Spg004574 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg004574
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	RING-H2 finger protein ATL7
Location	scaffold9: 10096680 .. 10099136 (+)
RNA-Seq Expression	Spg004574
Synteny	Spg004574

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCGTTTTCATTATAATATTATATGGAGACGAGGAAAATCGTATACTTAAAGCCTTCGTGTACTCTCATTCTGCATTGCAATTCTTTTCGCTCTTTCCACCGAACTTCCTTCCCTGTTGGCTCTTTAGATCTTTGTGGTCGTTGAATCCAAACAGTGCCCCTTCGCCGCATACTAATTTCTTGTTTCTTTATTTTTCTCACTCTCATTGCTACTGTTTCTACTGATTTCGTTCTTATTTGGGTTCTGTTGGTTTCATCTAATTCATAACCTCCCTCGTTGAAATCCTCGGATTCGTCCAGATTTGCACTTGTTCTCATTTGGGGTTTTTCTATACTAGCATTATTTTCAACTGTCTTAAAGTTACTCTCTGAATTGAACTGCTAATGTCTCCATTTTTCTTGCTTTGATATCTTGATTTTGTTGTTGTGGCTGTTAAGCACATTGTACACTGTTTCCTCTTCGTTTTTCTGGATCTGGGTATTTCTGATTAGCTTTAATTTAGCTGAAGATTTCTGTCTTGGCTTCTGGGTTTTTACCAAAACTGCAAATTACTTCTGGGTTTGTGAGATCTAGCACATTGGGGTTTTTGTCAACATGGCTTATGACCATTTGGATCCATCTAAAGGCTATTCAGTTGCTGCTTCAGGACCAGGTCCAGTTTCAAGACCTGCACCTGAACTGAAGCTCTATCAGTTTTTTGTCTTCTGTATTCCAGTTCTTTTCACTTTCATTCTTCTCTTCCTTTTCTATCTCCTTTATCTTCGTCGACGAAGGGCCGATTGGACTTCCATCCGAATGCGAGCTTCTGCTGCAGTCAACAGCAATAACGTCTCCTCAGTATGCTTTTTGCTTTAGTTTCCCTGTGCTTTTGACAGTCTATAGAATGATTTGTATGTGTGCTGTGCTTTGTTTTTTTATTATTAATGATTTTGAACTTTCCCTTATTGTTGTGGTTGAGCAGTCTGAAGTTGGGTTGAAGAAGGAATTCAGAGAGATGCTGCCCATTATTGTATACAATGAGACATTCTTTGTCACTGACACACTGTGAGTGGATTTTCTTATGTCTGGTTTCTGTATTTTGTTAAAAGTTTATATTTGAAAGGCATATTACATCATCGTTTTCTGTTAAATGTGTTCTGGTTATTTGCCTTATTCTTCTGTTAAGTATTATTATATGTGAACTTAGAATGAGTTGAAGAACTCTTGAATGAGCATCAAGTCTAGAGATTCTGCACTGTAATATTTGCAAGGTCTTGAGTTGTTACTAGTTTCCTTTTAGATAGCTAGTGTGACTTTATTGTTGGTACTGTATGAGACCAATAAATTACTAAATCCATCATCTAGTCATTTTAGTTTTTTTTTTCCCTTCGTTTTTTAACAATAGTACAAGTGCATTGGACGGGTTCGAACGATGGTTGGAACTTTTAATAAAATCGGCTAATTATGGATTAGCTCGATTTTGATTAAGAAAAGAGTATTTGTGTTGGTTGGCATTTGTAGGATGAAATTAGGCTTATCCACATCATAAAGGTCTACTAAAAATATTGGTCTACTTGATAGGAAATTTTGAAGATTACAAGATAAAGTGCTGTATGAATTTGGAAAACTGAAAAGAGTTGGCTGTTGATCATTAAAGCCAGCCTATGGTTTGTTGACTTTCTCTTTTCTGCCTCATCTTGAGAGAGCAATCCTTGTGTGTTTGTTTGTTGTTGCAGATGCTCAGTCTGTTTAGGGGAATACAAAACAGAAGATAAGCTTCAGAAGATACCATCATGTGGGCATGTATTTCACCTGGACTGCATTGATCATTGGCTATCCAACCACAACACTTGCCCACTCTGCCGTCTCTCCGTCCTTTCTCCGTCTCAACCACCACATATTCAGATTGAGATGGGACTCGAATCGTCCAACGAACAAGAACGAGCCAGAGATACTCCTCAAGACAGTAATCAAGCTTGTCAACATACAACATCTCCTGTGTAATATCATGATTAGAGCCTTTCAACGAGGAACAATCATTCATTGCTGCAGTAACTAAAGGGGATGCAGCTTTGGATAATTCGTCGAGAGGAGACGACCCAATGGAGACATCGGGACATAAATCGCTGTTCCATAACAAATTATCAACGTCCTCAACCCTCTTTTTTAGAATAGAGTTGTAATTTAGGTAGGGGGGAGGGGGTGTAATTGTTTACCCAAGTGCTGTAACATTTCAAGACTGATGTATGAGAACCATGACCTTTCAAAGTACTTTGTTCCAACTCCAAACAGATCAGGAAGCACTTCTTGTTCTTGCCAACACCATTAAGAAACATGCTTCACCACTTTTTAGTCAAATGTTATGGTACCCATACTCTGTTTTTGAGGAAATTGGTACCACCCTGGCATAATAGACCCTACAAGGCCAGAAATGTAATCTATGAATTCATAATAAATATATAATATCCAAATTGTG

