Spg004497 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg004497
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionkeratin, type II cytoskeletal 3 isoform X2
Locationscaffold9: 11311473 .. 11313473 (-)
RNA-Seq ExpressionSpg004497
SyntenySpg004497
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTTTTTTAAAAACAGCCTAAACATATTTGTTGACAAATGCATTTTAAAAAAAAAGACAAATTGTTTGTCAAGGCAGAAGTTCCCCTGGCAAAATGTCGCAAGTAAGAATGTAGTGGACTATCTATTGGGCAATTGATGTTGTTGATCAGTTAGACGAGGAATTTTGGAGACCTGTGCATCTTGTTCCTCTGCTTATTCGTCCCAAAACCCCGAGGAAGAAATGCCTCGAAATATGAACGGGAACAGACAGGAAGGCGGAGAAGATGAAAATGGAGTAATATGGAAGCTTCCAGTCCTGAAATCTTCCCGTATCGGAAAGCTAGGTCCCGCCTTCGGTCTGGGCGTTGGTTGTGGCGTCGGCTTTGGCATCGGCCTCGTCGGAGGTTACTTCTTCATCCTTTCTCTCTTTCCTTTTTTTTAGTCCTAATTAACTTGTTAATCCCCTGTTGGATTCATTTCAATTTTGTTGCTTAAATTCAATTAGATTAGCCGAATCAATTTGTTTAATGCGTAATAATCAACTCCTATGGTGGGGGGCTTAGCTTTTGGTGAATTGAAAATTTTGCCTCGTCGATTGTTCTGCCCTACAACTTGCTCTGATTGCTTTAGTTGGAAGTATTATTATTGAATTGGAGGGTGAGGTAGGTTAGGTGGGGTTATTCAGTCTGTAGTGCTAATTTGGTTTAGCCTGATAATCGTTTCACGATTATTTAATTCGTTTTTGTGCCTTCTACTGCCATTCCTTCTTCAGTATTTTGTGTTTCTTGCATTCCGGCTGAAAGAATATAGGGGGTTTGGATTGTATATTTATTGTTATGCCTCCTGCTGAAATTCTGTGGCCTTATGATTTTCCTCCCTAAGTTTAGTTAGCGTTTGACCTTGTTCTGAAGAAGCCGACAGATGGGCGCCATACAAGATCACAACATTTCTACTTCTCAAAAAGTTATGATGAAAAGATGCTTTGGTAAAATATGTTTCAACACATTGCAACTTATTGTGTATGGTAAAATATATAGAAGTTTAGACTTGGGAAAGGGAATGATATTTTCTAGGATGCAATATAATCCGAATATTACCAAAAGGAATATAGTGTACCACTAAGCAAATAACAAAATTTCCTTCAAAATAGCTCAAATATGAATCCCCAAATAGGCTCAGATGTAATACAATTCTGGTTGGTATCTTTTCTTTATCTTTATGATCTTCTTCTTCTTCTTCTTCTTCTTCTGTTTTTGTTTGTTTTTCTTCATTTGTTTCTTCTGTTTTATTTAGACTATCTGTAGTGAACTATATGTTTGTTTACGTGATTGTAATCAACATGAAAAGCTGTTACCATCTCAATTTTGGAGTGTACAAGCGTTACTCGGCTGCATGTTTTAAGTTCCATCAATCTTTTTAGTAGGATTTTCGGGGACCAAAAGCTCAAAATATACTAAGCTTTAAAAACGAAGTACTTTCTATGTTGATGGGGAATTAATTCTCTCAATCCTTTGTGATAGTATGTTTTTAGTCTATAAGAAACAACGTTGATTTTCCTTTTGGTAATAGACTTTATATTAATGAGAAAAAAGAGAACACGAGGAGTTGGGAAGACAAATCATTCTTTGTGTCTCCCATATGCACGTCCATACACACTTAAAAGAAGAAGAAGAAGAAGCTATAATGGATTTTGAGTTTTTATAGAAGGTAGGGCTTAAGTTTCAACTAATAAATATTATCACCATGCAAATTTTATTTTGAACTTTACACTGTAGTGAACCATCCTTGTTTTATTAAACTACTTAAATAGATGTATTCGTAAACATTGTTCTCCACTCTAGGTGCTGGATTTGGTCCGGGAATTCCTGGCTTACAACTTGGCTTTGGTCTTGGTGCTGGATGTGGAGTTGGCTTAGGATTTGGTTATGGTGTTGGCAGGGGCATTGCCCAAGATGAAAAACGGAGATACTCTAATGTTGGGGATCTATTACATGGTCATCAAAGTATTTTTCCTCAGTAA

