Spg004110 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg004110
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	pathogenesis-related protein 1-like
Location	scaffold4: 1866504 .. 1867019 (+)
RNA-Seq Expression	Spg004110
Synteny	Spg004110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTCTTCTCAAGCTCTCCCTCTCCCTCTTTTGTGTCTTGAGCTTCACCATGCTTCCCTTTGCCCTCGCTCAAGACTCACCTCAGGACTTCGTCCGCGCCCACAACGAAGCCCGTGCCGAAGTCGGGGTCGGTCCTGTCTGTTGGGATGAAAATGTGGCAAATTTTGCTCGACAATATGCCCGAACACGCATCAACGACTGTGAGTTGGTGCACTCCGATGGCCCTTTCGGGGAGAATCTTGCGTGGGGCTCCCCCGACTTGTCAGGCATCGATGCAATTCAGACGTGGGTGAACGAGAAGCAATTCTACGATTACGACACCAATACATGTGTCGATGACGAGGTATGCGGCCATTACACTCAAGTGGTGTGGAGAAACTCAGTAAGAATTGGATGTGCCAAAGTGAAGTGCACGGATGGCCTTGGTGTATTCATCACATGTAACTATGATCCTAGGGGCAATATCCCAGGGGAAAGACCATTTGGAGGTGATCAAGGAGCTGCTTTTGAGTAA

mRNA sequence

ATGGTTCTTCTCAAGCTCTCCCTCTCCCTCTTTTGTGTCTTGAGCTTCACCATGCTTCCCTTTGCCCTCGCTCAAGACTCACCTCAGGACTTCGTCCGCGCCCACAACGAAGCCCGTGCCGAAGTCGGGGTCGGTCCTGTCTGTTGGGATGAAAATGTGGCAAATTTTGCTCGACAATATGCCCGAACACGCATCAACGACTGTGAGTTGGTGCACTCCGATGGCCCTTTCGGGGAGAATCTTGCGTGGGGCTCCCCCGACTTGTCAGGCATCGATGCAATTCAGACGTGGGTGAACGAGAAGCAATTCTACGATTACGACACCAATACATGTGTCGATGACGAGGTATGCGGCCATTACACTCAAGTGGTGTGGAGAAACTCAGTAAGAATTGGATGTGCCAAAGTGAAGTGCACGGATGGCCTTGGTGTATTCATCACATGTAACTATGATCCTAGGGGCAATATCCCAGGGGAAAGACCATTTGGAGGTGATCAAGGAGCTGCTTTTGAGTAA

Coding sequence (CDS)

ATGGTTCTTCTCAAGCTCTCCCTCTCCCTCTTTTGTGTCTTGAGCTTCACCATGCTTCCCTTTGCCCTCGCTCAAGACTCACCTCAGGACTTCGTCCGCGCCCACAACGAAGCCCGTGCCGAAGTCGGGGTCGGTCCTGTCTGTTGGGATGAAAATGTGGCAAATTTTGCTCGACAATATGCCCGAACACGCATCAACGACTGTGAGTTGGTGCACTCCGATGGCCCTTTCGGGGAGAATCTTGCGTGGGGCTCCCCCGACTTGTCAGGCATCGATGCAATTCAGACGTGGGTGAACGAGAAGCAATTCTACGATTACGACACCAATACATGTGTCGATGACGAGGTATGCGGCCATTACACTCAAGTGGTGTGGAGAAACTCAGTAAGAATTGGATGTGCCAAAGTGAAGTGCACGGATGGCCTTGGTGTATTCATCACATGTAACTATGATCCTAGGGGCAATATCCCAGGGGAAAGACCATTTGGAGGTGATCAAGGAGCTGCTTTTGAGTAA

Protein sequence

MVLLKLSLSLFCVLSFTMLPFALAQDSPQDFVRAHNEARAEVGVGPVCWDENVANFARQYARTRINDCELVHSDGPFGENLAWGSPDLSGIDAIQTWVNEKQFYDYDTNTCVDDEVCGHYTQVVWRNSVRIGCAKVKCTDGLGVFITCNYDPRGNIPGERPFGGDQGAAFE

Homology

[Close]

BLAST of Spg004110 vs. NCBI nr
Match: XP_038887491.1 (pathogenesis-related protein 1-like [Benincasa hispida])

HSP 1 Score: 270.8 bits (691), Expect = 8.2e-69
Identity = 123/162 (75.93%), Postives = 139/162 (85.80%), Query Frame = 0


Query: 1   MVLLKLSLSLFCVLSFTMLPFALAQDSPQDFVRAHNEARAEVGVGPVCWDENVANFARQY 60
           M LLKLSLSLFCVLSFTMLP +LAQDSPQD++ AHN ARA+VGVGPV WDE VA+FARQY
Sbjct: 1   MDLLKLSLSLFCVLSFTMLPSSLAQDSPQDYLNAHNAARAQVGVGPVQWDERVASFARQY 60

Query: 61  ARTRINDCELVHSDGPFGENLAWGSPDLSGIDAIQTWVNEKQFYDYDTNTCVDDEVCGHY 120
           A  RINDC+L+HS GP+GEN+AWG PDLSG  A+Q WVNEKQFY+Y TNTC   +VCGHY
Sbjct: 61  ANQRINDCKLIHSGGPYGENIAWGWPDLSGTAAVQMWVNEKQFYNYGTNTCAAGKVCGHY 120

Query: 121 TQVVWRNSVRIGCAKVKCTDGLGVFITCNYDPRGNIPGERPF 163
           TQVVWR SVRIGCAKVKCT+  G FI CNYDPRGNI G++P+
Sbjct: 121 TQVVWRKSVRIGCAKVKCTNNGGTFIICNYDPRGNIIGQKPY 162

[Close]

BLAST of Spg004110 vs. NCBI nr
Match: XP_008455064.1 (PREDICTED: pathogenesis-related protein PRB1-2-like [Cucumis melo] >KAA0031384.1 pathogenesis-related protein PRB1-2-like [Cucumis melo var. makuwa] >TYK06836.1 pathogenesis-related protein PRB1-2-like [Cucumis melo var. makuwa])

HSP 1 Score: 265.4 bits (677), Expect = 3.4e-67
Identity = 118/159 (74.21%), Postives = 135/159 (84.91%), Query Frame = 0


Query: 4   LKLSLSLFCVLSFTMLPFALAQDSPQDFVRAHNEARAEVGVGPVCWDENVANFARQYART 63
           L LSLSLFCVL+F MLP +LAQDSP+DFV AHN ARA+VGVGPV WDE VA+FARQYA  
Sbjct: 6   LSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFARQYANQ 65

Query: 64  RINDCELVHSDGPFGENLAWGSPDLSGIDAIQTWVNEKQFYDYDTNTCVDDEVCGHYTQV 123
           RINDC LVHS GP+GEN+AWG PDLSG  A+Q WVNEKQFY+Y +NTC   +VCGHYTQV
Sbjct: 66  RINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCGHYTQV 125

Query: 124 VWRNSVRIGCAKVKCTDGLGVFITCNYDPRGNIPGERPF 163
           VWRNSVRIGCAKV+CT+  G FI CNY+PRGNI G++P+
Sbjct: 126 VWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 164

[Close]

BLAST of Spg004110 vs. NCBI nr
Match: XP_022952656.1 (pathogenesis-related protein PRB1-2-like [Cucurbita moschata])

HSP 1 Score: 259.2 bits (661), Expect = 2.5e-65
Identity = 120/162 (74.07%), Postives = 135/162 (83.33%), Query Frame = 0


Query: 1   MVLLKLSLSLFCVLSFTMLPFALAQDSPQDFVRAHNEARAEVGVGPVCWDENVANFARQY 60
           M L KLSL LF V SFTMLP +LAQDSPQDFV AHN ARA+VGVGPV WDE VA+FARQY
Sbjct: 1   MDLFKLSLFLFYVSSFTMLPSSLAQDSPQDFVNAHNAARAQVGVGPVKWDEKVASFARQY 60

Query: 61  ARTRINDCELVHSDGPFGENLAWGSPDLSGIDAIQTWVNEKQFYDYDTNTCVDDEVCGHY 120
           A  RINDC L+HS GP+GEN+AWGS DLSGI A++ WV+EKQFY+  TNTC   +VCGHY
Sbjct: 61  ANQRINDCRLMHSSGPYGENIAWGSSDLSGIAAVRMWVDEKQFYNPRTNTCATGKVCGHY 120

Query: 121 TQVVWRNSVRIGCAKVKCTDGLGVFITCNYDPRGNIPGERPF 163
           TQVVWR+SVRIGCAKVKCT+  G FITCNYDP GN+ G+RPF
Sbjct: 121 TQVVWRSSVRIGCAKVKCTNNRGTFITCNYDPPGNVVGQRPF 162

[Close]

BLAST of Spg004110 vs. NCBI nr
Match: XP_022972505.1 (pathogenesis-related protein PRB1-3-like [Cucurbita maxima])

HSP 1 Score: 258.1 bits (658), Expect = 5.5e-65
Identity = 122/165 (73.94%), Postives = 133/165 (80.61%), Query Frame = 0


Query: 1   MVLLKLSLSLFCVLSFTMLPFALAQDSPQDFVRAHNEARAEVGVGPVCWDENVANFARQY 60
           M L KLSL LF V SF MLP  LAQDSPQD+V  HN+ARAEVGVGPV WDE+VANFARQY
Sbjct: 1   MDLFKLSLLLFYVQSFAMLPSFLAQDSPQDYVDEHNKARAEVGVGPVQWDESVANFARQY 60

Query: 61  ARTRINDCELVHSDGPFGENLAWGSPDLSGIDAIQTWVNEKQFYDYDTNTCVDDEVCGHY 120
           A  RINDC+L HSDG FGEN+++G PDLSG  A+Q WV EKQFYD  TNTC    +CGHY
Sbjct: 61  ANERINDCKLKHSDGSFGENISYGFPDLSGTAAVQDWVKEKQFYDPHTNTCAPHALCGHY 120

Query: 121 TQVVWRNSVRIGCAKVKCTDGLGVFITCNYDPRGNIPGERPFGGD 166
           TQVVWRNSVRIGCAKV CT+ LG FITCNYDP GNIPGERP+  D
Sbjct: 121 TQVVWRNSVRIGCAKVICTNNLGTFITCNYDPPGNIPGERPYSTD 165

[Close]

BLAST of Spg004110 vs. NCBI nr
Match: XP_022972506.1 (pathogenesis-related protein PR-1 type-like [Cucurbita maxima])

HSP 1 Score: 256.5 bits (654), Expect = 1.6e-64
Identity = 119/163 (73.01%), Postives = 135/163 (82.82%), Query Frame = 0


Query: 1   MVLLKLSLSLF-CVLSFTMLPFALAQDSPQDFVRAHNEARAEVGVGPVCWDENVANFARQ 60
           M L KLSLSLF  VLSF M   +LAQDSPQDFV AHN ARA+VGVGP+ WDE VA+FARQ
Sbjct: 1   MDLFKLSLSLFYVVLSFAMFHSSLAQDSPQDFVNAHNAARAQVGVGPIRWDERVASFARQ 60

Query: 61  YARTRINDCELVHSDGPFGENLAWGSPDLSGIDAIQTWVNEKQFYDYDTNTCVDDEVCGH 120
           YA  RINDC LVHS GP+GEN+AWGSPDLSG +A++ WV+EKQFY+  TNTC   +VCGH
Sbjct: 61  YANQRINDCRLVHSGGPYGENIAWGSPDLSGTNAVRMWVDEKQFYNPSTNTCAAGKVCGH 120

Query: 121 YTQVVWRNSVRIGCAKVKCTDGLGVFITCNYDPRGNIPGERPF 163
           YTQVVWRNSVRIGCAKV+CT+  G FITCNYDP GN+ G+RPF
Sbjct: 121 YTQVVWRNSVRIGCAKVRCTNNRGTFITCNYDPPGNVVGQRPF 163

[Close]

BLAST of Spg004110 vs. ExPASy Swiss-Prot
Match: Q41359 (Pathogenesis-related protein PR-1 type OS=Sambucus nigra OX=4202 PE=2 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.4e-50
Identity = 93/158 (58.86%), Postives = 122/158 (77.22%), Query Frame = 0


Query: 7   SLSLFCVLSFTMLPFALAQDSPQDFVRAHNEARAEVGVGPVCWDENVANFARQYARTRIN 66
           S++L CV++  M+ +++AQ+SPQD+V AHN AR+ V VGPV WDE+VA FARQYA++R  
Sbjct: 11  SVALVCVVALVMVQYSVAQNSPQDYVDAHNAARSAVNVGPVTWDESVAAFARQYAQSRAG 70

Query: 67  DCELVHSDGP-FGENLAWGSP-DLSGIDAIQTWVNEKQFYDYDTNTCVDDEVCGHYTQVV 126
           DC LVHS  P +GENLA+GS  +L+G +A+  WV E+  Y+ +TNTC   +VCGHYTQVV
Sbjct: 71  DCRLVHSGDPRYGENLAFGSGFELTGRNAVDMWVAERNDYNPNTNTCAPGKVCGHYTQVV 130

Query: 127 WRNSVRIGCAKVKCTDGLGVFITCNYDPRGNIPGERPF 163
           WRNSVRIGCA+V+C +G   FITCNY P GN  G+RP+
Sbjct: 131 WRNSVRIGCARVRCNNG-AWFITCNYSPPGNYAGQRPY 167

[Close]

BLAST of Spg004110 vs. ExPASy Swiss-Prot
Match: P33154 (Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 5.2e-50
Identity = 90/155 (58.06%), Postives = 113/155 (72.90%), Query Frame = 0


Query: 8   LSLFCVLSFTMLPFALAQDSPQDFVRAHNEARAEVGVGPVCWDENVANFARQYARTRIND 67
           L +F  L   ++  + AQDSPQD++R HN+AR  VGVGP+ WDE VA +AR YA     +
Sbjct: 10  LIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGN 69

Query: 68  CELVHSDGPFGENLAWGSPDLSGIDAIQTWVNEKQFYDYDTNTCVDDEVCGHYTQVVWRN 127
           C L+HS GP+GENLAWGS DLSG+ A+  WV+EK  Y+Y  NTC  + VCGHYTQVVWR 
Sbjct: 70  CRLIHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTC--NGVCGHYTQVVWRK 129

Query: 128 SVRIGCAKVKCTDGLGVFITCNYDPRGNIPGERPF 163
           SVR+GCAKV+C +G G  I+CNYDPRGN   E+P+
Sbjct: 130 SVRLGCAKVRCNNG-GTIISCNYDPRGNYVNEKPY 161

[Close]

BLAST of Spg004110 vs. ExPASy Swiss-Prot
Match: P35793 (Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.0e-49
Identity = 89/160 (55.62%), Postives = 112/160 (70.00%), Query Frame = 0


Query: 5   KLSLSLFCVLSFTMLPFALAQDSPQDFVRAHNEARAEVGVGPVCWDENVANFARQYARTR 64
           KL + L   +S  M+  + AQ+SPQD+V  HN ARA VGVG V W   +  FA+ YA  R
Sbjct: 5   KLVILLALAMSAAMVNLSQAQNSPQDYVSPHNAARAAVGVGAVSWSTKLQAFAQNYANQR 64

Query: 65  INDCELVHSDGPFGENLAWGS--PDLSGIDAIQTWVNEKQFYDYDTNTCVDDEVCGHYTQ 124
           INDC+L HS GP+GEN+ WGS   D    DA+ +WV+EK+ YDY +NTC   +VCGHYTQ
Sbjct: 65  INDCKLQHSGGPYGENIFWGSAGADWKASDAVNSWVSEKKDYDYGSNTCAAGKVCGHYTQ 124

Query: 125 VVWRNSVRIGCAKVKCTDGLGVFITCNYDPRGNIPGERPF 163
           VVWR S  IGCA+V C +  GVFITCNY+PRGNI G++P+
Sbjct: 125 VVWRASTSIGCARVVCNNNRGVFITCNYEPRGNIVGQKPY 164

[Close]

BLAST of Spg004110 vs. ExPASy Swiss-Prot
Match: P35792 (Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 3.3e-49
Identity = 87/160 (54.37%), Postives = 113/160 (70.62%), Query Frame = 0


Query: 5   KLSLSLFCVLSFTMLPFALAQDSPQDFVRAHNEARAEVGVGPVCWDENVANFARQYARTR 64
           KL++ L   ++  M+  + AQ+SPQD+V  HN AR+ VGVG V W   +  FA+ YA  R
Sbjct: 5   KLAILLALAMAAAMVNLSQAQNSPQDYVSPHNAARSAVGVGAVSWSTKLQAFAQNYANQR 64

Query: 65  INDCELVHSDGPFGENLAWGS--PDLSGIDAIQTWVNEKQFYDYDTNTCVDDEVCGHYTQ 124
           INDC+L HS GP+GEN+ WGS   D    DA+ +WVNEK+ Y+Y +NTC   +VCGHYTQ
Sbjct: 65  INDCKLQHSGGPYGENIFWGSAGADWKAADAVNSWVNEKKDYNYGSNTCAAGKVCGHYTQ 124

Query: 125 VVWRNSVRIGCAKVKCTDGLGVFITCNYDPRGNIPGERPF 163
           VVWR S  IGCA+V C +  GVFITCNY+PRGNI G++P+
Sbjct: 125 VVWRASTSIGCARVVCNNNRGVFITCNYEPRGNIVGQKPY 164

[Close]

BLAST of Spg004110 vs. ExPASy Swiss-Prot
Match: Q9ZNS4 (Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=PRB1 PE=2 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 3.3e-49
Identity = 86/139 (61.87%), Postives = 106/139 (76.26%), Query Frame = 0


Query: 24  AQDSPQDFVRAHNEARAEVGVGPVCWDENVANFARQYARTRINDCELVHSDGPFGENLAW 83
           AQDS QD+V AHN+AR+++GVGP+ WDE +A +AR YA     DC LVHS GP+GENLA 
Sbjct: 26  AQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPYGENLAK 85

Query: 84  GSPDLSGIDAIQTWVNEKQFYDYDTNTCVDDEVCGHYTQVVWRNSVRIGCAKVKCTDGLG 143
              DLSG+ A+  WVNEK  Y+YDTNTC  + VCGHYTQVVWRNSVR+GCAKV+C +G G
Sbjct: 86  SGGDLSGVAAVNLWVNEKANYNYDTNTC--NGVCGHYTQVVWRNSVRLGCAKVRCNNG-G 145

Query: 144 VFITCNYDPRGNIPGERPF 163
             I+CNYDP GN   ++P+
Sbjct: 146 TIISCNYDPPGNYANQKPY 161

[Close]

BLAST of Spg004110 vs. ExPASy TrEMBL
Match: A0A5A7SJR7 (Pathogenesis-related protein PRB1-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001400 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.7e-67
Identity = 118/159 (74.21%), Postives = 135/159 (84.91%), Query Frame = 0


Query: 4   LKLSLSLFCVLSFTMLPFALAQDSPQDFVRAHNEARAEVGVGPVCWDENVANFARQYART 63
           L LSLSLFCVL+F MLP +LAQDSP+DFV AHN ARA+VGVGPV WDE VA+FARQYA  
Sbjct: 6   LSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFARQYANQ 65

Query: 64  RINDCELVHSDGPFGENLAWGSPDLSGIDAIQTWVNEKQFYDYDTNTCVDDEVCGHYTQV 123
           RINDC LVHS GP+GEN+AWG PDLSG  A+Q WVNEKQFY+Y +NTC   +VCGHYTQV
Sbjct: 66  RINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCGHYTQV 125

Query: 124 VWRNSVRIGCAKVKCTDGLGVFITCNYDPRGNIPGERPF 163
           VWRNSVRIGCAKV+CT+  G FI CNY+PRGNI G++P+
Sbjct: 126 VWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 164

[Close]

BLAST of Spg004110 vs. ExPASy TrEMBL
Match: A0A1S3C0R9 (pathogenesis-related protein PRB1-2-like OS=Cucumis melo OX=3656 GN=LOC103495329 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.7e-67
Identity = 118/159 (74.21%), Postives = 135/159 (84.91%), Query Frame = 0


Query: 4   LKLSLSLFCVLSFTMLPFALAQDSPQDFVRAHNEARAEVGVGPVCWDENVANFARQYART 63
           L LSLSLFCVL+F MLP +LAQDSP+DFV AHN ARA+VGVGPV WDE VA+FARQYA  
Sbjct: 6   LSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFARQYANQ 65

Query: 64  RINDCELVHSDGPFGENLAWGSPDLSGIDAIQTWVNEKQFYDYDTNTCVDDEVCGHYTQV 123
           RINDC LVHS GP+GEN+AWG PDLSG  A+Q WVNEKQFY+Y +NTC   +VCGHYTQV
Sbjct: 66  RINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCGHYTQV 125

Query: 124 VWRNSVRIGCAKVKCTDGLGVFITCNYDPRGNIPGERPF 163
           VWRNSVRIGCAKV+CT+  G FI CNY+PRGNI G++P+
Sbjct: 126 VWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 164

[Close]

BLAST of Spg004110 vs. ExPASy TrEMBL
Match: A0A6J1GKU7 (pathogenesis-related protein PRB1-2-like OS=Cucurbita moschata OX=3662 GN=LOC111455285 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.2e-65
Identity = 120/162 (74.07%), Postives = 135/162 (83.33%), Query Frame = 0


Query: 1   MVLLKLSLSLFCVLSFTMLPFALAQDSPQDFVRAHNEARAEVGVGPVCWDENVANFARQY 60
           M L KLSL LF V SFTMLP +LAQDSPQDFV AHN ARA+VGVGPV WDE VA+FARQY
Sbjct: 1   MDLFKLSLFLFYVSSFTMLPSSLAQDSPQDFVNAHNAARAQVGVGPVKWDEKVASFARQY 60

Query: 61  ARTRINDCELVHSDGPFGENLAWGSPDLSGIDAIQTWVNEKQFYDYDTNTCVDDEVCGHY 120
           A  RINDC L+HS GP+GEN+AWGS DLSGI A++ WV+EKQFY+  TNTC   +VCGHY
Sbjct: 61  ANQRINDCRLMHSSGPYGENIAWGSSDLSGIAAVRMWVDEKQFYNPRTNTCATGKVCGHY 120

Query: 121 TQVVWRNSVRIGCAKVKCTDGLGVFITCNYDPRGNIPGERPF 163
           TQVVWR+SVRIGCAKVKCT+  G FITCNYDP GN+ G+RPF
Sbjct: 121 TQVVWRSSVRIGCAKVKCTNNRGTFITCNYDPPGNVVGQRPF 162

[Close]

BLAST of Spg004110 vs. ExPASy TrEMBL
Match: A0A6J1I8U1 (pathogenesis-related protein PRB1-3-like OS=Cucurbita maxima OX=3661 GN=LOC111471049 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.6e-65
Identity = 122/165 (73.94%), Postives = 133/165 (80.61%), Query Frame = 0


Query: 1   MVLLKLSLSLFCVLSFTMLPFALAQDSPQDFVRAHNEARAEVGVGPVCWDENVANFARQY 60
           M L KLSL LF V SF MLP  LAQDSPQD+V  HN+ARAEVGVGPV WDE+VANFARQY
Sbjct: 1   MDLFKLSLLLFYVQSFAMLPSFLAQDSPQDYVDEHNKARAEVGVGPVQWDESVANFARQY 60

Query: 61  ARTRINDCELVHSDGPFGENLAWGSPDLSGIDAIQTWVNEKQFYDYDTNTCVDDEVCGHY 120
           A  RINDC+L HSDG FGEN+++G PDLSG  A+Q WV EKQFYD  TNTC    +CGHY
Sbjct: 61  ANERINDCKLKHSDGSFGENISYGFPDLSGTAAVQDWVKEKQFYDPHTNTCAPHALCGHY 120

Query: 121 TQVVWRNSVRIGCAKVKCTDGLGVFITCNYDPRGNIPGERPFGGD 166
           TQVVWRNSVRIGCAKV CT+ LG FITCNYDP GNIPGERP+  D
Sbjct: 121 TQVVWRNSVRIGCAKVICTNNLGTFITCNYDPPGNIPGERPYSTD 165

[Close]

BLAST of Spg004110 vs. ExPASy TrEMBL
Match: A0A6J1I658 (pathogenesis-related protein PR-1 type-like OS=Cucurbita maxima OX=3661 GN=LOC111471050 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 7.7e-65
Identity = 119/163 (73.01%), Postives = 135/163 (82.82%), Query Frame = 0


Query: 1   MVLLKLSLSLF-CVLSFTMLPFALAQDSPQDFVRAHNEARAEVGVGPVCWDENVANFARQ 60
           M L KLSLSLF  VLSF M   +LAQDSPQDFV AHN ARA+VGVGP+ WDE VA+FARQ
Sbjct: 1   MDLFKLSLSLFYVVLSFAMFHSSLAQDSPQDFVNAHNAARAQVGVGPIRWDERVASFARQ 60

Query: 61  YARTRINDCELVHSDGPFGENLAWGSPDLSGIDAIQTWVNEKQFYDYDTNTCVDDEVCGH 120
           YA  RINDC LVHS GP+GEN+AWGSPDLSG +A++ WV+EKQFY+  TNTC   +VCGH
Sbjct: 61  YANQRINDCRLVHSGGPYGENIAWGSPDLSGTNAVRMWVDEKQFYNPSTNTCAAGKVCGH 120

Query: 121 YTQVVWRNSVRIGCAKVKCTDGLGVFITCNYDPRGNIPGERPF 163
           YTQVVWRNSVRIGCAKV+CT+  G FITCNYDP GN+ G+RPF
Sbjct: 121 YTQVVWRNSVRIGCAKVRCTNNRGTFITCNYDPPGNVVGQRPF 163

[Close]

BLAST of Spg004110 vs. TAIR 10
Match: AT2G14610.1 (pathogenesis-related gene 1 )

HSP 1 Score: 198.7 bits (504), Expect = 3.7e-51
Identity = 90/155 (58.06%), Postives = 113/155 (72.90%), Query Frame = 0


Query: 8   LSLFCVLSFTMLPFALAQDSPQDFVRAHNEARAEVGVGPVCWDENVANFARQYARTRIND 67
           L +F  L   ++  + AQDSPQD++R HN+AR  VGVGP+ WDE VA +AR YA     +
Sbjct: 10  LIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGN 69

Query: 68  CELVHSDGPFGENLAWGSPDLSGIDAIQTWVNEKQFYDYDTNTCVDDEVCGHYTQVVWRN 127
           C L+HS GP+GENLAWGS DLSG+ A+  WV+EK  Y+Y  NTC  + VCGHYTQVVWR 
Sbjct: 70  CRLIHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTC--NGVCGHYTQVVWRK 129

Query: 128 SVRIGCAKVKCTDGLGVFITCNYDPRGNIPGERPF 163
           SVR+GCAKV+C +G G  I+CNYDPRGN   E+P+
Sbjct: 130 SVRLGCAKVRCNNG-GTIISCNYDPRGNYVNEKPY 161

[Close]

BLAST of Spg004110 vs. TAIR 10
Match: AT3G19690.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 198.0 bits (502), Expect = 6.3e-51
Identity = 90/159 (56.60%), Postives = 114/159 (71.70%), Query Frame = 0


Query: 6   LSLSLFCVLSFTMLPFALAQDSPQDFVRAHNEARAEVGVGPVCWDENVANFARQYARTRI 65
           L  ++  +L+  +   +LA+D  Q F+ AHNEAR EVG+ P+ WD+ VA +A  YA  RI
Sbjct: 4   LKTNILFLLAIALFYGSLAEDLQQQFLEAHNEARNEVGLDPLVWDDEVAAYAASYANQRI 63

Query: 66  NDCELVHSDGPFGENLAWGSPDLSGIDAIQTWVNEKQFYDYDTNTCVDDE--VCGHYTQV 125
           NDC LVHS+GPFGEN+A  S ++S  DA + W+NEKQ+YDYD+NTC D     C HYTQV
Sbjct: 64  NDCALVHSNGPFGENIAMSSGEMSAEDAAEMWINEKQYYDYDSNTCNDPNGGTCLHYTQV 123

Query: 126 VWRNSVRIGCAKVKCTDGLGVFITCNYDPRGNIPGERPF 163
           VW+N+VR+GCAKV C  G G FITCNYDP GN  GE+PF
Sbjct: 124 VWKNTVRLGCAKVVCNSG-GTFITCNYDPPGNYIGEKPF 161

[Close]

BLAST of Spg004110 vs. TAIR 10
Match: AT4G33720.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 196.8 bits (499), Expect = 1.4e-50
Identity = 91/164 (55.49%), Postives = 115/164 (70.12%), Query Frame = 0


Query: 1   MVLLKLSLSLFCVLSF--TMLPFALAQDSPQDFVRAHNEARAEVGVGPVCWDENVANFAR 60
           M +   S +LF  ++F   ++    AQDSPQDF+  HN ARAEVGVGP+ WDE VA +AR
Sbjct: 1   MKIFNSSQNLFLAITFFLVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYAR 60

Query: 61  QYARTRINDCELVHSDGPFGENLAWGSPDLSGIDAIQTWVNEKQFYDYDTNTCVDDEVCG 120
            YA  R  DC + HS G +GEN+AW S  ++G+ A+  WV+E+  YDYD+NTC  D+ CG
Sbjct: 61  NYANQRKGDCAMKHSSGSYGENIAWSSGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCG 120

Query: 121 HYTQVVWRNSVRIGCAKVKCTDGLGVFITCNYDPRGNIPGERPF 163
           HYTQVVWRNS R+GCAKV+C +G   FITCNYDP GN  GE P+
Sbjct: 121 HYTQVVWRNSERLGCAKVRCNNG-QTFITCNYDPPGNWVGEWPY 163

[Close]

BLAST of Spg004110 vs. TAIR 10
Match: AT2G14580.1 (basic pathogenesis-related protein 1 )

HSP 1 Score: 196.1 bits (497), Expect = 2.4e-50
Identity = 86/139 (61.87%), Postives = 106/139 (76.26%), Query Frame = 0


Query: 24  AQDSPQDFVRAHNEARAEVGVGPVCWDENVANFARQYARTRINDCELVHSDGPFGENLAW 83
           AQDS QD+V AHN+AR+++GVGP+ WDE +A +AR YA     DC LVHS GP+GENLA 
Sbjct: 26  AQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPYGENLAK 85

Query: 84  GSPDLSGIDAIQTWVNEKQFYDYDTNTCVDDEVCGHYTQVVWRNSVRIGCAKVKCTDGLG 143
              DLSG+ A+  WVNEK  Y+YDTNTC  + VCGHYTQVVWRNSVR+GCAKV+C +G G
Sbjct: 86  SGGDLSGVAAVNLWVNEKANYNYDTNTC--NGVCGHYTQVVWRNSVRLGCAKVRCNNG-G 145

Query: 144 VFITCNYDPRGNIPGERPF 163
             I+CNYDP GN   ++P+
Sbjct: 146 TIISCNYDPPGNYANQKPY 161

[Close]

BLAST of Spg004110 vs. TAIR 10
Match: AT2G19990.1 (pathogenesis-related protein-1-like )

HSP 1 Score: 173.7 bits (439), Expect = 1.3e-43
Identity = 73/135 (54.07%), Postives = 98/135 (72.59%), Query Frame = 0


