Spg005371 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg005371
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	MADS-box domain-containing protein
Location	scaffold5: 5460792 .. 5461139 (+)
RNA-Seq Expression	Spg005371
Synteny	Spg005371

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGAGGAAGAAGGTGAAGCTCGTATGGATTGCAAGCGACAATGCAAGAAAAGCCAGTTTCAAGAAGCGAAGGCTCGGATTAATGAAGAAAGTGAGCGAACTCACCACTCTCTGCGGCGTTTACGCCTTCGCCGTCGTCTACGGCCCCGACGACGACCATCCGGTCATCTGGCCGTCCCTCTCCGCCGCTCAACACCTCTACAGACGCTTCCACAGCCTGCCGGAGGTCGAACGCCAGAAGAAACTGACGAACCAAGAGACCTATCTCAAGGAACGCACCGCCAAGGCACAGGACCTGTTGAAGAAGCACATCAAGAAGAATCAGGAACTCGAATCGACCTTCTGA

mRNA sequence

ATGACGAGGAAGAAGGTGAAGCTCGTATGGATTGCAAGCGACAATGCAAGAAAAGCCAGTTTCAAGAAGCGAAGGCTCGGATTAATGAAGAAAGTGAGCGAACTCACCACTCTCTGCGGCGTTTACGCCTTCGCCGTCGTCTACGGCCCCGACGACGACCATCCGGTCATCTGGCCGTCCCTCTCCGCCGCTCAACACCTCTACAGACGCTTCCACAGCCTGCCGGAGGTCGAACGCCAGAAGAAACTGACGAACCAAGAGACCTATCTCAAGGAACGCACCGCCAAGGCACAGGACCTGTTGAAGAAGCACATCAAGAAGAATCAGGAACTCGAATCGACCTTCTGA

Coding sequence (CDS)

ATGACGAGGAAGAAGGTGAAGCTCGTATGGATTGCAAGCGACAATGCAAGAAAAGCCAGTTTCAAGAAGCGAAGGCTCGGATTAATGAAGAAAGTGAGCGAACTCACCACTCTCTGCGGCGTTTACGCCTTCGCCGTCGTCTACGGCCCCGACGACGACCATCCGGTCATCTGGCCGTCCCTCTCCGCCGCTCAACACCTCTACAGACGCTTCCACAGCCTGCCGGAGGTCGAACGCCAGAAGAAACTGACGAACCAAGAGACCTATCTCAAGGAACGCACCGCCAAGGCACAGGACCTGTTGAAGAAGCACATCAAGAAGAATCAGGAACTCGAATCGACCTTCTGA

Protein sequence

MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDLLKKHIKKNQELESTF

Homology

[Close]

BLAST of Spg005371 vs. NCBI nr
Match: XP_023539789.1 (uncharacterized protein LOC111800368 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 217.6 bits (553), Expect = 5.5e-53
Identity = 109/112 (97.32%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPS 60
           MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDD+PVIWPS
Sbjct: 1   MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDNPVIWPS 60

Query: 61  LSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDLLKKHIKKNQELE 113
           LSAAQHLYRRFHSLPEVERQKK+TNQETYLKERTAKAQDLLKKH+KKNQELE
Sbjct: 61  LSAAQHLYRRFHSLPEVERQKKMTNQETYLKERTAKAQDLLKKHMKKNQELE 112

[Close]

BLAST of Spg005371 vs. NCBI nr
Match: KAG7028164.1 (Agamous-like MADS-box protein AGL80, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 217.6 bits (553), Expect = 5.5e-53
Identity = 109/112 (97.32%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPS 60
           MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDD+PVIWPS
Sbjct: 1   MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDNPVIWPS 60

Query: 61  LSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDLLKKHIKKNQELE 113
           LSAAQHLYRRFHSLPEVERQKK+TNQETYLKERTAKAQDLLKKH+KKNQELE
Sbjct: 61  LSAAQHLYRRFHSLPEVERQKKMTNQETYLKERTAKAQDLLKKHMKKNQELE 112

