Spg004848 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg004848
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	somatic embryogenesis receptor kinase 2
Location	scaffold9: 20751177 .. 20753216 (-)
RNA-Seq Expression	Spg004848
Synteny	Spg004848

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CACAACTTTTGGATGAATAGTAAGTTCGAATCTTCCTTTTTCTCATTTACAATATAATATCGTGTTTGAAAAAAAAGAAAAAAAATAATAATAAAAAAATAACAAGGAGCAAATGTCTTGGTTGCAGCTTGTCACGTCACTTTCCACGATGTAGCGCGAAGGCGTTTTTGACTGCGTTTGGTCAGCTCGGTCAGCATCGTTCGGGCAGCTCCCCACCCTCACAAAAATACGTTTGTACTCATTTCTCTCTTTCTTTCTTCCAATCCCTTTCTCTTTCTGCTCCCATTCCTCAAAAGGAGAGAGAGAGATAGAGAGAAAAAAAAAACACTAATCCCACACCAAGCACTTTCACAGAGAGAGAGAGAAGGAAGAGAGCGGAAAAGGGAAAGTAAGCTTAGAGAAAAGCTATGCCCGTGAAAGAAAAAAAAAATGACTGAAATATTCTGATTTTTCTCTTCTGGGTTTCGCCTTTTTGAGCTCGCTAGATCGGCTGTGCGTGCTGCTGATTCTTCACGATTGTGTCTTCTGCCTCAAATGTTGGAGTTTTTGGTGGATTTTTGAACTGGGTTTCTGAGTTCTCGAGTGTGTGGTGTTTTTTTTTTTGGGGTTTAGGTTTTGGCTTTGGTTTTGGTTTTGTTCCCAAGTGGGGTTCTGGAGGTTTTGTGATGATTGTGTTTGTTGGTGTGGTTTTCCATTTGGATCTGATGTTCATGATCACTTAATGGAGATGGAGCAGTTCAAGGTTTTGGCTCTGGGTTTCGTCTGTTTGATCTTGCTGGTTCGTCCACTATGGCTCGTTTCTGCTAACATGGAAGGTTTGTGTGTTTTCTGTTTTACCATTAATTGCTCTTCTGTTGCTTTCTCGTTTGATTCCCCTTTATCAGGAACCTGCTGAATTTAATCTTTTTGTCTAAAATGACTTCTGAATATGGAAATGCCTTTATTCTTCTTTGCCCCTCTTTTTGTTTCTTGTGTATGTGGATGGTTGGAATTTATTTGTAATTTTACAAGATTGTTTTTGGAGATAAAATAATTCACTTTTTTTTGGGTTTTTTTTTTTTTTTTTTTTTGGAATTTTTGTCTCTTCATTGGGTTGGCTTGTAAGATTGGGATGGTGTTGGAACAACTAATGACTGATTCTAAATGGGGAAAGGAAAAGAGTTTATGCTCTTTGTCTCAATTTTTACAAATTAGTTTAGGGGAAAGCATCTACGAGTAGATTTTGTTGGAGATTAGTGCTCTGGACTGAACTTTGCAATCAAAGTCTTCATTTTCTGCATGATAATTTGAGCTTAGAAAGAGAGCTGGGGTAACTTCAGTTATATGCTTAGATCAGTTGTAGAAGTGCAAACGCCTTTTAATGGAGCTCACCAGCGAGCGAATAAATTTTTTTCTTTCCTTAACCTAGTCTTCCATTCCTTGTCGTAAATGACCAATGAACAGATGGTTAATTGCTGCGTGTTTCTTCCATCCTCATTTCTAATTTCCAAAGATTCATTTATAAATCTTGAACTATGGATTATGGAACAATTTTTTTTTTCTGTAGCACTAAATCGTAAATCTAATTGTTTTCTGTTTTGACTTGATGGCCTTTGTGACAGTTGAGACGTTCTTGGTGTTTTCAAAACTCTTCACACTGTCCCTTGGAGCTTTTTTTCTTTGTGCTGACATATCATTCGTACCCTTTTGTAATTAAGTTTACTTTATTTGTGAACAGGTGATGCTTTGCATAGCCTAAGAACCAGCTTGCAGGATCCTAACAATGTTTTGCAGAGTTGGGATCCCACTCTTGTCAATCCCTGTACATGGTTTCACGTTACATGCAATAATGATAATAGTGTCATAAGAGTGTAAGCTATCTGCCATACATGTCTATTGTCTCTCCAAGAGATGCTTATGATAAGTCGTTGTGATTAACAGCTCTGAAAATGATTTAGATACTGTTTTATGTGTTTGTTTTTCAGCGATCTTGGAAATGCAGCTTTGTCAGGCACACTTGTTCCACAGCTTGGCTTGCTAAAAAATTTGCAGTATTTGTAA

