Spg004499 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg004499
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Thioredoxin-like protein
Location	scaffold9: 13181007 .. 13183938 (-)
RNA-Seq Expression	Spg004499
Synteny	Spg004499

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAGATTTTTCCCCTTCGCTTTGGCATCTCCGATAAGCCAAAACAGACGACAGAATTCCTCTATCGACATTGTTGGAGCAGTGAGCGCTTCACATGGCGGCATCCATTTCAACTTCGGCTTATCCTCTCCTCACCTCAGAGCGCTCCAACCGCTTGGTTGCTAATGATTCATCTTTGTCGAGGTTGTCGTCCACCTCGTCTCTACAGCTACCAGTTCAGCTTCGGTGCGTTCGACTCGGAAACAATGGGGTTTCAGCTCCGTCGCGGTCTCGAATCTTGCCTGTGGTAATAATCTCTTTTCTTAGATCTGTATGTCGTTGTAATGGAGGAACCTGATAAAGAAATTGCAATATATGGACTTTCCTTTTGTTCTCATTTTTTATTTTCTTCGAATCTAATTTTCAGCGAATTATTGTTAATTTTTACACAGAACTTGAAACTACACGGTTCGATTAGAATTTTACCTTAGAAAAAAGTATACTCTATTTGGTTCTATTACTTTTAGGTTTATCCGAAAATTCAGTTCTCAAGTAGATTTCCCGAAGTACTTGTTCATTCCGAATGATTGGAAAGATTGCATTTCCATTTTCTTCAAGACGTCCTGCTCCTTGCTCTTAACATCACAACTGTTGCATTAGTATTTTTTGTTATTCTTAAGTAGCTTCTTTGAATATGGAAATATGTGTTCAAACTATTGTAATGAATAACGTGGACTTGTTTGTACATAACTTCTGTAGGTCAAAGCCAAGAATCAAACATTTTCCTCCTTTGATGATTTGCTGGCCAACTCTGACAAACCTGTGTTAGTCGACTTCTATGCTACCTGGTCAGTTACTCTCTCTCTCGCTCTTACATGCATGCACGCGTCACGTACCTATGTTCAAAGCACTCTTTCTAGAAGAGCATTGCAGGCGTGACATGATATCTCATCACACTTTATTCGCACAATGTTATATGTGGAGTCACTTTGTGTCTAATAGATCTATTAGACACTTTTCTAAGTTTAGGAACCTAACTTATAATTTAATCTAAAATTTAAAATTTGCAGACTAGTTTGGTTGGTTTAGTCAATTGTGTCAATTCTGGCCTCAATTTGGATTGAAATGTGCCAATTGAATCTGCTTATTTGCACATTGCCTCACCAAAGGGGTTATGTCCTTTACATTTTTTAGCTCATTTCTGTTTAGAAATTCAGCATTGTAAATGATTTGAAGCACATATTGTTTATGTTTGATTATATACTTAAAAGATATCTCAACAATGTCTAATTTCATATTTAAAAGTTTTTTTTTATACATGCTTGTTGAAGCGTTCTTGGATGTTTGTCCAAGATTTGAGTTGCACCACACCTATTTTTAAAGTACTCCTAGAAAAGCATTGCACGCGTGGTATGATACCCATCATACTTTCTTCACACAATGGTAATCCGTGGAGACATTTTTAATCTACTCTTTCAAGACAAGCCATTGTTACTCGGGAGCAATTTTACCATGTGAATATGATTCAATGGGCGAGTTAGTGCTTGAAGGTTGTGGAGAAAATGAGTCAGCAGGGGTTTAATTGTAGAATGGAGTATTTCCTTTTAGAAAAAAGTAATGTAACGTTTTTAAATGATGAGTAAACCTAGCTCCTCAATTGCAGGTGTGGTCCTTGTCAGTTCATGGTTCCCATTCTTGAACAAGTTAGTGCTACACTGAGTGACACAGTCCAGGTGGTCAAGATTGACACAGAGAAATATCCTGTCATTGCTGATAAATACAGAATAGAGGCATTGCCTACATTCATCCTCTTCAAAGATGGAAAACCCCTTGATCGATTCGTAAGTAAAAGCCTTGTCTCATTTCTAGTCATTTGGAGATATATCGAATGTACAACTTATTGTAAGCTTTGTTCAGTCAAATGCGTGAAGATATCTCATATATGATATATGTTTCAGAATCTTATTTAGTTACAATTTTTGTCTTTTCTGAAGTTGAATGAAAATGGGAAGTTTAACCAATTAGTTGTGTCAAGAAAATCTGTAATTACGTTAACAGTTGAAGTTTTTATAAAGATATATCCTTTATTGCCATTAAACCATTGTCTACTGTATCTTTACTCTATTCGTGCAGCCAGTTTAATTTCAAAGAGTTAAAGGTATTCCCATATTTTCAATGTTTAACCCTTTAAAACACATTAGCACATCCTCTTTCCTACTAGACTACAACTATTTTGCCTTTTCTTTTCGTTTTAGTGAGATCTCATAAACAATCTTTAACTTTTTAGACATTCCTGTTGAAATGTCAGTTAATCGCACTTTCAGTTTATTTTGCTTCGATTATTAATTATTTATTTTAAACATGCATGCAAATGATAAATGTAGGAAGGAGCTTTGACTGCGGTTGAACTCGTCAAACGCATTGAAGATTCCCTGAAGGTCAAGCAATAACACTGGTGAGACTCTTACTTTGATTGAAGAATTTATCTGAACTTGCATGTTTAGAAGATTTAAGAGCCCATATCAAATCAACAGAAAATTCAACCTCAGTTTGGAGGCAAACTTGGTATTACTAAAAAACCAGCTCAAACCAAAATGGAAGAAAGACAAGGGAAAAGAAGGCAAGCCTCTTATAGACATTTTATAGTTTTAATCTGTCAGAAAGGCATCAAGAAAATTGCACACTGTAACCATCTCTTCAATTCTCATTTTATGGTGTGTTTATAACACTACCATATCCCCAACTGCTATTTTCAATAAACTTAGTGGCTTTATAGAAAATAATGCACTTGCAAATAATATTTGGGATTTATAAGTGCACATCTGTTGGTATTAATTTTGGCATAAATTTGATATCGAAAATTGACCATGTGGTTTTGGTTAGTTGAAAACTGACAGTTTCTTAAGCTTGTACAATCGATTGATCATCTTTTGCTTCAATTGGTTGATTTTGGC

