Spg004688 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg004688
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCCHC-type domain-containing protein
Locationscaffold5: 22495006 .. 22503067 (+)
RNA-Seq ExpressionSpg004688
SyntenySpg004688
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGAGAGTGGCCAGTTCGCCGACTCAATAAGCCTACCATTTCAGGGGCAAGACCGAATGGGGGCTGGGAACATAACAGTACAAGATGGAATTCACTCCTTCCCCTATTGGGGTAAGTAGATGTGTGTTCCCTTAAGGGCTGATTCTAGGGCTTGAACAAAGGCGCGCCGTCCTCTCCTAGCCTGAGAGGAACTCCTGTTTAGTGGTTGGACCCTAAACAACTTGTTCATTAGAGGAATCAGTGGTACTTAAGGAACCAGAGGTAACCTAGGGGTAAAACGGTAATTTGACCCAGCTGGTGTTACGAACACACGTGAAGGATTGACTTACTGCTTGGTCGATATCCGTGGACACAGAAATATTCTATAGTGAGAAGAGTGCAGCTGTGGGTCTTTAGTGGAGTGACCAACAGTTAACGAATGTTGACTAAACTTGGTCAATGAGTTTGGCCAATTAGTCTCGTATCGTTGGAGCTTCTGATCTGTAGGTCCATTAGGTCCCACTGGTAGCTCGTAAAGAGACTTGAGGCAATTAAGTATAAATTGTAAATTGAAAGTGTTCAATTTATTTGGGGAATCGTATAATGTATATTGATGCATTATAATATTAAGTTTATGAAACTTTATAATATAATTTTTGAATTAATTAATTCTTGAGAGAAAGTATTTGAAAGAGTTCAAATAAATTTAATATGAATTGGATTCATATTAATTTTAATTTTAATAAAATCCCTAAGATTAAATATATGATATTTAATTGGGTAAATTAATTAATTATGGAATTAATTATTTATTTATTAAAATTAGAGATCTTTTCCTATTAGGAAAGAAAATATTTGAAAGAGTTCAAATAAATTTAATATGAATTGGATTCATATTAATTTTAATTTTAATAAAATCCCTAAGATTAAATATATGATATTTAATTGGGAAATTAATTAATTATGGAATTAATTAATTATTTATTAAAATTAGAGACTTTTTCCTATTAGGAAAAGGTCTCCCTTTTCCTAATAGGAAAAAGGTCTTGGCCTTTACTATATATAGGACCCCTGGGGTGGGGTGAAAGGCATCCCATTCATTCTCCTACTCTCAGAGAATTCTCCCAAAGGCTCCCACAAGTCTCCTGCCTCTAGAAGTCTCAGAGTCATACCGGTGTAGCCATAGTGGTGGTGTTCACACTAGTTCGTGATTAATTCACAAGCAGTTGGTGAATTTAATCTGAGTCGTCAACGAGAGTAAGTAATTTGTTACTTTATAAATTAGATTTAGATCTAATATTTTTGTATGCTTAGCCTTTATATATATTTAGAATAGTTCTAATATTATTGCCAATGTATTGGTATTTTAGATTAAACAAAATTAATTACGAATCGGTCCCAATCACGCTTCCGCTTTACGGAATTATGGAATTCCAATCCTTCACATATTACCATGGATTTTTTGTTTGGATTACCCCGTACTTCTAGTGGACATGATGGTATATGGGTAATAGTGGATAGACTCACCAAGACAGCGCGGTTTATACCGATTAAAGCGACGTCTACACTAGATCAGCTAGCTAAACTATACGTCGACAGGATTGTGAGTCAACATGGAGTTCCAGTGTCCATAGTTTCAGATAGGGATCCAAGGTTTACTTCTAAGTTTTGGCCTAGTGTGCAGAAAGCAATGGGAACAAAGTTGAAATTCAGTACAGCGTTCCATCCCCAGACAGATGGTCAGTCAGAGAGGACCATCCAGACCTTAGAGGACATGTTGAGAGCATGTGTCCTTCAGTTTAAGGGAAGTTGGGATACCCACTTATCACTTATGGAGTTCGCTTATAATAACAGCTATCAGTCTAGTATCGGCATGGCACCATTCGAGGCTTTGTATGACAGACCATGCAGAACTCCTGTGTGCTGGAACGAAGTGGGAGAGCGAAAGCTAGTTGGTCCTGAGTTGGTACAAGTTACGTCAGACAATATTAAGCTGATTAGGGAGAATCTAAAAATAGCTCAGGATCGACATAAGAGCTATGCAGATAAGCGACGAAGAGACTTAGAGTTCCAGGTTGGAGATCAAGTTTTCTTAAAGTTATCTCCGTGGAAAGGTGTTCTTCGCTTTGGGAGGAAAGGTAAGCTGAGTCCTAGATATATTGGTCCTTACCAGATATTAGAACGAGTTGGACCAGCAGCCTATAGACTTGAATTGCCAGCGGAACTCGCTCGAATACATGATGTTTTTCATGTGTCCATGTTGAGGAAATATATTCCAGATCCATCACATGTGTTGCAAGGGCAACCGATTGAGCTGAAAGAAGACTTGAATTATAAAGAGGAAGCGGTTCAGATCCTAGACAGAAAGGAGCAAGTTTTGAGGAACAAAACGATCCCACTCGTGAAGGTTCTTTGGAGACATCACGGAGTTGAGGAGGCAACCTGGGAGTCAGAAGATCAAATGAGGAGGAGTTACCAGACACTCTTCACCTAAGAACTTCTAAATTTCGAGGACGAAATTTCATAAGGGGGAGGTAAGTTGTAAACCCGAGACTTTCCTTAGATAATTTTCTCTTGTCATCTATTGGTGGTTTGATTGTTGGACTAAGTTGTGGGGAATTATCAATTTAAAAAGAAAGGAAATAAAGGAATTAAATAAATGGAAAAGGATAAGGAAAAAGGAAAAAAAAAAAAAAAAAAGAAATGAAATGGGAAATTGACAGCAAGCAAACCCACCACCGCCTAACTTATTTCCAGCCCATTATCAGCCTCATTTCTCATCCTTTCCCACTAAAACTTTCAGAGCACTTTAAGGAGAGAGTGAAGGAGGAGGAAGAAGAAGAATTTCGTGGTTTGAGGTTGAAGAAGATAGGGAAAAGCTCATGCAAAGCCAGCCATTGCAGAATCTGTGTTCAACCTGTCAACCTCTGGTTTTTTATTCGGTTTGAGCTACACAGAAGGAATCAAGAGGTGAGGTTTGATTTTCTTGAACTTTAGTTCATTTTCTAACAAATTTCATGAAGGAAGCTTGACCTAAATCGTATGAGAAGTTGATGGTTTTTGGAATGGAAAACAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGTTTTCTCTGTTGTTTTGAGCATTCTGGGGTTTACAAGTTGAATCAGAAGCTCTATTTGGTATGGTTGGAAATCTTATTCAATTATCTACAACTTTCATGAAGAATTCGTGAGCCAAAAATGACTTGAAGTAGGTTTAATTTCAGGAGGAAGATAAAGGGTAACAGAGAAGCTCGAATCTGTGTTGTCTGATTTCGGGGCATTTCTGGACAAATTGGTTGGGAATCTCGTTTTCATTTCTTCAGGTAAGTTGTAGAGTGTTCGAAAATGAAGAGTTTGATGTGTATTTCATTAATTTTGGTTAAGTATAGATGAAGTTATGGGTGTTGGAAGTTAGGGTATAGAATCTGGAAAATCTGGAAAAGTAGAATGTGAATGTGATTCTTAATCCAATTGCTTAAAAATTTATGAGCATGGAAAGAAAAAACTATCTATGGTTCTAATGCTCGGTTTTCGTTATTTGACAGGCCAAGAGGAAATAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACTGTGAGTGACAAAATGAATTTCGAAAATGTTCTTAAACGGTTGTTCATGATTATATGTTTTACATGCTTTCCTATGAATGATACATGGTTTTTATGAACGGTTTCAAGCATGAGTTTTGAGCTCAGATTTTCTAATGAGGTTTATATACGAGCACGTGGCTAATGACTTTATGAAAAGTAGTTGAAACGATATCTTTTAAAGTAAAGTGTTTGTTAGCAAGTATTTTTTTAAATGATTTTCAGTTTTTCACGAGCAAGCTGAGTAAGCTTAAGTTTTACGAAAGATAACGATAAGCAGGCATGTTTTAATGTTTTCATGTGATTTTCTGAGATTTCTATTGACTACATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTTGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGCGGGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTTAGTTAAAACATTTGATGTACTTGATATGCCTTGCTAGATTTTTAATGACGAACTTGCGAGATGTTTTGGAAAGCCTTTATTATTACACGTTTATGTTAAACGCTTTGATTGAGCATATTTATACGTTTAAAGGTTTATCACGTGTTTTGACTTCCGGATTTAGAGTTTTAAAGTTAGTCACTCACTGGGCTTCGTAGCTCATTCTTTCAAAATGTTTTCCACTTTTCAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTTTAGATCAAGCTCCAGTACGTGGTTGGAGTTGTATATTGAGTCCGTTCATATTGTAAATGTTTTGTAAGGGTTGTATAATATCGTCCTAGAGGTCGTGGATGTATAACCCTAGTTGTATATGTTTTGGTCGTGATATCTATATCAGGTTACCTTCCAAACCAGGTTATGTCAGGGCTACACCATGTGTATGTTGAAAGGTTTCCGTGGATTCCGCTGTGTGGTGTTTCGTATAGAATGTTTTATATCAATGATTAGTATGTTTATCAGGTTCAGCGTTTCAGTAGGGTCAACAGGGATCGTTAGAGGTGACGATGTCTGTTGGCTTCACGCCGTCTTTCGGGCTAAGCTAGCAGGTGGTCCGGGAGGGGGTGTGACATTTTGGAACATCATTACATATATTCAAAGGAAACACTCGATTTTTTGTCATGGAAACTTTAGCAATAAGTCTCTCATGATTATCCCTCAAATACAAACAATTGTTTTTCATTTGAACTTCAAAACCTTTCTCTAACAATTGTCCTACACTCAATATATTGTTTTTTTATATTGGAAATGTAATAAACACTTGTAATATATTGATTTTCTCCATTTTTTAACCGAATGAGAATTTTACCTACTCCTTTGATGGCGGCCAAAGAATTGTCTCCAAAGGCAATATTACCTTTCTCCATCTCGTTCAACTCCACAAACATCTCGCATTTTCCACACATGTGGTTTGAGGCTCCGGTGTCAAGATACCACATACTATCTTGACTCTCTTCTTCTCCCTTTGAAACCATAAAGAAGGTTCCATTCTCCTCTGCATAATTGGATTGCCCTTGATGGGCTTTGGATGTGCTGGCAGTTGACTGATCCTGATGCTTACGATCACTTGATTCTGATTGAGATGAGTAACACTCATTTGCATAATGTCCATACTTATTACAATTATAACATTTTACCTGAGATTTATCTCTCCCAGATCTTCCACCACGTCTTCCACGACCTTGGCCTCCTCTTCCTCTTGAGGAATCACTCGAATTTTGAGAAACATCAGTGTTGGTTTCACCTCTTCCACCACGGCCTCGACCACCACGGCCTCGACCACCACGTCCACGACTATTCTCCTCCTTGAGTTTGAGTTGGAGAAGTTGCTCAACGGTCTCTGTTTGCTCCATCCTTCTTTTCTTTTTCTCCTCATAGGCTTGCAACGAGCCTATAAAATTGTTCAATAGTCATAATCTCGAGATCTTGTGTCTCCTCGATTGTCGTGGCAATAATCTCGAACTTTGTATTTAGGCTCCGTAGAACCTTTTCCATGACACGAACATCGGCGATTTCTTCACCGTTCCGTCTCAATTGGTTGACGACGGTCATTACTCTTGTGTGATATTCCGCTATCACCTCTGTCTCCTTCATTTGTAAAGATCCAAACTCACCACGTAAAGTTTGCAACCGTACCTTTTTCACACGATCGGCTCCTCTATGAGTCGATTGGAGTTTGTCCCATGCCGCCTTTGACGTCTCGACATTGGCGATGGTCTCAAACGTGTCTTCATCCACTGATTGGTACAAGATATAGAGGGCCTTCTTGTCCTTCTTTCTTGTCTCCTTTAACACATCTCTTTGCACTTGATCCGCTCCAGATTCCACCTCTTGGAAACCATTCTCTACGATCTCCCACACATCTTGTGCTCCTAGTAACGCTTTTATCTTGATGCTCCAATTGTCATAGTTGAGCTTGGAAAGCATCGGTAGTTGAAGCGAACCCATCCCACCGTTGGCCATTTCTCTCAATTTTTTTGCTACTCGCTCTGATACCAACTTTGTTAGAAAATGTGGAGGACAAATATGAATGGAGATGATTTTTCATTCAACTAAGCATGCCTTTGTATAGGCTTACAAAAGTAACCATAGAATACCAATGGTTCAAAACTTTAAATGTGATAAAATGCTCATAACTCCCTAACTCCCAAAAACTCAAAAGTCACTATTGGTTACAAGAAACCAAAAGCCAAAAGTCACAAAAACCAAAAGTCACACTAAATGCCACAAATAAAGTTTAATAATGAAAACTTTTGATTTTCTCAACATAGCTTGGATGCTTGTAAACATGGTAGTATTGATTCAGTGAAAATGGTGACAAGTACAATAGAATATCAAAATGATTTTATGTCAGAGGAACGGGATATACAATAAAGGATGCTGGAACAAAAAAGGATGTAGATTCTTTTACAGCATGTGTTGGTAGTCAAGCCCTTCGTTGCCAAGTTCTAAGTGGACGTGTCACTGGACAAAAAGAGATCGTATCTACAGAAAAGGTATTGTTATATAATTATTTTGAGTTAACTTTGCTGCATTAATTTCTACATTTATAGCTTTCTGATAGTATAGTGTTCCAAAAAATTAATTACGGATGACATTATACATTATGAATATGAGATATAGTATCAAGAATTTTAGAGGGAGTTTTTTGTCATAACTGTTATGGTTTGAGCATTGGAACACGTATGTAATAGTAGTTTGTATGCACAAATTTATGTCTGACCTTCTTGCAGTTTCACAAATCACAAGTTCTTTTGGGATGTAAAATGTTACTTTTGTTACTTCATAGTTGTTGATCAATTGGCCATACTTTTCCTTTTTCAATAAAATTGTTTTATTCTTTCCCTTCCCCCGTTCATTGTCTCTATGAGATGAGATTCTCAGTTTCAATATATTTTTGTTACTTGTCAGCGGGCATAAAATTTTGAATTTCCTTCTAAGATATAGTTGATGATCTCTACCACCGTGTATCGTGTGGATTGGTTAATTTTGATGATTGATTCAAAAAAACTTGTGTTGATTTTTCATTCTAAAGAATTTCCATGGGCAGGAAACTGGGCTTGCAATAAGAAAAAACGTGGTCCATTATCGGAAGGGAGAAAATAAAGGAAAAAGGTATTACTACTTCTTTCATGTCTTCATTGTTTTAAAGCGTCCAATTTTCTTGAGTTATCTATGATGTTTCTTTTTCATCGTACTCGTATTTGTGGGTGTGTTTTTACTAATAGTTTTTCTAACTCACCATGACAATTATATTTTCAAGATTAAGAAAAGAAAGAAGCAAGCAAAGAAGAAGAAGACAAAATCCACGGTAAGTTGTTGACAAATGTTTGTTGCTTTAGTTCATTCTAATCCAGTTTTTCATGAACTGGTTTTTGCCTAATTCTGGAATGGTTTGGTGTTGCACTCTGGCTCTCAGCTGGCTTGTTAAGTGATTATTACCTTATCCATTTCCAAATTATAAAAGTATCATGCTTCAGTTTTTTTTGGGCAATCTTTTTTTTTTTTTTTGGCCAATCAATAATGATTATTTATTATTGGTTTAGAAAAATGCTCTCTCTCTCTATATATATATCACATTTCCTACTTTTGCTGAGGCTTTTCTCCTTCTAAATATGCTTCTGATGCCTATCAATCAATCATAGGAAATTATGCTTCTGATGCATTGCTTAGCTCGCCTTCCAACTCAAAAGTGGGTTCTGATTTATCTGTACGAATTAAGGGAAGCATGCATGATAACAATGAAAATTATAAGTGCAATATTTTCTACTCCAATTACTTCAGGTCAATCTTCTGA