mRNA sequence

ATGGAGATGGAGCAGTTCAAGGTTTTGGCTCTGGGTTTCGTCTGTTTGATCTTGCTGGTTCGTCCACTATGGCTCGTTTCTGCTAACATGGAAGGTGATGCTTTGCATAGCCTAAGAACCAGCTTGCAGGATCCTAACAATGTTTTGCAGAGTTGGGATCCCACTCTTGTCAATCCCTGTACATGGTTTCACGTTACATGCAATAATGATAATAGTGTCATAAGAGTCGATCTTGGAAATGCAGCTTTGTCAGGCACACTTGTTCCACAGCTTGGCTTGCTAAAAAATTTGCAGTATTTGTAA

Coding sequence (CDS)

ATGGAGATGGAGCAGTTCAAGGTTTTGGCTCTGGGTTTCGTCTGTTTGATCTTGCTGGTTCGTCCACTATGGCTCGTTTCTGCTAACATGGAAGGTGATGCTTTGCATAGCCTAAGAACCAGCTTGCAGGATCCTAACAATGTTTTGCAGAGTTGGGATCCCACTCTTGTCAATCCCTGTACATGGTTTCACGTTACATGCAATAATGATAATAGTGTCATAAGAGTCGATCTTGGAAATGCAGCTTTGTCAGGCACACTTGTTCCACAGCTTGGCTTGCTAAAAAATTTGCAGTATTTGTAA

Protein sequence

MEMEQFKVLALGFVCLILLVRPLWLVSANMEGDALHSLRTSLQDPNNVLQSWDPTLVNPCTWFHVTCNNDNSVIRVDLGNAALSGTLVPQLGLLKNLQYL

Homology

[Close]

BLAST of Spg004848 vs. NCBI nr
Match: XP_004138361.1 (somatic embryogenesis receptor kinase 2 [Cucumis sativus] >KGN45898.1 hypothetical protein Csa_005074 [Cucumis sativus])

HSP 1 Score: 201.8 bits (512), Expect = 2.7e-48
Identity = 98/100 (98.00%), Postives = 99/100 (99.00%), Query Frame = 0


Query: 1   MEMEQFKVLALGFVCLILLVRPLWLVSANMEGDALHSLRTSLQDPNNVLQSWDPTLVNPC 60
           MEMEQ+KVLALGFV LILLVRPLWLVSANMEGDALHSLRTSLQDPNNVLQSWDPTLVNPC
Sbjct: 1   MEMEQYKVLALGFVSLILLVRPLWLVSANMEGDALHSLRTSLQDPNNVLQSWDPTLVNPC 60

Query: 61  TWFHVTCNNDNSVIRVDLGNAALSGTLVPQLGLLKNLQYL 101
           TWFHVTCNNDNSVIRVDLGNAALSGTLVPQLGLLKNLQYL
Sbjct: 61  TWFHVTCNNDNSVIRVDLGNAALSGTLVPQLGLLKNLQYL 100

[Close]

BLAST of Spg004848 vs. NCBI nr
Match: XP_022155852.1 (somatic embryogenesis receptor kinase 2 [Momordica charantia])

HSP 1 Score: 201.4 bits (511), Expect = 3.6e-48
Identity = 97/100 (97.00%), Postives = 98/100 (98.00%), Query Frame = 0


