Spg005742 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg005742
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein LURP-one-related 7
Locationscaffold11: 361107 .. 363386 (+)
RNA-Seq ExpressionSpg005742
SyntenySpg005742
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCTCTCCTCTTCAGTGTTCATTCTTTCATTTTCTTGCAAATCCTAATGTTTATGGCTAATTCTTCAGATCCCGCCATCTGCTCTGCAACTCTCCCGATTCCCGTTGATCTCTTTCTATCCAAAAAACATCCCGACCTCGTAACTAATTCCTCAGGTGATATCATCTACAGACTCAGTCGTCAATCTTTGAAATCGTCGTCAATTGACAAGATTGTACTGCTTGACGCCGCCGCCGATCCTATCATTTCCATTTATCGCGCTAGCGTGAGTATTCTGTCTACTTTTGTCCTTCATCTCCTCTGTTAGTTTCAACTTCCAGTGCCATAGCTTTGTTTAGCATACTGCTGTAGATCAGTTTTTCCTTTTCTCTGTGTGATTGCTTGCATGTTCCTAATCATGTGGAGAGGAAGTTGGAAGCCCCCGATTCTCGGAAGTTGGGTATAATTCGATTATCTTTGTTGTGATCGTGTGAACATAATATGAGAAAAAGACGCAATGGGGAATTAGATCCATTAAATTAATTCCGAGTAATTGGAGAATTCCATCTCGTATCCACAGAAGAGTTAGTGAGGTTTCCCAATTCCTTTCCCTCTTTGTTGGGAGGGAAATGTTTCTGCTCTTCCTGTTCCTAGCTGTTAATGTTACAGAATGCTTTAGAATTTCAGGTTATTCAGTTTGTTCATCGACTCTTTCTTGTAGAGTTTTTATCTGCTATTCAGTTGTTTGTGGTTTTAGGATTGTGAACCATCCTGGGTTGGCCCTAATGGTCAATAAGGGCCATAGAAAAAAATAAGGGCTTAGAGAGAATGAGTTCAATCCATGGTGGCCACCTACCTAGGATTTAATATCCTACGAGTTTCCTTGGCAATCAAATGTAGTAGGGTCAGGCAGTTGTACCATGAGATTAGTCAAGGTGCGCATAAGCTGGTCCGGACACTCACAGATATTAAAAAAAAAAAAAGATTCCTTCTTGCTGTTGTTCTGAAATAATGTAAACAGGTTTGCATTGGTCTCAGAAAGAATCTTGGCAAGGCTTCAAGGGGGATGTTGGAGAGCAGGACTTGCTCTTCAAAATGCAGAGAACACTCAAAAAACTTAGAAGAACTGAGTTCAAAGTCTTCCTTGTCGGTGAAAATTTAGACGACTCGAATGCTAGCTTGGAGATGAAAGGCTGGCCTTTCCAGAGATCCTGTACTATATATAAAGGCAATACTATAGTGGCCCAGGTACAGTATAGCAATAACATATGGAAGAATGTTTTTATAAGGCTGTTCATTTCATCCCTAAGCATGTTATTTGTTGAGTGGAATATGAGCATGACAATTCTAACTTGATGCTTTCCATAGCCTAGGTACTTTAGCAGCTAAAGAGTTCTAACTCCTAGCTCATCATTGATAAGATCATTTTATTTCTGATTCCAAATCCAACTTAGGCCTGTTTGGAATGATTTTCCAAATACTTAAAAATGTGTTTCCAAGTGTAAAAAAAGTGCTTTTAAGGAATTTTAAAGTGGTTTCAAACGGACCTTTAGTTTTACTTATTCACCGAAACTCATTAAATTAGCTTGAACATTCAACAAAGATACCAACCCTCTCATGTGGCTTAAAATAATGTGCAACTTATGAAAGGTGAAAGCCTTGAAATCTGTAAATAAATCATCAATATCCCTCCTCTGAGTCCATGTTAGTGTCTTTGCATTTTCAGTCGTACAAAGTATCATTTGCCACATCTTATGAAAGCTATGGTTCATTGGCAAAAAGGGGAAATAAAATCTGAAACAAACTGAATTTTTGAAAAGACATCACATTGTTTGGTGCATAAACTACAGAGAGCCATGTGCATTGGTGACTAAAGAATTCTGGTGATTATTTCTTTTTTGATGCAGACAAGCCTGATGCACAAGCTTCATCAAATTTGGGTCAGAAGGGGAAGATTTCGACTAACCATTTTTCCTGGTTCTGTAGATCCAGCATTGATTGTGGCTTTGGTTGTAATATTCTTTGATGGACGAATGTAACAGAGCTGAGCGATAATTCAGAAGTTGATAATCTCTGCTGCGTTTGATGGATCTGATCGAACAAAATAATGAGAGTGAAAAATGAATGCAAGAAGAAAAAGTCATTGGAATCATCATCTATACTTCGCATTTGGTAGTGGAATGTGATGAAGAATGTCAGTAAATTAAATTGATAAAGGCGAACCTGAGCTATATTTCACACAAATCTTGTACTAATGACTAAAAGGTCCGTGGTTCAAATCCTCCACTCTCACATGTTGTC