[Close]

BLAST of Spg005371 vs. NCBI nr
Match: KAG6596626.1 (Agamous-like MADS-box protein AGL80, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 217.6 bits (553), Expect = 5.5e-53
Identity = 109/112 (97.32%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPS 60
           MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDD+PVIWPS
Sbjct: 1   MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDNPVIWPS 60

Query: 61  LSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDLLKKHIKKNQELE 113
           LSAAQHLYRRFHSLPEVERQKK+TNQETYLKERTAKAQDLLKKH+KKNQELE
Sbjct: 61  LSAAQHLYRRFHSLPEVERQKKMTNQETYLKERTAKAQDLLKKHMKKNQELE 112

[Close]

BLAST of Spg005371 vs. NCBI nr
Match: XP_022936706.1 (MADS-box transcription factor PHERES 1-like [Cucurbita moschata])

HSP 1 Score: 217.6 bits (553), Expect = 5.5e-53
Identity = 109/112 (97.32%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPS 60
           MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDD+PVIWPS
Sbjct: 1   MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDNPVIWPS 60

Query: 61  LSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDLLKKHIKKNQELE 113
           LSAAQHLYRRFHSLPEVERQKK+TNQETYLKERTAKAQDLLKKH+KKNQELE
Sbjct: 61  LSAAQHLYRRFHSLPEVERQKKMTNQETYLKERTAKAQDLLKKHMKKNQELE 112

[Close]

BLAST of Spg005371 vs. NCBI nr
Match: XP_023005873.1 (uncharacterized protein LOC111498747 [Cucurbita maxima])

HSP 1 Score: 217.6 bits (553), Expect = 5.5e-53
Identity = 109/112 (97.32%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPS 60
           MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDD+PVIWPS
Sbjct: 1   MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDNPVIWPS 60

Query: 61  LSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDLLKKHIKKNQELE 113
           LSAAQHLYRRFHSLPEVERQKK+TNQETYLKERTAKAQDLLKKH+KKNQELE
Sbjct: 61  LSAAQHLYRRFHSLPEVERQKKMTNQETYLKERTAKAQDLLKKHMKKNQELE 112

[Close]

BLAST of Spg005371 vs. ExPASy Swiss-Prot
Match: Q9FJK3 (Agamous-like MADS-box protein AGL80 OS=Arabidopsis thaliana OX=3702 GN=AGL80 PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 8.3e-28
Identity = 60/114 (52.63%), Postives = 87/114 (76.32%), Query Frame = 0


Query: 1   MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPS 60
           MTRKKVKL +I++D++RKA+FKKR+ GLMKKV EL+TLCG+ A A++Y P D +P +WPS
Sbjct: 1   MTRKKVKLAYISNDSSRKATFKKRKKGLMKKVHELSTLCGITACAIIYSPYDTNPEVWPS 60

Query: 61  LSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDLLKKHIKKNQELEST 115
            S  Q +   F +LPE+++ KK+ +QE +LK+R AKA + L++  K ++ELE T
Sbjct: 61  NSGVQRVVSEFRTLPEMDQHKKMVDQEGFLKQRIAKATETLRRQRKDSRELEMT 114

[Close]

BLAST of Spg005371 vs. ExPASy Swiss-Prot
Match: Q7XJK6 (Agamous-like MADS-box protein AGL36 OS=Arabidopsis thaliana OX=3702 GN=AGL36 PE=1 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 7.1e-19
Identity = 52/109 (47.71%), Postives = 71/109 (65.14%), Query Frame = 0


Query: 4   KKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSA 63
           KKVKL  IA++ +RK SF KR+ G+ KK+ EL+TLCGV A A++Y P    P  WPS   
Sbjct: 2   KKVKLSLIANERSRKTSFIKRKDGIFKKLHELSTLCGVQACALIYSPFIPVPESWPSREG 61