Query: 1   MEMEQFKVLALGFVCLILLVRPLWLVSANMEGDALHSLRTSLQDPNNVLQSWDPTLVNPC 60
           MEMEQ+KVLALGFVCLI LV PLWLVSANMEGDALHSLRTSLQDPNNVLQSWDPTLVNPC
Sbjct: 1   MEMEQYKVLALGFVCLIFLVPPLWLVSANMEGDALHSLRTSLQDPNNVLQSWDPTLVNPC 60

Query: 61  TWFHVTCNNDNSVIRVDLGNAALSGTLVPQLGLLKNLQYL 101
           TWFHVTCNNDNSVIRVDLGNAALSGTLVPQLGLLKNLQYL
Sbjct: 61  TWFHVTCNNDNSVIRVDLGNAALSGTLVPQLGLLKNLQYL 100

[Close]

BLAST of Spg004848 vs. NCBI nr
Match: XP_038884639.1 (somatic embryogenesis receptor kinase 2 [Benincasa hispida])

HSP 1 Score: 200.7 bits (509), Expect = 6.1e-48
Identity = 97/100 (97.00%), Postives = 99/100 (99.00%), Query Frame = 0


Query: 1   MEMEQFKVLALGFVCLILLVRPLWLVSANMEGDALHSLRTSLQDPNNVLQSWDPTLVNPC 60
           MEMEQ+KVLALGFV LILL+RPLWLVSANMEGDALHSLRTSLQDPNNVLQSWDPTLVNPC
Sbjct: 1   MEMEQYKVLALGFVSLILLLRPLWLVSANMEGDALHSLRTSLQDPNNVLQSWDPTLVNPC 60

Query: 61  TWFHVTCNNDNSVIRVDLGNAALSGTLVPQLGLLKNLQYL 101
           TWFHVTCNNDNSVIRVDLGNAALSGTLVPQLGLLKNLQYL
Sbjct: 61  TWFHVTCNNDNSVIRVDLGNAALSGTLVPQLGLLKNLQYL 100

[Close]

BLAST of Spg004848 vs. NCBI nr
Match: XP_008464349.1 (PREDICTED: somatic embryogenesis receptor kinase 2 isoform X1 [Cucumis melo] >TYK18459.1 somatic embryogenesis receptor kinase 2 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 199.1 bits (505), Expect = 1.8e-47
Identity = 97/100 (97.00%), Postives = 98/100 (98.00%), Query Frame = 0


Query: 1   MEMEQFKVLALGFVCLILLVRPLWLVSANMEGDALHSLRTSLQDPNNVLQSWDPTLVNPC 60
           MEME +KVLALGFV LILLVRPLWLVSANMEGDALHSLRTSLQDPNNVLQSWDPTLVNPC
Sbjct: 1   MEMELYKVLALGFVSLILLVRPLWLVSANMEGDALHSLRTSLQDPNNVLQSWDPTLVNPC 60

Query: 61  TWFHVTCNNDNSVIRVDLGNAALSGTLVPQLGLLKNLQYL 101
           TWFHVTCNNDNSVIRVDLGNAALSGTLVPQLGLLKNLQYL
Sbjct: 61  TWFHVTCNNDNSVIRVDLGNAALSGTLVPQLGLLKNLQYL 100

[Close]

BLAST of Spg004848 vs. NCBI nr
Match: XP_008464350.1 (PREDICTED: somatic embryogenesis receptor kinase 2 isoform X2 [Cucumis melo])

HSP 1 Score: 199.1 bits (505), Expect = 1.8e-47
Identity = 97/100 (97.00%), Postives = 98/100 (98.00%), Query Frame = 0


Query: 1   MEMEQFKVLALGFVCLILLVRPLWLVSANMEGDALHSLRTSLQDPNNVLQSWDPTLVNPC 60
           MEME +KVLALGFV LILLVRPLWLVSANMEGDALHSLRTSLQDPNNVLQSWDPTLVNPC
Sbjct: 1   MEMELYKVLALGFVSLILLVRPLWLVSANMEGDALHSLRTSLQDPNNVLQSWDPTLVNPC 60