mRNA sequence

ATGTTTATGGCTAATTCTTCAGATCCCGCCATCTGCTCTGCAACTCTCCCGATTCCCGTTGATCTCTTTCTATCCAAAAAACATCCCGACCTCGTAACTAATTCCTCAGGTGATATCATCTACAGACTCAGTCGTCAATCTTTGAAATCGTCGTCAATTGACAAGATTGTACTGCTTGACGCCGCCGCCGATCCTATCATTTCCATTTATCGCGCTAGCATCAGTTTTTCCTTTTCTCTGTGTGATTGCTTGCATGTTCCTAATCATGTGGAGAGGAAGTTGGAAGCCCCCGATTCTCGGAAGTTGGAATGCTTTAGAATTTCAGGTTTGCATTGGTCTCAGAAAGAATCTTGGCAAGGCTTCAAGGGGGATGTTGGAGAGCAGGACTTGCTCTTCAAAATGCAGAGAACACTCAAAAAACTTAGAAGAACTGAGTTCAAAGTCTTCCTTGTCGGTGAAAATTTAGACGACTCGAATGCTAGCTTGGAGATGAAAGGCTGGCCTTTCCAGAGATCCTGTACTATATATAAAGGCAATACTATAGTGGCCCAGACAAGCCTGATGCACAAGCTTCATCAAATTTGGGTCAGAAGGGGAAGATTTCGACTAACCATTTTTCCTGGTTCTGTAGATCCAGCATTGATTGTGGCTTTGGTTGTAATATTCTTTGATGGACGAATGTAA

Coding sequence (CDS)

ATGTTTATGGCTAATTCTTCAGATCCCGCCATCTGCTCTGCAACTCTCCCGATTCCCGTTGATCTCTTTCTATCCAAAAAACATCCCGACCTCGTAACTAATTCCTCAGGTGATATCATCTACAGACTCAGTCGTCAATCTTTGAAATCGTCGTCAATTGACAAGATTGTACTGCTTGACGCCGCCGCCGATCCTATCATTTCCATTTATCGCGCTAGCATCAGTTTTTCCTTTTCTCTGTGTGATTGCTTGCATGTTCCTAATCATGTGGAGAGGAAGTTGGAAGCCCCCGATTCTCGGAAGTTGGAATGCTTTAGAATTTCAGGTTTGCATTGGTCTCAGAAAGAATCTTGGCAAGGCTTCAAGGGGGATGTTGGAGAGCAGGACTTGCTCTTCAAAATGCAGAGAACACTCAAAAAACTTAGAAGAACTGAGTTCAAAGTCTTCCTTGTCGGTGAAAATTTAGACGACTCGAATGCTAGCTTGGAGATGAAAGGCTGGCCTTTCCAGAGATCCTGTACTATATATAAAGGCAATACTATAGTGGCCCAGACAAGCCTGATGCACAAGCTTCATCAAATTTGGGTCAGAAGGGGAAGATTTCGACTAACCATTTTTCCTGGTTCTGTAGATCCAGCATTGATTGTGGCTTTGGTTGTAATATTCTTTGATGGACGAATGTAA