Query: 64  AQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDLLKKHIKKNQELE 113
           A+ +  RF  +P   R KK+ +QETYL ER  KA++ LK    +N+EL+
Sbjct: 62  AKKVASRFLEMPPTARTKKMMDQETYLMERITKAKEQLKNLAAENRELQ 110

[Close]

BLAST of Spg005371 vs. ExPASy Swiss-Prot
Match: Q7XJK5 (Agamous-like MADS-box protein AGL90 OS=Arabidopsis thaliana OX=3702 GN=AGL90 PE=1 SV=2)

HSP 1 Score: 92.0 bits (227), Expect = 4.6e-18
Identity = 49/109 (44.95%), Postives = 71/109 (65.14%), Query Frame = 0


Query: 4   KKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSA 63
           KKVKL  IA++ +RK SF KR+ G+ KK+ EL+TLCGV A A++Y P    P  WPS   
Sbjct: 2   KKVKLSLIANERSRKTSFMKRKNGIFKKLHELSTLCGVQACALIYSPFIPVPESWPSREG 61

Query: 64  AQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDLLKKHIKKNQELE 113
           A+ +  +F  +P   R +K+ +QET+L ER  KA++ LK    +N+EL+
Sbjct: 62  AKKVASKFLEMPRTARTRKMMDQETHLMERITKAKEQLKNLAAENRELQ 110

[Close]

BLAST of Spg005371 vs. ExPASy Swiss-Prot
Match: Q7XJK8 (MADS-box transcription factor PHERES 2 OS=Arabidopsis thaliana OX=3702 GN=PHE2 PE=1 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.6e-15
Identity = 42/101 (41.58%), Postives = 66/101 (65.35%), Query Frame = 0


Query: 3   RKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLS 62
           ++K+KL  I +  +RK +F KR+ G+ KK++EL TLCGV A AVVY P +  P  WPS  
Sbjct: 2   KRKMKLSLIENSVSRKTTFTKRKKGMTKKLTELVTLCGVEACAVVYSPFNSIPEAWPSRE 61

Query: 63  AAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDLLKK 104
             + +  +F  L  ++R KK+ +QET++ +R AK ++ L+K
Sbjct: 62  GVEDVVSKFMELSVLDRTKKMVDQETFISQRIAKEKEQLQK 102

[Close]

BLAST of Spg005371 vs. ExPASy Swiss-Prot
Match: Q9C6V4 (Agamous-like MADS-box protein AGL92 OS=Arabidopsis thaliana OX=3702 GN=AGL92 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 4.7e-15
Identity = 43/110 (39.09%), Postives = 67/110 (60.91%), Query Frame = 0


Query: 3   RKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLS 62
           R K KLV I   + R+A+F+KR  G+ KK+ ELTTLC + A AV+Y P  ++P +WPS  
Sbjct: 2   RTKTKLVLIPDRHFRRATFRKRNAGIRKKLHELTTLCDIKACAVIYSP-FENPTVWPSTE 61

Query: 63  AAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDLLKKHIKKNQELE 113
             Q +   F   P  ER K + + ET+L+++  K Q+ L+   ++N+E +
Sbjct: 62  GVQEVISEFMEKPATERSKTMMSHETFLRDQITKEQNKLESLRRENRETQ 110

[Close]

BLAST of Spg005371 vs. ExPASy TrEMBL
Match: A0A6J1L3D4 (uncharacterized protein LOC111498747 OS=Cucurbita maxima OX=3661 GN=LOC111498747 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 2.7e-53
Identity = 109/112 (97.32%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPS 60
           MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDD+PVIWPS
Sbjct: 1   MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDNPVIWPS 60

Query: 61  LSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDLLKKHIKKNQELE 113
           LSAAQHLYRRFHSLPEVERQKK+TNQETYLKERTAKAQDLLKKH+KKNQELE
Sbjct: 61  LSAAQHLYRRFHSLPEVERQKKMTNQETYLKERTAKAQDLLKKHMKKNQELE 112

[Close]

BLAST of Spg005371 vs. ExPASy TrEMBL
Match: A0A6J1F887 (MADS-box transcription factor PHERES 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443217 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 2.7e-53
Identity = 109/112 (97.32%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPS 60
           MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDD+PVIWPS
Sbjct: 1   MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDNPVIWPS 60

Query: 61  LSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDLLKKHIKKNQELE 113
           LSAAQHLYRRFHSLPEVERQKK+TNQETYLKERTAKAQDLLKKH+KKNQELE
Sbjct: 61  LSAAQHLYRRFHSLPEVERQKKMTNQETYLKERTAKAQDLLKKHMKKNQELE 112

[Close]

BLAST of Spg005371 vs. ExPASy TrEMBL
Match: A0A0A0LB39 (MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G782720 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.1e-51
Identity = 106/112 (94.64%), Postives = 109/112 (97.32%), Query Frame = 0


Query: 1   MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPS 60
           MTRKKVKLVWIASDNARKASFKKRRLGL+KKVSELTTLCGVYAFAVV GPD+DHPVIWPS
Sbjct: 1   MTRKKVKLVWIASDNARKASFKKRRLGLLKKVSELTTLCGVYAFAVVTGPDEDHPVIWPS 60

Query: 61  LSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDLLKKHIKKNQELE 113
           LSAAQHLYRRFHSLPEVERQKK+TNQETYLKERT K QDLLKKHIKKNQELE
Sbjct: 61  LSAAQHLYRRFHSLPEVERQKKMTNQETYLKERTTKTQDLLKKHIKKNQELE 112

[Close]

BLAST of Spg005371 vs. ExPASy TrEMBL
Match: A0A1S3B6W2 (uncharacterized protein LOC103486691 OS=Cucumis melo OX=3656 GN=LOC103486691 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.5e-51
Identity = 105/112 (93.75%), Postives = 109/112 (97.32%), Query Frame = 0


Query: 1   MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPS 60
           MTRKKVKLVWIASDNARKASFKKRRLGL+KKVSELTTLCGVYAFAV+ GPD+DHPVIWPS
Sbjct: 1   MTRKKVKLVWIASDNARKASFKKRRLGLLKKVSELTTLCGVYAFAVINGPDEDHPVIWPS 60

Query: 61  LSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDLLKKHIKKNQELE 113
           LSAAQHLYRRFHSLPEVERQKK+TNQETYLKERT K QDLLKKHIKKNQELE
Sbjct: 61  LSAAQHLYRRFHSLPEVERQKKMTNQETYLKERTTKTQDLLKKHIKKNQELE 112

[Close]

BLAST of Spg005371 vs. ExPASy TrEMBL
Match: A0A6J1DC53 (uncharacterized protein LOC111019363 OS=Momordica charantia OX=3673 GN=LOC111019363 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.8e-50
Identity = 105/112 (93.75%), Postives = 108/112 (96.43%), Query Frame = 0


Query: 1   MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPS 60
           MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVV+GPDDDHPVIWPS
Sbjct: 1   MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVHGPDDDHPVIWPS 60

Query: 61  LSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDLLKKHIKKNQELE 113
            SAAQ LYRRF SLPEVERQKK+TNQETYLKERTAKAQD LKKHIKKNQ+LE
Sbjct: 61  RSAAQQLYRRFQSLPEVERQKKMTNQETYLKERTAKAQDQLKKHIKKNQDLE 112

[Close]

BLAST of Spg005371 vs. TAIR 10
Match: AT5G48670.1 (AGAMOUS-like 80 )

HSP 1 Score: 124.4 bits (311), Expect = 5.9e-29
Identity = 60/114 (52.63%), Postives = 87/114 (76.32%), Query Frame = 0


Query: 1   MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPS 60
           MTRKKVKL +I++D++RKA+FKKR+ GLMKKV EL+TLCG+ A A++Y P D +P +WPS
Sbjct: 1   MTRKKVKLAYISNDSSRKATFKKRKKGLMKKVHELSTLCGITACAIIYSPYDTNPEVWPS 60

Query: 61  LSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDLLKKHIKKNQELEST 115
            S  Q +   F +LPE+++ KK+ +QE +LK+R AKA + L++  K ++ELE T
Sbjct: 61  NSGVQRVVSEFRTLPEMDQHKKMVDQEGFLKQRIAKATETLRRQRKDSRELEMT 114

[Close]

BLAST of Spg005371 vs. TAIR 10
Match: AT2G40210.1 (AGAMOUS-like 48 )

HSP 1 Score: 110.9 bits (276), Expect = 6.8e-25
Identity = 57/110 (51.82%), Postives = 76/110 (69.09%), Query Frame = 0


Query: 1   MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPS 60
           MTRKKVKLVWI +D +R  S +K R+GL+KKV ELT LC V A  +++ PD   P++WPS
Sbjct: 1   MTRKKVKLVWIENDKSRATSLQKMRVGLLKKVKELTILCAVRAIVIIFSPDKVGPLVWPS 60

Query: 61  LSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDLLKKHIKKNQE 111
             A   L   F +LP+  ++KK +N E+YLKE+T K Q+ LKK  KKN+E
Sbjct: 61  PQATHGLLDEFFALPKSVQKKKESNVESYLKEKTHKFQEQLKKSKKKNKE 110

[Close]

BLAST of Spg005371 vs. TAIR 10
Match: AT5G26630.1 (MADS-box transcription factor family protein )

HSP 1 Score: 101.7 bits (252), Expect = 4.1e-22
Identity = 52/112 (46.43%), Postives = 79/112 (70.54%), Query Frame = 0


Query: 1   MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPS 60
           MTR+KVK+ +I ++ ARK++FKKR+ GL+KK  EL  LCGV  FAVV  P + +P +WPS
Sbjct: 1   MTRQKVKMTFIENETARKSTFKKRKKGLLKKAQELGILCGVPIFAVVNSPYELNPEVWPS 60

Query: 61  LSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDLLKKHIKKNQELE 113
             AA  +  ++ ++  +++ KK+ NQET+L++R  KA +  KK  K+N+ELE
Sbjct: 61  REAANQVVSQWKTMSVMDKTKKMVNQETFLQQRITKATESWKKLRKENKELE 112

[Close]

BLAST of Spg005371 vs. TAIR 10
Match: AT5G26650.1 (AGAMOUS-like 36 )

HSP 1 Score: 94.7 bits (234), Expect = 5.0e-20
Identity = 52/109 (47.71%), Postives = 71/109 (65.14%), Query Frame = 0


Query: 4   KKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSA 63
           KKVKL  IA++ +RK SF KR+ G+ KK+ EL+TLCGV A A++Y P    P  WPS   
Sbjct: 2   KKVKLSLIANERSRKTSFIKRKDGIFKKLHELSTLCGVQACALIYSPFIPVPESWPSREG 61

Query: 64  AQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDLLKKHIKKNQELE 113
           A+ +  RF  +P   R KK+ +QETYL ER  KA++ LK    +N+EL+
Sbjct: 62  AKKVASRFLEMPPTARTKKMMDQETYLMERITKAKEQLKNLAAENRELQ 110

[Close]

BLAST of Spg005371 vs. TAIR 10
Match: AT5G27960.1 (AGAMOUS-like 90 )

HSP 1 Score: 92.0 bits (227), Expect = 3.3e-19
Identity = 49/109 (44.95%), Postives = 71/109 (65.14%), Query Frame = 0


Query: 4   KKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSA 63
           KKVKL  IA++ +RK SF KR+ G+ KK+ EL+TLCGV A A++Y P    P  WPS   
Sbjct: 2   KKVKLSLIANERSRKTSFMKRKNGIFKKLHELSTLCGVQACALIYSPFIPVPESWPSREG 61

Query: 64  AQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDLLKKHIKKNQELE 113
           A+ +  +F  +P   R +K+ +QET+L ER  KA++ LK    +N+EL+
Sbjct: 62  AKKVASKFLEMPRTARTRKMMDQETHLMERITKAKEQLKNLAAENRELQ 110

The following BLAST results are available for this feature:

BLAST of Spg005371 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023539789.1	5.5e-53	97.32	uncharacterized protein LOC111800368 [Cucurbita pepo subsp. pepo]	[more]
KAG7028164.1	5.5e-53	97.32	Agamous-like MADS-box protein AGL80, partial [Cucurbita argyrosperma subsp. argy...	[more]
KAG6596626.1	5.5e-53	97.32	Agamous-like MADS-box protein AGL80, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_022936706.1	5.5e-53	97.32	MADS-box transcription factor PHERES 1-like [Cucurbita moschata]	[more]
XP_023005873.1	5.5e-53	97.32	uncharacterized protein LOC111498747 [Cucurbita maxima]	[more]

BLAST of Spg005371 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJK3	8.3e-28	52.63	Agamous-like MADS-box protein AGL80 OS=Arabidopsis thaliana OX=3702 GN=AGL80 PE=...	[more]
Q7XJK6	7.1e-19	47.71	Agamous-like MADS-box protein AGL36 OS=Arabidopsis thaliana OX=3702 GN=AGL36 PE=...	[more]
Q7XJK5	4.6e-18	44.95	Agamous-like MADS-box protein AGL90 OS=Arabidopsis thaliana OX=3702 GN=AGL90 PE=...	[more]
Q7XJK8	1.6e-15	41.58	MADS-box transcription factor PHERES 2 OS=Arabidopsis thaliana OX=3702 GN=PHE2 P...	[more]
Q9C6V4	4.7e-15	39.09	Agamous-like MADS-box protein AGL92 OS=Arabidopsis thaliana OX=3702 GN=AGL92 PE=...	[more]

BLAST of Spg005371 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L3D4	2.7e-53	97.32	uncharacterized protein LOC111498747 OS=Cucurbita maxima OX=3661 GN=LOC111498747...	[more]
A0A6J1F887	2.7e-53	97.32	MADS-box transcription factor PHERES 1-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A0A0LB39	1.1e-51	94.64	MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G782720 PE...	[more]
A0A1S3B6W2	1.5e-51	93.75	uncharacterized protein LOC103486691 OS=Cucumis melo OX=3656 GN=LOC103486691 PE=...	[more]
A0A6J1DC53	2.8e-50	93.75	uncharacterized protein LOC111019363 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]

BLAST of Spg005371 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48670.1	5.9e-29	52.63	AGAMOUS-like 80	[more]
AT2G40210.1	6.8e-25	51.82	AGAMOUS-like 48	[more]
AT5G26630.1	4.1e-22	46.43	MADS-box transcription factor family protein	[more]
AT5G26650.1	5.0e-20	47.71	AGAMOUS-like 36	[more]
AT5G27960.1	3.3e-19	44.95	AGAMOUS-like 90	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 94..114
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 2..112
None	No IPR available	PANTHER	PTHR11945:SF521	AGAMOUS-LIKE 48	coord: 2..112
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 23..38 score: 61.28 coord: 3..23 score: 30.94
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 e-value: 5.2E-17 score: 72.5
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 11..52 e-value: 1.2E-14 score: 53.6
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..49 score: 14.493071
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 14..98 e-value: 2.1E-14 score: 55.3
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 2..94
IPR033897	MADS SRF-like	CDD	cd00266	MADS_SRF_like	coord: 2..85 e-value: 5.37825E-26 score: 90.7823

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg005371.1	Spg005371.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0000987	cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding