Spg005676 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg005676
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	DNA-directed RNA polymerase V subunit 5C-like
Location	scaffold8: 20833563 .. 20835418 (-)
RNA-Seq Expression	Spg005676
Synteny	Spg005676

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGAATTAGGCGAGGACGGCGACGCAAACCGTCTGCGAGAAGAGCAAGAAAAAGCTGCTGCAGAGGAAACTGGGCGCAAGGCCACCGCAGATGAAAACGCAGCCGAAGAAGGAGAAAGCACCGGCAAGCAGGCGCAAGATCCAGTCGCCGCAGAAATTGCCGCAACCAACTTAGCTATCATCGCGGCTGCTCTGGAAGTAGAATCTTCTGATTCCGAGGATGAGCTCCCCCTAACTCATCGCCGCAACATCCAGCCGACAGGGGTAGTCATCCAAAAACCCTCTGAAAGACCTGCGGCAGCCCCAAGCAATAAGAGGAAAGCGCCCACCGCATCTAAAAGCAAAGGAAAAGAAAAAAGTGGGCACAGGAAAAGGGAAGGTGGGCGACAACTGGGGAAAATTTCAAGAAGAATGAGGATTCAGCTGCACCCTCCCGCAAACGATGACTGAGCAGATCTCTCAGCGCAAATGGGAAACAGTTTGCGAGAACCCTCGCAACTACGCCCCTGCGCTAGTCCATGACTTCTACCGAGCACAGTGGCAAGAAGAAGTCAACGAAGTAATGGTTCGAGGCCACACAGTCGCATTCTCCTCCGCATGCATCAACAATGTATACGAGCTGCGAGATATCCCAAACGCGGAAGGGAATGCGCTCCTCGGCTGCCTCGACAACGACTTCCTGAGAGTAGTACTCCTTGCGATGGCCCGACCTGGAGCCAAGTGGGACGGCCACGACACTGCGAGAACCCTGAAGTCGCAGCTGCTTGACTTTGAAGCCACCTGCTGGATGCATTGGGTGAAGAACCGCATCATGCCCACAACGCATGATGCCACATTGAGCCTTCAACGGGTAATCCTTGTTTATTGCATCATGCAGGGAACCCCAATCGACTTGGGCCAGATCCTCGTCGAAACATTGCGCCAGACCGCCGCAAAACCTAAAGGCGCAATGTTTTGCCCAGGCCTTGTCACCCATTTATGCCGCACATCCGGCCTTGTGCCCGCAGTAGATGAAGAAATCCGACCCATGCGGAAGGACTTCGACGACCAATGGTGGACACGCGTGACCAGCACCCACGACAGGCGTTTGCAAGGAAGCACACAGCAACCAGCCTCCGCATCCCAACCCACCGAGCCTACGCCTGCGCCTGAAATACAAAAGAGAAAAAGGAGCAAGCAAACCGCAGGCCGAAACCCACCACCAGCCGCAAGGACCCCTCAATCTACTCCACCAGCGCAGGTAAGCACTGTCTGCGCCCAACCTCAGGTATCCTTGCCGCCAACGCAAGAAAGCTTGCCACCTCCTCCTCCTCCACCACCGCAAGAAAGCTTACCACCGCCACCACCAATTGTCTAGAACACACCTCCTCCGCAGCACGACGAAGACTTGCGATCAGAGGAGATTTTCGAAAGCCTCTTTCCCTAGTCCCCATCACAATGACGAAGTTCCTGTGCCGAGCCCGACACCGCAAGCCACAGCTTCTGCAAGCGCAAGACAGGCTGCGGCTAATCTATTGATTGATGTAGATTTAGCCCTTATCTTTTCGGAGTTGCGGCAGATAATACAAGAAGGTGTAGAGCCCCTTCGCCGGCAGCAAGAAAGGATGTGCCAGCAACAGGAATTGCTGCGAAAGCAACAAGATGAGCTGTCGCAGCGAGTAAATGCCTTAGTCCTTTTTCTGATGCGATGGACTAAAGGTTTTGGCAGCTTGCCAGCCACGCCCAACTTATTCGTACAGACAGTTTCGCCACAAAGACCCTCTAGCACTGGCCCATCCCAGGTGCACGGTTCCATGCCTCCGCCTGCGCCGAGGGATCCAAGAGCTCCACCACCACCGCCACCGCAGGGATAG

