Spg005355 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg005355
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	WD_REPEATS_REGION domain-containing protein
Location	scaffold6: 36500870 .. 36501740 (+)
RNA-Seq Expression	Spg005355
Synteny	Spg005355

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTAGAGAGTTTTATTGTAATAAGTGAAGATGATTGAATTTAATCTGTTTAATGCTTTGTTTGTGTTGTATGTGGTGTATAGAAGACGTGTTTTTTTAATTGATGTGGAAGTAATTACTTAAAACTTTTGTAGGTAGGGGTATAAATTTTTGTACCTAATATGTCCCATCACCACGGGGATGCTACTTATTACGTCGTTGATGACTACGAAATGGAGGACATTGATGATGATATGAATGATAAAAATCATGATAGAGAAGTGAAAGGCTCAGATTCTGATGCTGATGAGTTCAACTCGGTTTGTGATATATAGGATTTAAATTTACTCATACTGATCTCTGTATGGTCACCAAATTTTTGCATTCATGTATTATATGTCTTCTATATGTTGAACTTATTCTGGTTGTTTAATTTGTGCCAACTCTTAATGTTGGGCTTATTGAACATTTGAATTCTGGATGGCACTATATACAGAGTAGTAGAATAGTTGATACCACTGCAGCTCAAGCGAGAAGAGGAAAAGACATTCAAGGCATTCCTTGGGAGAGACTTAGCGTCACTAGAGAGAAGTATAGGAAAACTAGGCTTGAAAAGTACAAGAACTATGAGAATATCCCTAATTCAGGCGAAGGGTTAGTGAAGGTAAATGATCCCTATCCCATGCTCTGCTACCCCCAAGTTGTGAGCTATATTTTCCGTTGTTCATTCCACTTTTTTATTTATGGCTTTTTCAATAATGTATGAACAGGTTTGCAAGGCTACTGATAAAGGATGTTCATACTATGAATTTCACCGAAATTCAAGATCTGTGAAACCAACCATTCTTCATTTTCAGGTTTGCTTAATCAATTCTTCTGTGAAATCGACTTGA

mRNA sequence

ATGTCCCATCACCACGGGGATGCTACTTATTACGTCGTTGATGACTACGAAATGGAGGACATTGATGATGATATGAATGATAAAAATCATGATAGAGAAGTGAAAGGCTCAGATTCTGATGCTGATGAGTTCAACTCGAGTAGTAGAATAGTTGATACCACTGCAGCTCAAGCGAGAAGAGGAAAAGACATTCAAGGCATTCCTTGGGAGAGACTTAGCGTCACTAGAGAGAAGTATAGGAAAACTAGGCTTGAAAAGTACAAGAACTATGAGAATATCCCTAATTCAGGCGAAGGGTTAGTGAAGGTTTGCAAGGCTACTGATAAAGGATGTTCATACTATGAATTTCACCGAAATTCAAGATCTGTGAAACCAACCATTCTTCATTTTCAGGTTTGCTTAATCAATTCTTCTGTGAAATCGACTTGA

Coding sequence (CDS)

ATGTCCCATCACCACGGGGATGCTACTTATTACGTCGTTGATGACTACGAAATGGAGGACATTGATGATGATATGAATGATAAAAATCATGATAGAGAAGTGAAAGGCTCAGATTCTGATGCTGATGAGTTCAACTCGAGTAGTAGAATAGTTGATACCACTGCAGCTCAAGCGAGAAGAGGAAAAGACATTCAAGGCATTCCTTGGGAGAGACTTAGCGTCACTAGAGAGAAGTATAGGAAAACTAGGCTTGAAAAGTACAAGAACTATGAGAATATCCCTAATTCAGGCGAAGGGTTAGTGAAGGTTTGCAAGGCTACTGATAAAGGATGTTCATACTATGAATTTCACCGAAATTCAAGATCTGTGAAACCAACCATTCTTCATTTTCAGGTTTGCTTAATCAATTCTTCTGTGAAATCGACTTGA

Protein sequence

MSHHHGDATYYVVDDYEMEDIDDDMNDKNHDREVKGSDSDADEFNSSSRIVDTTAAQARRGKDIQGIPWERLSVTREKYRKTRLEKYKNYENIPNSGEGLVKVCKATDKGCSYYEFHRNSRSVKPTILHFQVCLINSSVKST

Homology

[Close]