mRNA sequence

ATGGCGGCATCCATTTCAACTTCGGCTTATCCTCTCCTCACCTCAGAGCGCTCCAACCGCTTGGTTGCTAATGATTCATCTTTGTCGAGGTTGTCGTCCACCTCGTCTCTACAGCTACCAGTTCAGCTTCGGTGCGTTCGACTCGGAAACAATGGGGTTTCAGCTCCGTCGCGGTCTCGAATCTTGCCTGTGGTCAAAGCCAAGAATCAAACATTTTCCTCCTTTGATGATTTGCTGGCCAACTCTGACAAACCTGTGTTAGTCGACTTCTATGCTACCTGGTGTGGTCCTTGTCAGTTCATGGTTCCCATTCTTGAACAAGTTAGTGCTACACTGAGTGACACAGTCCAGGTGGTCAAGATTGACACAGAGAAATATCCTGTCATTGCTGATAAATACAGAATAGAGGCATTGCCTACATTCATCCTCTTCAAAGATGGAAAACCCCTTGATCGATTCGAAGGAGCTTTGACTGCGGTTGAACTCGTCAAACGCATTGAAGATTCCCTGAAGGTCAAGCAATAA

Coding sequence (CDS)

ATGGCGGCATCCATTTCAACTTCGGCTTATCCTCTCCTCACCTCAGAGCGCTCCAACCGCTTGGTTGCTAATGATTCATCTTTGTCGAGGTTGTCGTCCACCTCGTCTCTACAGCTACCAGTTCAGCTTCGGTGCGTTCGACTCGGAAACAATGGGGTTTCAGCTCCGTCGCGGTCTCGAATCTTGCCTGTGGTCAAAGCCAAGAATCAAACATTTTCCTCCTTTGATGATTTGCTGGCCAACTCTGACAAACCTGTGTTAGTCGACTTCTATGCTACCTGGTGTGGTCCTTGTCAGTTCATGGTTCCCATTCTTGAACAAGTTAGTGCTACACTGAGTGACACAGTCCAGGTGGTCAAGATTGACACAGAGAAATATCCTGTCATTGCTGATAAATACAGAATAGAGGCATTGCCTACATTCATCCTCTTCAAAGATGGAAAACCCCTTGATCGATTCGAAGGAGCTTTGACTGCGGTTGAACTCGTCAAACGCATTGAAGATTCCCTGAAGGTCAAGCAATAA

Protein sequence

MAASISTSAYPLLTSERSNRLVANDSSLSRLSSTSSLQLPVQLRCVRLGNNGVSAPSRSRILPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEQVSATLSDTVQVVKIDTEKYPVIADKYRIEALPTFILFKDGKPLDRFEGALTAVELVKRIEDSLKVKQ

Homology

[Close]

BLAST of Spg004499 vs. NCBI nr
Match: XP_022974037.1 (thioredoxin Y1, chloroplastic-like [Cucurbita maxima] >XP_022974038.1 thioredoxin Y1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 301.6 bits (771), Expect = 4.4e-78
Identity = 156/174 (89.66%), Postives = 163/174 (93.68%), Query Frame = 0


Query: 1   MAASISTSAYPLLTSERSNRLVANDSSLSRLSSTSSLQLPVQLRCVRLGNNGVSAPSRSR 60
           MAASISTS YPLLTSERSNR  ANDSS SRL S+SSLQLPVQLRCVRLGN G+SAPSRSR
Sbjct: 1   MAASISTSPYPLLTSERSNRFAANDSSSSRLFSSSSLQLPVQLRCVRLGNCGISAPSRSR 60

Query: 61  ILPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEQVSATLSDTVQVVK 120
           I PVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILE+VS  LSDTVQVVK
Sbjct: 61  IFPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEKVSDALSDTVQVVK 120

Query: 121 IDTEKYPVIADKYRIEALPTFILFKDGKPLDRFEGALTAVELVKRIEDSLKVKQ 175
           IDTEKYPVIADKY+IEALPTFILFKDGKPLDRFEGAL A EL++RIE+SLKVKQ
Sbjct: 121 IDTEKYPVIADKYKIEALPTFILFKDGKPLDRFEGALAAGELIQRIENSLKVKQ 174

[Close]

BLAST of Spg004499 vs. NCBI nr
Match: XP_022972902.1 (uncharacterized protein LOC111471411 [Cucurbita maxima])

HSP 1 Score: 298.5 bits (763), Expect = 3.7e-77
Identity = 154/174 (88.51%), Postives = 164/174 (94.25%), Query Frame = 0


Query: 1   MAASISTSAYPLLTSERSNRLVANDSSLSRLSSTSSLQLPVQLRCVRLGNNGVSAPSRSR 60
           MAASISTSA PLLTSER NRL AN +SLSRLSSTSS+QLPVQLRCVRLGN+GVS  SRSR
Sbjct: 1   MAASISTSANPLLTSERPNRLAANVTSLSRLSSTSSIQLPVQLRCVRLGNHGVSTLSRSR 60

Query: 61  ILPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEQVSATLSDTVQVVK 120
           ILPV+KA NQTFSSFDDLLANS KPVLVDFYATWCGPCQFMVPILE+VSA LSDTVQVVK
Sbjct: 61  ILPVIKASNQTFSSFDDLLANSGKPVLVDFYATWCGPCQFMVPILEKVSAKLSDTVQVVK 120

Query: 121 IDTEKYPVIADKYRIEALPTFILFKDGKPLDRFEGALTAVELVKRIEDSLKVKQ 175
           IDTEKYPVIADKY+IEALPTF+LFKDGKPLDRFEGA+TA +L+KRIEDSLKVKQ
Sbjct: 121 IDTEKYPVIADKYKIEALPTFVLFKDGKPLDRFEGAMTADDLIKRIEDSLKVKQ 174

[Close]

BLAST of Spg004499 vs. NCBI nr
Match: XP_023520827.1 (uncharacterized protein LOC111784322 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023520828.1 uncharacterized protein LOC111784322 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023520939.1 uncharacterized protein LOC111784479 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 297.4 bits (760), Expect = 8.3e-77
Identity = 155/174 (89.08%), Postives = 161/174 (92.53%), Query Frame = 0


Query: 1   MAASISTSAYPLLTSERSNRLVANDSSLSRLSSTSSLQLPVQLRCVRLGNNGVSAPSRSR 60
           MAASISTS YPLLTSERSNR   NDSS SRL S+SSLQLPVQLRCVRLGN G+SA SRSR
Sbjct: 1   MAASISTSPYPLLTSERSNRFAVNDSSSSRLFSSSSLQLPVQLRCVRLGNCGISAQSRSR 60

Query: 61  ILPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEQVSATLSDTVQVVK 120
           I PVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILE+VS  LSDTVQVVK
Sbjct: 61  IFPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEKVSDALSDTVQVVK 120

Query: 121 IDTEKYPVIADKYRIEALPTFILFKDGKPLDRFEGALTAVELVKRIEDSLKVKQ 175
           IDTEKYPVIADKY+IEALPTFILFKDGKPLDRFEGAL A ELV+RIE+SLKVKQ
Sbjct: 121 IDTEKYPVIADKYKIEALPTFILFKDGKPLDRFEGALAAGELVQRIENSLKVKQ 174

[Close]

BLAST of Spg004499 vs. NCBI nr
Match: XP_022932802.1 (thioredoxin Y2, chloroplastic [Cucurbita moschata])

HSP 1 Score: 296.2 bits (757), Expect = 1.8e-76
Identity = 152/174 (87.36%), Postives = 161/174 (92.53%), Query Frame = 0


Query: 1   MAASISTSAYPLLTSERSNRLVANDSSLSRLSSTSSLQLPVQLRCVRLGNNGVSAPSRSR 60
           MAASISTS YPLLTSERSNR   NDSS SRL  +SSLQLPVQLRCVRLGN G+SAPSRSR
Sbjct: 1   MAASISTSPYPLLTSERSNRFAVNDSSSSRLFFSSSLQLPVQLRCVRLGNCGISAPSRSR 60

Query: 61  ILPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEQVSATLSDTVQVVK 120
           I PVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILE+VS  LSDTVQVVK
Sbjct: 61  IFPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEKVSDALSDTVQVVK 120

Query: 121 IDTEKYPVIADKYRIEALPTFILFKDGKPLDRFEGALTAVELVKRIEDSLKVKQ 175
           IDTEKYPVIADKY+IEALPTFILFKDGKPLDRFEGA+ A EL++RIE+SLK+KQ
Sbjct: 121 IDTEKYPVIADKYKIEALPTFILFKDGKPLDRFEGAVAAGELIQRIENSLKIKQ 174

[Close]

BLAST of Spg004499 vs. NCBI nr
Match: XP_022932509.1 (uncharacterized protein LOC111438908 [Cucurbita moschata] >KAG6607564.1 Thioredoxin Y1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037199.1 Thioredoxin Y1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 294.3 bits (752), Expect = 7.0e-76
Identity = 154/174 (88.51%), Postives = 162/174 (93.10%), Query Frame = 0