Protein sequence

MFMANSSDPAICSATLPIPVDLFLSKKHPDLVTNSSGDIIYRLSRQSLKSSSIDKIVLLDAAADPIISIYRASISFSFSLCDCLHVPNHVERKLEAPDSRKLECFRISGLHWSQKESWQGFKGDVGEQDLLFKMQRTLKKLRRTEFKVFLVGENLDDSNASLEMKGWPFQRSCTIYKGNTIVAQTSLMHKLHQIWVRRGRFRLTIFPGSVDPALIVALVVIFFDGRM
Homology
BLAST of Spg005742 vs. NCBI nr
Match: XP_038884438.1 (protein LURP-one-related 7 [Benincasa hispida])

HSP 1 Score: 310.8 bits (795), Expect = 9.4e-81
Identity = 164/226 (72.57%), Postives = 176/226 (77.88%), Query Frame = 0

Query: 3   MANSSDPAICSATLPIPVDLFLSKKHPDLVTNSSGDIIYRLSRQSLKSSSIDKIVLLD-A 62
           MANSSDPAICSA LPI VDLFLSK+HPD +TNSSGDIIYR++R SLKSSS+DKIVLLD A
Sbjct: 1   MANSSDPAICSAALPIAVDLFLSKEHPDYLTNSSGDIIYRINRPSLKSSSVDKIVLLDAA 60

Query: 63  AADPIISIYRASISFSFSLCDCLHVPNHVERKLEAPDSRKLECFRISGLHWSQKESWQGF 122
           AADP+ISI+R +                                         KESWQGF
Sbjct: 61  AADPLISIFRVN-----------------------------------------KESWQGF 120

Query: 123 KGDVGEQDLLFKMQRTLKKLRRTEFKVFLVGENLDDSNASLEMKGWPFQRSCTIYKGNTI 182
           KGDVGE+DLLFK+QRTL KL+RTEFKVFLVGE+LDDSNASLEMKGWPFQRSCTIYKGNTI
Sbjct: 121 KGDVGEEDLLFKVQRTLNKLKRTEFKVFLVGESLDDSNASLEMKGWPFQRSCTIYKGNTI 180

Query: 183 VAQTSLMHKLHQIWVRRGRFRLTIFPGSVDPALIVALVVIFFDGRM 228
           VAQTSLMHKLHQIWVRRGRFRLTIFP  VDPALIVALVVIFFDGRM
Sbjct: 181 VAQTSLMHKLHQIWVRRGRFRLTIFPSPVDPALIVALVVIFFDGRM 185

BLAST of Spg005742 vs. NCBI nr
Match: XP_022948358.1 (protein LURP-one-related 7 [Cucurbita moschata])

HSP 1 Score: 299.7 bits (766), Expect = 2.2e-77
Identity = 161/227 (70.93%), Postives = 175/227 (77.09%), Query Frame = 0

Query: 3   MANSSDPAICSATLPIPVDLFLSKKHPDLVTNSSGDIIYRLSRQSLKSSSIDKIVLLD-- 62
           MANSSDPAIC+A+LPIPVDLFLSKKHPD VT SSGD I+RLSRQSLKSSSIDKIVL D  
Sbjct: 1   MANSSDPAICAASLPIPVDLFLSKKHPDHVTTSSGDFIFRLSRQSLKSSSIDKIVLHDAA 60

Query: 63  AAADPIISIYRASISFSFSLCDCLHVPNHVERKLEAPDSRKLECFRISGLHWSQKESWQG 122
           AAA P+ISI+R +                                         KESWQG
Sbjct: 61  AAAGPLISIHRVN-----------------------------------------KESWQG 120

Query: 123 FKGDVGEQDLLFKMQRTLKKLRRTEFKVFLVGENLDDSNASLEMKGWPFQRSCTIYKGNT 182
           FKGD+GEQDLLFK++RTL KLRRTEFKVFLVGEN DDSNASLEMKG+PFQRSCTIYKGNT
Sbjct: 121 FKGDIGEQDLLFKVERTLNKLRRTEFKVFLVGENSDDSNASLEMKGFPFQRSCTIYKGNT 180

Query: 183 IVAQTSLMHKLHQIWVRRGRFRLTIFPGSVDPALIVALVVIFFDGRM 228
           IVAQTSLMHKLHQI VRRGRFRLTIFPG+VDP+LIVAL+VIFFDGR+
Sbjct: 181 IVAQTSLMHKLHQICVRRGRFRLTIFPGTVDPSLIVALIVIFFDGRI 186

