIREFYDVLFPSLLQLHGGITDVEERKQKEICDKR 123

Query: 125 YKRRDEFGRGKLSEIDIEREKECGICMEVNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFC 184
           Y+++D   +GK+SEID+ERE+ECGIC+E+   VVLP CNHS+C+ CYR+WR RSQSCPFC
Sbjct: 124 YRKKDRTDKGKMSEIDLEREEECGICLEIRNKVVLPTCNHSMCINCYRNWRARSQSCPFC 183

Query: 185 RDSLKRVNSGDLWIYTDKSEMIDLTSILQENRRRLFVYIDKLPLVVPDPVFLP 238
           R SLKRVNSGDLWIYT  +E+ DL +I +EN +RL +YIDKLPLV  DP  +P
Sbjct: 184 RGSLKRVNSGDLWIYTCSAEIADLPAIYKENLKRLLIYIDKLPLVTSDPNLVP 236

The following BLAST results are available for this feature:

BLAST of Spg005789 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893737.1	1.8e-133	95.47	E3 ubiquitin-protein ligase AIRP2 [Benincasa hispida]	[more]
XP_011658560.1	1.8e-133	95.47	E3 ubiquitin-protein ligase AIRP2 isoform X1 [Cucumis sativus]	[more]
KAG6583367.1	1.9e-132	95.06	E3 ubiquitin-protein ligase AIRP2, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022970478.1	2.5e-132	94.65	E3 ubiquitin-protein ligase rnf8-A-like [Cucurbita maxima]	[more]
XP_023518974.1	5.6e-132	94.65	E3 ubiquitin-protein ligase rnf8-A-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Spg005789 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M022	4.4e-95	69.53	E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 ...	[more]
Q13064	5.9e-07	35.06	Probable E3 ubiquitin-protein ligase makorin-3 OS=Homo sapiens OX=9606 GN=MKRN3 ...	[more]
Q13434	1.0e-06	37.50	Putative E3 ubiquitin-protein ligase makorin-4 OS=Homo sapiens OX=9606 GN=MKRN4P...	[more]
Q4SRI6	1.3e-06	37.21	Probable E3 ubiquitin-protein ligase makorin-1 OS=Tetraodon nigroviridis OX=9988...	[more]
Q9UHC7	1.7e-06	38.16	E3 ubiquitin-protein ligase makorin-1 OS=Homo sapiens OX=9606 GN=MKRN1 PE=1 SV=3	[more]

BLAST of Spg005789 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LY84	8.5e-134	95.47	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G530140 P...	[more]
A0A6J1I3Y6	1.2e-132	94.65	E3 ubiquitin-protein ligase rnf8-A-like OS=Cucurbita maxima OX=3661 GN=LOC111469...	[more]
A0A6J1HMH6	4.7e-132	94.65	E3 ubiquitin-protein ligase rnf8-B-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A5A7SRP4	1.4e-131	93.83	E3 ubiquitin-protein ligase RNF8-A OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3C5C5	1.4e-131	93.83	E3 ubiquitin-protein ligase RNF8-A OS=Cucumis melo OX=3656 GN=LOC103497086 PE=4 ...	[more]

BLAST of Spg005789 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47160.1	2.1e-108	73.88	RING/U-box superfamily protein	[more]
AT3G47160.2	9.7e-106	70.43	RING/U-box superfamily protein	[more]
AT5G58787.1	1.7e-105	73.06	RING/U-box superfamily protein	[more]
AT5G58787.2	2.4e-96	68.57	RING/U-box superfamily protein	[more]
AT5G01520.1	3.1e-96	69.53	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 147..184 e-value: 1.6E-7 score: 41.0
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 147..185 score: 11.766381
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 135..194 e-value: 1.4E-13 score: 51.8
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 144..190 e-value: 1.5E-8 score: 34.4
None	No IPR available	PANTHER	PTHR15315	RING FINGER PROTEIN 41, 151	coord: 1..243
None	No IPR available	PANTHER	PTHR15315:SF75	RING/U-BOX SUPERFAMILY PROTEIN	coord: 1..243
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 135..190
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 162..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg005789.1	Spg005789.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005829	cytosol
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0061630	ubiquitin protein ligase activity