Query: 1   MAASISTSAYPLLTSERSNRLVANDSSLSRLSSTSSLQLPVQLRCVRLGNNGVSAPSRSR 60
           MAASISTSA PLLTSER N L AN +SLSRLSSTSS+QLPVQLRCVRLGN+GVS  SRSR
Sbjct: 1   MAASISTSANPLLTSERPNLLAANVTSLSRLSSTSSIQLPVQLRCVRLGNHGVSTLSRSR 60

Query: 61  ILPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEQVSATLSDTVQVVK 120
           ILPVVKA NQTFSSFDDLLANS KPVLVDFYATWCGPCQFMVPILE+VSA LSDTVQVVK
Sbjct: 61  ILPVVKASNQTFSSFDDLLANSGKPVLVDFYATWCGPCQFMVPILEKVSAKLSDTVQVVK 120

Query: 121 IDTEKYPVIADKYRIEALPTFILFKDGKPLDRFEGALTAVELVKRIEDSLKVKQ 175
           IDTEKYPVIADKY+IEALPTFILFKDGKP DRFEGA+TA +L+KRIEDSLKVKQ
Sbjct: 121 IDTEKYPVIADKYKIEALPTFILFKDGKPRDRFEGAMTADDLIKRIEDSLKVKQ 174

[Close]

BLAST of Spg004499 vs. ExPASy Swiss-Prot
Match: Q6NPF9 (Thioredoxin Y1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g76760 PE=1 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 3.8e-48
Identity = 109/172 (63.37%), Postives = 128/172 (74.42%), Query Frame = 0


Query: 4   SISTSAYPLLTSERSNRLVANDSSLSRLSSTSSLQLPVQLRCVRLGN-NGVSAPSRSRIL 63
           S+S+S  P L S+ S+ + A     SR  S    Q PV  R VR G+    S  S +R  
Sbjct: 5   SLSSSTVPSLNSKESSGVSA---FASRSISAVKFQFPV--RRVRTGDLKFPSLSSTTRCT 64

Query: 64  P-VVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEQVSATLSDTVQVVKI 123
           P  ++AK QTF SF+DLL NSDKPVLVD+YATWCGPCQFMVPIL +VS TL D +QVVKI
Sbjct: 65  PRRIEAKKQTFDSFEDLLVNSDKPVLVDYYATWCGPCQFMVPILNEVSETLKDKIQVVKI 124

Query: 124 DTEKYPVIADKYRIEALPTFILFKDGKPLDRFEGALTAVELVKRIEDSLKVK 174
           DTEKYP IA+KY+IEALPTFILFKDG+P DRFEGALTA +L++RIEDSLKVK
Sbjct: 125 DTEKYPSIANKYKIEALPTFILFKDGEPCDRFEGALTAKQLIQRIEDSLKVK 171

[Close]

BLAST of Spg004499 vs. ExPASy Swiss-Prot
Match: Q8L7S9 (Thioredoxin Y2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g43560 PE=2 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 7.9e-46
Identity = 108/176 (61.36%), Postives = 128/176 (72.73%), Query Frame = 0


Query: 1   MAASISTS-AYPLLTSERSNRLVANDSSLSRLSSTSSLQLPVQLRCVRLGN-NGVSAPSR 60
           MA S++T+   P  T E SN       S S   + SS++LP Q+R  R G+    S+ +R
Sbjct: 1   MAISLATAYISPCFTPESSN-------SASPSRTLSSVRLPSQIR--RFGSVQSPSSSTR 60

Query: 61  SRILPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEQVSATLSDTVQV 120
              L V  AK QTF+SFDDLL NSDKPVLVDFYATWCGPCQ MVPIL +VS TL D + V
Sbjct: 61  FAPLTVRAAKKQTFNSFDDLLQNSDKPVLVDFYATWCGPCQLMVPILNEVSETLKDIIAV 120

Query: 121 VKIDTEKYPVIADKYRIEALPTFILFKDGKPLDRFEGALTAVELVKRIEDSLKVKQ 175
           VKIDTEKYP +A+KY+IEALPTFILFKDGK  DRFEGAL A +LV+RIE+SL+VKQ
Sbjct: 121 VKIDTEKYPSLANKYQIEALPTFILFKDGKLWDRFEGALPANQLVERIENSLQVKQ 167

[Close]

BLAST of Spg004499 vs. ExPASy Swiss-Prot
Match: Q5JMR9 (Thioredoxin Y, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0963400 PE=3 SV=2)

HSP 1 Score: 164.9 bits (416), Expect = 8.4e-40
Identity = 94/169 (55.62%), Postives = 117/169 (69.23%), Query Frame = 0


Query: 4   SISTSAYPLLTSERSNRLVANDSSLSRLSSTSSLQLPVQLRCVRLGNNGVSAPSRSRILP 63
           S +T+A    T  R   LVA  S+    S+      PV    V  G    +APSR     
Sbjct: 6   STTTAAAASPTPCRPAALVARSSAAPLRSAA-----PV---VVAAGLRRAAAPSRRGATL 65