BLAST of Spg005742 vs. NCBI nr
Match: XP_023523465.1 (protein LURP-one-related 7 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 297.7 bits (761), Expect = 8.3e-77
Identity = 161/229 (70.31%), Postives = 175/229 (76.42%), Query Frame = 0

Query: 3   MANSSDPAICSATLPIPVDLFLSKKHPDLVTNSSGDIIYRLSRQSLKSSSIDKIVLLD-- 62
           MANSSDPAIC+A LPIPVDLFLSKKHPD VT SSG+II+RLSRQSLKSSSIDKIVL D  
Sbjct: 1   MANSSDPAICAAPLPIPVDLFLSKKHPDHVTTSSGNIIFRLSRQSLKSSSIDKIVLHDAA 60

Query: 63  --AAADPIISIYRASISFSFSLCDCLHVPNHVERKLEAPDSRKLECFRISGLHWSQKESW 122
             AAA P+ISI+R +                                         KESW
Sbjct: 61  AAAAAGPLISIHRVN-----------------------------------------KESW 120

Query: 123 QGFKGDVGEQDLLFKMQRTLKKLRRTEFKVFLVGENLDDSNASLEMKGWPFQRSCTIYKG 182
           QGFKGD+GEQDLLFK++RTL KLRRTEFKVFLVGEN DDSNASLEMKG+PFQRSCTIYKG
Sbjct: 121 QGFKGDIGEQDLLFKVERTLNKLRRTEFKVFLVGENSDDSNASLEMKGFPFQRSCTIYKG 180

Query: 183 NTIVAQTSLMHKLHQIWVRRGRFRLTIFPGSVDPALIVALVVIFFDGRM 228
           NTIVAQTSLMHKLHQI VRRGRFRLTIFPG+VDP+LIVAL+VIFFDGR+
Sbjct: 181 NTIVAQTSLMHKLHQICVRRGRFRLTIFPGTVDPSLIVALIVIFFDGRI 188

BLAST of Spg005742 vs. NCBI nr
Match: XP_023523464.1 (protein LURP-one-related 7 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 297.4 bits (760), Expect = 1.1e-76
Identity = 161/230 (70.00%), Postives = 175/230 (76.09%), Query Frame = 0

Query: 3   MANSSDPAICSATLPIPVDLFLSKKHPDLVTNSSGDIIYRLSRQSLKSSSIDKIVLLD-- 62
           MANSSDPAIC+A LPIPVDLFLSKKHPD VT SSG+II+RLSRQSLKSSSIDKIVL D  
Sbjct: 1   MANSSDPAICAAPLPIPVDLFLSKKHPDHVTTSSGNIIFRLSRQSLKSSSIDKIVLHDAA 60

Query: 63  ---AAADPIISIYRASISFSFSLCDCLHVPNHVERKLEAPDSRKLECFRISGLHWSQKES 122
              AAA P+ISI+R +                                         KES
Sbjct: 61  AAAAAAGPLISIHRVN-----------------------------------------KES 120

Query: 123 WQGFKGDVGEQDLLFKMQRTLKKLRRTEFKVFLVGENLDDSNASLEMKGWPFQRSCTIYK 182
           WQGFKGD+GEQDLLFK++RTL KLRRTEFKVFLVGEN DDSNASLEMKG+PFQRSCTIYK
Sbjct: 121 WQGFKGDIGEQDLLFKVERTLNKLRRTEFKVFLVGENSDDSNASLEMKGFPFQRSCTIYK 180

Query: 183 GNTIVAQTSLMHKLHQIWVRRGRFRLTIFPGSVDPALIVALVVIFFDGRM 228
           GNTIVAQTSLMHKLHQI VRRGRFRLTIFPG+VDP+LIVAL+VIFFDGR+
Sbjct: 181 GNTIVAQTSLMHKLHQICVRRGRFRLTIFPGTVDPSLIVALIVIFFDGRI 189

BLAST of Spg005742 vs. NCBI nr
Match: XP_004139831.1 (protein LURP-one-related 7 [Cucumis sativus] >KGN44278.1 hypothetical protein Csa_016427 [Cucumis sativus])

HSP 1 Score: 294.3 bits (752), Expect = 9.1e-76
Identity = 153/226 (67.70%), Postives = 170/226 (75.22%), Query Frame = 0