BLAST of Spg005355 vs. NCBI nr
Match: XP_022158966.1 (uncharacterized WD repeat-containing protein C2A9.03-like [Momordica charantia] >XP_022158967.1 uncharacterized WD repeat-containing protein C2A9.03-like [Momordica charantia] >XP_022158968.1 uncharacterized WD repeat-containing protein C2A9.03-like [Momordica charantia] >XP_022158969.1 uncharacterized WD repeat-containing protein C2A9.03-like [Momordica charantia])

HSP 1 Score: 222.6 bits (566), Expect = 2.1e-54
Identity = 109/132 (82.58%), Postives = 121/132 (91.67%), Query Frame = 0


Query: 1   MSHHHGDATYYVVDDYEMEDIDDDMNDKNHDREVKGSDSDADEFNSSSRIVDTTAAQARR 60
           MSH+ GD T Y+ D+YEMEDIDDDM+D+ H+REV+GSDSDADEFNS+SRIVDTTAAQARR
Sbjct: 1   MSHYQGDDTDYMADEYEMEDIDDDMDDEYHEREVEGSDSDADEFNSNSRIVDTTAAQARR 60

Query: 61  GKDIQGIPWERLSVTREKYRKTRLEKYKNYENIPNSGEGLVKVCKATDKGCSYYEFHRNS 120
           GKDIQGIPWERLS+TREKYRKTRLE+YKNYENIPNSGEG  K CK T+KGCSYYEF RNS
Sbjct: 61  GKDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGEGSEKDCKVTEKGCSYYEFRRNS 120

Query: 121 RSVKPTILHFQV 133
           RSVK TILHFQ+
Sbjct: 121 RSVKSTILHFQL 132

[Close]

BLAST of Spg005355 vs. NCBI nr
Match: XP_038905113.1 (uncharacterized WD repeat-containing protein C2A9.03 [Benincasa hispida] >XP_038905114.1 uncharacterized WD repeat-containing protein C2A9.03 [Benincasa hispida])

HSP 1 Score: 222.2 bits (565), Expect = 2.8e-54
Identity = 110/132 (83.33%), Postives = 120/132 (90.91%), Query Frame = 0


Query: 1   MSHHHGDATYYVVDDYEMEDIDDDMNDKNHDREVKGSDSDADEFNSSSRIVDTTAAQARR 60
           MSH+HGD T Y+ D+YEMEDIDDDM+D+ HDREV+GSDSDADE+NSSSRIVDTTAAQARR
Sbjct: 1   MSHYHGDDTDYMADEYEMEDIDDDMDDEYHDREVEGSDSDADEYNSSSRIVDTTAAQARR 60

Query: 61  GKDIQGIPWERLSVTREKYRKTRLEKYKNYENIPNSGEGLVKVCKATDKGCSYYEFHRNS 120
           G DIQGIPWERLS+TREKYRKTRLE+YKNYENIPNSGEG  K CK TDK CSYYEF RNS
Sbjct: 61  GIDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGEGSEKDCKVTDKACSYYEFCRNS 120

Query: 121 RSVKPTILHFQV 133
           RSVK TILHFQ+
Sbjct: 121 RSVKSTILHFQL 132

[Close]

BLAST of Spg005355 vs. NCBI nr
Match: XP_023540466.1 (uncharacterized WD repeat-containing protein C2A9.03-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 221.5 bits (563), Expect = 4.7e-54
Identity = 109/132 (82.58%), Postives = 121/132 (91.67%), Query Frame = 0


Query: 1   MSHHHGDATYYVVDDYEMEDIDDDMNDKNHDREVKGSDSDADEFNSSSRIVDTTAAQARR 60
           MSH+HGD T Y+ D+YEMEDIDDDM+D+ H RE++GSDSDADEFNSSS+IVDTTAAQARR
Sbjct: 1   MSHYHGDDTDYMADEYEMEDIDDDMDDEYHSREMEGSDSDADEFNSSSKIVDTTAAQARR 60

Query: 61  GKDIQGIPWERLSVTREKYRKTRLEKYKNYENIPNSGEGLVKVCKATDKGCSYYEFHRNS 120
           G DIQGIPWERLS+TREKYRKTRLE+YKNYENIPNSGEG  K CKAT+KGCSYYEF RNS
Sbjct: 61  GVDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGEGSEKDCKATEKGCSYYEFCRNS 120

Query: 121 RSVKPTILHFQV 133
           RSVK TILHFQ+
Sbjct: 121 RSVKSTILHFQL 132

[Close]