mRNA sequence

ATGGCTTATGACCATTTGGATCCATCTAAAGGCTATTCAGTTGCTGCTTCAGGACCAGGTCCAGTTTCAAGACCTGCACCTGAACTGAAGCTCTATCAGTTTTTTGTCTTCTGTATTCCAGTTCTTTTCACTTTCATTCTTCTCTTCCTTTTCTATCTCCTTTATCTTCGTCGACGAAGGGCCGATTGGACTTCCATCCGAATGCGAGCTTCTGCTGCAGTCAACAGCAATAACGTCTCCTCATCTGAAGTTGGGTTGAAGAAGGAATTCAGAGAGATGCTGCCCATTATTGTATACAATGAGACATTCTTTGTCACTGACACACTGTGA

Coding sequence (CDS)

ATGGCTTATGACCATTTGGATCCATCTAAAGGCTATTCAGTTGCTGCTTCAGGACCAGGTCCAGTTTCAAGACCTGCACCTGAACTGAAGCTCTATCAGTTTTTTGTCTTCTGTATTCCAGTTCTTTTCACTTTCATTCTTCTCTTCCTTTTCTATCTCCTTTATCTTCGTCGACGAAGGGCCGATTGGACTTCCATCCGAATGCGAGCTTCTGCTGCAGTCAACAGCAATAACGTCTCCTCATCTGAAGTTGGGTTGAAGAAGGAATTCAGAGAGATGCTGCCCATTATTGTATACAATGAGACATTCTTTGTCACTGACACACTGTGA

Protein sequence

MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYNETFFVTDTL

Homology

[Close]

BLAST of Spg004574 vs. NCBI nr
Match: XP_038889575.1 (RING-H2 finger protein ATL7-like [Benincasa hispida])

HSP 1 Score: 196.8 bits (499), Expect = 9.5e-47
Identity = 101/109 (92.66%), Postives = 105/109 (96.33%), Query Frame = 0


Query: 1   MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRR 60
           MAYDHLDPSK YSV ASGPG VSRPAPELKLYQFFVFCIP+LFTFILLFLFYLLYLRRRR
Sbjct: 1   MAYDHLDPSKSYSV-ASGPGSVSRPAPELKLYQFFVFCIPILFTFILLFLFYLLYLRRRR 60