mRNA sequence

ATGCCTCGAAATATGAACGGGAACAGACAGGAAGGCGGAGAAGATGAAAATGGAGTAATATGGAAGCTTCCAGTCCTGAAATCTTCCCGTATCGGAAAGCTAGGTCCCGCCTTCGGTCTGGGCGTTGGTTGTGGCGTCGGCTTTGGCATCGGCCTCGTCGGAGGTGCTGGATTTGGTCCGGGAATTCCTGGCTTACAACTTGGCTTTGGTCTTGGTGCTGGATGTGGAGTTGGCTTAGGATTTGGTTATGGTGTTGGCAGGGGCATTGCCCAAGATGAAAAACGGAGATACTCTAATGTTGGGGATCTATTACATGGTCATCAAAGTATTTTTCCTCAGTAA

Coding sequence (CDS)

ATGCCTCGAAATATGAACGGGAACAGACAGGAAGGCGGAGAAGATGAAAATGGAGTAATATGGAAGCTTCCAGTCCTGAAATCTTCCCGTATCGGAAAGCTAGGTCCCGCCTTCGGTCTGGGCGTTGGTTGTGGCGTCGGCTTTGGCATCGGCCTCGTCGGAGGTGCTGGATTTGGTCCGGGAATTCCTGGCTTACAACTTGGCTTTGGTCTTGGTGCTGGATGTGGAGTTGGCTTAGGATTTGGTTATGGTGTTGGCAGGGGCATTGCCCAAGATGAAAAACGGAGATACTCTAATGTTGGGGATCTATTACATGGTCATCAAAGTATTTTTCCTCAGTAA

Protein sequence

MPRNMNGNRQEGGEDENGVIWKLPVLKSSRIGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDEKRRYSNVGDLLHGHQSIFPQ
Homology
[Close]
BLAST of Spg004497 vs. NCBI nr
Match: XP_038889093.1 (ctenidin-1 isoform X1 [Benincasa hispida])

HSP 1 Score: 214.9 bits (546), Expect = 3.5e-52
Identity = 104/113 (92.04%), Postives = 108/113 (95.58%), Query Frame = 0 

Query: 1   MPRNMNGNRQEGGEDENGVIWKLPVLKSSRIGKLGPAFGLGVGCGVGFGIGLVGGAGFGP 60
           MPRN NGNR +GGEDE G++W LPVLKSSR GKLGPAFGLGVGCGVGFGIGLVGGAGFGP
Sbjct: 1   MPRNTNGNRHQGGEDEGGLLWNLPVLKSSRFGKLGPAFGLGVGCGVGFGIGLVGGAGFGP 60

Query: 61  GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDEKRRYSNVGDLLHGHQSIFPQ 114
           GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQD+KRRYSNVGDLLHGHQSIFPQ
Sbjct: 61  GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLHGHQSIFPQ 113

[Close]
BLAST of Spg004497 vs. NCBI nr
Match: XP_038889094.1 (glycine-rich cell wall structural protein 1 isoform X2 [Benincasa hispida])

HSP 1 Score: 214.9 bits (546), Expect = 3.5e-52
Identity = 104/113 (92.04%), Postives = 108/113 (95.58%), Query Frame = 0 