Query: 61  TWFHVTCNNDNSVIRVDLGNAALSGTLVPQLGLLKNLQYL 101
           TWFHVTCNNDNSVIRVDLGNAALSGTLVPQLGLLKNLQYL
Sbjct: 61  TWFHVTCNNDNSVIRVDLGNAALSGTLVPQLGLLKNLQYL 100

[Close]

BLAST of Spg004848 vs. ExPASy Swiss-Prot
Match: Q9XIC7 (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=SERK2 PE=1 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 1.6e-38
Identity = 80/101 (79.21%), Postives = 84/101 (83.17%), Query Frame = 0


Query: 3   MEQFKVLALGFVCLI---LLVRPLWLVSANMEGDALHSLRTSLQDPNNVLQSWDPTLVNP 62
           M + K  A GFVCLI   LL   LWL S+NMEGDALHSLR +L DPNNVLQSWDPTLVNP
Sbjct: 1   MGRKKFEAFGFVCLISLLLLFNSLWLASSNMEGDALHSLRANLVDPNNVLQSWDPTLVNP 60

Query: 63  CTWFHVTCNNDNSVIRVDLGNAALSGTLVPQLGLLKNLQYL 101
           CTWFHVTCNN+NSVIRVDLGNA LSG LVPQLG LKNLQYL
Sbjct: 61  CTWFHVTCNNENSVIRVDLGNADLSGQLVPQLGQLKNLQYL 101

[Close]

BLAST of Spg004848 vs. ExPASy Swiss-Prot
Match: B8BB68 (LRR receptor kinase BAK1 OS=Oryza sativa subsp. indica OX=39946 GN=BAK1 PE=2 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.1e-36
Identity = 76/91 (83.52%), Postives = 80/91 (87.91%), Query Frame = 0


Query: 10  ALGFVCLILLVRPLWLVSANMEGDALHSLRTSLQDPNNVLQSWDPTLVNPCTWFHVTCNN 69
           A+  V L+ L+ P   V ANMEGDALHSLRT+L DPNNVLQSWDPTLVNPCTWFHVTCNN
Sbjct: 7   AVWAVLLLRLLVPAARVLANMEGDALHSLRTNLVDPNNVLQSWDPTLVNPCTWFHVTCNN 66

Query: 70  DNSVIRVDLGNAALSGTLVPQLGLLKNLQYL 101
           DNSVIRVDLGNAALSGTLVPQLG LKNLQYL
Sbjct: 67  DNSVIRVDLGNAALSGTLVPQLGQLKNLQYL 97

[Close]

BLAST of Spg004848 vs. ExPASy Swiss-Prot
Match: Q6Z4U4 (LRR receptor kinase BAK1 OS=Oryza sativa subsp. japonica OX=39947 GN=BAK1 PE=1 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.1e-36
Identity = 76/91 (83.52%), Postives = 80/91 (87.91%), Query Frame = 0


Query: 10  ALGFVCLILLVRPLWLVSANMEGDALHSLRTSLQDPNNVLQSWDPTLVNPCTWFHVTCNN 69
           A+  V L+ L+ P   V ANMEGDALHSLRT+L DPNNVLQSWDPTLVNPCTWFHVTCNN
Sbjct: 7   AVWAVLLLRLLVPAARVLANMEGDALHSLRTNLVDPNNVLQSWDPTLVNPCTWFHVTCNN 66

Query: 70  DNSVIRVDLGNAALSGTLVPQLGLLKNLQYL 101
           DNSVIRVDLGNAALSGTLVPQLG LKNLQYL
Sbjct: 67  DNSVIRVDLGNAALSGTLVPQLGQLKNLQYL 97

[Close]

BLAST of Spg004848 vs. ExPASy Swiss-Prot
Match: Q94AG2 (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=SERK1 PE=1 SV=2)

HSP 1 Score: 150.2 bits (378), Expect = 1.2e-35
Identity = 71/91 (78.02%), Postives = 80/91 (87.91%), Query Frame = 0