mRNA sequence

ATGGGAGAATTAGGCGAGGACGGCGACGCAAACCGTCTGCGAGAAGAGCAAGAAAAAGCTGCTGCAGAGGAAACTGGGCGCAAGGCCACCGCAGATGAAAACGCAGCCGAAGAAGGAGAAAGCACCGGCAAGCAGGCGCAAGATCCAGTCGCCGCAGAAATTGCCGCAACCAACTTAGCTATCATCGCGGCTGCTCTGGAAGTAGAATCTTCTGATTCCGAGGATGAGCTCCCCCTAACTCATCGCCGCAACATCCAGCCGACAGGGGTAGTCATCCAAAAACCCTCTGAAAGACCTGCGGCAGCCCCAAGCAATAAGAGGAAAGCGCCCACCGCATCTAAAAGCAAAGGAAAAGAAAAAAGTGGGCACAGGAAAAGGGAAGTTTGCGAGAACCCTCGCAACTACGCCCCTGCGCTAGTCCATGACTTCTACCGAGCACAGTGGCAAGAAGAAGTCAACGAAGTAATGGTTCGAGGCCACACAGTCGCATTCTCCTCCGCATGCATCAACAATGTATACGAGCTGCGAGATATCCCAAACGCGGAAGGGAATGCGCTCCTCGGCTGCCTCGACAACGACTTCCTGAGAGTAGTACTCCTTGCGATGGCCCGACCTGGAGCCAAGTGGGACGGCCACGACACTGCGAGAACCCTGAAGTCGCAGCTGCTTGACTTTGAAGCCACCTGCTGGATGCATTGGGTGAAGAACCGCATCATGCCCACAACGCATGATGCCACATTGAGCCTTCAACGGGTAATCCTTGTTTATTGCATCATGCAGGGAACCCCAATCGACTTGGGCCAGATCCTCGTCGAAACATTGCGCCAGACCGCCGCAAAACCTAAAGGCGCAATGTTTTGCCCAGGCCTTGTCACCCATTTATGCCGCACATCCGGCCTTGTGCCCGCAGTAGATGAAGAAATCCGACCCATGCGGAAGGACTTCGACGACCAATGGTGGACACGCGTGACCAGCACCCACGACAGGCGTTTGCAAGGAAGCACACAGCAACCAGCCTCCGCATCCCAACCCACCGAGCCTACGCCTGCGCCTGAAATACAAAAGAGAAAAAGGAGCAAGCAAACCGCAGGCCGAAACCCACCACCAGCCGCAAGGACCCCTCAATCTACTCCACCAGCGCAGAAAGCTTACCACCGCCACCACCAATTGTCTAGAACACACCTCCTCCGCAGCACGACGAAGACTTGCGATCAGAGGAGATTTTCGAAAGCCTCTTTCCCTAGTCCCCATCACAATGACGAAGTTCCTGTGCCGAGCCCGACACCGCAAGCCACAGCTTCTGCAAGCGCAAGACAGGCTGCGGCTAATCTATTGATTGATGTAGATTTAGCCCTTATCTTTTCGGAGTTGCGGCAGATAATACAAGAAGGTGTAGAGCCCCTTCGCCGGCAGCAAGAAAGGATGTGCCAGCAACAGGAATTGCTGCGAAAGCAACAAGATGAGCTGTCGCAGCGAGTAAATGCCTTAGTCCTTTTTCTGATGCGATGGACTAAAGGTTTTGGCAGCTTGCCAGCCACGCCCAACTTATTCGTACAGACAGTTTCGCCACAAAGACCCTCTAGCACTGGCCCATCCCAGGTGCACGGTTCCATGCCTCCGCCTGCGCCGAGGGATCCAAGAGCTCCACCACCACCGCCACCGCAGGGATAG

Coding sequence (CDS)

ATGGGAGAATTAGGCGAGGACGGCGACGCAAACCGTCTGCGAGAAGAGCAAGAAAAAGCTGCTGCAGAGGAAACTGGGCGCAAGGCCACCGCAGATGAAAACGCAGCCGAAGAAGGAGAAAGCACCGGCAAGCAGGCGCAAGATCCAGTCGCCGCAGAAATTGCCGCAACCAACTTAGCTATCATCGCGGCTGCTCTGGAAGTAGAATCTTCTGATTCCGAGGATGAGCTCCCCCTAACTCATCGCCGCAACATCCAGCCGACAGGGGTAGTCATCCAAAAACCCTCTGAAAGACCTGCGGCAGCCCCAAGCAATAAGAGGAAAGCGCCCACCGCATCTAAAAGCAAAGGAAAAGAAAAAAGTGGGCACAGGAAAAGGGAAGTTTGCGAGAACCCTCGCAACTACGCCCCTGCGCTAGTCCATGACTTCTACCGAGCACAGTGGCAAGAAGAAGTCAACGAAGTAATGGTTCGAGGCCACACAGTCGCATTCTCCTCCGCATGCATCAACAATGTATACGAGCTGCGAGATATCCCAAACGCGGAAGGGAATGCGCTCCTCGGCTGCCTCGACAACGACTTCCTGAGAGTAGTACTCCTTGCGATGGCCCGACCTGGAGCCAAGTGGGACGGCCACGACACTGCGAGAACCCTGAAGTCGCAGCTGCTTGACTTTGAAGCCACCTGCTGGATGCATTGGGTGAAGAACCGCATCATGCCCACAACGCATGATGCCACATTGAGCCTTCAACGGGTAATCCTTGTTTATTGCATCATGCAGGGAACCCCAATCGACTTGGGCCAGATCCTCGTCGAAACATTGCGCCAGACCGCCGCAAAACCTAAAGGCGCAATGTTTTGCCCAGGCCTTGTCACCCATTTATGCCGCACATCCGGCCTTGTGCCCGCAGTAGATGAAGAAATCCGACCCATGCGGAAGGACTTCGACGACCAATGGTGGACACGCGTGACCAGCACCCACGACAGGCGTTTGCAAGGAAGCACACAGCAACCAGCCTCCGCATCCCAACCCACCGAGCCTACGCCTGCGCCTGAAATACAAAAGAGAAAAAGGAGCAAGCAAACCGCAGGCCGAAACCCACCACCAGCCGCAAGGACCCCTCAATCTACTCCACCAGCGCAGAAAGCTTACCACCGCCACCACCAATTGTCTAGAACACACCTCCTCCGCAGCACGACGAAGACTTGCGATCAGAGGAGATTTTCGAAAGCCTCTTTCCCTAGTCCCCATCACAATGACGAAGTTCCTGTGCCGAGCCCGACACCGCAAGCCACAGCTTCTGCAAGCGCAAGACAGGCTGCGGCTAATCTATTGATTGATGTAGATTTAGCCCTTATCTTTTCGGAGTTGCGGCAGATAATACAAGAAGGTGTAGAGCCCCTTCGCCGGCAGCAAGAAAGGATGTGCCAGCAACAGGAATTGCTGCGAAAGCAACAAGATGAGCTGTCGCAGCGAGTAAATGCCTTAGTCCTTTTTCTGATGCGATGGACTAAAGGTTTTGGCAGCTTGCCAGCCACGCCCAACTTATTCGTACAGACAGTTTCGCCACAAAGACCCTCTAGCACTGGCCCATCCCAGGTGCACGGTTCCATGCCTCCGCCTGCGCCGAGGGATCCAAGAGCTCCACCACCACCGCCACCGCAGGGATAG