Query: 64  VVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEQVSATLSDTVQVVKIDT 123
            V+AK QTFSSFD+LL  S+KPVLVDFYATWCGPCQ+MVPIL++VS  L D +QVVKIDT
Sbjct: 66  RVQAKKQTFSSFDELLEKSEKPVLVDFYATWCGPCQYMVPILQEVSEKLGDKIQVVKIDT 125

Query: 124 EKYPVIADKYRIEALPTFILFKDGKPLDRFEGALTAVELVKRIEDSLKV 173
           EKY  IA++Y+IEALPTFI+FK+GKP  RFEGAL A +L+++IE +L+V
Sbjct: 126 EKYTSIANRYQIEALPTFIIFKNGKPCHRFEGALPANQLIQQIESALEV 166

[Close]

BLAST of Spg004499 vs. ExPASy Swiss-Prot
Match: P52232 (Thioredoxin-like protein slr0233 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr0233 PE=1 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 3.9e-29
Identity = 57/101 (56.44%), Postives = 78/101 (77.23%), Query Frame = 0


Query: 67  AKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEQVSATLSDTVQVVKIDTEKY 126
           A  + F++F ++LA S KPVLVDFYATWCGPCQ M PILEQV + L   +QVVKIDT+KY
Sbjct: 2   AVKKQFANFAEMLAGSPKPVLVDFYATWCGPCQMMAPILEQVGSHLRQQIQVVKIDTDKY 61

Query: 127 PVIADKYRIEALPTFILFKDGKPLDRFEGALTAVELVKRIE 168
           P IA +Y+I++LPT +LFK G+P+ R EG   A +L+++++
Sbjct: 62  PAIATQYQIQSLPTLVLFKQGQPVHRMEGVQQAAQLIQQLQ 102

[Close]

BLAST of Spg004499 vs. ExPASy Swiss-Prot
Match: O30974 (Thioredoxin OS=Mycolicibacterium smegmatis OX=1772 GN=trxA PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.1e-18
Identity = 44/102 (43.14%), Postives = 64/102 (62.75%), Query Frame = 0


Query: 71  TFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEQVSATLSDTVQVVKI--DTEKYPV 130
           T  SF   +  S KPVLVDF+ATWCGPC+ + P+LE+++A   D + V KI  D +  P 
Sbjct: 11  TDDSFSTDVLGSSKPVLVDFWATWCGPCKMVAPVLEEIAAEKGDQLTVAKIDVDVDANPA 70

Query: 131 IADKYRIEALPTFILFKDGKPLDRFEGALTAVELVKRIEDSL 171
            A  +++ ++PT ILFKDG P+ R  GA     L++ + D+L
Sbjct: 71  TARDFQVVSIPTMILFKDGAPVKRIVGAKGKAALLRELSDAL 112

[Close]

BLAST of Spg004499 vs. ExPASy TrEMBL
Match: A0A6J1I964 (thioredoxin Y1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111472651 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 2.1e-78
Identity = 156/174 (89.66%), Postives = 163/174 (93.68%), Query Frame = 0


Query: 1   MAASISTSAYPLLTSERSNRLVANDSSLSRLSSTSSLQLPVQLRCVRLGNNGVSAPSRSR 60
           MAASISTS YPLLTSERSNR  ANDSS SRL S+SSLQLPVQLRCVRLGN G+SAPSRSR
Sbjct: 1   MAASISTSPYPLLTSERSNRFAANDSSSSRLFSSSSLQLPVQLRCVRLGNCGISAPSRSR 60

Query: 61  ILPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEQVSATLSDTVQVVK 120
           I PVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILE+VS  LSDTVQVVK
Sbjct: 61  IFPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEKVSDALSDTVQVVK 120

Query: 121 IDTEKYPVIADKYRIEALPTFILFKDGKPLDRFEGALTAVELVKRIEDSLKVKQ 175
           IDTEKYPVIADKY+IEALPTFILFKDGKPLDRFEGAL A EL++RIE+SLKVKQ
Sbjct: 121 IDTEKYPVIADKYKIEALPTFILFKDGKPLDRFEGALAAGELIQRIENSLKVKQ 174

[Close]

BLAST of Spg004499 vs. ExPASy TrEMBL
Match: A0A6J1I628 (uncharacterized protein LOC111471411 OS=Cucurbita maxima OX=3661 GN=LOC111471411 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 1.8e-77
Identity = 154/174 (88.51%), Postives = 164/174 (94.25%), Query Frame = 0


Query: 1   MAASISTSAYPLLTSERSNRLVANDSSLSRLSSTSSLQLPVQLRCVRLGNNGVSAPSRSR 60
           MAASISTSA PLLTSER NRL AN +SLSRLSSTSS+QLPVQLRCVRLGN+GVS  SRSR
Sbjct: 1   MAASISTSANPLLTSERPNRLAANVTSLSRLSSTSSIQLPVQLRCVRLGNHGVSTLSRSR 60