Query: 61  ADWTSIRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYNETFFVTDTL 110
           ADWTSIRMR SAAVN+NN+S+SEVGLKKEFREMLPIIVYNETFFVTDTL
Sbjct: 61  ADWTSIRMRTSAAVNNNNISTSEVGLKKEFREMLPIIVYNETFFVTDTL 108

[Close]

BLAST of Spg004574 vs. NCBI nr
Match: XP_004141521.1 (RING-H2 finger protein ATL58 [Cucumis sativus] >KGN52607.1 hypothetical protein Csa_008718 [Cucumis sativus])

HSP 1 Score: 190.3 bits (482), Expect = 8.9e-45
Identity = 96/109 (88.07%), Postives = 103/109 (94.50%), Query Frame = 0


Query: 1   MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRR 60
           MAYDHLDPSK Y+V ASGPG  S+PAPELK+YQFFVFCIP+LFTFILLFLFYLLYLRRRR
Sbjct: 1   MAYDHLDPSKSYTV-ASGPGSASKPAPELKVYQFFVFCIPILFTFILLFLFYLLYLRRRR 60

Query: 61  ADWTSIRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYNETFFVTDTL 110
           ADWTSIRMR SAA N+NN+S+SEVGLKKEFREMLPIIVYNETFFVTDTL
Sbjct: 61  ADWTSIRMRTSAAANNNNISTSEVGLKKEFREMLPIIVYNETFFVTDTL 108

[Close]

BLAST of Spg004574 vs. NCBI nr
Match: KAA0039350.1 (RING-H2 finger protein ATL7 [Cucumis melo var. makuwa] >TYK00533.1 RING-H2 finger protein ATL7 [Cucumis melo var. makuwa])

HSP 1 Score: 184.1 bits (466), Expect = 6.4e-43
Identity = 95/109 (87.16%), Postives = 100/109 (91.74%), Query Frame = 0


Query: 1   MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRR 60
           M YDHLD SK YSV ASGPG VS+PAPELKLYQF VFCIP+LFTFILLFLFYLLYLRRRR
Sbjct: 1   MTYDHLDRSKSYSV-ASGPGSVSKPAPELKLYQFVVFCIPILFTFILLFLFYLLYLRRRR 60

Query: 61  ADWTSIRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYNETFFVTDTL 110
           ADWTSIRMR SAA  +NN+S+SEVGLKKEFREMLPIIVYNETFFVTDTL
Sbjct: 61  ADWTSIRMRTSAAATNNNISTSEVGLKKEFREMLPIIVYNETFFVTDTL 108

[Close]

BLAST of Spg004574 vs. NCBI nr
Match: XP_008459509.1 (PREDICTED: RING-H2 finger protein ATL7 [Cucumis melo])

HSP 1 Score: 184.1 bits (466), Expect = 6.4e-43
Identity = 95/109 (87.16%), Postives = 100/109 (91.74%), Query Frame = 0


Query: 1   MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRR 60
           M YDHLD SK YSV ASGPG VS+PAPELKLYQF VFCIP+LFTFILLFLFYLLYLRRRR
Sbjct: 1   MTYDHLDRSKSYSV-ASGPGSVSKPAPELKLYQFVVFCIPILFTFILLFLFYLLYLRRRR 60

Query: 61  ADWTSIRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYNETFFVTDTL 110
           ADWTSIRMR SAA  +NN+S+SEVGLKKEFREMLPIIVYNETFFVTDTL
Sbjct: 61  ADWTSIRMRTSAAATNNNISTSEVGLKKEFREMLPIIVYNETFFVTDTL 108

[Close]

BLAST of Spg004574 vs. NCBI nr
Match: XP_022973422.1 (RING-H2 finger protein ATL7-like [Cucurbita maxima])

HSP 1 Score: 178.7 bits (452), Expect = 2.7e-41
Identity = 88/108 (81.48%), Postives = 101/108 (93.52%), Query Frame = 0