BLAST of Spg005355 vs. NCBI nr
Match: XP_022945249.1 (uncharacterized WD repeat-containing protein C2A9.03-like [Cucurbita moschata] >XP_022945257.1 uncharacterized WD repeat-containing protein C2A9.03-like [Cucurbita moschata])

HSP 1 Score: 221.1 bits (562), Expect = 6.2e-54
Identity = 109/132 (82.58%), Postives = 121/132 (91.67%), Query Frame = 0


Query: 1   MSHHHGDATYYVVDDYEMEDIDDDMNDKNHDREVKGSDSDADEFNSSSRIVDTTAAQARR 60
           MSH+HGD T Y+ D+YEMEDIDDDM+D+ H RE++GSDSDADEFNSSS+IVDTTAAQARR
Sbjct: 1   MSHYHGDDTDYMADEYEMEDIDDDMDDEYHGREMEGSDSDADEFNSSSKIVDTTAAQARR 60

Query: 61  GKDIQGIPWERLSVTREKYRKTRLEKYKNYENIPNSGEGLVKVCKATDKGCSYYEFHRNS 120
           G DIQGIPWERLS+TREKYRKTRLE+YKNYENIPNSGEG  K CKAT+KGCSYYEF RNS
Sbjct: 61  GVDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGEGSEKDCKATEKGCSYYEFCRNS 120

Query: 121 RSVKPTILHFQV 133
           RSVK TILHFQ+
Sbjct: 121 RSVKSTILHFQL 132

[Close]

BLAST of Spg005355 vs. NCBI nr
Match: KAG6596751.1 (hypothetical protein SDJN03_09931, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028288.1 SPBC2A9.03 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 218.0 bits (554), Expect = 5.2e-53
Identity = 108/132 (81.82%), Postives = 120/132 (90.91%), Query Frame = 0


Query: 1   MSHHHGDATYYVVDDYEMEDIDDDMNDKNHDREVKGSDSDADEFNSSSRIVDTTAAQARR 60
           MSH+HGD T Y+ D+YEMEDIDDDM+D+   RE++GSDSDADEFNSSS+IVDTTAAQARR
Sbjct: 1   MSHYHGDDTDYMADEYEMEDIDDDMDDEYRGREMEGSDSDADEFNSSSKIVDTTAAQARR 60

Query: 61  GKDIQGIPWERLSVTREKYRKTRLEKYKNYENIPNSGEGLVKVCKATDKGCSYYEFHRNS 120
           G DIQGIPWERLS+TREKYRKTRLE+YKNYENIPNSGEG  K CKAT+KGCSYYEF RNS
Sbjct: 61  GVDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGEGSEKDCKATEKGCSYYEFCRNS 120

Query: 121 RSVKPTILHFQV 133
           RSVK TILHFQ+
Sbjct: 121 RSVKSTILHFQL 132

[Close]

BLAST of Spg005355 vs. ExPASy TrEMBL
Match: A0A6J1DYJ2 (uncharacterized WD repeat-containing protein C2A9.03-like OS=Momordica charantia OX=3673 GN=LOC111025413 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 1.0e-54
Identity = 109/132 (82.58%), Postives = 121/132 (91.67%), Query Frame = 0


Query: 1   MSHHHGDATYYVVDDYEMEDIDDDMNDKNHDREVKGSDSDADEFNSSSRIVDTTAAQARR 60
           MSH+ GD T Y+ D+YEMEDIDDDM+D+ H+REV+GSDSDADEFNS+SRIVDTTAAQARR
Sbjct: 1   MSHYQGDDTDYMADEYEMEDIDDDMDDEYHEREVEGSDSDADEFNSNSRIVDTTAAQARR 60

Query: 61  GKDIQGIPWERLSVTREKYRKTRLEKYKNYENIPNSGEGLVKVCKATDKGCSYYEFHRNS 120
           GKDIQGIPWERLS+TREKYRKTRLE+YKNYENIPNSGEG  K CK T+KGCSYYEF RNS
Sbjct: 61  GKDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGEGSEKDCKVTEKGCSYYEFRRNS 120

Query: 121 RSVKPTILHFQV 133
           RSVK TILHFQ+
Sbjct: 121 RSVKSTILHFQL 132

[Close]

BLAST of Spg005355 vs. ExPASy TrEMBL
Match: A0A6J1G0G9 (uncharacterized WD repeat-containing protein C2A9.03-like OS=Cucurbita moschata OX=3662 GN=LOC111449547 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 3.0e-54
Identity = 109/132 (82.58%), Postives = 121/132 (91.67%), Query Frame = 0