Query: 61  ILPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEQVSATLSDTVQVVK 120
           ILPV+KA NQTFSSFDDLLANS KPVLVDFYATWCGPCQFMVPILE+VSA LSDTVQVVK
Sbjct: 61  ILPVIKASNQTFSSFDDLLANSGKPVLVDFYATWCGPCQFMVPILEKVSAKLSDTVQVVK 120

Query: 121 IDTEKYPVIADKYRIEALPTFILFKDGKPLDRFEGALTAVELVKRIEDSLKVKQ 175
           IDTEKYPVIADKY+IEALPTF+LFKDGKPLDRFEGA+TA +L+KRIEDSLKVKQ
Sbjct: 121 IDTEKYPVIADKYKIEALPTFVLFKDGKPLDRFEGAMTADDLIKRIEDSLKVKQ 174

[Close]

BLAST of Spg004499 vs. ExPASy TrEMBL
Match: A0A6J1EXS8 (thioredoxin Y2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111439262 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 8.9e-77
Identity = 152/174 (87.36%), Postives = 161/174 (92.53%), Query Frame = 0


Query: 1   MAASISTSAYPLLTSERSNRLVANDSSLSRLSSTSSLQLPVQLRCVRLGNNGVSAPSRSR 60
           MAASISTS YPLLTSERSNR   NDSS SRL  +SSLQLPVQLRCVRLGN G+SAPSRSR
Sbjct: 1   MAASISTSPYPLLTSERSNRFAVNDSSSSRLFFSSSLQLPVQLRCVRLGNCGISAPSRSR 60

Query: 61  ILPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEQVSATLSDTVQVVK 120
           I PVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILE+VS  LSDTVQVVK
Sbjct: 61  IFPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEKVSDALSDTVQVVK 120

Query: 121 IDTEKYPVIADKYRIEALPTFILFKDGKPLDRFEGALTAVELVKRIEDSLKVKQ 175
           IDTEKYPVIADKY+IEALPTFILFKDGKPLDRFEGA+ A EL++RIE+SLK+KQ
Sbjct: 121 IDTEKYPVIADKYKIEALPTFILFKDGKPLDRFEGAVAAGELIQRIENSLKIKQ 174

[Close]

BLAST of Spg004499 vs. ExPASy TrEMBL
Match: A0A6J1EX66 (uncharacterized protein LOC111438908 OS=Cucurbita moschata OX=3662 GN=LOC111438908 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 3.4e-76
Identity = 154/174 (88.51%), Postives = 162/174 (93.10%), Query Frame = 0


Query: 1   MAASISTSAYPLLTSERSNRLVANDSSLSRLSSTSSLQLPVQLRCVRLGNNGVSAPSRSR 60
           MAASISTSA PLLTSER N L AN +SLSRLSSTSS+QLPVQLRCVRLGN+GVS  SRSR
Sbjct: 1   MAASISTSANPLLTSERPNLLAANVTSLSRLSSTSSIQLPVQLRCVRLGNHGVSTLSRSR 60

Query: 61  ILPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEQVSATLSDTVQVVK 120
           ILPVVKA NQTFSSFDDLLANS KPVLVDFYATWCGPCQFMVPILE+VSA LSDTVQVVK
Sbjct: 61  ILPVVKASNQTFSSFDDLLANSGKPVLVDFYATWCGPCQFMVPILEKVSAKLSDTVQVVK 120

Query: 121 IDTEKYPVIADKYRIEALPTFILFKDGKPLDRFEGALTAVELVKRIEDSLKVKQ 175
           IDTEKYPVIADKY+IEALPTFILFKDGKP DRFEGA+TA +L+KRIEDSLKVKQ
Sbjct: 121 IDTEKYPVIADKYKIEALPTFILFKDGKPRDRFEGAMTADDLIKRIEDSLKVKQ 174

[Close]

BLAST of Spg004499 vs. ExPASy TrEMBL
Match: A0A6J1DH52 (thioredoxin Y2, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111020017 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 9.9e-76
Identity = 153/175 (87.43%), Postives = 160/175 (91.43%), Query Frame = 0


Query: 1   MAASISTSAYPLLTSERSNRLVAND-SSLSRLSSTSSLQLPVQLRCVRLGNNGVSAPSRS 60
           MAASISTS YPLLTSERSNR  AND SS SR SS+SSL LP Q RC RLGNNG+SAPSRS
Sbjct: 1   MAASISTSPYPLLTSERSNRFPANDSSSSSRFSSSSSLHLPPQFRCFRLGNNGISAPSRS 60

Query: 61  RILPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEQVSATLSDTVQVV 120
           RILPVVKAKNQTFSSFDDLLANSDKPV VDFYATWCGPCQFMVPILE+VSATL DTVQVV
Sbjct: 61  RILPVVKAKNQTFSSFDDLLANSDKPVFVDFYATWCGPCQFMVPILEKVSATLGDTVQVV 120

Query: 121 KIDTEKYPVIADKYRIEALPTFILFKDGKPLDRFEGALTAVELVKRIEDSLKVKQ 175
           KIDTEKYP IADKY+IEALPTFILFKDGK LDRFEGALTA +L++RIEDSLKVKQ
Sbjct: 121 KIDTEKYPAIADKYKIEALPTFILFKDGKLLDRFEGALTARDLIQRIEDSLKVKQ 175

[Close]

BLAST of Spg004499 vs. TAIR 10
Match: AT1G76760.1 (thioredoxin Y1 )

HSP 1 Score: 192.6 bits (488), Expect = 2.7e-49
Identity = 109/172 (63.37%), Postives = 128/172 (74.42%), Query Frame = 0


Query: 4   SISTSAYPLLTSERSNRLVANDSSLSRLSSTSSLQLPVQLRCVRLGN-NGVSAPSRSRIL 63
           S+S+S  P L S+ S+ + A     SR  S    Q PV  R VR G+    S  S +R  
Sbjct: 5   SLSSSTVPSLNSKESSGVSA---FASRSISAVKFQFPV--RRVRTGDLKFPSLSSTTRCT 64

Query: 64  P-VVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEQVSATLSDTVQVVKI 123
           P  ++AK QTF SF+DLL NSDKPVLVD+YATWCGPCQFMVPIL +VS TL D +QVVKI
Sbjct: 65  PRRIEAKKQTFDSFEDLLVNSDKPVLVDYYATWCGPCQFMVPILNEVSETLKDKIQVVKI 124

Query: 124 DTEKYPVIADKYRIEALPTFILFKDGKPLDRFEGALTAVELVKRIEDSLKVK 174
           DTEKYP IA+KY+IEALPTFILFKDG+P DRFEGALTA +L++RIEDSLKVK
Sbjct: 125 DTEKYPSIANKYKIEALPTFILFKDGEPCDRFEGALTAKQLIQRIEDSLKVK 171

[Close]

BLAST of Spg004499 vs. TAIR 10
Match: AT1G43560.1 (thioredoxin Y2 )

HSP 1 Score: 184.9 bits (468), Expect = 5.6e-47
Identity = 108/176 (61.36%), Postives = 128/176 (72.73%), Query Frame = 0


Query: 1   MAASISTS-AYPLLTSERSNRLVANDSSLSRLSSTSSLQLPVQLRCVRLGN-NGVSAPSR 60
           MA S++T+   P  T E SN       S S   + SS++LP Q+R  R G+    S+ +R
Sbjct: 1   MAISLATAYISPCFTPESSN-------SASPSRTLSSVRLPSQIR--RFGSVQSPSSSTR 60

Query: 61  SRILPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEQVSATLSDTVQV 120
              L V  AK QTF+SFDDLL NSDKPVLVDFYATWCGPCQ MVPIL +VS TL D + V
Sbjct: 61  FAPLTVRAAKKQTFNSFDDLLQNSDKPVLVDFYATWCGPCQLMVPILNEVSETLKDIIAV 120

Query: 121 VKIDTEKYPVIADKYRIEALPTFILFKDGKPLDRFEGALTAVELVKRIEDSLKVKQ 175
           VKIDTEKYP +A+KY+IEALPTFILFKDGK  DRFEGAL A +LV+RIE+SL+VKQ
Sbjct: 121 VKIDTEKYPSLANKYQIEALPTFILFKDGKLWDRFEGALPANQLVERIENSLQVKQ 167

[Close]

BLAST of Spg004499 vs. TAIR 10
Match: AT1G50320.1 (thioredoxin X )

HSP 1 Score: 86.7 bits (213), Expect = 2.1e-17
Identity = 43/100 (43.00%), Postives = 62/100 (62.00%), Query Frame = 0


Query: 73  SSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEQVSATLSDTVQVVKIDTEKYPVIADK 132
           S F   +  S +PVLV+F ATWCGPC+ + P +E +S    D + +VKID +  P +  +
Sbjct: 77  SEFSSTVLESAQPVLVEFVATWCGPCKLIYPAMEALSQEYGDKLTIVKIDHDANPKLIAE 136

Query: 133 YRIEALPTFILFKDGK--PLDRFEGALTAVELVKRIEDSL 171
           +++  LP FILFKDGK  P  R EGA+T  +L + I+  L
Sbjct: 137 FKVYGLPHFILFKDGKEVPGSRREGAITKAKLKEYIDGLL 176

[Close]

BLAST of Spg004499 vs. TAIR 10
Match: AT3G15360.1 (thioredoxin M-type 4 )

HSP 1 Score: 81.3 bits (199), Expect = 8.7e-16
Identity = 55/173 (31.79%), Postives = 94/173 (54.34%), Query Frame = 0


Query: 1   MAASI-STSAYPLLTSERSN-----RLVANDSSLSRLSSTSSLQLPVQLRCVRLGNNGVS 60
           +AAS+ S+SA P ++  R +           SS S ++ ++SL    + R  R G   ++
Sbjct: 18  IAASVSSSSAAPSVSRRRISPARFLEFRGLKSSRSLVTQSASLGANRRTRIARGGR--IA 77

Query: 61  APSRSRILPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEQVSATLSD 120
             ++      V+  N + S +   +  SD PVLV+F+A WCGPC+ + PI++Q++   + 
Sbjct: 78  CEAQDTTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAG 137

Query: 121 TVQVVKIDTEKYPVIADKYRIEALPTFILFKDGKPLDRFEGALTAVELVKRIE 168
             +  KI+T++ P  A++Y I ++PT I+FK G+  D   GA+    L K IE
Sbjct: 138 KFKFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPRETLEKTIE 188

[Close]

BLAST of Spg004499 vs. TAIR 10
Match: AT4G03520.1 (Thioredoxin superfamily protein )

HSP 1 Score: 72.4 bits (176), Expect = 4.0e-13
Identity = 54/187 (28.88%), Postives = 94/187 (50.27%), Query Frame = 0


Query: 1   MAASISTSAYPL-LTSERSNRLVANDSSLSRLSS---------TSSLQLPVQLRCVRLGN 60
           MAA   TS  P+ L SE   R+V++  S S LSS         +S L++ + L    L +
Sbjct: 1   MAAFTCTSRPPISLRSE--TRIVSSSPSASSLSSRRMFAVLPESSGLRIRLSLSPASLTS 60

Query: 61  NGVSAPSRSRILPVVKAKNQTF-------SSFDDLLANSDKPVLVDFYATWCGPCQFMVP 120
                 SR R   V +A+  T        S++D L+  +  PV+VDF+A WCGPC+ + P
Sbjct: 61  IHQPRVSRLRRAVVCEAQETTTDIQVVNDSTWDSLVLKATGPVVVDFWAPWCGPCKMIDP 120

Query: 121 ILEQVSATLSDTVQVVKIDTEKYPVIADKYRIEALPTFILFKDGKPLDRFEGALTAVELV 171
           ++  ++   +  ++  K++T++ P    +Y + ++PT ++F  G+  D   GA+    L 
Sbjct: 121 LVNDLAQHYTGKIKFYKLNTDESPNTPGQYGVRSIPTIMIFVGGEKKDTIIGAVPKTTLT 180

The following BLAST results are available for this feature:

BLAST of Spg004499 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022974037.1	4.4e-78	89.66	thioredoxin Y1, chloroplastic-like [Cucurbita maxima] >XP_022974038.1 thioredoxi...	[more]
XP_022972902.1	3.7e-77	88.51	uncharacterized protein LOC111471411 [Cucurbita maxima]	[more]
XP_023520827.1	8.3e-77	89.08	uncharacterized protein LOC111784322 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_022932802.1	1.8e-76	87.36	thioredoxin Y2, chloroplastic [Cucurbita moschata]	[more]
XP_022932509.1	7.0e-76	88.51	uncharacterized protein LOC111438908 [Cucurbita moschata] >KAG6607564.1 Thioredo...	[more]

BLAST of Spg004499 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NPF9	3.8e-48	63.37	Thioredoxin Y1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g76760 PE=1 ...	[more]
Q8L7S9	7.9e-46	61.36	Thioredoxin Y2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g43560 PE=2 ...	[more]
Q5JMR9	8.4e-40	55.62	Thioredoxin Y, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g09...	[more]
P52232	3.9e-29	56.44	Thioredoxin-like protein slr0233 OS=Synechocystis sp. (strain PCC 6803 / Kazusa)...	[more]
O30974	3.1e-18	43.14	Thioredoxin OS=Mycolicibacterium smegmatis OX=1772 GN=trxA PE=1 SV=1	[more]

BLAST of Spg004499 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I964	2.1e-78	89.66	thioredoxin Y1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111472651 P...	[more]
A0A6J1I628	1.8e-77	88.51	uncharacterized protein LOC111471411 OS=Cucurbita maxima OX=3661 GN=LOC111471411...	[more]
A0A6J1EXS8	8.9e-77	87.36	thioredoxin Y2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111439262 PE=4...	[more]
A0A6J1EX66	3.4e-76	88.51	uncharacterized protein LOC111438908 OS=Cucurbita moschata OX=3662 GN=LOC1114389...	[more]
A0A6J1DH52	9.9e-76	87.43	thioredoxin Y2, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC11102001...	[more]

BLAST of Spg004499 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G76760.1	2.7e-49	63.37	thioredoxin Y1	[more]
AT1G43560.1	5.6e-47	61.36	thioredoxin Y2	[more]
AT1G50320.1	2.1e-17	43.00	thioredoxin X	[more]
AT3G15360.1	8.7e-16	31.79	thioredoxin M-type 4	[more]
AT4G03520.1	4.0e-13	28.88	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 134..145 score: 35.93 coord: 94..103 score: 55.39 coord: 86..94 score: 64.32
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 68..174 e-value: 1.6E-32 score: 113.7
None	No IPR available	PANTHER	PTHR45663:SF15	THIOREDOXIN Y1, CHLOROPLASTIC	coord: 3..173
None	No IPR available	PANTHER	PTHR45663	GEO12009P1	coord: 3..173
None	No IPR available	CDD	cd02947	TRX_family	coord: 73..167 e-value: 5.91467E-36 score: 118.43
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 70..167 e-value: 4.3E-29 score: 100.5
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 49..171 score: 16.519257
IPR005746	Thioredoxin	TIGRFAM	TIGR01068	TIGR01068	coord: 72..168 e-value: 5.7E-32 score: 107.9
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 87..105
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 71..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg004499.1	Spg004499.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006662	glycerol ether metabolic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
molecular_function	GO:0015035	protein-disulfide reductase activity