
Spg005094 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAACAGTTTGCGAAAACCCTCGCAACTATGCCCCTGCGTTAGTCCACGACTTCTATCGGGCGTAGTGGCAAGAAGTCGACGAAGTTTTAAGGAGAGGCCACGTAGTTGCATTCTCCTCCGCATGCATCAACAATGTGTACGAACTGCGCGACATCCCAAACGCAGAAGGGAATGCACTCCTCAACTGCCTCGATGATGACTTCCTGAGCGCAGTACTTCTTGCGGTGGCTCGACCTGGAGCCAAATGGGACGGCCACGGCCCTACGAGGACCCTGAAATCGCAGCTGCTCGACTTTGAAGCCTCCTACTGGATGCATTGGGTGAAGAATCGCATCATGCCCACAACGCATGATGCCACATTGAGCCTTCAACGGTTAATTCTTGTTTATTGCATCATGAAGGGAACCCCAATTGACTTGGGCCAGATCCTCGTCGAAACAGTGAGCCAGACTACCACAAAACCTAAAGGCGCAATGTTTTGCCCAGGCCTTGTCACCCGTTTATGCCGTGCATCAAGCCTCGTGCCCGTAGCAGATGAAGAAATCCGACCCATGCGGAAGGATTTTGACGACCAATGGTGGGCGCGCGTAACCAGCACCCGCGATAGGCGTTTGCAAGGAAGCACGCAGCAATGAGCTACCGCATCCCAACCCACCGAACCTACAGCTCTTGCACCTGAGAAGCCAAAGAAAAAGAGGCGCAAGCAAACTGCGGGCAGAAACCCACCACCAGCCGCACGGATCCCTCAATCTATTCCACCAGCGCAGGAAAGCACTGTCTGCGCCCAACCTCAGGGACCCGTGCCACCACCGCAAGAAAGCTTGCCACCGCCACCACCACCGCCACTGCCACCACCAATTGTCCAGAACACACCTCCTCCGCAGCACAACGACGACTTGCGATCAGAGGAGATTTTTGAAGAATCATTGTCGAGCCTCACTCGCAATGACGAAGTTCCTGCGTCGAGCCCCACACCGCAAGCCACAGATTCTGAGAGCCCAAATCAGGCTGCGGCTGATCTACTGATTGATGTGGATTCAGCCCTTATCTTTTCAGAGTTGCGGCAAATAATTCAAGAAATTGTAGAGCCCCTGCGCCAGCAGCAAGAACGGATGTGCCAGCAACAAGAATTGCTGCGCAAGCAACAAGAAGAACTGTCGCAGCGAGTAAATGCCTTAGTCCTTTTTCTAATGCGATGGACTGAAGGTTTTGGTCGTTTGCCAGTCACGCCAAACTTGTTCGCACGACCAGCTGCTCAACAAAGACCCCCTGGCACAGGCCCATCACAAGTGCGCGAATCCATGCCTCCACCTGCGCCGAGGAACCCAAGACCACCTCCACCACCACTGCTGCAGGAGTAG ATGGGAAACAGTTTGCGAAAACCCTCGCAACTATGCCCCTGCGTTAGTCCACGACTTCTATCGGGCGTAGTGGCAAGAAAAGGGAATGCACTCCTCAACTGCCTCGATGATGACTTCCTGAGCGCAGTACTTCTTGCGGTGGCTCGACCTGGAGCCAAATGGGACGGCCACGGCCCTACGAGGACCCTGAAATCGCAGCTGCTCGACTTTGAAGCCTCCTACTGGATGCATTGGGTGAAGAATCGCATCATGCCCACAACGCATGATGCCACATTGAGCCTTCAACGGTTAATTCTTGTTTATTGCATCATGAAGGGAACCCCAATTGACTTGGGCCAGATCCTCGTCGAAACAGTGAGCCAGACTACCACAAAACCTAAAGGCGCAATGTTTTGCCCAGGCCTTGTCACCCGTTTATGCCGTGCATCAAGCCTCGTGCCCGTAGCAGATGAAGAAATCCGACCCATGCGGAAGGATTTTGACGACCAATGGTGGGCGCGCGTAACCAGCACCCGCGATAGGCCTCTTGCACCTGAGAAGCCAAAGAAAAAGAGGCGCAAGCAAACTGCGGGCAGAAACCCACCACCAGCCGCACGGATCCCTCAATCTATTCCACCAGCGCAGGAAAGCACTGTCTGCGCCCAACCTCAGGGACCCGTGCCACCACCGCAAGAAAGCTTGCCACCGCCACCACCACCGCCACTGCCACCACCAATTGTCCAGAACACACCTCCTCCGCAGCACAACGACGACTTGCGATCAGAGGAGATTTTTGAAGAATCATTGTCGAGCCTCACTCGCAATGACGAAGTTCCTGCGTCGAGCCCCACACCGCAAGCCACAGATTCTGAGAGCCCAAATCAGGCTGCGGCTGATCTACTGATTGATGTGGATTCAGCCCTTATCTTTTCAGAGTTGCGGCAAATAATTCAAGAAATTGTAGAGCCCCTGCGCCAGCAGCAAGAACGGATGTGCCAGCAACAAGAATTGCTGCGCAAGCAACAAGAAGAACTGTCGCAGCGAGTAAATGCCTTAGTCCTTTTTCTAATGCGATGGACTGAAGGTTTTGGTCGTTTGCCAGTCACGCCAAACTTGTTCGCACGACCAGCTGCTCAACAAAGACCCCCTGGCACAGGCCCATCACAAGTGCGCGAATCCATGCCTCCACCTGCGCCGAGGAACCCAAGACCACCTCCACCACCACTGCTGCAGGAGTAG ATGGGAAACAGTTTGCGAAAACCCTCGCAACTATGCCCCTGCGTTAGTCCACGACTTCTATCGGGCGTAGTGGCAAGAAAAGGGAATGCACTCCTCAACTGCCTCGATGATGACTTCCTGAGCGCAGTACTTCTTGCGGTGGCTCGACCTGGAGCCAAATGGGACGGCCACGGCCCTACGAGGACCCTGAAATCGCAGCTGCTCGACTTTGAAGCCTCCTACTGGATGCATTGGGTGAAGAATCGCATCATGCCCACAACGCATGATGCCACATTGAGCCTTCAACGGTTAATTCTTGTTTATTGCATCATGAAGGGAACCCCAATTGACTTGGGCCAGATCCTCGTCGAAACAGTGAGCCAGACTACCACAAAACCTAAAGGCGCAATGTTTTGCCCAGGCCTTGTCACCCGTTTATGCCGTGCATCAAGCCTCGTGCCCGTAGCAGATGAAGAAATCCGACCCATGCGGAAGGATTTTGACGACCAATGGTGGGCGCGCGTAACCAGCACCCGCGATAGGCCTCTTGCACCTGAGAAGCCAAAGAAAAAGAGGCGCAAGCAAACTGCGGGCAGAAACCCACCACCAGCCGCACGGATCCCTCAATCTATTCCACCAGCGCAGGAAAGCACTGTCTGCGCCCAACCTCAGGGACCCGTGCCACCACCGCAAGAAAGCTTGCCACCGCCACCACCACCGCCACTGCCACCACCAATTGTCCAGAACACACCTCCTCCGCAGCACAACGACGACTTGCGATCAGAGGAGATTTTTGAAGAATCATTGTCGAGCCTCACTCGCAATGACGAAGTTCCTGCGTCGAGCCCCACACCGCAAGCCACAGATTCTGAGAGCCCAAATCAGGCTGCGGCTGATCTACTGATTGATGTGGATTCAGCCCTTATCTTTTCAGAGTTGCGGCAAATAATTCAAGAAATTGTAGAGCCCCTGCGCCAGCAGCAAGAACGGATGTGCCAGCAACAAGAATTGCTGCGCAAGCAACAAGAAGAACTGTCGCAGCGAGTAAATGCCTTAGTCCTTTTTCTAATGCGATGGACTGAAGGTTTTGGTCGTTTGCCAGTCACGCCAAACTTGTTCGCACGACCAGCTGCTCAACAAAGACCCCCTGGCACAGGCCCATCACAAGTGCGCGAATCCATGCCTCCACCTGCGCCGAGGAACCCAAGACCACCTCCACCACCACTGCTGCAGGAGTAG MGNSLRKPSQLCPCVSPRLLSGVVARKGNALLNCLDDDFLSAVLLAVARPGAKWDGHGPTRTLKSQLLDFEASYWMHWVKNRIMPTTHDATLSLQRLILVYCIMKGTPIDLGQILVETVSQTTTKPKGAMFCPGLVTRLCRASSLVPVADEEIRPMRKDFDDQWWARVTSTRDRPLAPEKPKKKRRKQTAGRNPPPAARIPQSIPPAQESTVCAQPQGPVPPPQESLPPPPPPPLPPPIVQNTPPPQHNDDLRSEEIFEESLSSLTRNDEVPASSPTPQATDSESPNQAAADLLIDVDSALIFSELRQIIQEIVEPLRQQQERMCQQQELLRKQQEELSQRVNALVLFLMRWTEGFGRLPVTPNLFARPAAQQRPPGTGPSQVRESMPPPAPRNPRPPPPPLLQE Homology
BLAST of Spg005094 vs. NCBI nr
Match: MCH80834.1 (hypothetical protein [Trifolium medium]) HSP 1 Score: 85.1 bits (209), Expect = 1.5e-12 Identity = 40/132 (30.30%), Postives = 76/132 (57.58%), Query Frame = 0
BLAST of Spg005094 vs. NCBI nr
Match: KAE8676815.1 (hypothetical protein F3Y22_tig00111582pilonHSYRG01273 [Hibiscus syriacus]) HSP 1 Score: 83.6 bits (205), Expect = 4.4e-12 Identity = 39/104 (37.50%), Postives = 65/104 (62.50%), Query Frame = 0
BLAST of Spg005094 vs. NCBI nr
Match: XP_024995361.1 (formin-like protein 3 [Cynara cardunculus var. scolymus]) HSP 1 Score: 82.8 bits (203), Expect = 7.5e-12 Identity = 38/130 (29.23%), Postives = 73/130 (56.15%), Query Frame = 0
BLAST of Spg005094 vs. NCBI nr
Match: KAE8680640.1 (hypothetical protein F3Y22_tig00111372pilonHSYRG00020 [Hibiscus syriacus]) HSP 1 Score: 81.3 bits (199), Expect = 2.2e-11 Identity = 40/121 (33.06%), Postives = 70/121 (57.85%), Query Frame = 0
BLAST of Spg005094 vs. NCBI nr
Match: KAE8657620.1 (Detected protein of unknown function [Hibiscus syriacus]) HSP 1 Score: 81.3 bits (199), Expect = 2.2e-11 Identity = 40/121 (33.06%), Postives = 68/121 (56.20%), Query Frame = 0
BLAST of Spg005094 vs. ExPASy TrEMBL
Match: A0A392M2J7 (Uncharacterized protein (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_0001608 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 7.3e-13 Identity = 40/132 (30.30%), Postives = 76/132 (57.58%), Query Frame = 0
BLAST of Spg005094 vs. ExPASy TrEMBL
Match: A0A6A2Y697 (Reverse transcriptase domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111582pilonHSYRG01273 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 2.1e-12 Identity = 39/104 (37.50%), Postives = 65/104 (62.50%), Query Frame = 0
BLAST of Spg005094 vs. ExPASy TrEMBL
Match: A0A6A2WSK8 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00116989pilonHSYRG00795 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 1.1e-11 Identity = 40/121 (33.06%), Postives = 68/121 (56.20%), Query Frame = 0
BLAST of Spg005094 vs. ExPASy TrEMBL
Match: A0A6A2YMQ9 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111372pilonHSYRG00020 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 1.1e-11 Identity = 40/121 (33.06%), Postives = 70/121 (57.85%), Query Frame = 0
BLAST of Spg005094 vs. ExPASy TrEMBL
Match: A0A2P5CPE8 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_135680 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 2.3e-11 Identity = 41/115 (35.65%), Postives = 69/115 (60.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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