Spg005760 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg005760
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUlp1-like peptidase
Locationscaffold11: 3124380 .. 3124990 (+)
RNA-Seq ExpressionSpg005760
SyntenySpg005760
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGACACCCACAATGAAGATTAAACCTATTGATCGCTTCCCCAGTCAAGGTACGTGCCTGTCTCACATAAGCAGTGCCAATCGGGCCGTGAAAAGCAAGCTGACCGTGACTCAATTGGAGTTGTTCAAAACTGGCACTATATTCGGCCACCTACTTGATGTTGATCTCGTCTTCAACAGTCAGGTGGTCCATCACATATTGTTGAGGGAGGTGGACGACGATAGACCTAAAGTAATGAGCTTCAATCTGAGGGGCACGGTTGTGTCATTTTCGAAGGATGAATTCATGTTGATGACTGGCTGTGGGGGAGTGTGAGTGGTATTGGTGATGTGCAGAGAGGTGAATCTACTGTGGACCTGCGGGCCAAATACTTTGGATCATGCCCGACTGACATGAGCCTTTCCACCTTCGAGAAGGAGTATGCAGACAATGTGGTATTCGACAATGACGAGGATGCAGTTAAGGTGTCATTGGTGTACTACACGGAGCTGGCGATGTTGGGAAAAGACAAACAGAAGACATCGGTCGACGAATCATTGTTCTGGGAAGTGAAGGATTTGGCACACTTCAACAACATTGACTGGGTGTTGGGTTTCCAGAGTGAGTAA

mRNA sequence

ATGAGGACACCCACAATGAAGATTAAACCTATTGATCGCTTCCCCAGTCAAGGTACGTGCCTGTCTCACATAAGCAGTGCCAATCGGGCCGTGAAAAGCAAGCTGACCGTGACTCAATTGGAGTTGTTCAAAACTGGCACTATATTCGGCCACCTACTTGATGTTGATCTCGTCTTCAACAGTCAGGTGGTCCATCACATATTGTTGAGGGAGGTGGACGACGATAGACCTAAAAGAGGTGAATCTACTGTGGACCTGCGGGCCAAATACTTTGGATCATGCCCGACTGACATGAGCCTTTCCACCTTCGAGAAGGAGTATGCAGACAATGTGGTATTCGACAATGACGAGGATGCAGTTAAGGTGTCATTGGTGTACTACACGGAGCTGGCGATGTTGGGAAAAGACAAACAGAAGACATCGGTCGACGAATCATTGTTCTGGGAAGTGAAGGATTTGGCACACTTCAACAACATTGACTGGGTGTTGGGTTTCCAGAGTGAGTAA

Coding sequence (CDS)

ATGAGGACACCCACAATGAAGATTAAACCTATTGATCGCTTCCCCAGTCAAGGTACGTGCCTGTCTCACATAAGCAGTGCCAATCGGGCCGTGAAAAGCAAGCTGACCGTGACTCAATTGGAGTTGTTCAAAACTGGCACTATATTCGGCCACCTACTTGATGTTGATCTCGTCTTCAACAGTCAGGTGGTCCATCACATATTGTTGAGGGAGGTGGACGACGATAGACCTAAAAGAGGTGAATCTACTGTGGACCTGCGGGCCAAATACTTTGGATCATGCCCGACTGACATGAGCCTTTCCACCTTCGAGAAGGAGTATGCAGACAATGTGGTATTCGACAATGACGAGGATGCAGTTAAGGTGTCATTGGTGTACTACACGGAGCTGGCGATGTTGGGAAAAGACAAACAGAAGACATCGGTCGACGAATCATTGTTCTGGGAAGTGAAGGATTTGGCACACTTCAACAACATTGACTGGGTGTTGGGTTTCCAGAGTGAGTAA

Protein sequence

MRTPTMKIKPIDRFPSQGTCLSHISSANRAVKSKLTVTQLELFKTGTIFGHLLDVDLVFNSQVVHHILLREVDDDRPKRGESTVDLRAKYFGSCPTDMSLSTFEKEYADNVVFDNDEDAVKVSLVYYTELAMLGKDKQKTSVDESLFWEVKDLAHFNNIDWVLGFQSE
Homology
BLAST of Spg005760 vs. NCBI nr
Match: XP_038880341.1 (uncharacterized protein LOC120071983 [Benincasa hispida])