Query: 13  FVCLILLVRP---LWLVSANMEGDALHSLRTSLQDPNNVLQSWDPTLVNPCTWFHVTCNN 72
           F+ L L++ P   LWL SAN+EGDALH+LR +L DPNNVLQSWDPTLVNPCTWFHVTCNN
Sbjct: 8   FILLSLILLPNHSLWLASANLEGDALHTLRVTLVDPNNVLQSWDPTLVNPCTWFHVTCNN 67

Query: 73  DNSVIRVDLGNAALSGTLVPQLGLLKNLQYL 101
           +NSVIRVDLGNA LSG LVP+LG+LKNLQYL
Sbjct: 68  ENSVIRVDLGNAELSGHLVPELGVLKNLQYL 98

[Close]

BLAST of Spg004848 vs. ExPASy Swiss-Prot
Match: Q7XV05 (LRR receptor kinase SERK2 OS=Oryza sativa subsp. japonica OX=39947 GN=SERK2 PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 3.1e-31
Identity = 69/92 (75.00%), Postives = 76/92 (82.61%), Query Frame = 0


Query: 9   LALGFVCLILLVRPLWLVSANMEGDALHSLRTSLQDPNNVLQSWDPTLVNPCTWFHVTCN 68
           LA+ FV ++ +   +  V AN EGDAL+SLR SL+D NNVLQSWDPTLVNPCTWFHVTCN
Sbjct: 14  LAVPFVWVVAVA--VSRVGANTEGDALYSLRQSLKDANNVLQSWDPTLVNPCTWFHVTCN 73

Query: 69  NDNSVIRVDLGNAALSGTLVPQLGLLKNLQYL 101
            DNSVIRVDLGNA LSG LVPQLG LKNLQYL
Sbjct: 74  PDNSVIRVDLGNAQLSGALVPQLGQLKNLQYL 103

[Close]

BLAST of Spg004848 vs. ExPASy TrEMBL
Match: A0A0A0K8Y9 (Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G020120 PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.3e-48
Identity = 98/100 (98.00%), Postives = 99/100 (99.00%), Query Frame = 0


Query: 1   MEMEQFKVLALGFVCLILLVRPLWLVSANMEGDALHSLRTSLQDPNNVLQSWDPTLVNPC 60
           MEMEQ+KVLALGFV LILLVRPLWLVSANMEGDALHSLRTSLQDPNNVLQSWDPTLVNPC
Sbjct: 1   MEMEQYKVLALGFVSLILLVRPLWLVSANMEGDALHSLRTSLQDPNNVLQSWDPTLVNPC 60

Query: 61  TWFHVTCNNDNSVIRVDLGNAALSGTLVPQLGLLKNLQYL 101
           TWFHVTCNNDNSVIRVDLGNAALSGTLVPQLGLLKNLQYL
Sbjct: 61  TWFHVTCNNDNSVIRVDLGNAALSGTLVPQLGLLKNLQYL 100

[Close]

BLAST of Spg004848 vs. ExPASy TrEMBL
Match: A0A6J1DQH8 (somatic embryogenesis receptor kinase 2 OS=Momordica charantia OX=3673 GN=LOC111022874 PE=3 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.7e-48
Identity = 97/100 (97.00%), Postives = 98/100 (98.00%), Query Frame = 0


Query: 1   MEMEQFKVLALGFVCLILLVRPLWLVSANMEGDALHSLRTSLQDPNNVLQSWDPTLVNPC 60
           MEMEQ+KVLALGFVCLI LV PLWLVSANMEGDALHSLRTSLQDPNNVLQSWDPTLVNPC
Sbjct: 1   MEMEQYKVLALGFVCLIFLVPPLWLVSANMEGDALHSLRTSLQDPNNVLQSWDPTLVNPC 60

Query: 61  TWFHVTCNNDNSVIRVDLGNAALSGTLVPQLGLLKNLQYL 101
           TWFHVTCNNDNSVIRVDLGNAALSGTLVPQLGLLKNLQYL
Sbjct: 61  TWFHVTCNNDNSVIRVDLGNAALSGTLVPQLGLLKNLQYL 100

[Close]

BLAST of Spg004848 vs. ExPASy TrEMBL
Match: A0A5D3D4I6 (Somatic embryogenesis receptor kinase 2 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold607G00200 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 8.5e-48
Identity = 97/100 (97.00%), Postives = 98/100 (98.00%), Query Frame = 0


Query: 1   MEMEQFKVLALGFVCLILLVRPLWLVSANMEGDALHSLRTSLQDPNNVLQSWDPTLVNPC 60
           MEME +KVLALGFV LILLVRPLWLVSANMEGDALHSLRTSLQDPNNVLQSWDPTLVNPC
Sbjct: 1   MEMELYKVLALGFVSLILLVRPLWLVSANMEGDALHSLRTSLQDPNNVLQSWDPTLVNPC 60

Query: 61  TWFHVTCNNDNSVIRVDLGNAALSGTLVPQLGLLKNLQYL 101
           TWFHVTCNNDNSVIRVDLGNAALSGTLVPQLGLLKNLQYL
Sbjct: 61  TWFHVTCNNDNSVIRVDLGNAALSGTLVPQLGLLKNLQYL 100

[Close]

BLAST of Spg004848 vs. ExPASy TrEMBL
Match: A0A5A7TC74 (Somatic embryogenesis receptor kinase 2 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold121G00950 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 8.5e-48
Identity = 97/100 (97.00%), Postives = 98/100 (98.00%), Query Frame = 0


Query: 1   MEMEQFKVLALGFVCLILLVRPLWLVSANMEGDALHSLRTSLQDPNNVLQSWDPTLVNPC 60
           MEME +KVLALGFV LILLVRPLWLVSANMEGDALHSLRTSLQDPNNVLQSWDPTLVNPC
Sbjct: 1   MEMELYKVLALGFVSLILLVRPLWLVSANMEGDALHSLRTSLQDPNNVLQSWDPTLVNPC 60

Query: 61  TWFHVTCNNDNSVIRVDLGNAALSGTLVPQLGLLKNLQYL 101
           TWFHVTCNNDNSVIRVDLGNAALSGTLVPQLGLLKNLQYL
Sbjct: 61  TWFHVTCNNDNSVIRVDLGNAALSGTLVPQLGLLKNLQYL 100

[Close]

BLAST of Spg004848 vs. ExPASy TrEMBL
Match: A0A1S3CL95 (somatic embryogenesis receptor kinase 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502258 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 8.5e-48
Identity = 97/100 (97.00%), Postives = 98/100 (98.00%), Query Frame = 0


Query: 1   MEMEQFKVLALGFVCLILLVRPLWLVSANMEGDALHSLRTSLQDPNNVLQSWDPTLVNPC 60
           MEME +KVLALGFV LILLVRPLWLVSANMEGDALHSLRTSLQDPNNVLQSWDPTLVNPC
Sbjct: 1   MEMELYKVLALGFVSLILLVRPLWLVSANMEGDALHSLRTSLQDPNNVLQSWDPTLVNPC 60

Query: 61  TWFHVTCNNDNSVIRVDLGNAALSGTLVPQLGLLKNLQYL 101
           TWFHVTCNNDNSVIRVDLGNAALSGTLVPQLGLLKNLQYL
Sbjct: 61  TWFHVTCNNDNSVIRVDLGNAALSGTLVPQLGLLKNLQYL 100

[Close]

BLAST of Spg004848 vs. TAIR 10
Match: AT1G34210.1 (somatic embryogenesis receptor-like kinase 2 )

HSP 1 Score: 159.8 bits (403), Expect = 1.1e-39
Identity = 80/101 (79.21%), Postives = 84/101 (83.17%), Query Frame = 0


Query: 3   MEQFKVLALGFVCLI---LLVRPLWLVSANMEGDALHSLRTSLQDPNNVLQSWDPTLVNP 62
           M + K  A GFVCLI   LL   LWL S+NMEGDALHSLR +L DPNNVLQSWDPTLVNP
Sbjct: 1   MGRKKFEAFGFVCLISLLLLFNSLWLASSNMEGDALHSLRANLVDPNNVLQSWDPTLVNP 60