Query: 1   MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRR 60
           MAYDHLDPSKGYSV ASGPGP S+PA E+K+YQFFVFCIP++ TFI+L LFYLLYLRRRR
Sbjct: 1   MAYDHLDPSKGYSV-ASGPGPASKPASEMKIYQFFVFCIPIVVTFIILLLFYLLYLRRRR 60

Query: 61  ADWTSIRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYNETFFVTDT 109
           ADW+SIRMR S AVN+N++S++EVGLKKEFREMLPIIVYNE+FFVTDT
Sbjct: 61  ADWSSIRMRTSTAVNNNDISTAEVGLKKEFREMLPIIVYNESFFVTDT 107

[Close]

BLAST of Spg004574 vs. ExPASy Swiss-Prot
Match: Q570X5 (RING-H2 finger protein ATL58 OS=Arabidopsis thaliana OX=3702 GN=ATL58 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.5e-18
Identity = 53/108 (49.07%), Postives = 76/108 (70.37%), Query Frame = 0


Query: 1   MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRR 60
           M+Y + +P + YS A S        +PELKLYQ F+F +P+ FTFI+LFLFYL+YLRR  
Sbjct: 1   MSYSNSNP-ENYSAATS--------SPELKLYQAFIFSVPICFTFIILFLFYLIYLRRSS 60

Query: 61  ADWTSIRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYNETFFVTDT 109
           +D +S+ MR +  +  N++S+ E+GL KE REMLPI+V+ E+F V D+
Sbjct: 61  SDLSSLGMR-TTFIPGNSLSTIELGLSKELREMLPIVVFKESFTVMDS 98

[Close]

BLAST of Spg004574 vs. ExPASy Swiss-Prot
Match: Q9SN28 (RING-H2 finger protein ATL7 OS=Arabidopsis thaliana OX=3702 GN=ATL7 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 4.1e-16
Identity = 43/90 (47.78%), Postives = 65/90 (72.22%), Query Frame = 0


Query: 23  SRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRR---RADWTSIRMRASAAV-NSNN 82
           S  + +LKLYQ F+F +P+ FTFI+LF+ Y++YLRR      DW+S+ MR    V  +NN
Sbjct: 20  STESEKLKLYQAFIFSVPICFTFIVLFVLYVIYLRRNSTTNVDWSSLGMRGGTFVPTNNN 79

Query: 83  VSSSEVGLKKEFREMLPIIVYNETFFVTDT 109
           +S++E+GL K+ REMLP+++Y E+F V D+
Sbjct: 80  LSTAELGLSKDIREMLPVVIYKESFIVKDS 109

[Close]

BLAST of Spg004574 vs. ExPASy Swiss-Prot
Match: Q9SN27 (E3 ubiquitin-protein ligase ATL59 OS=Arabidopsis thaliana OX=3702 GN=ATL59 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 3.4e-07
Identity = 30/78 (38.46%), Postives = 50/78 (64.10%), Query Frame = 0


Query: 35  FVFCIPVLFTFILLFLFYLLYLRRRRA----DWTSIRMRASAAVNSNNVSSSEVGLKKEF 94
           F+ C+P+    ++L +  +LY+ RR +    DW+S+         +NN+S++E+GL K+ 
Sbjct: 24  FIVCVPIC---VILIVLLVLYIMRRNSNTNVDWSSL---GGFVPTNNNLSTAELGLSKDI 83

Query: 95  REMLPIIVYNETFFVTDT 109
           REMLPI++Y E+F V DT
Sbjct: 84  REMLPIVIYKESFTVNDT 95

[Close]

BLAST of Spg004574 vs. ExPASy Swiss-Prot
Match: Q84TF5 (Probable E3 ubiquitin-protein ligase RHA4A OS=Arabidopsis thaliana OX=3702 GN=RHA4A PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 3.8e-06
Identity = 33/89 (37.08%), Postives = 54/89 (60.67%), Query Frame = 0


Query: 26  APELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTS-----IRMRASAAVNSNNVS 85
           A +LKLYQ F+F IP+LF+ IL  LFYL YL+RR +  +S     + + +S   +S+  S
Sbjct: 16  AIQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSPSPMILPVSSSHQTSSHLPS 75

Query: 86  SSEVGLKKEFREMLPIIVYNETFFVTDTL 110
              + +K E ++ L ++++NE     D+L
Sbjct: 76  VCLLDVKVELKDKLHVVLFNEELGTRDSL 104

[Close]

BLAST of Spg004574 vs. ExPASy TrEMBL
Match: A0A0A0KVZ9 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G647300 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 4.3e-45
Identity = 96/109 (88.07%), Postives = 103/109 (94.50%), Query Frame = 0


Query: 1   MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRR 60
           MAYDHLDPSK Y+V ASGPG  S+PAPELK+YQFFVFCIP+LFTFILLFLFYLLYLRRRR
Sbjct: 1   MAYDHLDPSKSYTV-ASGPGSASKPAPELKVYQFFVFCIPILFTFILLFLFYLLYLRRRR 60

Query: 61  ADWTSIRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYNETFFVTDTL 110
           ADWTSIRMR SAA N+NN+S+SEVGLKKEFREMLPIIVYNETFFVTDTL
Sbjct: 61  ADWTSIRMRTSAAANNNNISTSEVGLKKEFREMLPIIVYNETFFVTDTL 108

[Close]

BLAST of Spg004574 vs. ExPASy TrEMBL
Match: A0A5A7T7X7 (RING-H2 finger protein ATL7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001430 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 3.1e-43
Identity = 95/109 (87.16%), Postives = 100/109 (91.74%), Query Frame = 0


Query: 1   MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRR 60
           M YDHLD SK YSV ASGPG VS+PAPELKLYQF VFCIP+LFTFILLFLFYLLYLRRRR
Sbjct: 1   MTYDHLDRSKSYSV-ASGPGSVSKPAPELKLYQFVVFCIPILFTFILLFLFYLLYLRRRR 60

Query: 61  ADWTSIRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYNETFFVTDTL 110
           ADWTSIRMR SAA  +NN+S+SEVGLKKEFREMLPIIVYNETFFVTDTL
Sbjct: 61  ADWTSIRMRTSAAATNNNISTSEVGLKKEFREMLPIIVYNETFFVTDTL 108

[Close]

BLAST of Spg004574 vs. ExPASy TrEMBL
Match: A0A1S3C9U6 (RING-H2 finger protein ATL7 OS=Cucumis melo OX=3656 GN=LOC103498626 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 3.1e-43
Identity = 95/109 (87.16%), Postives = 100/109 (91.74%), Query Frame = 0


Query: 1   MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRR 60
           M YDHLD SK YSV ASGPG VS+PAPELKLYQF VFCIP+LFTFILLFLFYLLYLRRRR
Sbjct: 1   MTYDHLDRSKSYSV-ASGPGSVSKPAPELKLYQFVVFCIPILFTFILLFLFYLLYLRRRR 60

Query: 61  ADWTSIRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYNETFFVTDTL 110
           ADWTSIRMR SAA  +NN+S+SEVGLKKEFREMLPIIVYNETFFVTDTL
Sbjct: 61  ADWTSIRMRTSAAATNNNISTSEVGLKKEFREMLPIIVYNETFFVTDTL 108

[Close]

BLAST of Spg004574 vs. ExPASy TrEMBL
Match: A0A6J1I7H2 (RING-H2 finger protein ATL7-like OS=Cucurbita maxima OX=3661 GN=LOC111471970 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.3e-41
Identity = 88/108 (81.48%), Postives = 101/108 (93.52%), Query Frame = 0


Query: 1   MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRR 60
           MAYDHLDPSKGYSV ASGPGP S+PA E+K+YQFFVFCIP++ TFI+L LFYLLYLRRRR
Sbjct: 1   MAYDHLDPSKGYSV-ASGPGPASKPASEMKIYQFFVFCIPIVVTFIILLLFYLLYLRRRR 60

Query: 61  ADWTSIRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYNETFFVTDT 109
           ADW+SIRMR S AVN+N++S++EVGLKKEFREMLPIIVYNE+FFVTDT
Sbjct: 61  ADWSSIRMRTSTAVNNNDISTAEVGLKKEFREMLPIIVYNESFFVTDT 107

[Close]

BLAST of Spg004574 vs. ExPASy TrEMBL
Match: A0A6J1EX46 (RING-H2 finger protein ATL7-like OS=Cucurbita moschata OX=3662 GN=LOC111438892 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 3.8e-41
Identity = 87/108 (80.56%), Postives = 100/108 (92.59%), Query Frame = 0


Query: 1   MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRR 60
           MAYDHLDPSKGYSV ASGPGP S+PA E+K+YQFFVFCIP++ TFI+L LFYLLYLRRRR
Sbjct: 1   MAYDHLDPSKGYSV-ASGPGPASKPASEMKIYQFFVFCIPIVVTFIILLLFYLLYLRRRR 60

Query: 61  ADWTSIRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYNETFFVTDT 109
           ADW+SIRMR S  VN+N++S++EVGLKKEFREMLPIIVYNE+FFVTDT
Sbjct: 61  ADWSSIRMRTSTTVNNNDISTAEVGLKKEFREMLPIIVYNESFFVTDT 107

[Close]

BLAST of Spg004574 vs. TAIR 10
Match: AT1G33480.1 (RING/U-box superfamily protein )

HSP 1 Score: 93.6 bits (231), Expect = 1.1e-19
Identity = 53/108 (49.07%), Postives = 76/108 (70.37%), Query Frame = 0


Query: 1   MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRR 60
           M+Y + +P + YS A S        +PELKLYQ F+F +P+ FTFI+LFLFYL+YLRR  
Sbjct: 1   MSYSNSNP-ENYSAATS--------SPELKLYQAFIFSVPICFTFIILFLFYLIYLRRSS 60

Query: 61  ADWTSIRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYNETFFVTDT 109
           +D +S+ MR +  +  N++S+ E+GL KE REMLPI+V+ E+F V D+
Sbjct: 61  SDLSSLGMR-TTFIPGNSLSTIELGLSKELREMLPIVVFKESFTVMDS 98

[Close]

BLAST of Spg004574 vs. TAIR 10
Match: AT4G10150.1 (RING/U-box superfamily protein )

HSP 1 Score: 85.5 bits (210), Expect = 2.9e-17
Identity = 43/90 (47.78%), Postives = 65/90 (72.22%), Query Frame = 0


Query: 23  SRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRR---RADWTSIRMRASAAV-NSNN 82
           S  + +LKLYQ F+F +P+ FTFI+LF+ Y++YLRR      DW+S+ MR    V  +NN
Sbjct: 20  STESEKLKLYQAFIFSVPICFTFIVLFVLYVIYLRRNSTTNVDWSSLGMRGGTFVPTNNN 79

Query: 83  VSSSEVGLKKEFREMLPIIVYNETFFVTDT 109
           +S++E+GL K+ REMLP+++Y E+F V D+
Sbjct: 80  LSTAELGLSKDIREMLPVVIYKESFIVKDS 109

[Close]

BLAST of Spg004574 vs. TAIR 10
Match: AT4G10160.1 (RING/U-box superfamily protein )

HSP 1 Score: 55.8 bits (133), Expect = 2.4e-08
Identity = 30/78 (38.46%), Postives = 50/78 (64.10%), Query Frame = 0


Query: 35  FVFCIPVLFTFILLFLFYLLYLRRRRA----DWTSIRMRASAAVNSNNVSSSEVGLKKEF 94
           F+ C+P+    ++L +  +LY+ RR +    DW+S+         +NN+S++E+GL K+ 
Sbjct: 24  FIVCVPIC---VILIVLLVLYIMRRNSNTNVDWSSL---GGFVPTNNNLSTAELGLSKDI 83

Query: 95  REMLPIIVYNETFFVTDT 109
           REMLPI++Y E+F V DT
Sbjct: 84  REMLPIVIYKESFTVNDT 95

[Close]

BLAST of Spg004574 vs. TAIR 10
Match: AT4G24015.1 (RING/U-box superfamily protein )

HSP 1 Score: 52.4 bits (124), Expect = 2.7e-07
Identity = 33/89 (37.08%), Postives = 54/89 (60.67%), Query Frame = 0


Query: 26  APELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTS-----IRMRASAAVNSNNVS 85
           A +LKLYQ F+F IP+LF+ IL  LFYL YL+RR +  +S     + + +S   +S+  S
Sbjct: 16  AIQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSPSPMILPVSSSHQTSSHLPS 75

Query: 86  SSEVGLKKEFREMLPIIVYNETFFVTDTL 110
              + +K E ++ L ++++NE     D+L
Sbjct: 76  VCLLDVKVELKDKLHVVLFNEELGTRDSL 104

The following BLAST results are available for this feature:

BLAST of Spg004574 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889575.1	9.5e-47	92.66	RING-H2 finger protein ATL7-like [Benincasa hispida]	[more]
XP_004141521.1	8.9e-45	88.07	RING-H2 finger protein ATL58 [Cucumis sativus] >KGN52607.1 hypothetical protein ...	[more]
KAA0039350.1	6.4e-43	87.16	RING-H2 finger protein ATL7 [Cucumis melo var. makuwa] >TYK00533.1 RING-H2 finge...	[more]
XP_008459509.1	6.4e-43	87.16	PREDICTED: RING-H2 finger protein ATL7 [Cucumis melo]	[more]
XP_022973422.1	2.7e-41	81.48	RING-H2 finger protein ATL7-like [Cucurbita maxima]	[more]

BLAST of Spg004574 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q570X5	1.5e-18	49.07	RING-H2 finger protein ATL58 OS=Arabidopsis thaliana OX=3702 GN=ATL58 PE=2 SV=1	[more]
Q9SN28	4.1e-16	47.78	RING-H2 finger protein ATL7 OS=Arabidopsis thaliana OX=3702 GN=ATL7 PE=2 SV=1	[more]
Q9SN27	3.4e-07	38.46	E3 ubiquitin-protein ligase ATL59 OS=Arabidopsis thaliana OX=3702 GN=ATL59 PE=1 ...	[more]
Q84TF5	3.8e-06	37.08	Probable E3 ubiquitin-protein ligase RHA4A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]

BLAST of Spg004574 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVZ9	4.3e-45	88.07	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G647300 P...	[more]
A0A5A7T7X7	3.1e-43	87.16	RING-H2 finger protein ATL7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3C9U6	3.1e-43	87.16	RING-H2 finger protein ATL7 OS=Cucumis melo OX=3656 GN=LOC103498626 PE=4 SV=1	[more]
A0A6J1I7H2	1.3e-41	81.48	RING-H2 finger protein ATL7-like OS=Cucurbita maxima OX=3661 GN=LOC111471970 PE=...	[more]
A0A6J1EX46	3.8e-41	80.56	RING-H2 finger protein ATL7-like OS=Cucurbita moschata OX=3662 GN=LOC111438892 P...	[more]

BLAST of Spg004574 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G33480.1	1.1e-19	49.07	RING/U-box superfamily protein	[more]
AT4G10150.1	2.9e-17	47.78	RING/U-box superfamily protein	[more]
AT4G10160.1	2.4e-08	38.46	RING/U-box superfamily protein	[more]
AT4G24015.1	2.7e-07	37.08	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg004574.1	Spg004574.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0061630	ubiquitin protein ligase activity