Protein sequence

MGELGEDGDANRLREEQEKAAAEETGRKATADENAAEEGESTGKQAQDPVAAEIAATNLAIIAAALEVESSDSEDELPLTHRRNIQPTGVVIQKPSERPAAAPSNKRKAPTASKSKGKEKSGHRKREVCENPRNYAPALVHDFYRAQWQEEVNEVMVRGHTVAFSSACINNVYELRDIPNAEGNALLGCLDNDFLRVVLLAMARPGAKWDGHDTARTLKSQLLDFEATCWMHWVKNRIMPTTHDATLSLQRVILVYCIMQGTPIDLGQILVETLRQTAAKPKGAMFCPGLVTHLCRTSGLVPAVDEEIRPMRKDFDDQWWTRVTSTHDRRLQGSTQQPASASQPTEPTPAPEIQKRKRSKQTAGRNPPPAARTPQSTPPAQKAYHRHHQLSRTHLLRSTTKTCDQRRFSKASFPSPHHNDEVPVPSPTPQATASASARQAAANLLIDVDLALIFSELRQIIQEGVEPLRRQQERMCQQQELLRKQQDELSQRVNALVLFLMRWTKGFGSLPATPNLFVQTVSPQRPSSTGPSQVHGSMPPPAPRDPRAPPPPPPQG

Homology

[Close]

BLAST of Spg005676 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])

HSP 1 Score: 109.0 bits (271), Expect = 1.3e-19
Identity = 72/224 (32.14%), Postives = 113/224 (50.45%), Query Frame = 0


Query: 123 HRKREVCENPRNYAPALVHDFYRAQWQEEVNEVMVRGHTVAFSSACINNVYELRDIPNAE 182
           H  ++ C +P +    LV +FY      E N V VRG  V++S   IN V+ L D P  E
Sbjct: 70  HNWKQFCAHPEDPIVPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAVFGLGD-PVDE 129

Query: 183 GNALLGCLDNDFLRVVLLAMARPGAKWD-GHDTARTLKSQLLDFEATCWMHWVKNRIMPT 242
            +  +  +    L  VL  +A  GA+W+     A T     L   A  W H++K+R++PT
Sbjct: 130 HSEFIQNITQQDLITVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPT 189

Query: 243 THDATLSLQRVILVYCIMQGTPIDLGQILVETLRQTAAKPKGAMFCPGLVTHLCRTSGLV 302
           TH  T+S  R++L++ ++ G  I++G+++   +R  AA+  GA+F P L+T LCR +   
Sbjct: 190 THGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNARAP 249

Query: 303 PAVDEEIRPMRKDFDDQWWTRVTSTHDRRLQGSTQQPASASQPT 346
             V+EE      + D     R+          STQQP+S+   T
Sbjct: 250 FLVNEEKLHNTGEIDAIAVARIAQEGPTE---STQQPSSSRPAT 289

[Close]

BLAST of Spg005676 vs. NCBI nr
Match: PON35554.1 (hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii])

HSP 1 Score: 105.5 bits (262), Expect = 1.5e-18
Identity = 69/224 (30.80%), Postives = 112/224 (50.00%), Query Frame = 0


Query: 123 HRKREVCENPRNYAPALVHDFYRAQWQEEVNEVMVRGHTVAFSSACINNVYELRDIPNAE 182
           H  ++ C +P +    LV +FY        N V VRG  V++S   IN V+ L D  +  
Sbjct: 61  HNWKQFCAHPEDPIVPLVREFYANLTDPVENTVYVRGVQVSWSEEAINAVFGLGDPVDEH 120

Query: 183 GNALLGCLDNDFLRVVLLAMARPGAKWD-GHDTARTLKSQLLDFEATCWMHWVKNRIMPT 242
              +    ++D +  VL  +A  GA+W+     A T     L   A  W H++K+ ++PT
Sbjct: 121 SEFIENITEHDLI-TVLETVAVAGAEWNVSAQGAYTCIRSALTPAAKVWFHFLKSHLLPT 180

Query: 243 THDATLSLQRVILVYCIMQGTPIDLGQILVETLRQTAAKPKGAMFCPGLVTHLCRTSGLV 302
           TH  T+S  R++L++ ++ G  I++G+++   +R  AA+  GA+F P L+T LCR +   
Sbjct: 181 THGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNARAP 240

Query: 303 PAVDEEIRPMRKDFDDQWWTRVTSTHDRRLQGSTQQPASASQPT 346
             V+EE      + D     R+T         STQQP+S+   T
Sbjct: 241 FLVNEEKLHNTGEIDAIAVARITQEGPTE---STQQPSSSRPAT 280

[Close]

BLAST of Spg005676 vs. NCBI nr
Match: KAE8661093.1 (hypothetical protein F3Y22_tig00116939pilonHSYRG00213 [Hibiscus syriacus])

HSP 1 Score: 104.0 bits (258), Expect = 4.3e-18
Identity = 56/194 (28.87%), Postives = 100/194 (51.55%), Query Frame = 0


Query: 126 REVCENPRNYAPALVHDFYRAQWQEEVNEVMVRGHTVAFSSACINNVYELRDI------- 185
           ++   +P +   +LV +FY   ++     + VRG  + F+S  IN+ + L+D+       
Sbjct: 64  QKFARHPGSVNASLVKEFYANIFKPNQYSIFVRGKKIRFTSTAINHYFHLQDVVDNHATF 123

Query: 186 -PNAEGNALLGCLDNDFLRVVLLAMARPGAKWDGHDTAR-TLKSQLLDFEATCWMHWVKN 245
              A+ N   G L++         +     +W+G  T+R ++  + L   A  W H++KN
Sbjct: 124 EEEADSNKYDGVLED---------LCFENTEWNGRQTSRYSVNRERLQPRAKLWNHFLKN 183

Query: 246 RIMPTTHDATLSLQRVILVYCIMQGTPIDLGQILVETLRQTAAKPKGAMFCPGLVTHLCR 305
           ++MPT+H+ T+SL R++L++ IM   PID+G I+V+ +     K   A+  P L+T LCR
Sbjct: 184 KLMPTSHNTTVSLSRLLLLHSIMVSRPIDVGCIIVQQVHDCLGKKASALVFPNLITTLCR 243

Query: 306 TSGLVPAVDEEIRP 311
              +     +EI P
Sbjct: 244 KKKVEENAFDEILP 248

[Close]

BLAST of Spg005676 vs. NCBI nr
Match: KAE8718449.1 (hypothetical protein F3Y22_tig00110013pilonHSYRG00240 [Hibiscus syriacus])

HSP 1 Score: 100.9 bits (250), Expect = 3.6e-17
Identity = 53/182 (29.12%), Postives = 101/182 (55.49%), Query Frame = 0


Query: 131 NPRNYAPALVHDFYRAQWQEEVNEVMVRGHTVAFSSACINNVYELRDIPNAEGNALL-GC 190
           +P +   +LV +FY    +   + + VRG  + F+S  IN  + L+++   +G+A+    
Sbjct: 69  HPGSVNASLVKEFYANISKPNQHSIFVRGKQIRFTSIAINRYFHLQEV--VDGHAMFEEE 128

Query: 191 LDNDFLRVVLLAMARPGAKWDGHDTAR-TLKSQLLDFEATCWMHWVKNRIMPTTHDATLS 250
            D++    VL  +     +W+G  T+R ++  + L   A  W H++K+++MPT+H+ T+S
Sbjct: 129 ADSNKYDGVLEDLCFENTEWNGRQTSRYSVNRERLQPRAKLWNHFLKHKLMPTSHNTTVS 188

Query: 251 LQRVILVYCIMQGTPIDLGQILVETLRQTAAKPKGAMFCPGLVTHLCRTSGLVPAVDEEI 310
           L R++L++ ++   PID+G+I+V+ +     K   A+  P L+T LCR   +     +EI
Sbjct: 189 LSRLLLLHSMIVSRPIDVGRIIVQQVHDCLGKKASALVFPNLITALCRKKKVEENAFDEI 248

[Close]

BLAST of Spg005676 vs. NCBI nr
Match: PON70375.1 (hypothetical protein PanWU01x14_080440 [Parasponia andersonii])

HSP 1 Score: 100.5 bits (249), Expect = 4.7e-17
Identity = 58/186 (31.18%), Postives = 97/186 (52.15%), Query Frame = 0


Query: 123 HRKREVCENPRNYAPALVHDFYRAQWQEEVNEVMVRGHTVAFSSACINNVYELRDIPNAE 182
           H  +  C +P +    LV +FY      + + V +RG  V  S   IN ++ L D P  E
Sbjct: 91  HNWQLFCAHPEDPIVPLVREFYTNMTNPDDDTVYIRGVQVPLSVEAINTIFSLGD-PIDE 150

Query: 183 GNALLGCLDNDFLRVVLLAMARPGAKWD-GHDTARTLKSQLLDFEATCWMHWVKNRIMPT 242
            +  +  +    L +VL  +A  GA+W+     A T     L+  A  W H++K+R++PT
Sbjct: 151 HSEFVEDITKPELVIVLETVAIVGAEWNVSSQGAYTCLRSSLNPPAKVWYHFLKSRLLPT 210

Query: 243 THDATLSLQRVILVYCIMQGTPIDLGQILVETLRQTAAKPKGAMFCPGLVTHLCRTSGLV 302
           TH  T+S + V L+Y ++ G  I++G+++   +   AA+  GA+F P L+T +CR +   
Sbjct: 211 THGKTVSKEHVSLLYSMLTGKSINVGRMIHREICACAARKSGALFFPSLITSMCRNTRAP 270

Query: 303 PAVDEE 308
             V+EE
Sbjct: 271 YLVNEE 275

[Close]

BLAST of Spg005676 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 6.5e-20
Identity = 72/224 (32.14%), Postives = 113/224 (50.45%), Query Frame = 0


Query: 123 HRKREVCENPRNYAPALVHDFYRAQWQEEVNEVMVRGHTVAFSSACINNVYELRDIPNAE 182
           H  ++ C +P +    LV +FY      E N V VRG  V++S   IN V+ L D P  E
Sbjct: 70  HNWKQFCAHPEDPIVPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAVFGLGD-PVDE 129

Query: 183 GNALLGCLDNDFLRVVLLAMARPGAKWD-GHDTARTLKSQLLDFEATCWMHWVKNRIMPT 242
            +  +  +    L  VL  +A  GA+W+     A T     L   A  W H++K+R++PT
Sbjct: 130 HSEFIQNITQQDLITVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPT 189

Query: 243 THDATLSLQRVILVYCIMQGTPIDLGQILVETLRQTAAKPKGAMFCPGLVTHLCRTSGLV 302
           TH  T+S  R++L++ ++ G  I++G+++   +R  AA+  GA+F P L+T LCR +   
Sbjct: 190 THGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNARAP 249

Query: 303 PAVDEEIRPMRKDFDDQWWTRVTSTHDRRLQGSTQQPASASQPT 346
             V+EE      + D     R+          STQQP+S+   T
Sbjct: 250 FLVNEEKLHNTGEIDAIAVARIAQEGPTE---STQQPSSSRPAT 289

[Close]

BLAST of Spg005676 vs. ExPASy TrEMBL
Match: A0A2P5AGA5 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_335450 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 7.1e-19
Identity = 69/224 (30.80%), Postives = 112/224 (50.00%), Query Frame = 0


Query: 123 HRKREVCENPRNYAPALVHDFYRAQWQEEVNEVMVRGHTVAFSSACINNVYELRDIPNAE 182
           H  ++ C +P +    LV +FY        N V VRG  V++S   IN V+ L D  +  
Sbjct: 61  HNWKQFCAHPEDPIVPLVREFYANLTDPVENTVYVRGVQVSWSEEAINAVFGLGDPVDEH 120

Query: 183 GNALLGCLDNDFLRVVLLAMARPGAKWD-GHDTARTLKSQLLDFEATCWMHWVKNRIMPT 242
              +    ++D +  VL  +A  GA+W+     A T     L   A  W H++K+ ++PT
Sbjct: 121 SEFIENITEHDLI-TVLETVAVAGAEWNVSAQGAYTCIRSALTPAAKVWFHFLKSHLLPT 180

Query: 243 THDATLSLQRVILVYCIMQGTPIDLGQILVETLRQTAAKPKGAMFCPGLVTHLCRTSGLV 302
           TH  T+S  R++L++ ++ G  I++G+++   +R  AA+  GA+F P L+T LCR +   
Sbjct: 181 THGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNARAP 240

Query: 303 PAVDEEIRPMRKDFDDQWWTRVTSTHDRRLQGSTQQPASASQPT 346
             V+EE      + D     R+T         STQQP+S+   T
Sbjct: 241 FLVNEEKLHNTGEIDAIAVARITQEGPTE---STQQPSSSRPAT 280

[Close]

BLAST of Spg005676 vs. ExPASy TrEMBL
Match: A0A6A2WM54 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00116939pilonHSYRG00213 PE=3 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.1e-18
Identity = 56/194 (28.87%), Postives = 100/194 (51.55%), Query Frame = 0


Query: 126 REVCENPRNYAPALVHDFYRAQWQEEVNEVMVRGHTVAFSSACINNVYELRDI------- 185
           ++   +P +   +LV +FY   ++     + VRG  + F+S  IN+ + L+D+       
Sbjct: 64  QKFARHPGSVNASLVKEFYANIFKPNQYSIFVRGKKIRFTSTAINHYFHLQDVVDNHATF 123

Query: 186 -PNAEGNALLGCLDNDFLRVVLLAMARPGAKWDGHDTAR-TLKSQLLDFEATCWMHWVKN 245
              A+ N   G L++         +     +W+G  T+R ++  + L   A  W H++KN
Sbjct: 124 EEEADSNKYDGVLED---------LCFENTEWNGRQTSRYSVNRERLQPRAKLWNHFLKN 183

Query: 246 RIMPTTHDATLSLQRVILVYCIMQGTPIDLGQILVETLRQTAAKPKGAMFCPGLVTHLCR 305
           ++MPT+H+ T+SL R++L++ IM   PID+G I+V+ +     K   A+  P L+T LCR
Sbjct: 184 KLMPTSHNTTVSLSRLLLLHSIMVSRPIDVGCIIVQQVHDCLGKKASALVFPNLITTLCR 243

Query: 306 TSGLVPAVDEEIRP 311
              +     +EI P
Sbjct: 244 KKKVEENAFDEILP 248

[Close]

BLAST of Spg005676 vs. ExPASy TrEMBL
Match: A0A6A3BU96 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110013pilonHSYRG00240 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.8e-17
Identity = 53/182 (29.12%), Postives = 101/182 (55.49%), Query Frame = 0


Query: 131 NPRNYAPALVHDFYRAQWQEEVNEVMVRGHTVAFSSACINNVYELRDIPNAEGNALL-GC 190
           +P +   +LV +FY    +   + + VRG  + F+S  IN  + L+++   +G+A+    
Sbjct: 69  HPGSVNASLVKEFYANISKPNQHSIFVRGKQIRFTSIAINRYFHLQEV--VDGHAMFEEE 128

Query: 191 LDNDFLRVVLLAMARPGAKWDGHDTAR-TLKSQLLDFEATCWMHWVKNRIMPTTHDATLS 250
            D++    VL  +     +W+G  T+R ++  + L   A  W H++K+++MPT+H+ T+S
Sbjct: 129 ADSNKYDGVLEDLCFENTEWNGRQTSRYSVNRERLQPRAKLWNHFLKHKLMPTSHNTTVS 188

Query: 251 LQRVILVYCIMQGTPIDLGQILVETLRQTAAKPKGAMFCPGLVTHLCRTSGLVPAVDEEI 310
           L R++L++ ++   PID+G+I+V+ +     K   A+  P L+T LCR   +     +EI
Sbjct: 189 LSRLLLLHSMIVSRPIDVGRIIVQQVHDCLGKKASALVFPNLITALCRKKKVEENAFDEI 248

[Close]

BLAST of Spg005676 vs. ExPASy TrEMBL
Match: A0A2P5DAQ2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_080440 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.3e-17
Identity = 58/186 (31.18%), Postives = 97/186 (52.15%), Query Frame = 0


Query: 123 HRKREVCENPRNYAPALVHDFYRAQWQEEVNEVMVRGHTVAFSSACINNVYELRDIPNAE 182
           H  +  C +P +    LV +FY      + + V +RG  V  S   IN ++ L D P  E
Sbjct: 91  HNWQLFCAHPEDPIVPLVREFYTNMTNPDDDTVYIRGVQVPLSVEAINTIFSLGD-PIDE 150

Query: 183 GNALLGCLDNDFLRVVLLAMARPGAKWD-GHDTARTLKSQLLDFEATCWMHWVKNRIMPT 242
            +  +  +    L +VL  +A  GA+W+     A T     L+  A  W H++K+R++PT
Sbjct: 151 HSEFVEDITKPELVIVLETVAIVGAEWNVSSQGAYTCLRSSLNPPAKVWYHFLKSRLLPT 210

Query: 243 THDATLSLQRVILVYCIMQGTPIDLGQILVETLRQTAAKPKGAMFCPGLVTHLCRTSGLV 302
           TH  T+S + V L+Y ++ G  I++G+++   +   AA+  GA+F P L+T +CR +   
Sbjct: 211 THGKTVSKEHVSLLYSMLTGKSINVGRMIHREICACAARKSGALFFPSLITSMCRNTRAP 270

Query: 303 PAVDEE 308
             V+EE
Sbjct: 271 YLVNEE 275

The following BLAST results are available for this feature:

BLAST of Spg005676 vs. NCBI nr


Match Name	E-value	Identity	Description
PON46472.1	1.3e-19	32.14	hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]	[more]
PON35554.1	1.5e-18	30.80	hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]	[more]
KAE8661093.1	4.3e-18	28.87	hypothetical protein F3Y22_tig00116939pilonHSYRG00213 [Hibiscus syriacus]	[more]
KAE8718449.1	3.6e-17	29.12	hypothetical protein F3Y22_tig00110013pilonHSYRG00240 [Hibiscus syriacus]	[more]
PON70375.1	4.7e-17	31.18	hypothetical protein PanWU01x14_080440 [Parasponia andersonii]	[more]

BLAST of Spg005676 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg005676 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2P5BCG4	6.5e-20	32.14	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]
A0A2P5AGA5	7.1e-19	30.80	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]
A0A6A2WM54	2.1e-18	28.87	Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00116939pilon...	[more]
A0A6A3BU96	1.8e-17	29.12	Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110013pilon...	[more]
A0A2P5DAQ2	2.3e-17	31.18	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_080440 PE...	[more]

BLAST of Spg005676 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 327..435
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 366..382
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 327..349
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 519..556
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..130
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 519..535
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 536..556
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg005676.1	Spg005676.1	mRNA