Query: 3   MANSSDPAICSATLPIPVDLFLSKKHPDLVTNSSGDIIYRLSRQSLKSSSIDKIVLLDA- 62
           MAN SDPAICS  LPIP+DLFLSK+HPD +TNSSGDIIYR++R +LKSSS+DKI+L  A 
Sbjct: 1   MANPSDPAICSPALPIPIDLFLSKQHPDYLTNSSGDIIYRINRHALKSSSVDKILLPHAD 60

Query: 63  AADPIISIYRASISFSFSLCDCLHVPNHVERKLEAPDSRKLECFRISGLHWSQKESWQGF 122
           AADP+ISI+R +                                         KESW+GF
Sbjct: 61  AADPLISIFRVN-----------------------------------------KESWEGF 120

Query: 123 KGDVGEQDLLFKMQRTLKKLRRTEFKVFLVGENLDDSNASLEMKGWPFQRSCTIYKGNTI 182
           KGDVGE++LLFK+QRTL KLRRTEFKVFLVG NLDDSNAS EMKGWPFQRSCT+Y GNTI
Sbjct: 121 KGDVGEENLLFKVQRTLNKLRRTEFKVFLVGGNLDDSNASFEMKGWPFQRSCTVYNGNTI 180

Query: 183 VAQTSLMHKLHQIWVRRGRFRLTIFPGSVDPALIVALVVIFFDGRM 228
           VAQTSLMHKL QIWVRRGRFRLTIFP SVDPALIVAL+VIFFDGRM
Sbjct: 181 VAQTSLMHKLRQIWVRRGRFRLTIFPSSVDPALIVALIVIFFDGRM 185

BLAST of Spg005742 vs. ExPASy Swiss-Prot
Match: Q8GWL2 (Protein LURP-one-related 7 OS=Arabidopsis thaliana OX=3702 GN=At2g30270 PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 5.6e-28
Identity = 89/209 (42.58%), Postives = 115/209 (55.02%), Query Frame = 0

Query: 18  IPVDLFLSKKHPDLVTNSSGDIIYRLSRQSLKSSSIDKIVLLDAAADPIISIYRASISFS 77
           IPVDLF SKK P L   SSGD+ +  S + L                  + I R S S  
Sbjct: 18  IPVDLFASKKLPGL---SSGDLGFADSSEHL------------------VFILRKSSSSL 77

Query: 78  FSLCDCLHVPNHVERKLEAPDSRKLECFRISGLHWSQKESWQGFKGDVGE-QDLLFKMQR 137
            SL D   VP                 F IS LH      W+  KGDV + +DL+  ++R
Sbjct: 78  KSLLDSSGVP----------------LFSISRLH---NGVWELHKGDVEKRKDLVLTVKR 137

Query: 138 TLKKLRRTEFKVFLVGENLDDSNASLEMKGWPFQRSCTIYKGNTIVAQTSLMHKLHQIWV 197
           T K+  +TE +V   GE    S+ +L +KG PFQ+SCTIY  ++IVAQTSLM+KL QI+V
Sbjct: 138 TSKRFSKTESEVSFAGE----SSENLVIKGVPFQKSCTIYSQDSIVAQTSLMYKLRQIYV 182

Query: 198 RRGRFRLTIFPGSVDPALIVALVVIFFDG 226
            R +FRLTIFPGS+D +L+VA+V IF  G
Sbjct: 198 GRSKFRLTIFPGSIDHSLVVAMVAIFLQG 182

BLAST of Spg005742 vs. ExPASy TrEMBL
Match: A0A6J1G943 (protein LURP-one-related 7 OS=Cucurbita moschata OX=3662 GN=LOC111452060 PE=3 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 1.1e-77
Identity = 161/227 (70.93%), Postives = 175/227 (77.09%), Query Frame = 0

Query: 3   MANSSDPAICSATLPIPVDLFLSKKHPDLVTNSSGDIIYRLSRQSLKSSSIDKIVLLD-- 62
           MANSSDPAIC+A+LPIPVDLFLSKKHPD VT SSGD I+RLSRQSLKSSSIDKIVL D  
Sbjct: 1   MANSSDPAICAASLPIPVDLFLSKKHPDHVTTSSGDFIFRLSRQSLKSSSIDKIVLHDAA 60

Query: 63  AAADPIISIYRASISFSFSLCDCLHVPNHVERKLEAPDSRKLECFRISGLHWSQKESWQG 122
           AAA P+ISI+R +                                         KESWQG
Sbjct: 61  AAAGPLISIHRVN-----------------------------------------KESWQG 120

Query: 123 FKGDVGEQDLLFKMQRTLKKLRRTEFKVFLVGENLDDSNASLEMKGWPFQRSCTIYKGNT 182
           FKGD+GEQDLLFK++RTL KLRRTEFKVFLVGEN DDSNASLEMKG+PFQRSCTIYKGNT
Sbjct: 121 FKGDIGEQDLLFKVERTLNKLRRTEFKVFLVGENSDDSNASLEMKGFPFQRSCTIYKGNT 180

Query: 183 IVAQTSLMHKLHQIWVRRGRFRLTIFPGSVDPALIVALVVIFFDGRM 228
           IVAQTSLMHKLHQI VRRGRFRLTIFPG+VDP+LIVAL+VIFFDGR+
Sbjct: 181 IVAQTSLMHKLHQICVRRGRFRLTIFPGTVDPSLIVALIVIFFDGRI 186

BLAST of Spg005742 vs. ExPASy TrEMBL
Match: A0A0A0K429 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G238420 PE=3 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 4.4e-76
Identity = 153/226 (67.70%), Postives = 170/226 (75.22%), Query Frame = 0

Query: 3   MANSSDPAICSATLPIPVDLFLSKKHPDLVTNSSGDIIYRLSRQSLKSSSIDKIVLLDA- 62
           MAN SDPAICS  LPIP+DLFLSK+HPD +TNSSGDIIYR++R +LKSSS+DKI+L  A 
Sbjct: 1   MANPSDPAICSPALPIPIDLFLSKQHPDYLTNSSGDIIYRINRHALKSSSVDKILLPHAD 60

Query: 63  AADPIISIYRASISFSFSLCDCLHVPNHVERKLEAPDSRKLECFRISGLHWSQKESWQGF 122
           AADP+ISI+R +                                         KESW+GF
Sbjct: 61  AADPLISIFRVN-----------------------------------------KESWEGF 120

Query: 123 KGDVGEQDLLFKMQRTLKKLRRTEFKVFLVGENLDDSNASLEMKGWPFQRSCTIYKGNTI 182
           KGDVGE++LLFK+QRTL KLRRTEFKVFLVG NLDDSNAS EMKGWPFQRSCT+Y GNTI
Sbjct: 121 KGDVGEENLLFKVQRTLNKLRRTEFKVFLVGGNLDDSNASFEMKGWPFQRSCTVYNGNTI 180

Query: 183 VAQTSLMHKLHQIWVRRGRFRLTIFPGSVDPALIVALVVIFFDGRM 228
           VAQTSLMHKL QIWVRRGRFRLTIFP SVDPALIVAL+VIFFDGRM
Sbjct: 181 VAQTSLMHKLRQIWVRRGRFRLTIFPSSVDPALIVALIVIFFDGRM 185

BLAST of Spg005742 vs. ExPASy TrEMBL
Match: A0A6J1KES0 (protein LURP-one-related 7 OS=Cucurbita maxima OX=3661 GN=LOC111493191 PE=3 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 9.9e-76
Identity = 159/228 (69.74%), Postives = 173/228 (75.88%), Query Frame = 0

Query: 3   MANSSDPAICSATLPIPVDLFLSKKHPDLVTNSSGDIIYRLSRQSLKSSSIDKIVLLD-- 62
           MA SSDPAIC+A LPIPVDLFLSKKHPD VT+SSGDII+RLSRQ LKSSSIDKIVL D  
Sbjct: 1   MAKSSDPAICAAPLPIPVDLFLSKKHPDHVTSSSGDIIFRLSRQYLKSSSIDKIVLHDAA 60

Query: 63  -AAADPIISIYRASISFSFSLCDCLHVPNHVERKLEAPDSRKLECFRISGLHWSQKESWQ 122
            AAA P+ISI+R +                                         KESWQ
Sbjct: 61  AAAAGPLISIHRVN-----------------------------------------KESWQ 120

Query: 123 GFKGDVGEQDLLFKMQRTLKKLRRTEFKVFLVGENLDDSNASLEMKGWPFQRSCTIYKGN 182
           GFKGD+GEQD LFK+QRTL KLRRTEFKVFLVGEN D+SNASLEMKG+PFQRSCTIYKGN
Sbjct: 121 GFKGDIGEQDSLFKVQRTLNKLRRTEFKVFLVGENSDESNASLEMKGFPFQRSCTIYKGN 180