mRNA sequence

ATGGGTGAGAGTGGCCAGTTCGCCGACTCAATAAGCCTACCATTTCAGGGGCAAGACCGAATGGGGGCTGGGAACATAACAGTACAAGATGGAATTCACTCCTTCCCCTATTGGGAGCACTTTAAGGAGAGAGTGAAGGAGGAGGAAGAAGAAGAATTTCGTGGTTTGAGGTTGAAGAAGATAGGGAAAAGCTCATGCAAAGCCAGCCATTGCAGAATCTGTGTTCAACCTGTCAACCTCTGGTTTTTTATTCGGTTTGAGCTACACAGAAGGAATCAAGAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGTTTTCTCTGTTGTTTTGAGCATTCTGGGGCCAAGAGGAAATAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACTGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTTTAGATCAAGCTCCAGTACGTGGTTGGAGTTGTATATTGAGTCCGTTACCTTCCAAACCAGGTTATGTCAGGGCTACACCATGTGTATGTTGAAAGGTTTCCGTGGATTCCGCTGTGTGGTGTTTCGTATAGAATGTTTTATATCAATGATTAGTATGTTTATCAGAGGAACGGGATATACAATAAAGGATGCTGGAACAAAAAAGGATGTAGATTCTTTTACAGCATGTGTTGGTAGTCAAGCCCTTCGTTGCCAAGTTCTAAGTGGACGTGTCACTGGACAAAAAGAGATCGTATCTACAGAAAAGATTAAGAAAAGAAAGAAGCAAGCAAAGAAGAAGAAGACAAAATCCACGGTAAGCTTTTCTCCTTCTAAATATGCTTCTGATGCCTATCAATCAATCATAGGAAATTATGCTTCTGATGCATTGCTTAGCTCGCCTTCCAACTCAAAAGTGGGTTCTGATTTATCTGTACGAATTAAGGGAAGCATGCATGATAACAATGAAAATTATAAGTGCAATATTTTCTACTCCAATTACTTCAGGTCAATCTTCTGA

Coding sequence (CDS)

ATGGGTGAGAGTGGCCAGTTCGCCGACTCAATAAGCCTACCATTTCAGGGGCAAGACCGAATGGGGGCTGGGAACATAACAGTACAAGATGGAATTCACTCCTTCCCCTATTGGGAGCACTTTAAGGAGAGAGTGAAGGAGGAGGAAGAAGAAGAATTTCGTGGTTTGAGGTTGAAGAAGATAGGGAAAAGCTCATGCAAAGCCAGCCATTGCAGAATCTGTGTTCAACCTGTCAACCTCTGGTTTTTTATTCGGTTTGAGCTACACAGAAGGAATCAAGAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGTTTTCTCTGTTGTTTTGAGCATTCTGGGGCCAAGAGGAAATAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACTGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTTTAGATCAAGCTCCAGTACGTGGTTGGAGTTGTATATTGAGTCCGTTACCTTCCAAACCAGGTTATGTCAGGGCTACACCATGTGTATGTTGAAAGGTTTCCGTGGATTCCGCTGTGTGGTGTTTCGTATAGAATGTTTTATATCAATGATTAGTATGTTTATCAGAGGAACGGGATATACAATAAAGGATGCTGGAACAAAAAAGGATGTAGATTCTTTTACAGCATGTGTTGGTAGTCAAGCCCTTCGTTGCCAAGTTCTAAGTGGACGTGTCACTGGACAAAAAGAGATCGTATCTACAGAAAAGATTAAGAAAAGAAAGAAGCAAGCAAAGAAGAAGAAGACAAAATCCACGGTAAGCTTTTCTCCTTCTAAATATGCTTCTGATGCCTATCAATCAATCATAGGAAATTATGCTTCTGATGCATTGCTTAGCTCGCCTTCCAACTCAAAAGTGGGTTCTGATTTATCTGTACGAATTAAGGGAAGCATGCATGATAACAATGAAAATTATAAGTGCAATATTTTCTACTCCAATTACTTCAGGTCAATCTTCTGA

Protein sequence

MGESGQFADSISLPFQGQDRMGAGNITVQDGIHSFPYWEHFKERVKEEEEEEFRGLRLKKIGKSSCKASHCRICVQPVNLWFFIRFELHRRNQESTGFSSKAGGSLVFSVVLSILGPRGNRSSLQTGELDKTVEIELPVPDTLPTSAESFRSSSSTWLELYIESVTFQTRLCQGYTMCMLKGFRGFRCVVFRIECFISMISMFIRGTGYTIKDAGTKKDVDSFTACVGSQALRCQVLSGRVTGQKEIVSTEKIKKRKKQAKKKKTKSTVSFSPSKYASDAYQSIIGNYASDALLSSPSNSKVGSDLSVRIKGSMHDNNENYKCNIFYSNYFRSIF
Homology
[Close]
BLAST of Spg004688 vs. NCBI nr
Match: KAA0054353.1 (uncharacterized protein E6C27_scaffold24G00800 [Cucumis melo var. makuwa] >TYK12390.1 uncharacterized protein E5676_scaffold302G001720 [Cucumis melo var. makuwa])

HSP 1 Score: 117.9 bits (294), Expect = 1.7e-22
Identity = 82/169 (48.52%), Postives = 90/169 (53.25%), Query Frame = 0 