Query: 63  CTWFHVTCNNDNSVIRVDLGNAALSGTLVPQLGLLKNLQYL 101
           CTWFHVTCNN+NSVIRVDLGNA LSG LVPQLG LKNLQYL
Sbjct: 61  CTWFHVTCNNENSVIRVDLGNADLSGQLVPQLGQLKNLQYL 101

[Close]

BLAST of Spg004848 vs. TAIR 10
Match: AT1G71830.1 (somatic embryogenesis receptor-like kinase 1 )

HSP 1 Score: 150.2 bits (378), Expect = 8.8e-37
Identity = 71/91 (78.02%), Postives = 80/91 (87.91%), Query Frame = 0


Query: 13  FVCLILLVRP---LWLVSANMEGDALHSLRTSLQDPNNVLQSWDPTLVNPCTWFHVTCNN 72
           F+ L L++ P   LWL SAN+EGDALH+LR +L DPNNVLQSWDPTLVNPCTWFHVTCNN
Sbjct: 8   FILLSLILLPNHSLWLASANLEGDALHTLRVTLVDPNNVLQSWDPTLVNPCTWFHVTCNN 67

Query: 73  DNSVIRVDLGNAALSGTLVPQLGLLKNLQYL 101
           +NSVIRVDLGNA LSG LVP+LG+LKNLQYL
Sbjct: 68  ENSVIRVDLGNAELSGHLVPELGVLKNLQYL 98

[Close]

BLAST of Spg004848 vs. TAIR 10
Match: AT5G21090.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 124.4 bits (311), Expect = 5.1e-29
Identity = 59/85 (69.41%), Postives = 69/85 (81.18%), Query Frame = 0


Query: 16  LILLVRPLWLVSANMEGDALHSLRTSLQDPNNVLQSWDPTLVNPCTWFHVTCNNDNSVIR 75
           L L +  + LV AN EGDAL++LR SL DP++VLQSWDPTLVNPCTWFHVTCN DN V R
Sbjct: 15  LTLTLALIHLVEANSEGDALYALRRSLTDPDHVLQSWDPTLVNPCTWFHVTCNQDNRVTR 74

Query: 76  VDLGNAALSGTLVPQLGLLKNLQYL 101
           VDLGN+ LSG L P+LG L++LQYL
Sbjct: 75  VDLGNSNLSGHLAPELGKLEHLQYL 99

[Close]

BLAST of Spg004848 vs. TAIR 10
Match: AT3G43740.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 124.0 bits (310), Expect = 6.7e-29
Identity = 59/94 (62.77%), Postives = 73/94 (77.66%), Query Frame = 0


Query: 7   KVLALGFVCLILLVRPLWLVSANMEGDALHSLRTSLQDPNNVLQSWDPTLVNPCTWFHVT 66
           ++LA   +  + L+R   L  AN EGDALH+LR SL DP+NV+QSWDPTLVNPCTWFHVT
Sbjct: 9   ELLAASLILTLALIR---LTEANSEGDALHALRRSLSDPDNVVQSWDPTLVNPCTWFHVT 68

Query: 67  CNNDNSVIRVDLGNAALSGTLVPQLGLLKNLQYL 101
           CN  + V R+DLGN+ LSG LVP+LG L++LQYL
Sbjct: 69  CNQHHQVTRLDLGNSNLSGHLVPELGKLEHLQYL 99

[Close]

BLAST of Spg004848 vs. TAIR 10
Match: AT3G43740.2 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 124.0 bits (310), Expect = 6.7e-29
Identity = 59/94 (62.77%), Postives = 73/94 (77.66%), Query Frame = 0


Query: 7   KVLALGFVCLILLVRPLWLVSANMEGDALHSLRTSLQDPNNVLQSWDPTLVNPCTWFHVT 66
           ++LA   +  + L+R   L  AN EGDALH+LR SL DP+NV+QSWDPTLVNPCTWFHVT
Sbjct: 9   ELLAASLILTLALIR---LTEANSEGDALHALRRSLSDPDNVVQSWDPTLVNPCTWFHVT 68

Query: 67  CNNDNSVIRVDLGNAALSGTLVPQLGLLKNLQYL 101
           CN  + V R+DLGN+ LSG LVP+LG L++LQYL
Sbjct: 69  CNQHHQVTRLDLGNSNLSGHLVPELGKLEHLQYL 99

The following BLAST results are available for this feature:

BLAST of Spg004848 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138361.1	2.7e-48	98.00	somatic embryogenesis receptor kinase 2 [Cucumis sativus] >KGN45898.1 hypothetic...	[more]
XP_022155852.1	3.6e-48	97.00	somatic embryogenesis receptor kinase 2 [Momordica charantia]	[more]
XP_038884639.1	6.1e-48	97.00	somatic embryogenesis receptor kinase 2 [Benincasa hispida]	[more]
XP_008464349.1	1.8e-47	97.00	PREDICTED: somatic embryogenesis receptor kinase 2 isoform X1 [Cucumis melo] >TY...	[more]
XP_008464350.1	1.8e-47	97.00	PREDICTED: somatic embryogenesis receptor kinase 2 isoform X2 [Cucumis melo]	[more]

BLAST of Spg004848 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XIC7	1.6e-38	79.21	Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=SERK2...	[more]
B8BB68	1.1e-36	83.52	LRR receptor kinase BAK1 OS=Oryza sativa subsp. indica OX=39946 GN=BAK1 PE=2 SV=...	[more]
Q6Z4U4	1.1e-36	83.52	LRR receptor kinase BAK1 OS=Oryza sativa subsp. japonica OX=39947 GN=BAK1 PE=1 S...	[more]
Q94AG2	1.2e-35	78.02	Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=SERK1...	[more]
Q7XV05	3.1e-31	75.00	LRR receptor kinase SERK2 OS=Oryza sativa subsp. japonica OX=39947 GN=SERK2 PE=1...	[more]

BLAST of Spg004848 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K8Y9	1.3e-48	98.00	Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G020...	[more]
A0A6J1DQH8	1.7e-48	97.00	somatic embryogenesis receptor kinase 2 OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A5D3D4I6	8.5e-48	97.00	Somatic embryogenesis receptor kinase 2 isoform X1 OS=Cucumis melo var. makuwa O...	[more]
A0A5A7TC74	8.5e-48	97.00	Somatic embryogenesis receptor kinase 2 isoform X1 OS=Cucumis melo var. makuwa O...	[more]
A0A1S3CL95	8.5e-48	97.00	somatic embryogenesis receptor kinase 2 isoform X2 OS=Cucumis melo OX=3656 GN=LO...	[more]

BLAST of Spg004848 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G34210.1	1.1e-39	79.21	somatic embryogenesis receptor-like kinase 2	[more]
AT1G71830.1	8.8e-37	78.02	somatic embryogenesis receptor-like kinase 1	[more]
AT5G21090.1	5.1e-29	69.41	Leucine-rich repeat (LRR) family protein	[more]
AT3G43740.1	6.7e-29	62.77	Leucine-rich repeat (LRR) family protein	[more]
AT3G43740.2	6.7e-29	62.77	Leucine-rich repeat (LRR) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 27..100 e-value: 1.3E-19 score: 72.3
IPR013210	Leucine-rich repeat-containing N-terminal, plant-type	PFAM	PF08263	LRRNT_2	coord: 28..68 e-value: 6.4E-12 score: 45.6
None	No IPR available	PANTHER	PTHR47988	SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1	coord: 10..100
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 31..100
IPR031048	Somatic embryogenesis receptor kinase	PANTHER	PTHR47988:SF34	LEUCINE-RICH REPEAT DOMAIN, L DOMAIN-LIKE PROTEIN-RELATED	coord: 10..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg004848.1	Spg004848.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0007178	transmembrane receptor protein serine/threonine kinase signaling pathway
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0005102	signaling receptor binding
molecular_function	GO:0004675	transmembrane receptor protein serine/threonine kinase activity