HSP 1 Score: 149.1 bits (375), Expect = 3.5e-32
Identity = 82/191 (42.93%), Postives = 122/191 (63.87%), Query Frame = 0

Query: 5   TMKIKPIDRFPSQGTCLSHISSANRAVKSKLTVTQLELFKTGTIFGHLLDVDLVFNSQVV 64
           ++KI+ +DRFP Q TCL+H+++AN+ VK KLT  QLE+FK  T+FG  LD++LVFN+ ++
Sbjct: 4   SLKIREVDRFPGQVTCLAHVANANKIVKQKLTERQLEMFKR-TVFGRFLDIELVFNNPLI 63

Query: 65  HHILLREVDDD-----------------------------RPKR----GESTVDLRAKYF 124
           HH+LLREV +                               P R     ES+ +L  +YF
Sbjct: 64  HHMLLREVKNSGMNSISFFVRGKVVIFSKDEFLLITCLWRSPTRVRWSEESSHELFTRYF 123

Query: 125 GSCPTD--MSLSTFEKEYADNVVFDNDEDAVKVSLVYYTELAMLGKDKQKTSVDESLFWE 161
           GS  T     L   E+EY + +VF+ND+DAVK++LVYYTE+AM+GK+KQK ++D +LF +
Sbjct: 124 GSQLTSDAFHLHLLEEEYKE-LVFENDDDAVKITLVYYTEVAMMGKNKQKNAIDRTLFDD 183

BLAST of Spg005760 vs. NCBI nr
Match: XP_022157199.1 (uncharacterized protein LOC111023969 [Momordica charantia] >XP_022157208.1 uncharacterized protein LOC111023969 [Momordica charantia] >XP_022157213.1 uncharacterized protein LOC111023969 [Momordica charantia])

HSP 1 Score: 147.5 bits (371), Expect = 1.0e-31
Identity = 80/190 (42.11%), Postives = 115/190 (60.53%), Query Frame = 0

Query: 5   TMKIKPIDRFPSQGTCLSHISSANRAVKSKLTVTQLELFKTGTIFGHLLDVDLVFNSQVV 64
           T+K+   DRFP+Q T LSH+S+ N+ +  KLT TQL++F+  TIFG  +D+D++F S +V
Sbjct: 4   TLKVSEADRFPAQVTSLSHLSTTNKIINQKLTPTQLDMFRKRTIFGRFVDLDMMFCSALV 63

Query: 65  HHILLREVDDDRP---------------------------------KRGESTVDLRAKYF 124
           H+ LLREV D RP                                 ++  S   LR +YF
Sbjct: 64  HYFLLREVVDTRPDVMRFDILGTIVTFSKAEFLLMTGLWRSSGRVLQKKVSKNRLRREYF 123

Query: 125 GSCPTDMSLSTFEKEYADNVVFDNDEDAVKVSLVYYTELAMLGKDKQKTSVDESLFWEVK 162
                D+ L  FE+EY   +VF ND+DAVKVSL+YYTE+ M+GK+K K++VD+ L+ +V+
Sbjct: 124 KDV-VDLRLEEFEQEY-KKIVFANDDDAVKVSLIYYTEIVMMGKNKGKSNVDKDLYGQVE 183

BLAST of Spg005760 vs. NCBI nr
Match: KGN49944.1 (hypothetical protein Csa_000148 [Cucumis sativus])

HSP 1 Score: 144.8 bits (364), Expect = 6.6e-31
Identity = 87/194 (44.85%), Postives = 119/194 (61.34%), Query Frame = 0

Query: 3   TPTMKIKPIDRFPSQGTCL-SHISSANRAVKSKLTVTQLELFKTGTIFGHLLDVDLVFNS 62
           T  +KI P +RFP Q + + SHI +AN+ VK KLT  QL+LFK  T+FG  +D+DLVF+S
Sbjct: 2   TRGLKISPNNRFPGQASSMSSHIGTANKIVKEKLTPKQLDLFKR-TVFGRFVDMDLVFSS 61