Query: 78  VNLWFFIRFELHRRNQESTGFSSKAGGSLVFSVVLSIL------------GPRGNRSSLQ 137
           VNLWF +    +     STGFSSK GG LVFS  LSIL             PRGN  SLQ
Sbjct: 13  VNLWFVLFGLSYPEETRSTGFSSKPGGFLVFSEALSILEVQKSNQKLYLVWPRGNSLSLQ 72

Query: 138 TGELDKT-----------------VEIELPVPDTLPTSAESFRSSSSTWLELYIES---- 197
           TGELDKT                 VEIELPV DTL TSAES  S+SSTWL+LY ES    
Sbjct: 73  TGELDKTVIFPLSTLSVLRDNDVVVEIELPVLDTLATSAESSGSNSSTWLKLYFESLHVE 132

Query: 198 --------VTFQTRLCQGYTMCMLKGFRGFRCVVFRIECFISMISMFIR 206
                   V   +R+C        +GFRGFRCVVF +E  IS I MFIR
Sbjct: 133 MLFYKPSDVMTTSRVC-------WEGFRGFRCVVFHVEYSISKIGMFIR 174

[Close]
BLAST of Spg004688 vs. NCBI nr
Match: KAA0052218.1 (uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa] >TYK01785.1 uncharacterized protein E5676_scaffold113G00130 [Cucumis melo var. makuwa])

HSP 1 Score: 110.2 bits (274), Expect = 3.6e-20
Identity = 61/90 (67.78%), Postives = 70/90 (77.78%), Query Frame = 0 

Query: 76  QPVNLWFFIRFELHRRNQESTGFSSKAGGSLVFSVVLSILGPRGNRSSLQTGELDKTVEI 135
           QP+ + F + + L     EST F SK+GG LVFS  LSIL PRGNR +L TG+LDKTVEI
Sbjct: 40  QPLIVLFGLSY-LEELRGESTRFLSKSGGFLVFSDALSIL-PRGNRPNLHTGKLDKTVEI 99

Query: 136 ELPVPDTLPTSAESFRSSSSTWLELYIESV 166
           ELPVPDTLPTSAES +S+SSTWLELY ESV
Sbjct: 100 ELPVPDTLPTSAESSKSNSSTWLELYFESV 127

[Close]
BLAST of Spg004688 vs. NCBI nr
Match: TYK11835.1 (uncharacterized protein E5676_scaffold152G00520 [Cucumis melo var. makuwa])

HSP 1 Score: 105.5 bits (262), Expect = 8.9e-19
Identity = 65/114 (57.02%), Postives = 69/114 (60.53%), Query Frame = 0 

Query: 78  VNLWFFIRFELHRRNQESTGFSSKAGGSLVFSVVLSI-----------LGPRGNRSSLQT 137
           VNLWF +    +    +STGFSSK GG LV S  LSI           LGPRGNR SLQT
Sbjct: 13  VNLWFVLFSLSYPEGTKSTGFSSKPGGFLVLSDALSILEIHKLNQKLYLGPRGNRLSLQT 72

Query: 138 GELDKTV---------------EIELPVPDTLPTSAESFRSSSSTWLELYIESV 166
           GELDKTV                IELPVPDTLPTSAES  S+SSTWLELY ESV
Sbjct: 73  GELDKTVIFSLSTLSVLRDNNAVIELPVPDTLPTSAESSGSNSSTWLELYFESV 126

[Close]
BLAST of Spg004688 vs. NCBI nr
Match: TYK08801.1 (hypothetical protein E5676_scaffold796G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 102.4 bits (254), Expect = 7.5e-18
Identity = 89/236 (37.71%), Postives = 96/236 (40.68%), Query Frame = 0 

Query: 32  IHSFP--YWEHFKERVKEEEEEEFRGLRLKKIGKSSCKASHCRICVQPVNLWFFIRFELH 91
           +H FP    EHF+ERVK EEEEEFRGLRLKKIGKSSCKA+HCRI       W        
Sbjct: 65  LHHFPSKLSEHFEERVK-EEEEEFRGLRLKKIGKSSCKANHCRI-------W-------- 124

Query: 92  RRNQESTGFSSKAGGSLVFSVVLSILG-----------------------PRGNRSSLQT 151
                STGFSSK  G LVFS  LSIL                        PRGNRSSLQT
Sbjct: 125 -----STGFSSKPRGFLVFSDALSILEVQKSNQKLYWDIESGKSGKWDVMPRGNRSSLQT 184

Query: 152 GELDK------------------------------------------------------- 164
           G+LDK                                                       
Sbjct: 185 GQLDKIEISIDYMTEILSLRLYGTVCPQVIFPLSTLSVLRDNDAVVSVGQTHYDKDDGVP 244

[Close]
BLAST of Spg004688 vs. NCBI nr
Match: KAA0041121.1 (hypothetical protein E6C27_scaffold128G00290 [Cucumis melo var. makuwa])

HSP 1 Score: 102.1 bits (253), Expect = 9.8e-18
Identity = 78/193 (40.41%), Postives = 89/193 (46.11%), Query Frame = 0 

Query: 78  VNLWFFIRFELHRRNQESTGFSSKAGGSLVFSVVLSILG--------------------- 137
           VNL F +    +    +ST FSSK GG LVFS  LSIL                      
Sbjct: 13  VNLLFVLFGLSYPEGTKSTRFSSKLGGFLVFSDALSILEVHKSNQKLYLDIESGKSGKWD 72

Query: 138 --PRGNRSSLQTGELDKT--------------------------------------VEIE 197
             PRGNR SLQTGELD T                                      VEIE
Sbjct: 73  IMPRGNRPSLQTGELDNTISIDYMTEILSLRLYGTVCTHVIFQLSTLSVLRDNDVVVEIE 132

Query: 198 LPVPDTLPTSAESFRSSSSTWLELYIESVTFQTRLCQGYTMCML-----KGFRGFRCVVF 205
           LPVPD LPTSAES  S+SSTWLELY ESV  +    +   + ++     +GFRGF CVVF
Sbjct: 133 LPVPDRLPTSAESSASNSSTWLELYFESVHVEMLFYKPSDVRIVSRVCWEGFRGFLCVVF 192

[Close]
BLAST of Spg004688 vs. ExPASy TrEMBL
Match: A0A5A7UEC1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001720 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 8.4e-23
Identity = 82/169 (48.52%), Postives = 90/169 (53.25%), Query Frame = 0 

Query: 78  VNLWFFIRFELHRRNQESTGFSSKAGGSLVFSVVLSIL------------GPRGNRSSLQ 137
           VNLWF +    +     STGFSSK GG LVFS  LSIL             PRGN  SLQ
Sbjct: 13  VNLWFVLFGLSYPEETRSTGFSSKPGGFLVFSEALSILEVQKSNQKLYLVWPRGNSLSLQ 72

Query: 138 TGELDKT-----------------VEIELPVPDTLPTSAESFRSSSSTWLELYIES---- 197
           TGELDKT                 VEIELPV DTL TSAES  S+SSTWL+LY ES    
Sbjct: 73  TGELDKTVIFPLSTLSVLRDNDVVVEIELPVLDTLATSAESSGSNSSTWLKLYFESLHVE 132

Query: 198 --------VTFQTRLCQGYTMCMLKGFRGFRCVVFRIECFISMISMFIR 206
                   V   +R+C        +GFRGFRCVVF +E  IS I MFIR
Sbjct: 133 MLFYKPSDVMTTSRVC-------WEGFRGFRCVVFHVEYSISKIGMFIR 174

[Close]
BLAST of Spg004688 vs. ExPASy TrEMBL
Match: A0A5A7UAH6 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00130 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.7e-20
Identity = 61/90 (67.78%), Postives = 70/90 (77.78%), Query Frame = 0 

Query: 76  QPVNLWFFIRFELHRRNQESTGFSSKAGGSLVFSVVLSILGPRGNRSSLQTGELDKTVEI 135
           QP+ + F + + L     EST F SK+GG LVFS  LSIL PRGNR +L TG+LDKTVEI
Sbjct: 40  QPLIVLFGLSY-LEELRGESTRFLSKSGGFLVFSDALSIL-PRGNRPNLHTGKLDKTVEI 99

Query: 136 ELPVPDTLPTSAESFRSSSSTWLELYIESV 166
           ELPVPDTLPTSAES +S+SSTWLELY ESV
Sbjct: 100 ELPVPDTLPTSAESSKSNSSTWLELYFESV 127

[Close]
BLAST of Spg004688 vs. ExPASy TrEMBL
Match: A0A5D3CJX3 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold152G00520 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 4.3e-19
Identity = 65/114 (57.02%), Postives = 69/114 (60.53%), Query Frame = 0 

Query: 78  VNLWFFIRFELHRRNQESTGFSSKAGGSLVFSVVLSI-----------LGPRGNRSSLQT 137
           VNLWF +    +    +STGFSSK GG LV S  LSI           LGPRGNR SLQT
Sbjct: 13  VNLWFVLFSLSYPEGTKSTGFSSKPGGFLVLSDALSILEIHKLNQKLYLGPRGNRLSLQT 72

Query: 138 GELDKTV---------------EIELPVPDTLPTSAESFRSSSSTWLELYIESV 166
           GELDKTV                IELPVPDTLPTSAES  S+SSTWLELY ESV
Sbjct: 73  GELDKTVIFSLSTLSVLRDNNAVIELPVPDTLPTSAESSGSNSSTWLELYFESV 126

[Close]
BLAST of Spg004688 vs. ExPASy TrEMBL
Match: A0A5D3CAC6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold796G00040 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 3.6e-18
Identity = 89/236 (37.71%), Postives = 96/236 (40.68%), Query Frame = 0 

Query: 32  IHSFP--YWEHFKERVKEEEEEEFRGLRLKKIGKSSCKASHCRICVQPVNLWFFIRFELH 91
           +H FP    EHF+ERVK EEEEEFRGLRLKKIGKSSCKA+HCRI       W        
Sbjct: 65  LHHFPSKLSEHFEERVK-EEEEEFRGLRLKKIGKSSCKANHCRI-------W-------- 124

Query: 92  RRNQESTGFSSKAGGSLVFSVVLSILG-----------------------PRGNRSSLQT 151
                STGFSSK  G LVFS  LSIL                        PRGNRSSLQT
Sbjct: 125 -----STGFSSKPRGFLVFSDALSILEVQKSNQKLYWDIESGKSGKWDVMPRGNRSSLQT 184

Query: 152 GELDK------------------------------------------------------- 164
           G+LDK                                                       
Sbjct: 185 GQLDKIEISIDYMTEILSLRLYGTVCPQVIFPLSTLSVLRDNDAVVSVGQTHYDKDDGVP 244

[Close]
BLAST of Spg004688 vs. ExPASy TrEMBL
Match: A0A5A7THH5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G00290 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 4.8e-18
Identity = 78/193 (40.41%), Postives = 89/193 (46.11%), Query Frame = 0 

Query: 78  VNLWFFIRFELHRRNQESTGFSSKAGGSLVFSVVLSILG--------------------- 137
           VNL F +    +    +ST FSSK GG LVFS  LSIL                      
Sbjct: 13  VNLLFVLFGLSYPEGTKSTRFSSKLGGFLVFSDALSILEVHKSNQKLYLDIESGKSGKWD 72

Query: 138 --PRGNRSSLQTGELDKT--------------------------------------VEIE 197
             PRGNR SLQTGELD T                                      VEIE
Sbjct: 73  IMPRGNRPSLQTGELDNTISIDYMTEILSLRLYGTVCTHVIFQLSTLSVLRDNDVVVEIE 132

Query: 198 LPVPDTLPTSAESFRSSSSTWLELYIESVTFQTRLCQGYTMCML-----KGFRGFRCVVF 205
           LPVPD LPTSAES  S+SSTWLELY ESV  +    +   + ++     +GFRGF CVVF
Sbjct: 133 LPVPDRLPTSAESSASNSSTWLELYFESVHVEMLFYKPSDVRIVSRVCWEGFRGFLCVVF 192

The following BLAST results are available for this feature:
BLAST of Spg004688 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0054353.11.7e-2248.52uncharacterized protein E6C27_scaffold24G00800 [Cucumis melo var. makuwa] >TYK12... [more]
KAA0052218.13.6e-2067.78uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa] >TYK0... [more]
TYK11835.18.9e-1957.02uncharacterized protein E5676_scaffold152G00520 [Cucumis melo var. makuwa][more]
TYK08801.17.5e-1837.71hypothetical protein E5676_scaffold796G00040 [Cucumis melo var. makuwa][more]
KAA0041121.19.8e-1840.41hypothetical protein E6C27_scaffold128G00290 [Cucumis melo var. makuwa][more]
BLAST of Spg004688 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg004688 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UEC18.4e-2348.52Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7UAH61.7e-2067.78CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A5D3CJX34.3e-1957.02CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A5D3CAC63.6e-1837.71Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7THH54.8e-1840.41Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of Spg004688 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg004688.1Spg004688.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding
molecular_function GO:0003824 catalytic activity