Query: 1   MSHHHGDATYYVVDDYEMEDIDDDMNDKNHDREVKGSDSDADEFNSSSRIVDTTAAQARR 60
           MSH+HGD T Y+ D+YEMEDIDDDM+D+ H RE++GSDSDADEFNSSS+IVDTTAAQARR
Sbjct: 1   MSHYHGDDTDYMADEYEMEDIDDDMDDEYHGREMEGSDSDADEFNSSSKIVDTTAAQARR 60

Query: 61  GKDIQGIPWERLSVTREKYRKTRLEKYKNYENIPNSGEGLVKVCKATDKGCSYYEFHRNS 120
           G DIQGIPWERLS+TREKYRKTRLE+YKNYENIPNSGEG  K CKAT+KGCSYYEF RNS
Sbjct: 61  GVDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGEGSEKDCKATEKGCSYYEFCRNS 120

Query: 121 RSVKPTILHFQV 133
           RSVK TILHFQ+
Sbjct: 121 RSVKSTILHFQL 132

[Close]

BLAST of Spg005355 vs. ExPASy TrEMBL
Match: A0A5D3CQT6 (Putative WD repeat-containing protein C2A9.03 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00420 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 3.3e-53
Identity = 109/132 (82.58%), Postives = 118/132 (89.39%), Query Frame = 0


Query: 1   MSHHHGDATYYVVDDYEMEDIDDDMNDKNHDREVKGSDSDADEFNSSSRIVDTTAAQARR 60
           MSH+H D T Y+ D+YEMEDIDDDM+D+ HDRE +GSDSDADEFNSSSRIVDTTAAQARR
Sbjct: 1   MSHYHEDDTDYMADEYEMEDIDDDMDDECHDREEEGSDSDADEFNSSSRIVDTTAAQARR 60

Query: 61  GKDIQGIPWERLSVTREKYRKTRLEKYKNYENIPNSGEGLVKVCKATDKGCSYYEFHRNS 120
           G DIQGIPWERLS+TREKYRKTRLE+YKNYENIPNSGEG  K CK TDK CSYYEF RNS
Sbjct: 61  GIDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGEGSEKDCKVTDKACSYYEFCRNS 120

Query: 121 RSVKPTILHFQV 133
           RSVK TILHFQ+
Sbjct: 121 RSVKSTILHFQL 132

[Close]

BLAST of Spg005355 vs. ExPASy TrEMBL
Match: A0A1S3BM33 (uncharacterized WD repeat-containing protein C2A9.03 OS=Cucumis melo OX=3656 GN=LOC103491044 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 3.3e-53
Identity = 109/132 (82.58%), Postives = 118/132 (89.39%), Query Frame = 0


Query: 1   MSHHHGDATYYVVDDYEMEDIDDDMNDKNHDREVKGSDSDADEFNSSSRIVDTTAAQARR 60
           MSH+H D T Y+ D+YEMEDIDDDM+D+ HDRE +GSDSDADEFNSSSRIVDTTAAQARR
Sbjct: 1   MSHYHEDDTDYMADEYEMEDIDDDMDDECHDREEEGSDSDADEFNSSSRIVDTTAAQARR 60

Query: 61  GKDIQGIPWERLSVTREKYRKTRLEKYKNYENIPNSGEGLVKVCKATDKGCSYYEFHRNS 120
           G DIQGIPWERLS+TREKYRKTRLE+YKNYENIPNSGEG  K CK TDK CSYYEF RNS
Sbjct: 61  GIDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGEGSEKDCKVTDKACSYYEFCRNS 120

Query: 121 RSVKPTILHFQV 133
           RSVK TILHFQ+
Sbjct: 121 RSVKSTILHFQL 132

[Close]

BLAST of Spg005355 vs. ExPASy TrEMBL
Match: A0A0A0L2U6 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G055980 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 4.3e-53
Identity = 109/132 (82.58%), Postives = 118/132 (89.39%), Query Frame = 0


Query: 1   MSHHHGDATYYVVDDYEMEDIDDDMNDKNHDREVKGSDSDADEFNSSSRIVDTTAAQARR 60
           MSH+H D T Y+ D+YEMEDIDDDM+D+ HDRE +GSDSDADEFNSSSRIVDTTAAQARR
Sbjct: 1   MSHYHEDDTDYMADEYEMEDIDDDMDDECHDREDEGSDSDADEFNSSSRIVDTTAAQARR 60

Query: 61  GKDIQGIPWERLSVTREKYRKTRLEKYKNYENIPNSGEGLVKVCKATDKGCSYYEFHRNS 120
           G DIQGIPWERLS+TREKYRKTRLE+YKNYENIPNSGEG  K CK TDK CSYYEF RNS
Sbjct: 61  GIDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGEGSEKDCKVTDKACSYYEFCRNS 120

Query: 121 RSVKPTILHFQV 133
           RSVK TILHFQ+
Sbjct: 121 RSVKSTILHFQL 132

[Close]

BLAST of Spg005355 vs. TAIR 10
Match: AT3G13340.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 160.2 bits (404), Expect = 1.2e-39
Identity = 80/134 (59.70%), Postives = 108/134 (80.60%), Query Frame = 0


Query: 1   MSHHHGDATYYVVD-DYEMEDIDDDMNDKNHDREVKGSDSDADEFN-SSSRIVDTTAAQA 60
           MS++ GD   Y+ D D EMED++DDM+++    ++  SDSD +EF+ S++++ DTTA QA
Sbjct: 1   MSNYRGDDAEYMEDVDDEMEDVEDDMDEEFRGDDLGASDSDVEEFDYSNNKVADTTAEQA 60

Query: 61  RRGKDIQGIPWERLSVTREKYRKTRLEKYKNYENIPNSGEGLVKVCKATDKGCSYYEFHR 120
           R+GKDIQGIPW+RL+++REKYR+TRLE+YKNYEN+PNSGE   KVCK T KG  +Y+F R
Sbjct: 61  RKGKDIQGIPWDRLNISREKYRQTRLEQYKNYENVPNSGESSEKVCKVTQKGGLFYDFWR 120

Query: 121 NSRSVKPTILHFQV 133
           NSRS+K TILHFQ+
Sbjct: 121 NSRSIKSTILHFQL 134

[Close]

BLAST of Spg005355 vs. TAIR 10
Match: AT3G13340.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 160.2 bits (404), Expect = 1.2e-39
Identity = 80/134 (59.70%), Postives = 108/134 (80.60%), Query Frame = 0


Query: 1   MSHHHGDATYYVVD-DYEMEDIDDDMNDKNHDREVKGSDSDADEFN-SSSRIVDTTAAQA 60
           MS++ GD   Y+ D D EMED++DDM+++    ++  SDSD +EF+ S++++ DTTA QA
Sbjct: 1   MSNYRGDDAEYMEDVDDEMEDVEDDMDEEFRGDDLGASDSDVEEFDYSNNKVADTTAEQA 60

Query: 61  RRGKDIQGIPWERLSVTREKYRKTRLEKYKNYENIPNSGEGLVKVCKATDKGCSYYEFHR 120
           R+GKDIQGIPW+RL+++REKYR+TRLE+YKNYEN+PNSGE   KVCK T KG  +Y+F R
Sbjct: 61  RKGKDIQGIPWDRLNISREKYRQTRLEQYKNYENVPNSGESSEKVCKVTQKGGLFYDFWR 120

Query: 121 NSRSVKPTILHFQV 133
           NSRS+K TILHFQ+
Sbjct: 121 NSRSIKSTILHFQL 134

[Close]

BLAST of Spg005355 vs. TAIR 10
Match: AT5G56190.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 155.2 bits (391), Expect = 3.9e-38
Identity = 76/134 (56.72%), Postives = 103/134 (76.87%), Query Frame = 0


Query: 1   MSHHHGD--ATYYVVDDYEMEDIDDDMNDKNHDREVKGSDSDADEFNSSSRIVDTTAAQA 60
           MS ++GD     Y+ D+Y+M+D++DDMN     R++  SDS+ ++F+  ++  DT+AAQA
Sbjct: 1   MSDYNGDDLEDEYMADEYDMDDLEDDMNAAFDGRDIDASDSEVEDFDQLNKAADTSAAQA 60

Query: 61  RRGKDIQGIPWERLSVTREKYRKTRLEKYKNYENIPNSGEGLVKVCKATDKGCSYYEFHR 120
           R GKDIQGIPW+ L++TR+ YRKTRLE+YKNYENIPNSG+   K C  T+KG S+YEF R
Sbjct: 61  RNGKDIQGIPWDSLTLTRKDYRKTRLEQYKNYENIPNSGDESAKKCMNTEKGSSFYEFRR 120

Query: 121 NSRSVKPTILHFQV 133
           NSRSV+ TILHFQ+
Sbjct: 121 NSRSVRSTILHFQL 134

[Close]

BLAST of Spg005355 vs. TAIR 10
Match: AT5G56190.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 154.1 bits (388), Expect = 8.6e-38
Identity = 73/126 (57.94%), Postives = 98/126 (77.78%), Query Frame = 0


Query: 7   DATYYVVDDYEMEDIDDDMNDKNHDREVKGSDSDADEFNSSSRIVDTTAAQARRGKDIQG 66
           D   Y+ D+Y+M+D++DDMN     R++  SDS+ ++F+  ++  DT+AAQAR GKDIQG
Sbjct: 3   DFDEYMADEYDMDDLEDDMNAAFDGRDIDASDSEVEDFDQLNKAADTSAAQARNGKDIQG 62

Query: 67  IPWERLSVTREKYRKTRLEKYKNYENIPNSGEGLVKVCKATDKGCSYYEFHRNSRSVKPT 126
           IPW+ L++TR+ YRKTRLE+YKNYENIPNSG+   K C  T+KG S+YEF RNSRSV+ T
Sbjct: 63  IPWDSLTLTRKDYRKTRLEQYKNYENIPNSGDESAKKCMNTEKGSSFYEFRRNSRSVRST 122

Query: 127 ILHFQV 133
           ILHFQ+
Sbjct: 123 ILHFQL 128

[Close]

BLAST of Spg005355 vs. TAIR 10
Match: AT1G55680.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 149.1 bits (375), Expect = 2.8e-36
Identity = 78/138 (56.52%), Postives = 104/138 (75.36%), Query Frame = 0


Query: 1   MSHHHGDATYYVVDDYEMEDIDDDMNDKNHDREVKG-----SDSDADEFN-SSSRIVDTT 60
           MS++ GD   Y      MED+DD+M++ + D + +G     SDSD DEF+ S+++I DT+
Sbjct: 1   MSNYQGDDAEY------MEDVDDEMDEDDLDEDFRGDDMAASDSDVDEFDYSNNKIADTS 60

Query: 61  AAQARRGKDIQGIPWERLSVTREKYRKTRLEKYKNYENIPNSGEGLVKVCKATDKGCSYY 120
           A QAR+GKDIQGIPW+RLS+TRE YR+TRLE+YKNYEN+PNSGE   K C AT KG  +Y
Sbjct: 61  ADQARKGKDIQGIPWDRLSITRETYRQTRLEQYKNYENVPNSGESSGKDCMATQKGALFY 120

Query: 121 EFHRNSRSVKPTILHFQV 133
           +F RN+RS+K +ILHFQ+
Sbjct: 121 DFWRNTRSIKSSILHFQL 132

The following BLAST results are available for this feature:

BLAST of Spg005355 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158966.1	2.1e-54	82.58	uncharacterized WD repeat-containing protein C2A9.03-like [Momordica charantia] ...	[more]
XP_038905113.1	2.8e-54	83.33	uncharacterized WD repeat-containing protein C2A9.03 [Benincasa hispida] >XP_038...	[more]
XP_023540466.1	4.7e-54	82.58	uncharacterized WD repeat-containing protein C2A9.03-like [Cucurbita pepo subsp....	[more]
XP_022945249.1	6.2e-54	82.58	uncharacterized WD repeat-containing protein C2A9.03-like [Cucurbita moschata] >...	[more]
KAG6596751.1	5.2e-53	81.82	hypothetical protein SDJN03_09931, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Spg005355 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg005355 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DYJ2	1.0e-54	82.58	uncharacterized WD repeat-containing protein C2A9.03-like OS=Momordica charantia...	[more]
A0A6J1G0G9	3.0e-54	82.58	uncharacterized WD repeat-containing protein C2A9.03-like OS=Cucurbita moschata ...	[more]
A0A5D3CQT6	3.3e-53	82.58	Putative WD repeat-containing protein C2A9.03 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A1S3BM33	3.3e-53	82.58	uncharacterized WD repeat-containing protein C2A9.03 OS=Cucumis melo OX=3656 GN=...	[more]
A0A0A0L2U6	4.3e-53	82.58	WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G...	[more]

BLAST of Spg005355 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G13340.1	1.2e-39	59.70	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G13340.2	1.2e-39	59.70	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G56190.2	3.9e-38	56.72	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G56190.1	8.6e-38	57.94	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G55680.1	2.8e-36	56.52	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..49
None	No IPR available	PANTHER	PTHR43991	WD REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_8G05640)-RELATED	coord: 1..133
None	No IPR available	PANTHER	PTHR43991:SF34	TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 1..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg005355.1	Spg005355.1	mRNA