Query: 183 TIVAQTSLMHKLHQIWVRRGRFRLTIFPGSVDPALIVALVVIFFDGRM 228
           TIVAQTSLMHKLHQI VRRGRFRLTIFPG+VDP+LIVAL+VIFFDGR+
Sbjct: 181 TIVAQTSLMHKLHQICVRRGRFRLTIFPGTVDPSLIVALIVIFFDGRI 187

BLAST of Spg005742 vs. ExPASy TrEMBL
Match: A0A6J1DNI1 (protein LURP-one-related 7 OS=Momordica charantia OX=3673 GN=LOC111022016 PE=3 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 9.9e-76
Identity = 159/228 (69.74%), Postives = 171/228 (75.00%), Query Frame = 0

Query: 3   MANSSD-PAICSATLPIPVDLFLSKKHPDLVTNSSGDIIYRLSRQSLKSSSIDKIVLLD- 62
           MANSS  PA CSA LPIPVDLFLS KHPD +TNSSGDII+RLSRQS KS SIDKI+LLD 
Sbjct: 1   MANSSSAPATCSAALPIPVDLFLSNKHPDYLTNSSGDIIFRLSRQSSKSPSIDKILLLDA 60

Query: 63  -AAADPIISIYRASISFSFSLCDCLHVPNHVERKLEAPDSRKLECFRISGLHWSQKESWQ 122
            AAADP+ISI+R S                                         KESW 
Sbjct: 61  AAAADPLISIHRHS-----------------------------------------KESWH 120

Query: 123 GFKGDVGEQDLLFKMQRTLKKLRRTEFKVFLVGENLDDSNASLEMKGWPFQRSCTIYKGN 182
           GFKGDVGE++LLFK+ R++ KL RTEFKVFL GENLDDSNASLEMKGWPFQRSCTIYKGN
Sbjct: 121 GFKGDVGEENLLFKVHRSINKLTRTEFKVFLHGENLDDSNASLEMKGWPFQRSCTIYKGN 180

Query: 183 TIVAQTSLMHKLHQIWVRRGRFRLTIFPGSVDPALIVALVVIFFDGRM 228
           TIVAQTSLMHKL+Q+WVRRGRFRLTIFPGSVDPALIVALVVIFFDGRM
Sbjct: 181 TIVAQTSLMHKLNQVWVRRGRFRLTIFPGSVDPALIVALVVIFFDGRM 187

BLAST of Spg005742 vs. ExPASy TrEMBL
Match: A0A1S3CIB3 (protein LURP-one-related 7 OS=Cucumis melo OX=3656 GN=LOC103501291 PE=3 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 5.4e-74
Identity = 148/226 (65.49%), Postives = 166/226 (73.45%), Query Frame = 0

Query: 3   MANSSDPAICSATLPIPVDLFLSKKHPDLVTNSSGDIIYRLSRQSLKSSSIDKIVLLDA- 62
           MANSSDP ICSA LPIP+DLFLSK+HP  +TNSSGDIIY+++R + KSSS+DKI+L  A 
Sbjct: 1   MANSSDPTICSAALPIPIDLFLSKEHPHYLTNSSGDIIYKINRHAFKSSSVDKILLPHAD 60

Query: 63  AADPIISIYRASISFSFSLCDCLHVPNHVERKLEAPDSRKLECFRISGLHWSQKESWQGF 122
           AADP+ISI+R +                                         KESW+GF
Sbjct: 61  AADPLISIFRVN-----------------------------------------KESWEGF 120

Query: 123 KGDVGEQDLLFKMQRTLKKLRRTEFKVFLVGENLDDSNASLEMKGWPFQRSCTIYKGNTI 182
           KGDVGE++LLFK+QRTL K RRTEF VFLVG NLDD N S EMKGWPFQRSCT+Y GNTI
Sbjct: 121 KGDVGEENLLFKVQRTLNKFRRTEFSVFLVGGNLDDPNTSFEMKGWPFQRSCTVYSGNTI 180

Query: 183 VAQTSLMHKLHQIWVRRGRFRLTIFPGSVDPALIVALVVIFFDGRM 228
           VAQTSLMHKLHQIWVRRGRFRLTIFP SVDPALIVAL+VIFFDGRM
Sbjct: 181 VAQTSLMHKLHQIWVRRGRFRLTIFPSSVDPALIVALIVIFFDGRM 185

BLAST of Spg005742 vs. TAIR 10
Match: AT2G30270.1 (Protein of unknown function (DUF567) )

HSP 1 Score: 125.9 bits (315), Expect = 4.0e-29
Identity = 89/209 (42.58%), Postives = 115/209 (55.02%), Query Frame = 0

Query: 18  IPVDLFLSKKHPDLVTNSSGDIIYRLSRQSLKSSSIDKIVLLDAAADPIISIYRASISFS 77
           IPVDLF SKK P L   SSGD+ +  S + L                  + I R S S  
Sbjct: 18  IPVDLFASKKLPGL---SSGDLGFADSSEHL------------------VFILRKSSSSL 77

Query: 78  FSLCDCLHVPNHVERKLEAPDSRKLECFRISGLHWSQKESWQGFKGDVGE-QDLLFKMQR 137
            SL D   VP                 F IS LH      W+  KGDV + +DL+  ++R
Sbjct: 78  KSLLDSSGVP----------------LFSISRLH---NGVWELHKGDVEKRKDLVLTVKR 137

Query: 138 TLKKLRRTEFKVFLVGENLDDSNASLEMKGWPFQRSCTIYKGNTIVAQTSLMHKLHQIWV 197
           T K+  +TE +V   GE    S+ +L +KG PFQ+SCTIY  ++IVAQTSLM+KL QI+V
Sbjct: 138 TSKRFSKTESEVSFAGE----SSENLVIKGVPFQKSCTIYSQDSIVAQTSLMYKLRQIYV 182

Query: 198 RRGRFRLTIFPGSVDPALIVALVVIFFDG 226
            R +FRLTIFPGS+D +L+VA+V IF  G
Sbjct: 198 GRSKFRLTIFPGSIDHSLVVAMVAIFLQG 182

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038884438.19.4e-8172.57protein LURP-one-related 7 [Benincasa hispida][more]
XP_022948358.12.2e-7770.93protein LURP-one-related 7 [Cucurbita moschata][more]
XP_023523465.18.3e-7770.31protein LURP-one-related 7 isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_023523464.11.1e-7670.00protein LURP-one-related 7 isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_004139831.19.1e-7667.70protein LURP-one-related 7 [Cucumis sativus] >KGN44278.1 hypothetical protein Cs... [more]
Match NameE-valueIdentityDescription
Q8GWL25.6e-2842.58Protein LURP-one-related 7 OS=Arabidopsis thaliana OX=3702 GN=At2g30270 PE=2 SV=... [more]
Match NameE-valueIdentityDescription
A0A6J1G9431.1e-7770.93protein LURP-one-related 7 OS=Cucurbita moschata OX=3662 GN=LOC111452060 PE=3 SV... [more]
A0A0A0K4294.4e-7667.70Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G238420 PE=3 SV=1[more]
A0A6J1KES09.9e-7669.74protein LURP-one-related 7 OS=Cucurbita maxima OX=3661 GN=LOC111493191 PE=3 SV=1[more]
A0A6J1DNI19.9e-7669.74protein LURP-one-related 7 OS=Momordica charantia OX=3673 GN=LOC111022016 PE=3 S... [more]
A0A1S3CIB35.4e-7465.49protein LURP-one-related 7 OS=Cucumis melo OX=3656 GN=LOC103501291 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT2G30270.14.0e-2942.58Protein of unknown function (DUF567) [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038595LURP-one-related superfamilyGENE3D2.40.160.200coord: 13..226
e-value: 4.8E-33
score: 116.3
IPR007612LURP-one-relatedPFAMPF04525LORcoord: 110..221
e-value: 3.4E-14
score: 52.9
IPR007612LURP-one-relatedPANTHERPTHR31087FAMILY NOT NAMEDcoord: 12..224
NoneNo IPR availablePANTHERPTHR31087:SF85PROTEIN LURP-ONE-RELATED 7coord: 12..224
IPR025659Tubby-like, C-terminalSUPERFAMILY54518Tubby C-terminal domain-likecoord: 97..222

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg005742.1Spg005742.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane