Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGACACCCACAATGAAGATTAAACCTATTGATCGCTTCCCCAGTCAAGGTACGTGCCTGTCTCACATAAGCAGTGCCAATCGGGCCGTGAAAAGCAAGCTGACCGTGACTCAATTGGAGTTGTTCAAAACTGGCACTATATTCGGCCACCTACTTGATGTTGATCTCGTCTTCAACAGTCAGGTGGTCCATCACATATTGTTGAGGGAGGTGGACGACGATAGACCTAAAGTAATGAGCTTCAATCTGAGGGGCACGGTTGTGTCATTTTCGAAGGATGAATTCATGTTGATGACTGGCTGTGGGGGAGTGTGAGTGGTATTGGTGATGTGCAGAGAGGTGAATCTACTGTGGACCTGCGGGCCAAATACTTTGGATCATGCCCGACTGACATGAGCCTTTCCACCTTCGAGAAGGAGTATGCAGACAATGTGGTATTCGACAATGACGAGGATGCAGTTAAGGTGTCATTGGTGTACTACACGGAGCTGGCGATGTTGGGAAAAGACAAACAGAAGACATCGGTCGACGAATCATTGTTCTGGGAAGTGAAGGATTTGGCACACTTCAACAACATTGACTGGGTGTTGGGTTTCCAGAGTGAGTAA
mRNA sequence
ATGAGGACACCCACAATGAAGATTAAACCTATTGATCGCTTCCCCAGTCAAGGTACGTGCCTGTCTCACATAAGCAGTGCCAATCGGGCCGTGAAAAGCAAGCTGACCGTGACTCAATTGGAGTTGTTCAAAACTGGCACTATATTCGGCCACCTACTTGATGTTGATCTCGTCTTCAACAGTCAGGTGGTCCATCACATATTGTTGAGGGAGGTGGACGACGATAGACCTAAAAGAGGTGAATCTACTGTGGACCTGCGGGCCAAATACTTTGGATCATGCCCGACTGACATGAGCCTTTCCACCTTCGAGAAGGAGTATGCAGACAATGTGGTATTCGACAATGACGAGGATGCAGTTAAGGTGTCATTGGTGTACTACACGGAGCTGGCGATGTTGGGAAAAGACAAACAGAAGACATCGGTCGACGAATCATTGTTCTGGGAAGTGAAGGATTTGGCACACTTCAACAACATTGACTGGGTGTTGGGTTTCCAGAGTGAGTAA
Coding sequence (CDS)
ATGAGGACACCCACAATGAAGATTAAACCTATTGATCGCTTCCCCAGTCAAGGTACGTGCCTGTCTCACATAAGCAGTGCCAATCGGGCCGTGAAAAGCAAGCTGACCGTGACTCAATTGGAGTTGTTCAAAACTGGCACTATATTCGGCCACCTACTTGATGTTGATCTCGTCTTCAACAGTCAGGTGGTCCATCACATATTGTTGAGGGAGGTGGACGACGATAGACCTAAAAGAGGTGAATCTACTGTGGACCTGCGGGCCAAATACTTTGGATCATGCCCGACTGACATGAGCCTTTCCACCTTCGAGAAGGAGTATGCAGACAATGTGGTATTCGACAATGACGAGGATGCAGTTAAGGTGTCATTGGTGTACTACACGGAGCTGGCGATGTTGGGAAAAGACAAACAGAAGACATCGGTCGACGAATCATTGTTCTGGGAAGTGAAGGATTTGGCACACTTCAACAACATTGACTGGGTGTTGGGTTTCCAGAGTGAGTAA
Protein sequence
MRTPTMKIKPIDRFPSQGTCLSHISSANRAVKSKLTVTQLELFKTGTIFGHLLDVDLVFNSQVVHHILLREVDDDRPKRGESTVDLRAKYFGSCPTDMSLSTFEKEYADNVVFDNDEDAVKVSLVYYTELAMLGKDKQKTSVDESLFWEVKDLAHFNNIDWVLGFQSE
Homology
BLAST of Spg005760 vs. NCBI nr
Match:
XP_038880341.1 (uncharacterized protein LOC120071983 [Benincasa hispida])
HSP 1 Score: 149.1 bits (375), Expect = 3.5e-32
Identity = 82/191 (42.93%), Postives = 122/191 (63.87%), Query Frame = 0
Query: 5 TMKIKPIDRFPSQGTCLSHISSANRAVKSKLTVTQLELFKTGTIFGHLLDVDLVFNSQVV 64
++KI+ +DRFP Q TCL+H+++AN+ VK KLT QLE+FK T+FG LD++LVFN+ ++
Sbjct: 4 SLKIREVDRFPGQVTCLAHVANANKIVKQKLTERQLEMFKR-TVFGRFLDIELVFNNPLI 63
Query: 65 HHILLREVDDD-----------------------------RPKR----GESTVDLRAKYF 124
HH+LLREV + P R ES+ +L +YF
Sbjct: 64 HHMLLREVKNSGMNSISFFVRGKVVIFSKDEFLLITCLWRSPTRVRWSEESSHELFTRYF 123
Query: 125 GSCPTD--MSLSTFEKEYADNVVFDNDEDAVKVSLVYYTELAMLGKDKQKTSVDESLFWE 161
GS T L E+EY + +VF+ND+DAVK++LVYYTE+AM+GK+KQK ++D +LF +
Sbjct: 124 GSQLTSDAFHLHLLEEEYKE-LVFENDDDAVKITLVYYTEVAMMGKNKQKNAIDRTLFDD 183
BLAST of Spg005760 vs. NCBI nr
Match:
XP_022157199.1 (uncharacterized protein LOC111023969 [Momordica charantia] >XP_022157208.1 uncharacterized protein LOC111023969 [Momordica charantia] >XP_022157213.1 uncharacterized protein LOC111023969 [Momordica charantia])
HSP 1 Score: 147.5 bits (371), Expect = 1.0e-31
Identity = 80/190 (42.11%), Postives = 115/190 (60.53%), Query Frame = 0
Query: 5 TMKIKPIDRFPSQGTCLSHISSANRAVKSKLTVTQLELFKTGTIFGHLLDVDLVFNSQVV 64
T+K+ DRFP+Q T LSH+S+ N+ + KLT TQL++F+ TIFG +D+D++F S +V
Sbjct: 4 TLKVSEADRFPAQVTSLSHLSTTNKIINQKLTPTQLDMFRKRTIFGRFVDLDMMFCSALV 63
Query: 65 HHILLREVDDDRP---------------------------------KRGESTVDLRAKYF 124
H+ LLREV D RP ++ S LR +YF
Sbjct: 64 HYFLLREVVDTRPDVMRFDILGTIVTFSKAEFLLMTGLWRSSGRVLQKKVSKNRLRREYF 123
Query: 125 GSCPTDMSLSTFEKEYADNVVFDNDEDAVKVSLVYYTELAMLGKDKQKTSVDESLFWEVK 162
D+ L FE+EY +VF ND+DAVKVSL+YYTE+ M+GK+K K++VD+ L+ +V+
Sbjct: 124 KDV-VDLRLEEFEQEY-KKIVFANDDDAVKVSLIYYTEIVMMGKNKGKSNVDKDLYGQVE 183
BLAST of Spg005760 vs. NCBI nr
Match:
KGN49944.1 (hypothetical protein Csa_000148 [Cucumis sativus])
HSP 1 Score: 144.8 bits (364), Expect = 6.6e-31
Identity = 87/194 (44.85%), Postives = 119/194 (61.34%), Query Frame = 0
Query: 3 TPTMKIKPIDRFPSQGTCL-SHISSANRAVKSKLTVTQLELFKTGTIFGHLLDVDLVFNS 62
T +KI P +RFP Q + + SHI +AN+ VK KLT QL+LFK T+FG +D+DLVF+S
Sbjct: 2 TRGLKISPNNRFPGQASSMSSHIGTANKIVKEKLTPKQLDLFKR-TVFGRFVDMDLVFSS 61
Query: 63 QVVHHILLREVDDDRP---------------------------------KRGESTVDLRA 122
+VHHILLREV D+RP R E+T L
Sbjct: 62 PLVHHILLREVKDERPDAMSFNLNGIIATFSKEEFLLVTGLWPSPTKPVPRVEATKSLGT 121
Query: 123 KYFGS-CPTDMSLSTFEKEYADNVVFDNDEDAVKVSLVYYTELAMLGKDKQKTSVDESLF 162
KYFG+ DM+ TFE+ Y N+ F +D DAVKV+LVYYTELAM+GKD+ K+ +++SL
Sbjct: 122 KYFGNELVVDMNPLTFEERY-KNLNFYDDLDAVKVTLVYYTELAMMGKDRTKSIINKSLL 181
BLAST of Spg005760 vs. NCBI nr
Match:
XP_031741885.1 (uncharacterized protein LOC105435430 isoform X2 [Cucumis sativus])
HSP 1 Score: 144.8 bits (364), Expect = 6.6e-31
Identity = 87/194 (44.85%), Postives = 119/194 (61.34%), Query Frame = 0
Query: 3 TPTMKIKPIDRFPSQGTCL-SHISSANRAVKSKLTVTQLELFKTGTIFGHLLDVDLVFNS 62
T +KI P +RFP Q + + SHI +AN+ VK KLT QL+LFK T+FG +D+DLVF+S
Sbjct: 85 TRGLKISPNNRFPGQASSMSSHIGTANKIVKEKLTPKQLDLFKR-TVFGRFVDMDLVFSS 144
Query: 63 QVVHHILLREVDDDRP---------------------------------KRGESTVDLRA 122
+VHHILLREV D+RP R E+T L
Sbjct: 145 PLVHHILLREVKDERPDAMSFNLNGIIATFSKEEFLLVTGLWPSPTKPVPRVEATKSLGT 204
Query: 123 KYFGS-CPTDMSLSTFEKEYADNVVFDNDEDAVKVSLVYYTELAMLGKDKQKTSVDESLF 162
KYFG+ DM+ TFE+ Y N+ F +D DAVKV+LVYYTELAM+GKD+ K+ +++SL
Sbjct: 205 KYFGNELVVDMNPLTFEERY-KNLNFYDDLDAVKVTLVYYTELAMMGKDRTKSIINKSLL 264
BLAST of Spg005760 vs. NCBI nr
Match:
XP_011654656.1 (uncharacterized protein LOC105435430 isoform X1 [Cucumis sativus])
HSP 1 Score: 144.8 bits (364), Expect = 6.6e-31
Identity = 87/194 (44.85%), Postives = 119/194 (61.34%), Query Frame = 0
Query: 3 TPTMKIKPIDRFPSQGTCL-SHISSANRAVKSKLTVTQLELFKTGTIFGHLLDVDLVFNS 62
T +KI P +RFP Q + + SHI +AN+ VK KLT QL+LFK T+FG +D+DLVF+S
Sbjct: 85 TRGLKISPNNRFPGQASSMSSHIGTANKIVKEKLTPKQLDLFKR-TVFGRFVDMDLVFSS 144
Query: 63 QVVHHILLREVDDDRP---------------------------------KRGESTVDLRA 122
+VHHILLREV D+RP R E+T L
Sbjct: 145 PLVHHILLREVKDERPDAMSFNLNGIIATFSKEEFLLVTGLWPSPTKPVPRVEATKSLGT 204
Query: 123 KYFGS-CPTDMSLSTFEKEYADNVVFDNDEDAVKVSLVYYTELAMLGKDKQKTSVDESLF 162
KYFG+ DM+ TFE+ Y N+ F +D DAVKV+LVYYTELAM+GKD+ K+ +++SL
Sbjct: 205 KYFGNELVVDMNPLTFEERY-KNLNFYDDLDAVKVTLVYYTELAMMGKDRTKSIINKSLL 264
BLAST of Spg005760 vs. ExPASy TrEMBL
Match:
A0A6J1DSS5 (uncharacterized protein LOC111023969 OS=Momordica charantia OX=3673 GN=LOC111023969 PE=4 SV=1)
HSP 1 Score: 147.5 bits (371), Expect = 5.0e-32
Identity = 80/190 (42.11%), Postives = 115/190 (60.53%), Query Frame = 0
Query: 5 TMKIKPIDRFPSQGTCLSHISSANRAVKSKLTVTQLELFKTGTIFGHLLDVDLVFNSQVV 64
T+K+ DRFP+Q T LSH+S+ N+ + KLT TQL++F+ TIFG +D+D++F S +V
Sbjct: 4 TLKVSEADRFPAQVTSLSHLSTTNKIINQKLTPTQLDMFRKRTIFGRFVDLDMMFCSALV 63
Query: 65 HHILLREVDDDRP---------------------------------KRGESTVDLRAKYF 124
H+ LLREV D RP ++ S LR +YF
Sbjct: 64 HYFLLREVVDTRPDVMRFDILGTIVTFSKAEFLLMTGLWRSSGRVLQKKVSKNRLRREYF 123
Query: 125 GSCPTDMSLSTFEKEYADNVVFDNDEDAVKVSLVYYTELAMLGKDKQKTSVDESLFWEVK 162
D+ L FE+EY +VF ND+DAVKVSL+YYTE+ M+GK+K K++VD+ L+ +V+
Sbjct: 124 KDV-VDLRLEEFEQEY-KKIVFANDDDAVKVSLIYYTEIVMMGKNKGKSNVDKDLYGQVE 183
BLAST of Spg005760 vs. ExPASy TrEMBL
Match:
A0A0A0KM59 (DUF1985 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G141180 PE=4 SV=1)
HSP 1 Score: 144.8 bits (364), Expect = 3.2e-31
Identity = 87/194 (44.85%), Postives = 119/194 (61.34%), Query Frame = 0
Query: 3 TPTMKIKPIDRFPSQGTCL-SHISSANRAVKSKLTVTQLELFKTGTIFGHLLDVDLVFNS 62
T +KI P +RFP Q + + SHI +AN+ VK KLT QL+LFK T+FG +D+DLVF+S
Sbjct: 2 TRGLKISPNNRFPGQASSMSSHIGTANKIVKEKLTPKQLDLFKR-TVFGRFVDMDLVFSS 61
Query: 63 QVVHHILLREVDDDRP---------------------------------KRGESTVDLRA 122
+VHHILLREV D+RP R E+T L
Sbjct: 62 PLVHHILLREVKDERPDAMSFNLNGIIATFSKEEFLLVTGLWPSPTKPVPRVEATKSLGT 121
Query: 123 KYFGS-CPTDMSLSTFEKEYADNVVFDNDEDAVKVSLVYYTELAMLGKDKQKTSVDESLF 162
KYFG+ DM+ TFE+ Y N+ F +D DAVKV+LVYYTELAM+GKD+ K+ +++SL
Sbjct: 122 KYFGNELVVDMNPLTFEERY-KNLNFYDDLDAVKVTLVYYTELAMMGKDRTKSIINKSLL 181
BLAST of Spg005760 vs. ExPASy TrEMBL
Match:
A0A5A7TGU0 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001140 PE=4 SV=1)
HSP 1 Score: 144.4 bits (363), Expect = 4.2e-31
Identity = 86/194 (44.33%), Postives = 120/194 (61.86%), Query Frame = 0
Query: 3 TPTMKIKPIDRFPSQGTCL-SHISSANRAVKSKLTVTQLELFKTGTIFGHLLDVDLVFNS 62
T +KI P +RFP Q + + SHI +AN+ VK KLT QL+LFK T+FG +D+DLVF+S
Sbjct: 8 TRGLKISPNNRFPGQASSMSSHIGTANKIVKEKLTPKQLDLFKR-TVFGRFVDMDLVFSS 67
Query: 63 QVVHHILLREVDDDRP---------------------------------KRGESTVDLRA 122
+VHHILLREV D+RP +R E++ L
Sbjct: 68 PLVHHILLREVKDERPDAMSFNLNGIIATFSKEEFLLVTGLWPSPTKSVRRVEASKSLGT 127
Query: 123 KYFGS-CPTDMSLSTFEKEYADNVVFDNDEDAVKVSLVYYTELAMLGKDKQKTSVDESLF 162
KYFG+ DM+ TFE+ Y N+ F +D DAVKV+LVYYTELAM+GKD+ K+ +++SL
Sbjct: 128 KYFGNELVVDMNPITFEERY-KNLNFCDDLDAVKVTLVYYTELAMMGKDRTKSIINKSLL 187
BLAST of Spg005760 vs. ExPASy TrEMBL
Match:
A0A1S3ATU8 (uncharacterized protein LOC103482899 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482899 PE=4 SV=1)
HSP 1 Score: 144.4 bits (363), Expect = 4.2e-31
Identity = 86/194 (44.33%), Postives = 120/194 (61.86%), Query Frame = 0
Query: 3 TPTMKIKPIDRFPSQGTCL-SHISSANRAVKSKLTVTQLELFKTGTIFGHLLDVDLVFNS 62
T +KI P +RFP Q + + SHI +AN+ VK KLT QL+LFK T+FG +D+DLVF+S
Sbjct: 85 TRGLKISPNNRFPGQASSMSSHIGTANKIVKEKLTPKQLDLFKR-TVFGRFVDMDLVFSS 144
Query: 63 QVVHHILLREVDDDRP---------------------------------KRGESTVDLRA 122
+VHHILLREV D+RP +R E++ L
Sbjct: 145 PLVHHILLREVKDERPDAMSFNLNGIIATFSKEEFLLVTGLWPSPTKSVRRVEASKSLGT 204
Query: 123 KYFGS-CPTDMSLSTFEKEYADNVVFDNDEDAVKVSLVYYTELAMLGKDKQKTSVDESLF 162
KYFG+ DM+ TFE+ Y N+ F +D DAVKV+LVYYTELAM+GKD+ K+ +++SL
Sbjct: 205 KYFGNELVVDMNPITFEERY-KNLNFYDDLDAVKVTLVYYTELAMMGKDRTKSIINKSLL 264
BLAST of Spg005760 vs. ExPASy TrEMBL
Match:
A0A1S3AUB0 (uncharacterized protein LOC103482899 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482899 PE=4 SV=1)
HSP 1 Score: 144.4 bits (363), Expect = 4.2e-31
Identity = 86/194 (44.33%), Postives = 120/194 (61.86%), Query Frame = 0
Query: 3 TPTMKIKPIDRFPSQGTCL-SHISSANRAVKSKLTVTQLELFKTGTIFGHLLDVDLVFNS 62
T +KI P +RFP Q + + SHI +AN+ VK KLT QL+LFK T+FG +D+DLVF+S
Sbjct: 83 TRGLKISPNNRFPGQASSMSSHIGTANKIVKEKLTPKQLDLFKR-TVFGRFVDMDLVFSS 142
Query: 63 QVVHHILLREVDDDRP---------------------------------KRGESTVDLRA 122
+VHHILLREV D+RP +R E++ L
Sbjct: 143 PLVHHILLREVKDERPDAMSFNLNGIIATFSKEEFLLVTGLWPSPTKSVRRVEASKSLGT 202
Query: 123 KYFGS-CPTDMSLSTFEKEYADNVVFDNDEDAVKVSLVYYTELAMLGKDKQKTSVDESLF 162
KYFG+ DM+ TFE+ Y N+ F +D DAVKV+LVYYTELAM+GKD+ K+ +++SL
Sbjct: 203 KYFGNELVVDMNPITFEERY-KNLNFYDDLDAVKVTLVYYTELAMMGKDRTKSIINKSLL 262
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038880341.1 | 3.5e-32 | 42.93 | uncharacterized protein LOC120071983 [Benincasa hispida] | [more] |
XP_022157199.1 | 1.0e-31 | 42.11 | uncharacterized protein LOC111023969 [Momordica charantia] >XP_022157208.1 uncha... | [more] |
KGN49944.1 | 6.6e-31 | 44.85 | hypothetical protein Csa_000148 [Cucumis sativus] | [more] |
XP_031741885.1 | 6.6e-31 | 44.85 | uncharacterized protein LOC105435430 isoform X2 [Cucumis sativus] | [more] |
XP_011654656.1 | 6.6e-31 | 44.85 | uncharacterized protein LOC105435430 isoform X1 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DSS5 | 5.0e-32 | 42.11 | uncharacterized protein LOC111023969 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A0A0KM59 | 3.2e-31 | 44.85 | DUF1985 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G141180 PE=... | [more] |
A0A5A7TGU0 | 4.2e-31 | 44.33 | Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G... | [more] |
A0A1S3ATU8 | 4.2e-31 | 44.33 | uncharacterized protein LOC103482899 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
A0A1S3AUB0 | 4.2e-31 | 44.33 | uncharacterized protein LOC103482899 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
Match Name | E-value | Identity | Description | |