Query: 1   MPRNMNGNRQEGGEDENGVIWKLPVLKSSRIGKLGPAFGLGVGCGVGFGIGLVGGAGFGP 60
           MPRN NGNR +GGEDE G++W LPVLKSSR GKLGPAFGLGVGCGVGFGIGLVGGAGFGP
Sbjct: 1   MPRNTNGNRHQGGEDEGGLLWNLPVLKSSRFGKLGPAFGLGVGCGVGFGIGLVGGAGFGP 60

Query: 61  GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDEKRRYSNVGDLLHGHQSIFPQ 114
           GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQD+KRRYSNVGDLLHGHQSIFPQ
Sbjct: 61  GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLHGHQSIFPQ 113

[Close]
BLAST of Spg004497 vs. NCBI nr
Match: XP_022974026.1 (keratin, type II cytoskeletal 3 isoform X2 [Cucurbita maxima])

HSP 1 Score: 212.2 bits (539), Expect = 2.3e-51
Identity = 103/113 (91.15%), Postives = 111/113 (98.23%), Query Frame = 0 

Query: 1   MPRNMNGNRQEGGEDENGVIWKLPVLKSSRIGKLGPAFGLGVGCGVGFGIGLVGGAGFGP 60
           MPRNMNG+R+EGGEDE+G++WKLPVLKSSRIG+LGPAFGLGVGCGVGFGIGLVGGAGFGP
Sbjct: 1   MPRNMNGSRREGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGP 60

Query: 61  GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDEKRRYSNVGDLLHGHQSIFPQ 114
           GIPGLQLGFGLGAGCGVGLGFGYG GRGIAQD+KRRYSNVGDLL+G QSIFPQ
Sbjct: 61  GIPGLQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGRQSIFPQ 113

[Close]
BLAST of Spg004497 vs. NCBI nr
Match: XP_023521209.1 (fibroin heavy chain isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 211.8 bits (538), Expect = 3.0e-51
Identity = 103/113 (91.15%), Postives = 110/113 (97.35%), Query Frame = 0 

Query: 1   MPRNMNGNRQEGGEDENGVIWKLPVLKSSRIGKLGPAFGLGVGCGVGFGIGLVGGAGFGP 60
           MPRNMNG+R EG EDE+G++WKLPVLKSSRIG+LGPAFGLGVGCGVGFGIGLVGGAGFGP
Sbjct: 1   MPRNMNGSRHEGREDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGP 60

Query: 61  GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDEKRRYSNVGDLLHGHQSIFPQ 114
           GIPGLQLGFGLGAGCGVGLGFGYG GRGIAQD+KRRYSNVGDLL+GHQSIFPQ
Sbjct: 61  GIPGLQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGHQSIFPQ 113

[Close]
BLAST of Spg004497 vs. NCBI nr
Match: KAG7025112.1 (hypothetical protein SDJN02_13935 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 211.8 bits (538), Expect = 3.0e-51
Identity = 103/113 (91.15%), Postives = 110/113 (97.35%), Query Frame = 0 

Query: 1   MPRNMNGNRQEGGEDENGVIWKLPVLKSSRIGKLGPAFGLGVGCGVGFGIGLVGGAGFGP 60
           MPRNMNG+R EGGEDE+G++WKLPVLKSSRIG+LGPAFGLGVGCGVGFGIGLVGGAGFGP
Sbjct: 1   MPRNMNGSRHEGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGP 60

Query: 61  GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDEKRRYSNVGDLLHGHQSIFPQ 114
           GIPGLQLGFGLGAGCGVGLGFGYG GRGIAQD+KRRYSNVGDLL+G QSIFPQ
Sbjct: 61  GIPGLQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGRQSIFPQ 113

[Close]
BLAST of Spg004497 vs. ExPASy Swiss-Prot
Match: Q9JL61 (DNA-binding protein Rfx5 OS=Mus musculus OX=10090 GN=Rfx5 PE=1 SV=2)