Query: 63  QVVHHILLREVDDDRP---------------------------------KRGESTVDLRA 122
            +VHHILLREV D+RP                                  R E+T  L  
Sbjct: 62  PLVHHILLREVKDERPDAMSFNLNGIIATFSKEEFLLVTGLWPSPTKPVPRVEATKSLGT 121

Query: 123 KYFGS-CPTDMSLSTFEKEYADNVVFDNDEDAVKVSLVYYTELAMLGKDKQKTSVDESLF 162
           KYFG+    DM+  TFE+ Y  N+ F +D DAVKV+LVYYTELAM+GKD+ K+ +++SL 
Sbjct: 122 KYFGNELVVDMNPLTFEERY-KNLNFYDDLDAVKVTLVYYTELAMMGKDRTKSIINKSLL 181

BLAST of Spg005760 vs. NCBI nr
Match: XP_031741885.1 (uncharacterized protein LOC105435430 isoform X2 [Cucumis sativus])

HSP 1 Score: 144.8 bits (364), Expect = 6.6e-31
Identity = 87/194 (44.85%), Postives = 119/194 (61.34%), Query Frame = 0

Query: 3   TPTMKIKPIDRFPSQGTCL-SHISSANRAVKSKLTVTQLELFKTGTIFGHLLDVDLVFNS 62
           T  +KI P +RFP Q + + SHI +AN+ VK KLT  QL+LFK  T+FG  +D+DLVF+S
Sbjct: 85  TRGLKISPNNRFPGQASSMSSHIGTANKIVKEKLTPKQLDLFKR-TVFGRFVDMDLVFSS 144

Query: 63  QVVHHILLREVDDDRP---------------------------------KRGESTVDLRA 122
            +VHHILLREV D+RP                                  R E+T  L  
Sbjct: 145 PLVHHILLREVKDERPDAMSFNLNGIIATFSKEEFLLVTGLWPSPTKPVPRVEATKSLGT 204

Query: 123 KYFGS-CPTDMSLSTFEKEYADNVVFDNDEDAVKVSLVYYTELAMLGKDKQKTSVDESLF 162
           KYFG+    DM+  TFE+ Y  N+ F +D DAVKV+LVYYTELAM+GKD+ K+ +++SL 
Sbjct: 205 KYFGNELVVDMNPLTFEERY-KNLNFYDDLDAVKVTLVYYTELAMMGKDRTKSIINKSLL 264

BLAST of Spg005760 vs. NCBI nr
Match: XP_011654656.1 (uncharacterized protein LOC105435430 isoform X1 [Cucumis sativus])

HSP 1 Score: 144.8 bits (364), Expect = 6.6e-31
Identity = 87/194 (44.85%), Postives = 119/194 (61.34%), Query Frame = 0

Query: 3   TPTMKIKPIDRFPSQGTCL-SHISSANRAVKSKLTVTQLELFKTGTIFGHLLDVDLVFNS 62
           T  +KI P +RFP Q + + SHI +AN+ VK KLT  QL+LFK  T+FG  +D+DLVF+S
Sbjct: 85  TRGLKISPNNRFPGQASSMSSHIGTANKIVKEKLTPKQLDLFKR-TVFGRFVDMDLVFSS 144

Query: 63  QVVHHILLREVDDDRP---------------------------------KRGESTVDLRA 122
            +VHHILLREV D+RP                                  R E+T  L  
Sbjct: 145 PLVHHILLREVKDERPDAMSFNLNGIIATFSKEEFLLVTGLWPSPTKPVPRVEATKSLGT 204

Query: 123 KYFGS-CPTDMSLSTFEKEYADNVVFDNDEDAVKVSLVYYTELAMLGKDKQKTSVDESLF 162
           KYFG+    DM+  TFE+ Y  N+ F +D DAVKV+LVYYTELAM+GKD+ K+ +++SL 
Sbjct: 205 KYFGNELVVDMNPLTFEERY-KNLNFYDDLDAVKVTLVYYTELAMMGKDRTKSIINKSLL 264

BLAST of Spg005760 vs. ExPASy TrEMBL
Match: A0A6J1DSS5 (uncharacterized protein LOC111023969 OS=Momordica charantia OX=3673 GN=LOC111023969 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 5.0e-32
Identity = 80/190 (42.11%), Postives = 115/190 (60.53%), Query Frame = 0

Query: 5   TMKIKPIDRFPSQGTCLSHISSANRAVKSKLTVTQLELFKTGTIFGHLLDVDLVFNSQVV 64
           T+K+   DRFP+Q T LSH+S+ N+ +  KLT TQL++F+  TIFG  +D+D++F S +V
Sbjct: 4   TLKVSEADRFPAQVTSLSHLSTTNKIINQKLTPTQLDMFRKRTIFGRFVDLDMMFCSALV 63

Query: 65  HHILLREVDDDRP---------------------------------KRGESTVDLRAKYF 124
           H+ LLREV D RP                                 ++  S   LR +YF
Sbjct: 64  HYFLLREVVDTRPDVMRFDILGTIVTFSKAEFLLMTGLWRSSGRVLQKKVSKNRLRREYF 123

Query: 125 GSCPTDMSLSTFEKEYADNVVFDNDEDAVKVSLVYYTELAMLGKDKQKTSVDESLFWEVK 162
                D+ L  FE+EY   +VF ND+DAVKVSL+YYTE+ M+GK+K K++VD+ L+ +V+
Sbjct: 124 KDV-VDLRLEEFEQEY-KKIVFANDDDAVKVSLIYYTEIVMMGKNKGKSNVDKDLYGQVE 183

BLAST of Spg005760 vs. ExPASy TrEMBL
Match: A0A0A0KM59 (DUF1985 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G141180 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 3.2e-31
Identity = 87/194 (44.85%), Postives = 119/194 (61.34%), Query Frame = 0

Query: 3   TPTMKIKPIDRFPSQGTCL-SHISSANRAVKSKLTVTQLELFKTGTIFGHLLDVDLVFNS 62
           T  +KI P +RFP Q + + SHI +AN+ VK KLT  QL+LFK  T+FG  +D+DLVF+S
Sbjct: 2   TRGLKISPNNRFPGQASSMSSHIGTANKIVKEKLTPKQLDLFKR-TVFGRFVDMDLVFSS 61

Query: 63  QVVHHILLREVDDDRP---------------------------------KRGESTVDLRA 122
            +VHHILLREV D+RP                                  R E+T  L  
Sbjct: 62  PLVHHILLREVKDERPDAMSFNLNGIIATFSKEEFLLVTGLWPSPTKPVPRVEATKSLGT 121

Query: 123 KYFGS-CPTDMSLSTFEKEYADNVVFDNDEDAVKVSLVYYTELAMLGKDKQKTSVDESLF 162
           KYFG+    DM+  TFE+ Y  N+ F +D DAVKV+LVYYTELAM+GKD+ K+ +++SL 
Sbjct: 122 KYFGNELVVDMNPLTFEERY-KNLNFYDDLDAVKVTLVYYTELAMMGKDRTKSIINKSLL 181

BLAST of Spg005760 vs. ExPASy TrEMBL
Match: A0A5A7TGU0 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001140 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 4.2e-31
Identity = 86/194 (44.33%), Postives = 120/194 (61.86%), Query Frame = 0

Query: 3   TPTMKIKPIDRFPSQGTCL-SHISSANRAVKSKLTVTQLELFKTGTIFGHLLDVDLVFNS 62
           T  +KI P +RFP Q + + SHI +AN+ VK KLT  QL+LFK  T+FG  +D+DLVF+S
Sbjct: 8   TRGLKISPNNRFPGQASSMSSHIGTANKIVKEKLTPKQLDLFKR-TVFGRFVDMDLVFSS 67

Query: 63  QVVHHILLREVDDDRP---------------------------------KRGESTVDLRA 122
            +VHHILLREV D+RP                                 +R E++  L  
Sbjct: 68  PLVHHILLREVKDERPDAMSFNLNGIIATFSKEEFLLVTGLWPSPTKSVRRVEASKSLGT 127

Query: 123 KYFGS-CPTDMSLSTFEKEYADNVVFDNDEDAVKVSLVYYTELAMLGKDKQKTSVDESLF 162
           KYFG+    DM+  TFE+ Y  N+ F +D DAVKV+LVYYTELAM+GKD+ K+ +++SL 
Sbjct: 128 KYFGNELVVDMNPITFEERY-KNLNFCDDLDAVKVTLVYYTELAMMGKDRTKSIINKSLL 187

BLAST of Spg005760 vs. ExPASy TrEMBL
Match: A0A1S3ATU8 (uncharacterized protein LOC103482899 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482899 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 4.2e-31
Identity = 86/194 (44.33%), Postives = 120/194 (61.86%), Query Frame = 0

Query: 3   TPTMKIKPIDRFPSQGTCL-SHISSANRAVKSKLTVTQLELFKTGTIFGHLLDVDLVFNS 62
           T  +KI P +RFP Q + + SHI +AN+ VK KLT  QL+LFK  T+FG  +D+DLVF+S
Sbjct: 85  TRGLKISPNNRFPGQASSMSSHIGTANKIVKEKLTPKQLDLFKR-TVFGRFVDMDLVFSS 144

Query: 63  QVVHHILLREVDDDRP---------------------------------KRGESTVDLRA 122
            +VHHILLREV D+RP                                 +R E++  L  
Sbjct: 145 PLVHHILLREVKDERPDAMSFNLNGIIATFSKEEFLLVTGLWPSPTKSVRRVEASKSLGT 204

Query: 123 KYFGS-CPTDMSLSTFEKEYADNVVFDNDEDAVKVSLVYYTELAMLGKDKQKTSVDESLF 162
           KYFG+    DM+  TFE+ Y  N+ F +D DAVKV+LVYYTELAM+GKD+ K+ +++SL 
Sbjct: 205 KYFGNELVVDMNPITFEERY-KNLNFYDDLDAVKVTLVYYTELAMMGKDRTKSIINKSLL 264

BLAST of Spg005760 vs. ExPASy TrEMBL
Match: A0A1S3AUB0 (uncharacterized protein LOC103482899 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482899 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 4.2e-31
Identity = 86/194 (44.33%), Postives = 120/194 (61.86%), Query Frame = 0

Query: 3   TPTMKIKPIDRFPSQGTCL-SHISSANRAVKSKLTVTQLELFKTGTIFGHLLDVDLVFNS 62
           T  +KI P +RFP Q + + SHI +AN+ VK KLT  QL+LFK  T+FG  +D+DLVF+S
Sbjct: 83  TRGLKISPNNRFPGQASSMSSHIGTANKIVKEKLTPKQLDLFKR-TVFGRFVDMDLVFSS 142

Query: 63  QVVHHILLREVDDDRP---------------------------------KRGESTVDLRA 122
            +VHHILLREV D+RP                                 +R E++  L  
Sbjct: 143 PLVHHILLREVKDERPDAMSFNLNGIIATFSKEEFLLVTGLWPSPTKSVRRVEASKSLGT 202

Query: 123 KYFGS-CPTDMSLSTFEKEYADNVVFDNDEDAVKVSLVYYTELAMLGKDKQKTSVDESLF 162
           KYFG+    DM+  TFE+ Y  N+ F +D DAVKV+LVYYTELAM+GKD+ K+ +++SL 
Sbjct: 203 KYFGNELVVDMNPITFEERY-KNLNFYDDLDAVKVTLVYYTELAMMGKDRTKSIINKSLL 262

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038880341.13.5e-3242.93uncharacterized protein LOC120071983 [Benincasa hispida][more]
XP_022157199.11.0e-3142.11uncharacterized protein LOC111023969 [Momordica charantia] >XP_022157208.1 uncha... [more]
KGN49944.16.6e-3144.85hypothetical protein Csa_000148 [Cucumis sativus][more]
XP_031741885.16.6e-3144.85uncharacterized protein LOC105435430 isoform X2 [Cucumis sativus][more]
XP_011654656.16.6e-3144.85uncharacterized protein LOC105435430 isoform X1 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DSS55.0e-3242.11uncharacterized protein LOC111023969 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A0A0KM593.2e-3144.85DUF1985 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G141180 PE=... [more]
A0A5A7TGU04.2e-3144.33Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G... [more]
A0A1S3ATU84.2e-3144.33uncharacterized protein LOC103482899 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3AUB04.2e-3144.33uncharacterized protein LOC103482899 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg005760.1Spg005760.1mRNA