Query: 28  PQDFVRAHNEARAEVGVGPVCWDENVANFARQYARTRINDCELVHSDGPFGENLAWGSPD 87
           PQ+ +  HN+ARA VGVGP+ W+E +A +A+ YA  R  DC + HS GPFGENLA G   
Sbjct: 42  PQETLVVHNKARAMVGVGPMVWNETLATYAQSYAHERARDCAMKHSLGPFGENLAAGWGT 101

Query: 88  LSGIDAIQTWVNEKQFYDYDTNTCVDDEVCGHYTQVVWRNSVRIGCAKVKCTDGLGVFIT 147
           +SG  A + W+ EK+ YDYD+NTC  D VCGHYTQ+VWR+SVR+GCA V+C +   +++ 
Sbjct: 102 MSGPVATEYWMTEKENYDYDSNTCGGDGVCGHYTQIVWRDSVRLGCASVRCKNDEYIWVI 161

Query: 148 CNYDPRGNIPGERPF 163
           C+YDP GN  G+RP+
Sbjct: 162 CSYDPPGNYIGQRPY 176

The following BLAST results are available for this feature:

BLAST of Spg004110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887491.1	8.2e-69	75.93	pathogenesis-related protein 1-like [Benincasa hispida]	[more]
XP_008455064.1	3.4e-67	74.21	PREDICTED: pathogenesis-related protein PRB1-2-like [Cucumis melo] >KAA0031384.1...	[more]
XP_022952656.1	2.5e-65	74.07	pathogenesis-related protein PRB1-2-like [Cucurbita moschata]	[more]
XP_022972505.1	5.5e-65	73.94	pathogenesis-related protein PRB1-3-like [Cucurbita maxima]	[more]
XP_022972506.1	1.6e-64	73.01	pathogenesis-related protein PR-1 type-like [Cucurbita maxima]	[more]

BLAST of Spg004110 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q41359	1.4e-50	58.86	Pathogenesis-related protein PR-1 type OS=Sambucus nigra OX=4202 PE=2 SV=1	[more]
P33154	5.2e-50	58.06	Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1...	[more]
P35793	2.0e-49	55.63	Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare OX=4513 PE=2 SV=1	[more]
P35792	3.3e-49	54.38	Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare OX=4513 PE=2 SV=1	[more]
Q9ZNS4	3.3e-49	61.87	Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=PRB1 PE=2 SV=1	[more]

BLAST of Spg004110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SJR7	1.7e-67	74.21	Pathogenesis-related protein PRB1-2-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3C0R9	1.7e-67	74.21	pathogenesis-related protein PRB1-2-like OS=Cucumis melo OX=3656 GN=LOC103495329...	[more]
A0A6J1GKU7	1.2e-65	74.07	pathogenesis-related protein PRB1-2-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1I8U1	2.6e-65	73.94	pathogenesis-related protein PRB1-3-like OS=Cucurbita maxima OX=3661 GN=LOC11147...	[more]
A0A6J1I658	7.7e-65	73.01	pathogenesis-related protein PR-1 type-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of Spg004110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G14610.1	3.7e-51	58.06	pathogenesis-related gene 1	[more]
AT3G19690.1	6.3e-51	56.60	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT4G33720.1	1.4e-50	55.49	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT2G14580.1	2.4e-50	61.87	basic pathogenesis-related protein 1	[more]
AT2G19990.1	1.3e-43	54.07	pathogenesis-related protein-1-like	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein-related	PRINTS	PR00837	V5TPXLIKE	coord: 47..65 score: 30.91 coord: 145..158 score: 51.73 coord: 117..133 score: 66.19 coord: 93..106 score: 40.3
IPR001283	Cysteine-rich secretory protein-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 21..162
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 26..158 e-value: 2.9E-63 score: 226.2
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 32..150 e-value: 4.9E-22 score: 79.1
IPR035940	CAP superfamily	GENE3D	3.40.33.10	CAP	coord: 22..165 e-value: 1.6E-43 score: 150.5
IPR035940	CAP superfamily	SUPERFAMILY	55797	PR-1-like	coord: 20..161
None	No IPR available	PANTHER	PTHR10334:SF488	PATHOGENESIS-RELATED PROTEIN 1	coord: 21..162
None	No IPR available	CDD	cd05381	CAP_PR-1	coord: 28..162 e-value: 2.31586E-89 score: 255.251
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01010	CRISP_2	coord: 145..156
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01009	CRISP_1	coord: 118..128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg004110.1	Spg004110.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005615	extracellular space
cellular_component	GO:0005576	extracellular region