HSP 1 Score: 44.7 bits (104), Expect = 8.2e-04
Identity = 36/75 (48.00%), Postives = 42/75 (56.00%), Query Frame = 0 

Query: 17  NGVIWKLPVLKSSRIGK---LGPAFGLGVGCGVGFGIGLVGGAGFGPGI-PGLQLGFGLG 76
           N ++  +P L  +  G    LGP FG G G G G G GL  GAG GPG+ PGL  G G G
Sbjct: 370 NMILPPVPTLSGAGPGPGPGLGPRFGPGPGLGPGPGPGL--GAGLGPGLGPGLGAGPGPG 429

Query: 77  AGCGVGLGFGYGVGR 88
            G G+G G G G GR
Sbjct: 430 LGAGLGAGLGLGPGR 442

[Close]
BLAST of Spg004497 vs. ExPASy TrEMBL
Match: A0A6J1IA95 (keratin, type II cytoskeletal 3 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111472645 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.1e-51
Identity = 103/113 (91.15%), Postives = 111/113 (98.23%), Query Frame = 0 

Query: 1   MPRNMNGNRQEGGEDENGVIWKLPVLKSSRIGKLGPAFGLGVGCGVGFGIGLVGGAGFGP 60
           MPRNMNG+R+EGGEDE+G++WKLPVLKSSRIG+LGPAFGLGVGCGVGFGIGLVGGAGFGP
Sbjct: 1   MPRNMNGSRREGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGP 60

Query: 61  GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDEKRRYSNVGDLLHGHQSIFPQ 114
           GIPGLQLGFGLGAGCGVGLGFGYG GRGIAQD+KRRYSNVGDLL+G QSIFPQ
Sbjct: 61  GIPGLQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGRQSIFPQ 113

[Close]
BLAST of Spg004497 vs. ExPASy TrEMBL
Match: A0A6J1F360 (keratin, type II cytoskeletal 2 epidermal isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111439279 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.4e-51
Identity = 103/113 (91.15%), Postives = 110/113 (97.35%), Query Frame = 0 

Query: 1   MPRNMNGNRQEGGEDENGVIWKLPVLKSSRIGKLGPAFGLGVGCGVGFGIGLVGGAGFGP 60
           MPRNMNG+R EGGEDE+G++WKLPVLKSSRIG+LGPAFGLGVGCGVGFGIGLVGGAGFGP
Sbjct: 1   MPRNMNGSRHEGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGP 60

Query: 61  GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDEKRRYSNVGDLLHGHQSIFPQ 114
           GIPGLQLGFGLGAGCGVGLGFGYG GRGIAQD+KRRYSNVGDLL+G QSIFPQ
Sbjct: 61  GIPGLQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGRQSIFPQ 113

[Close]
BLAST of Spg004497 vs. ExPASy TrEMBL
Match: A0A6J1ICW2 (keratin, type II cytoskeletal 3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472645 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 4.2e-51
Identity = 102/112 (91.07%), Postives = 110/112 (98.21%), Query Frame = 0 

Query: 1   MPRNMNGNRQEGGEDENGVIWKLPVLKSSRIGKLGPAFGLGVGCGVGFGIGLVGGAGFGP 60
           MPRNMNG+R+EGGEDE+G++WKLPVLKSSRIG+LGPAFGLGVGCGVGFGIGLVGGAGFGP
Sbjct: 1   MPRNMNGSRREGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGP 60

Query: 61  GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDEKRRYSNVGDLLHGHQSIFP 113
           GIPGLQLGFGLGAGCGVGLGFGYG GRGIAQD+KRRYSNVGDLL+G QSIFP
Sbjct: 61  GIPGLQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGRQSIFP 112

[Close]
BLAST of Spg004497 vs. ExPASy TrEMBL
Match: A0A6J1EY31 (keratin, type II cytoskeletal 2 epidermal isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111439279 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 5.5e-51
Identity = 102/112 (91.07%), Postives = 109/112 (97.32%), Query Frame = 0 

Query: 1   MPRNMNGNRQEGGEDENGVIWKLPVLKSSRIGKLGPAFGLGVGCGVGFGIGLVGGAGFGP 60
           MPRNMNG+R EGGEDE+G++WKLPVLKSSRIG+LGPAFGLGVGCGVGFGIGLVGGAGFGP
Sbjct: 1   MPRNMNGSRHEGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGP 60

Query: 61  GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDEKRRYSNVGDLLHGHQSIFP 113
           GIPGLQLGFGLGAGCGVGLGFGYG GRGIAQD+KRRYSNVGDLL+G QSIFP
Sbjct: 61  GIPGLQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGRQSIFP 112

[Close]
BLAST of Spg004497 vs. ExPASy TrEMBL
Match: A0A1S4E347 (glycine-rich cell wall structural protein 1 OS=Cucumis melo OX=3656 GN=LOC103498610 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.0e-49
Identity = 100/112 (89.29%), Postives = 104/112 (92.86%), Query Frame = 0 

Query: 1   MPRNMNGNRQEGGEDENGVIWKLPVLKSSRIGKLGPAFGLGVGCGVGFGIGLVGGAGFGP 60
           MPRNMNGNR   GEDE G++W LPVLKSSR G LGPAFGLGVGCGVGFGIGLVGGAGFGP
Sbjct: 1   MPRNMNGNRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGP 60

Query: 61  GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDEKRRYSNVGDLLHGHQSIFP 113
           GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQD+KRRYSNVGD+L GHQSIFP
Sbjct: 61  GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDVLRGHQSIFP 112

[Close]
BLAST of Spg004497 vs. TAIR 10
Match: AT4G10330.1 (glycine-rich protein )

HSP 1 Score: 135.6 bits (340), Expect = 2.5e-32
Identity = 63/94 (67.02%), Postives = 75/94 (79.79%), Query Frame = 0 

Query: 8   NRQEGGEDENGVIWKLPVLKSSRIGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQL 67
           NR+  G+D+ G++WKLP ++   IGK+GPAFGLGVGCG GFG GL+GG GFGPG+PGLQ 
Sbjct: 3   NRRRTGDDDKGLLWKLPQVRIRDIGKVGPAFGLGVGCGFGFGAGLIGGVGFGPGVPGLQF 62

Query: 68  GFGLGAGCGVGLGFGYGVGRGIAQDEKRRYSNVG 102
           G G GAGCG+G+GFGYGVGRG A D  R Y NVG
Sbjct: 63  GLGFGAGCGIGVGFGYGVGRGAAYDHSRSYYNVG 96

[Close]
BLAST of Spg004497 vs. TAIR 10
Match: AT1G66820.1 (glycine-rich protein )

HSP 1 Score: 53.5 bits (127), Expect = 1.3e-07
Identity = 35/70 (50.00%), Postives = 43/70 (61.43%), Query Frame = 0 

Query: 34  LGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQ-----LGFGLGAGCGVGLGFGYGVGRG 93
           +GP  G G+GCG G GIGL GG G G    GL      LGFG+G G G G G+G+GVG G
Sbjct: 39  VGPGIGGGIGCGAGIGIGLSGGLGIGAS-EGLDHSNVVLGFGIGCGIGFGFGYGFGVGGG 98

Query: 94  IAQDE-KRRY 98
            + D+ K R+
Sbjct: 99  YSFDDIKERF 107

[Close]
BLAST of Spg004497 vs. TAIR 10
Match: AT4G14301.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23450.1); Has 101 Blast hits to 93 proteins in 34 species: Archae - 0; Bacteria - 27; Metazoa - 16; Fungi - 5; Plants - 34; Viruses - 3; Other Eukaryotes - 16 (source: NCBI BLink). )

HSP 1 Score: 41.6 bits (96), Expect = 5.0e-04
Identity = 32/58 (55.17%), Postives = 36/58 (62.07%), Query Frame = 0 

Query: 31  IGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRG 89
           IGK G  FG G+G G GFG G+  G GFG GI G   G G G G G G GFG G+G+G
Sbjct: 53  IGKGGGIFGHGIGKGGGFGGGISKGGGFGGGI-GKGGGIGGGIGKGKGWGFGGGIGKG 109

[Close]
BLAST of Spg004497 vs. TAIR 10
Match: AT1G27695.1 (glycine-rich protein )

HSP 1 Score: 40.8 bits (94), Expect = 8.4e-04
Identity = 27/47 (57.45%), Postives = 31/47 (65.96%), Query Frame = 0 

Query: 41 GVGCGVGFGIGLVGGAGFG-PGIPGLQLGFGLGAGCGVGLGFGYGVG 87
          GVG G GFG+G   G G+G  G+P   LG G G GCGVGLG G+G G
Sbjct: 8  GVGVGFGFGVGCGFGVGWGFGGMPMNILGVGAGGGCGVGLGLGWGFG 54

[Close]
BLAST of Spg004497 vs. TAIR 10
Match: AT1G27695.2 (glycine-rich protein )

HSP 1 Score: 40.8 bits (94), Expect = 8.4e-04
Identity = 27/47 (57.45%), Postives = 31/47 (65.96%), Query Frame = 0 

Query: 41 GVGCGVGFGIGLVGGAGFG-PGIPGLQLGFGLGAGCGVGLGFGYGVG 87
          GVG G GFG+G   G G+G  G+P   LG G G GCGVGLG G+G G
Sbjct: 8  GVGVGFGFGVGCGFGVGWGFGGMPMNILGVGAGGGCGVGLGLGWGFG 54

The following BLAST results are available for this feature:
BLAST of Spg004497 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038889093.13.5e-5292.04ctenidin-1 isoform X1 [Benincasa hispida][more]
XP_038889094.13.5e-5292.04glycine-rich cell wall structural protein 1 isoform X2 [Benincasa hispida][more]
XP_022974026.12.3e-5191.15keratin, type II cytoskeletal 3 isoform X2 [Cucurbita maxima][more]
XP_023521209.13.0e-5191.15fibroin heavy chain isoform X2 [Cucurbita pepo subsp. pepo][more]
KAG7025112.13.0e-5191.15hypothetical protein SDJN02_13935 [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of Spg004497 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9JL618.2e-0448.00DNA-binding protein Rfx5 OS=Mus musculus OX=10090 GN=Rfx5 PE=1 SV=2[more]
BLAST of Spg004497 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1IA951.1e-5191.15keratin, type II cytoskeletal 3 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
A0A6J1F3601.4e-5191.15keratin, type II cytoskeletal 2 epidermal isoform X2 OS=Cucurbita moschata OX=36... [more]
A0A6J1ICW24.2e-5191.07keratin, type II cytoskeletal 3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
A0A6J1EY315.5e-5191.07keratin, type II cytoskeletal 2 epidermal isoform X1 OS=Cucurbita moschata OX=36... [more]
A0A1S4E3471.0e-4989.29glycine-rich cell wall structural protein 1 OS=Cucumis melo OX=3656 GN=LOC103498... [more]
BLAST of Spg004497 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G10330.12.5e-3267.02glycine-rich protein [more]
AT1G66820.11.3e-0750.00glycine-rich protein [more]
AT4G14301.15.0e-0455.17unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G27695.18.4e-0457.45glycine-rich protein [more]
AT1G27695.28.4e-0457.45glycine-rich protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34201GLYCINE-RICH PROTEINcoord: 5..109
NoneNo IPR availablePANTHERPTHR34201:SF1GLYCINE-RICH PROTEINcoord: 5..109

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg004497.1Spg004497.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane