Spg004093 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg004093
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	protein TIC 21, chloroplastic
Location	scaffold4: 2683273 .. 2690332 (-)
RNA-Seq Expression	Spg004093
Synteny	Spg004093

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAAAATGAATTAAAGTAATCGATATGTAGCTTGGACTAAGAGATTAAAGTTTCGAATCACTTCACCCTCCAACTTTGTTGAACTAGAAGTATGTGTGTATATATAATGAAAATTTGGGCATTATACACGTGAATCCAAAAAAAGAAAAAAAAGAAAAAAGAAATTTAAGATTTAGATAAAAAAAAAAAAAACAGTTTATATAATTAGAACCCAGCCCCAAAACCCAGGCAAAGCTAACATCCACTGTAGGCTATCTGCCTGCAGATTGTATTTGATCGTCAATCATGCAGTCGCTTCTTTCGCCGGTAGCTCGAGGCGGTGCCTACTCGGCCGCCGCAGTTTATCCATCGGATTTTCACCTCAGCCGCTTCCATCGCCGGCCTTTCTCTGTACGTCAAGCATCCATTCTCAATTCTCCTCCCTATTCCCTTCCTTCATTTAGCGCCGTTCGATCTTCTTCTTCTTCTTCGTTGTTGCTTTTAAAGACTTTTGGTACTCTGGAGCATAGAAGAGGACAATTTTGTTCGGAAACACGCGCTTCTTCTAGTCCCATTTCGCCGACGGTTTCCCCAAATGATGAGGCTGAAAAGGCGAAACTGGCTCAGGTTCTCTTTCTTTTAATTCTTTCGGTTCTTTTTTTTTGCTTAACCCTTTTGATATGATGGTTAATTGATGAAGAAATGTAGTATTGGAAATTGGGCTTACCTTGCTTTGATTTCTTGGGTGAAAGTGAAACCGTGAAGAATTTTATGTTGGTTTAATCATAGATGAATCGTTGTGTTTACTAGTTTCAGAAGCTTCTTCTTTCTCTAATTTGATTGACTCTAGATGTTTTCTTAAATTCCTTCCTAATGAAGGTTTTGGCTTTGAAACTCTCTTAGCTCTTTCTTGATAAAGCAAAATAAGGTGTGAGGATCCCGCATTAATAAGTGAAGACCTCACAATTTATAAAATATATGGGTTACTTCACTCATTGCCAATTAGTTTTGAGATGGAACCTTATGTTATCTAATACGGTGTCAGAGTCCATAAAATCCAAATAAGTATTCAATCCAAAAAAACAAAATGGGATCCCATCCAAGAATGGTGAATCCAAAAGACACCATCTTGAGGGGCATGTTGAGGATACCGCATTGAAAAGATAAGTGGAAACCTCATAATTTATAATATGTTGGTTACTCCATTCATTACCATTTGGTTTTGAGATAGAACCTTATCTTATCTAATATTAGAAAACAGATAAATCACATTTACAGTTGACAGCTGCAGAAGAGCAGAAGCTAGGTAGATTAGATACTGAGCATGAGAAAATAGGCGTAAAAAATAAGCAAACTAGAGCTAGACAATATATGAAGTACACTGAAAAAGTGTAAACAGTGAGAAATGGCGCAGGCACAAAACAACATCGTGTTGTCTCTCCCAACTCCATCAGACAAGAGGAGATGTGAATGAGGCCACTTATGTACCGTGATAAAGGAAGATGCATTACAGAAGGGAGGTGGTGGAGTCAGTCATGATTAAGTTCATTCTACGATGAGATGCTGGAGGGGTTTGAAAATGTGGGGGAAGTATCCTTGAAGATGTCGGCAATGGAATTTTTTTTTTGCAATTTTAGGAGAAGGATGAGTTCTCTCGTGGAGCTTCCTAGAGAAAGCATATGGAATCTATGTTATGGGGGATTTACAAGGGGAGCCTGTGATTGTCTTAATTGATTGTGATTCAATGCACAACTTCATTGCAAGTAAGGTCGTGGGCCAGCTGCATTTAATCCAATCTGAAACAGATTAGTATGAGGCTTTATTGGTATTAAGTAATGCAATTAGAGGAAAAGAGTGTGAATGGAATCGACTCTTCCAAATCTAGAGGAAATCAAGGTTTATCTCCCATTTGAGCTGGGTAATTCTAATATTATTATACTTGAAACAGTGGTTTAGCAGTCTTGGAAGCCTGCAAATGATCTAAAAGACTCATAATGAGGTTATGAAGGGTAACAAAGACTGATTCTAGAAAGGGTTCCTTTCCTAAACCATTCCCTAGCTTCACTAAAAGCTATGGTCAAGGCTTCCATAGTGGGGTAGGGATTGTTACTAGAACATAGACAATGATTGTATCTCAAGGGGGGAACCAACCCCATCCTAGCTTAGTTGCGATTCTTAATGAGTATGAAAAGGTATTCTCCATGCCATCGGATTTTTCCTTTATCAATAGTTATGATCATGTAGTAATCTTGAAGGTACCTCCCCTTAATCTAGAAGAACAAGTTTGAGTGGTGGGTGGGGAATGCTAGCTGCCAACACAATGGAGCCGAACTCCAGTCCCAAATAAATTCCCAATATAGATGAATTGCTCGATAAACTTTATAAAGCAACAATATGCAATAAGTGGGACCTTGAATTTGTGTGTTTTTTGAACCCATGAAGGCTACTACGAATTCTTGGTAATATAAATTACCAGGTTCATCAGGTTGAGAAACTCAAGCAATCACTCTGTTTATGTGTTGATTGTTAGTATGTGCAGATCCCAGAAAAATTCAAGCCAAACAGAAGGAAGCTAAGTGGATTTTTAGCCTTTTTAGCAGATTTTAGTGACACTGAATGGCCCAGGCTGAACAATTGAAAAGAGATACATTCCGTTGGAACTCATAAGTTGAGGCACCTCTTAATCAATGCAAAACTCCTATGTCCAAGTCCTTTCCTTGAGCTTCCCTGATTTTCTAAAGTTAATTGTGAAAGTCACATTTTGGTTATGGGGTGGGTGTGCTGCAAAGGAAGAGCCAAAGATCCTAGGAAACTACTGCCAAGTCCTTTTGAACTAAGTGAGATAGAAATCTATCAAGTAATAATATTAAGTGGCGGCCTACTTGCTTAGATGGAGGTTTATTGCCCACATTGATCAAATGAGACTAAAATAATTGAAAGAACAAAGGTGCTTGACAAAGTGGTTGGGGTTTTGATTTCTGTATATAATGTCGTGAACTAGGGAATAAGGCTATTAAAGAGCATGTAAAAGCAAATTTCTACCTAGTCCAAGCCCAACTCAACAGACCATTATATGGAAGGTCGGGCCTCTCCCTCACACTTAATTGTGGAGTCAGATCAAAGTTGGTTTGGATGGAATTTCATATTTAGTAGTCACAGTTCCTGAGGATCCCCTCTCATCTTTTTTCCTCCGAAATAACCATTGTACTGTGATTGGGGACATTCAGCCGAGCTGATGAAAATTTACAAACATGTAGTTGCGGATTCATATTGGAAGGGGATTACAGAGATGGCTCACGAGTATGTATCAAATTGTACAATTTGTCAAAATAATAAGTACATAGTGATGTCCCCAACAAGCCTATTGCAGCCACAACCTATCTGACAGTTGTCATGGGATTATCTTTACTATGGACTTTGTACAAATATGAGGGAATGGTCTTAGTATTGATGGTAGTGGATTGATTGATGAAATATGCTCAGTTCGTTGCTCTCAATCATCCTTACATTGTAATGTAGCTTCTGTAGCTTCTTTGTTTATCAAGAAAATTTTTAAGCTCTGTAGCTGACCTAGGTAGCTCTATCTCCATGAGAAACTTTTGGAATTAACTATTCAAACTACAGGGTATTATTTTGAAGTACACCACGTCATGCAATCTTCAAATGTATTAGTAATCAGAGGTTGATAATCAGGGGTTGGAAACAAGGTGCTTTGCAATGACTACAGCAGGGGCCAAATCACTGTCGTGGGCTGAGTATTAGTTCATTACATACTACTATGTTACCTCAAAGACTACCTAATTTCAACTTCTGTTTGGTTAAGGTTGTCTCTTTTCAACTTCTTTTAATGCTGCCTCTTCTCAACTTTTGTATTATTGTATAGGAGGGTGATAACTGTTAAGAGTGGAAACTTGACGGTACATTCAACTTATTTTAGAAAGAATAAGCATTAGTCGAAGGACATGTTTTGGAGTGATTTTGGAATGGTCAAAAACACTTTTGTCAAGCCCTTTGTGGACATGACAAAAGTGATTTTGACAATTCCAAAAATCACTCCCAAACATGTTAACATGTCCTAAGTAGGAAAAGTGGAGTGATTTTGTACTAGAGAAGAGAGACTACTTGAGCAGAGAGCAGGTGAGAAAGTGAGGCAGTGTGAGTACGTAAACATGTGAAATGTAAGCTCACAGTTTATGGTGGACAGAAAAAGCCGAAGCTTAGGTGGCTTAGACACTGAGCATAAGTAGTTACATGCAAAAAATGAGCAACTAGAGCTACACAAATAGTGAATTCACTCTAGAAAAAGTATAAACATTAAGAAAGGACACAAATATTGAGCATCATTGTAGAGTATCTTCGCATTTCGGATCAAATTCTTCATTTTATATGTATTTGTTATGAAATGGCCAATGGGAAGAAAAATAGGATTTTATGATGCTCAAATTATTTCCTAAACTGTTTGATTGCATAACCTCTTTACTACTGCAAATGAACAGTTTATTTAGGTCTTTATAATGTTTCTTCATGATAACCAAAGTAGACTGGAAGAGACTAAATTGGACAAAGTGATAAATTTGTTTAAACTTCAAAAGTACTACGTTCTTTATGATATTCACGAAGTGAAACTATCTGATATATTGTCATCTAGGCTGCATGTTGTTTAGTTGGTTACCTTGCTTCTTACTGTTATGTTGCTGTTATTGTCAAATGCTTGTGTGGTGGCTTGGTTAGTTTGTTCTTTGTTGTTTGTTAAGTAGTTTACTGTGTTATTGCTGGTTAATTGGCAGCATATAGTCAAGTGCTATGCATCTATAGTCATTACTTTTAAATTGAATAATAATTTCTTGCGAGTGTTCTTCAAAAGGTTCCTAGACTGCATCACTATCATTATTGCTATTCATATAATGTACTAAGTTGCTTCGATGGTTTAGGTAGCAAAGAGATTAGAGAAGACATCGAGGTATTTCAAGAGGCTGGGTAATCTTGGATTTTGGGGACAGTTGGTATGCACTATTGTGGCTGCCGTTATTCTTTCATTCTCTGTTGTCATCACCGGGAAAATTACATCACCTGCCACTTTTTATGCTACTGCTGGTGGTATTGTGGCAGCTTTCATTTCTGTGTTTTGGTCCTTTGGTTACATTCGGCTTTCTGATAAACTTCAACGGACAGCAAATCAACCCTCCAAGGTATATAAATACTCATTCTCTCTGTGTTTTCCGATTGCTCAAGATTACTGTTAGGCTTTAGTGTGCACAAAACTATTCATTTGTTCCCCGGCCTTCTTAATGCAAAACCATGGTCATCCATCCAATTTTTGTCTAGTAATTAACAGGATTTCTTTGCTTTCAAAAGTAGATCTTATTATTTTTTATAACATTTATCTACTTGAAAATGAAAAAAGATGACCTGTATGTTTACCCCTTGGATTATTTTGTATTTAGTAAAGATTTTAAAAGGCTTTATCCCCTTTAGTATTCTTCTATCCAAACATGGTGAACTTTAGGCTTTGACATTAAAATTGGTGCCTTGCTGAGAGATTGGACATGGTGAATCCATGGGCACTTCTGACATTTGCGGATTTATGTTACTTTTTATTTTTTTACTCAAGAAAATTTAGACTTAAGAAGTTGTTTGTCAAACGATTTAGTTCTTATAATAAGTCATATATCAACCTTTCGGCATGCTTCCTTTCCTTAGTTCCTCAATCATTTATTTTTGCAACCTCGCACTAATAGACTTGGTTCTATTATTTGGTAACCGAATGAGTAGCTGTTTTGACATAATTTTGCTGCCAAACATGAGCATGTGTAAATTAAAGTAGAAAATTGACAAAACTCACGTTTCTGCATTGTATTTGTTGATCCCAATTTCAGGCTCCTCCTCGAGCTGATGTTGTGAACAGCTTAAAAAATGGAATAGTAGTGAACCTTCTGGGCATGGGTGCTGCCATTCTGGGGATGCAAGCGACGGTGGGATTGTTAGTTGCTAAGGCTCTTACTTCCTCAGCAATTCCTTATTATCAGGGAGCCTCACCTGGGAATAGCCCTGTTCTTGCTTTAGATGTATTCTTAGTACAGGTACGTTTTTTTCTCGACGGTTATTTTGCTGAACATAAAAGATCTCAAGATTTTGGACTCATGTACATGCCATAGGAAATTTGATTGACCTGCTATGCTAAAAACTAAAAATCTTTGCAGTTAAGAGTCACTGTGAATCGGCAATTATTGCCGCGTTTAGTTGGTTGGATATGGTTCAGAGTGCTTTTACAATGACGAAAAAGTTATATTGATTGGAAGAGCATATCATTTTACTTCTCCTGTAACTATGGGCAATCATGATATTGTAAAGGAATATATGTTCTTTTAAAAAAGAACAAAAAGAGCAGGGCTGTTACTGTTAGGATAGGTGAAGATTGCGAGAGACACAAAACAGGAAAGCTCACCCAAGCATATGAACCAAACTTGTAAAAGGCATATCAAAATGTACACTGATTCTTGATGAGATAATACTAGTTTCCTTAATTTAAGGGCCTTGTGCCATTTAATGACTTCTTTAACCTTCATTTTTGCAGGCTTCTGCGAACACTATCCTCTCTCATTTCCTCGGCCTCGTTTTCTCATTGGAGCTACTACGCTCGGTGACATTACCCGCTGCTGAGAGCATTCCTATTCCCCGAATAGCATAACCTCCCTCTGTGCCCCTTCTAGTTGTTAATGCAGCTGCATATTCGACGTCGGAGGCAACACAGTACGAATTCTTCGCGAGTTTAATGTCCATTTTCAAACGTAATCAAAGCCATTTGTATTTTTGTTGTGCCTGTTCACATCCATCTGATTAGGGTACTCTTTTTTTCTGGGGTGGGTGGAAATCAAAAGCCTCTCTTGACTTAAATAGTTGCAGTGGTCCTTGAAGGTGTTTTTCTGCGGGTAGATTAAATGGATGTTTCTTGTATTGTATTAGAAGAAGACTGGGCAAGTCATGTCAAACTCTTCTATCAATGTTTAGATTTAAATATGGTTCTGTCTATGAGTTTTAATCTGTTTTCCATTTTAATTTATGAAAATTATTTACACGGTTG

mRNA sequence

ATGCAGTCGCTTCTTTCGCCGGTAGCTCGAGGCGGTGCCTACTCGGCCGCCGCAGTTTATCCATCGGATTTTCACCTCAGCCGCTTCCATCGCCGGCCTTTCTCTGTACGTCAAGCATCCATTCTCAATTCTCCTCCCTATTCCCTTCCTTCATTTAGCGCCGTTCGATCTTCTTCTTCTTCTTCGTTGTTGCTTTTAAAGACTTTTGGTACTCTGGAGCATAGAAGAGGACAATTTTGTTCGGAAACACGCGCTTCTTCTAGTCCCATTTCGCCGACGGTTTCCCCAAATGATGAGGCTGAAAAGGCGAAACTGGCTCAGGCTGCATGTTGTTTAGTTGGTTACCTTGCTTCTTACTGTTATGTTGCTGTTATTGTCAAATGCTTGTGTGGTGGCTTGGTAGCAAAGAGATTAGAGAAGACATCGAGGTATTTCAAGAGGCTGGGTAATCTTGGATTTTGGGGACAGTTGGTATGCACTATTGTGGCTGCCGTTATTCTTTCATTCTCTGTTGTCATCACCGGGAAAATTACATCACCTGCCACTTTTTATGCTACTGCTGGTGGTATTGTGGCAGCTTTCATTTCTGTGTTTTGGTCCTTTGGTTACATTCGGCTTTCTGATAAACTTCAACGGACAGCAAATCAACCCTCCAAGGCTCCTCCTCGAGCTGATGTTGTGAACAGCTTAAAAAATGGAATAGTAGTGAACCTTCTGGGCATGGGTGCTGCCATTCTGGGGATGCAAGCGACGGTGGGATTGTTAGTTGCTAAGGCTCTTACTTCCTCAGCAATTCCTTATTATCAGGGAGCCTCACCTGGGAATAGCCCTGTTCTTGCTTTAGATGTATTCTTAGTACAGTTAAGAGTCACTGTGAATCGGCAATTATTGCCGCGTTTAGTTGGTTGGATATGGTTCAGAGCTTCTGCGAACACTATCCTCTCTCATTTCCTCGGCCTCGTTTTCTCATTGGAGCTACTACGCTCGGTGACATTACCCGCTGCTGAGAGCATTCCTATTCCCCGAATAGCATAA

Coding sequence (CDS)

ATGCAGTCGCTTCTTTCGCCGGTAGCTCGAGGCGGTGCCTACTCGGCCGCCGCAGTTTATCCATCGGATTTTCACCTCAGCCGCTTCCATCGCCGGCCTTTCTCTGTACGTCAAGCATCCATTCTCAATTCTCCTCCCTATTCCCTTCCTTCATTTAGCGCCGTTCGATCTTCTTCTTCTTCTTCGTTGTTGCTTTTAAAGACTTTTGGTACTCTGGAGCATAGAAGAGGACAATTTTGTTCGGAAACACGCGCTTCTTCTAGTCCCATTTCGCCGACGGTTTCCCCAAATGATGAGGCTGAAAAGGCGAAACTGGCTCAGGCTGCATGTTGTTTAGTTGGTTACCTTGCTTCTTACTGTTATGTTGCTGTTATTGTCAAATGCTTGTGTGGTGGCTTGGTAGCAAAGAGATTAGAGAAGACATCGAGGTATTTCAAGAGGCTGGGTAATCTTGGATTTTGGGGACAGTTGGTATGCACTATTGTGGCTGCCGTTATTCTTTCATTCTCTGTTGTCATCACCGGGAAAATTACATCACCTGCCACTTTTTATGCTACTGCTGGTGGTATTGTGGCAGCTTTCATTTCTGTGTTTTGGTCCTTTGGTTACATTCGGCTTTCTGATAAACTTCAACGGACAGCAAATCAACCCTCCAAGGCTCCTCCTCGAGCTGATGTTGTGAACAGCTTAAAAAATGGAATAGTAGTGAACCTTCTGGGCATGGGTGCTGCCATTCTGGGGATGCAAGCGACGGTGGGATTGTTAGTTGCTAAGGCTCTTACTTCCTCAGCAATTCCTTATTATCAGGGAGCCTCACCTGGGAATAGCCCTGTTCTTGCTTTAGATGTATTCTTAGTACAGTTAAGAGTCACTGTGAATCGGCAATTATTGCCGCGTTTAGTTGGTTGGATATGGTTCAGAGCTTCTGCGAACACTATCCTCTCTCATTTCCTCGGCCTCGTTTTCTCATTGGAGCTACTACGCTCGGTGACATTACCCGCTGCTGAGAGCATTCCTATTCCCCGAATAGCATAA

Protein sequence

MQSLLSPVARGGAYSAAAVYPSDFHLSRFHRRPFSVRQASILNSPPYSLPSFSAVRSSSSSSLLLLKTFGTLEHRRGQFCSETRASSSPISPTVSPNDEAEKAKLAQAACCLVGYLASYCYVAVIVKCLCGGLVAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQLRVTVNRQLLPRLVGWIWFRASANTILSHFLGLVFSLELLRSVTLPAAESIPIPRIA

Homology

[Close]

BLAST of Spg004093 vs. NCBI nr
Match: XP_038888764.1 (protein TIC 21, chloroplastic [Benincasa hispida])

HSP 1 Score: 486.1 bits (1250), Expect = 2.5e-133
Identity = 276/345 (80.00%), Postives = 285/345 (82.61%), Query Frame = 0


Query: 1   MQSLLSPVARGGAY-SAAAVYPSDFHLSRFHRRPFSVRQASILNSPPYSLPSFSAVRSSS 60
           MQSLLSPVAR G + +AAAVY SD HLSRFHRRPFSVR +S LNSPP SL SF+AVRSSS
Sbjct: 1   MQSLLSPVARSGPFPAAAAVYSSDLHLSRFHRRPFSVRHSSNLNSPPNSLSSFNAVRSSS 60

Query: 61  SSSLLLLKTFGTLEHRRGQFCSETRASSSPISPTVSPNDEAEKAKLAQAACCLVGYLASY 120
           SSSLLLLKTFGTLEHRRGQF SET ASSSPISP V PNDEA+KAKLAQ            
Sbjct: 61  SSSLLLLKTFGTLEHRRGQFFSETHASSSPISPAVPPNDEADKAKLAQ------------ 120

Query: 121 CYVAVIVKCLCGGLVAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVITGKITS 180
                         VAKRLEKTS+YFKRLG+LGFWGQLVCTIVAAVILSFSVVITGKITS
Sbjct: 121 --------------VAKRLEKTSKYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITS 180

Query: 181 PATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLL 240
           PATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSL+NGIVVNLL
Sbjct: 181 PATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLL 240

Query: 241 GMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQLRVTVNRQLLPR 300
           GMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQ            
Sbjct: 241 GMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQ------------ 299

Query: 301 LVGWIWFRASANTILSHFLGLVFSLELLRSVTLPAAESIPIPRIA 345
                   ASANTILSHFLGLVFSLELLRSVTLPA +SIPIPRIA
Sbjct: 301 --------ASANTILSHFLGLVFSLELLRSVTLPATDSIPIPRIA 299

[Close]

BLAST of Spg004093 vs. NCBI nr
Match: XP_022952785.1 (protein TIC 21, chloroplastic [Cucurbita moschata])

HSP 1 Score: 486.1 bits (1250), Expect = 2.5e-133
Identity = 274/344 (79.65%), Postives = 280/344 (81.40%), Query Frame = 0


Query: 1   MQSLLSPVARGGAYSAAAVYPSDFHLSRFHRRPFSVRQASILNSPPYSLPSFSAVRSSSS 60
           MQSLLSPV RGG +  AAVY S+ HLS F+RRPFSVR AS L SPP SLPSFSA+R  SS
Sbjct: 1   MQSLLSPVGRGGPFPVAAVYTSELHLSCFNRRPFSVRYASNLKSPPNSLPSFSAIRPPSS 60

Query: 61  SSLLLLKTFGTLEHRRGQFCSETRASSSPISPTVSPNDEAEKAKLAQAACCLVGYLASYC 120
            SLLLLK FGTLEHRRGQFCS+T ASSSPISPTV PNDEAEKAKLAQ             
Sbjct: 61  FSLLLLKNFGTLEHRRGQFCSDTCASSSPISPTVPPNDEAEKAKLAQ------------- 120

Query: 121 YVAVIVKCLCGGLVAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVITGKITSP 180
                        VAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVV+TGKITSP
Sbjct: 121 -------------VAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSP 180

Query: 181 ATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLG 240
           ATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLG
Sbjct: 181 ATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLG 240

Query: 241 MGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQLRVTVNRQLLPRL 300
           MGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQ             
Sbjct: 241 MGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQ------------- 298

Query: 301 VGWIWFRASANTILSHFLGLVFSLELLRSVTLPAAESIPIPRIA 345
                  ASANTILSHFLGLVFSLELLRSVTLPA ESIPIPRIA
Sbjct: 301 -------ASANTILSHFLGLVFSLELLRSVTLPATESIPIPRIA 298

[Close]

BLAST of Spg004093 vs. NCBI nr
Match: KAG6571949.1 (Protein TIC 21, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011639.1 Protein TIC 21, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 480.7 bits (1236), Expect = 1.0e-131
Identity = 270/344 (78.49%), Postives = 279/344 (81.10%), Query Frame = 0


Query: 1   MQSLLSPVARGGAYSAAAVYPSDFHLSRFHRRPFSVRQASILNSPPYSLPSFSAVRSSSS 60
           MQSLLSPV RGG + +AAVY S+ HLS F+RRPFSVR AS   SP  SLPSFSA+R  SS
Sbjct: 1   MQSLLSPVGRGGPFPSAAVYTSELHLSCFNRRPFSVRYASNFKSPHNSLPSFSAIRPPSS 60

Query: 61  SSLLLLKTFGTLEHRRGQFCSETRASSSPISPTVSPNDEAEKAKLAQAACCLVGYLASYC 120
            SLLL K FGTLEHRRGQFCS+TRASSSPISPTV PNDEAEKAKLAQ             
Sbjct: 61  FSLLLFKNFGTLEHRRGQFCSDTRASSSPISPTVPPNDEAEKAKLAQ------------- 120

Query: 121 YVAVIVKCLCGGLVAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVITGKITSP 180
                        VAKRLEKTSRYF+RLGNLGFWGQLVCTIVAAVILSFSVV+TGKITSP
Sbjct: 121 -------------VAKRLEKTSRYFRRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSP 180

Query: 181 ATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLG 240
           ATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLG
Sbjct: 181 ATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLG 240

Query: 241 MGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQLRVTVNRQLLPRL 300
           MGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQ             
Sbjct: 241 MGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQ------------- 298

Query: 301 VGWIWFRASANTILSHFLGLVFSLELLRSVTLPAAESIPIPRIA 345
                  ASANTILSHFLGLVFSLELLRSVTLPA ESIPIPR+A
Sbjct: 301 -------ASANTILSHFLGLVFSLELLRSVTLPATESIPIPRMA 298

[Close]

BLAST of Spg004093 vs. NCBI nr
Match: XP_022972396.1 (protein TIC 21, chloroplastic [Cucurbita maxima])

HSP 1 Score: 479.9 bits (1234), Expect = 1.8e-131
Identity = 270/344 (78.49%), Postives = 279/344 (81.10%), Query Frame = 0


Query: 1   MQSLLSPVARGGAYSAAAVYPSDFHLSRFHRRPFSVRQASILNSPPYSLPSFSAVRSSSS 60
           MQSLLSPV RGG + +AAVY S+ HLS F+RRPFSVR AS L SP  SLPSFSA+R  SS
Sbjct: 1   MQSLLSPVGRGGPFPSAAVYTSELHLSCFNRRPFSVRYASNLKSPHNSLPSFSAIRPPSS 60

Query: 61  SSLLLLKTFGTLEHRRGQFCSETRASSSPISPTVSPNDEAEKAKLAQAACCLVGYLASYC 120
            SLLLLK FG LEHRRGQFCS+TRASSSPISPTV PNDEAEKAKLAQ             
Sbjct: 61  FSLLLLKIFGALEHRRGQFCSDTRASSSPISPTVPPNDEAEKAKLAQ------------- 120

Query: 121 YVAVIVKCLCGGLVAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVITGKITSP 180
                        VAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVV+TGKITSP
Sbjct: 121 -------------VAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSP 180

Query: 181 ATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLG 240
           ATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLG
Sbjct: 181 ATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLG 240

Query: 241 MGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQLRVTVNRQLLPRL 300
           MGAAILGMQATVGLLVAKALTSSAIPYYQG  PGNSPVLALDVFLVQ             
Sbjct: 241 MGAAILGMQATVGLLVAKALTSSAIPYYQGVPPGNSPVLALDVFLVQ------------- 298

Query: 301 VGWIWFRASANTILSHFLGLVFSLELLRSVTLPAAESIPIPRIA 345
                  ASANTILSHFLGLVFSLELLRSVT+PAAESIPIP+IA
Sbjct: 301 -------ASANTILSHFLGLVFSLELLRSVTMPAAESIPIPKIA 298

[Close]

BLAST of Spg004093 vs. NCBI nr
Match: XP_023553835.1 (protein TIC 21, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 479.2 bits (1232), Expect = 3.0e-131
Identity = 270/344 (78.49%), Postives = 279/344 (81.10%), Query Frame = 0


Query: 1   MQSLLSPVARGGAYSAAAVYPSDFHLSRFHRRPFSVRQASILNSPPYSLPSFSAVRSSSS 60
           MQSLLSPV RGG + +AAVY S+ H S F+RRPFSVR AS L SP  SLPSFSA+R  SS
Sbjct: 1   MQSLLSPVGRGGPFPSAAVYTSELHPSCFNRRPFSVRYASNLKSPHNSLPSFSAIRPPSS 60

Query: 61  SSLLLLKTFGTLEHRRGQFCSETRASSSPISPTVSPNDEAEKAKLAQAACCLVGYLASYC 120
            SLLLLK FG+LEHRRGQFCS+TRASSSPISPTV PNDEAEKAKLAQ             
Sbjct: 61  FSLLLLKNFGSLEHRRGQFCSDTRASSSPISPTVPPNDEAEKAKLAQ------------- 120

Query: 121 YVAVIVKCLCGGLVAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVITGKITSP 180
                        VAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVV+TGKITSP
Sbjct: 121 -------------VAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSP 180

Query: 181 ATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLG 240
           ATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLG
Sbjct: 181 ATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLG 240

Query: 241 MGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQLRVTVNRQLLPRL 300
           MGAAILGMQATVGLLVAKALTSSAIPYYQG SPGNSPVLALDVFLVQ             
Sbjct: 241 MGAAILGMQATVGLLVAKALTSSAIPYYQGVSPGNSPVLALDVFLVQ------------- 298

Query: 301 VGWIWFRASANTILSHFLGLVFSLELLRSVTLPAAESIPIPRIA 345
                  ASANTILSHFLGLVFSLELLRSVTLPA ESIPIPR+A
Sbjct: 301 -------ASANTILSHFLGLVFSLELLRSVTLPATESIPIPRMA 298

[Close]

BLAST of Spg004093 vs. ExPASy Swiss-Prot
Match: Q9SHU7 (Protein TIC 21, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC21 PE=1 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 1.9e-80
Identity = 188/346 (54.34%), Postives = 223/346 (64.45%), Query Frame = 0


Query: 1   MQSLLSPVARGGAYSAAAVYPSDFHLSRFHRRPFSVRQASILNSPPYSLPSFSAVRSSSS 60
           MQSLL P A     SA A+ P   H   F+ +  S R   + N  P  L        SS 
Sbjct: 1   MQSLLLPPASSSGVSAVALRPGFQH--SFNHQSLSTRSLPLFN--PLLLAPKKKTTISSY 60

Query: 61  SSLLLLKTFG-TLEHRRGQFCSETRASSSPISPTVSPND-EAEKAKLAQAACCLVGYLAS 120
            S   L  +G  +   +  F   T A S P SP+  P D E +KAKLAQ           
Sbjct: 61  QSPPSLSVYGFQIGGSKPSFTPSTVAFSYPTSPSSVPGDNEVDKAKLAQ----------- 120

Query: 121 YCYVAVIVKCLCGGLVAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVITGKIT 180
                          VAKRLEKTSRYFKRLG++GFWGQLV T+VAAVILSFS+V+TGK T
Sbjct: 121 ---------------VAKRLEKTSRYFKRLGSIGFWGQLVSTVVAAVILSFSIVVTGKPT 180

Query: 181 SPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNL 240
           SPATFYATA GI AAF+SVFWSFGYIRLS++L+RT+  P+KAPPRADVV  L++GI+VN+
Sbjct: 181 SPATFYATASGIAAAFVSVFWSFGYIRLSERLRRTSIDPAKAPPRADVVKGLRSGIMVNI 240

Query: 241 LGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQLRVTVNRQLLP 300
           LGMG+A+LGMQATVG LVAKALT+SA P+YQG S G SPVLALDVFLVQ           
Sbjct: 241 LGMGSALLGMQATVGFLVAKALTTSANPFYQGVSQGYSPVLALDVFLVQ----------- 296

Query: 301 RLVGWIWFRASANTILSHFLGLVFSLELLRSVTLPAAESIPIPRIA 345
                    ASANT+LSHFLGLV SLELLRSVT+P +ES+ +P++A
Sbjct: 301 ---------ASANTLLSHFLGLVCSLELLRSVTVPNSESVVVPKVA 296

[Close]

BLAST of Spg004093 vs. ExPASy TrEMBL
Match: A0A6J1GMQ4 (protein TIC 21, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111455377 PE=4 SV=1)

HSP 1 Score: 486.1 bits (1250), Expect = 1.2e-133
Identity = 274/344 (79.65%), Postives = 280/344 (81.40%), Query Frame = 0


Query: 1   MQSLLSPVARGGAYSAAAVYPSDFHLSRFHRRPFSVRQASILNSPPYSLPSFSAVRSSSS 60
           MQSLLSPV RGG +  AAVY S+ HLS F+RRPFSVR AS L SPP SLPSFSA+R  SS
Sbjct: 1   MQSLLSPVGRGGPFPVAAVYTSELHLSCFNRRPFSVRYASNLKSPPNSLPSFSAIRPPSS 60

Query: 61  SSLLLLKTFGTLEHRRGQFCSETRASSSPISPTVSPNDEAEKAKLAQAACCLVGYLASYC 120
            SLLLLK FGTLEHRRGQFCS+T ASSSPISPTV PNDEAEKAKLAQ             
Sbjct: 61  FSLLLLKNFGTLEHRRGQFCSDTCASSSPISPTVPPNDEAEKAKLAQ------------- 120

Query: 121 YVAVIVKCLCGGLVAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVITGKITSP 180
                        VAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVV+TGKITSP
Sbjct: 121 -------------VAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSP 180

Query: 181 ATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLG 240
           ATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLG
Sbjct: 181 ATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLG 240

Query: 241 MGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQLRVTVNRQLLPRL 300
           MGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQ             
Sbjct: 241 MGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQ------------- 298

Query: 301 VGWIWFRASANTILSHFLGLVFSLELLRSVTLPAAESIPIPRIA 345
                  ASANTILSHFLGLVFSLELLRSVTLPA ESIPIPRIA
Sbjct: 301 -------ASANTILSHFLGLVFSLELLRSVTLPATESIPIPRIA 298

[Close]

BLAST of Spg004093 vs. ExPASy TrEMBL
Match: A0A6J1I5V5 (protein TIC 21, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111470964 PE=4 SV=1)

HSP 1 Score: 479.9 bits (1234), Expect = 8.6e-132
Identity = 270/344 (78.49%), Postives = 279/344 (81.10%), Query Frame = 0


Query: 1   MQSLLSPVARGGAYSAAAVYPSDFHLSRFHRRPFSVRQASILNSPPYSLPSFSAVRSSSS 60
           MQSLLSPV RGG + +AAVY S+ HLS F+RRPFSVR AS L SP  SLPSFSA+R  SS
Sbjct: 1   MQSLLSPVGRGGPFPSAAVYTSELHLSCFNRRPFSVRYASNLKSPHNSLPSFSAIRPPSS 60

Query: 61  SSLLLLKTFGTLEHRRGQFCSETRASSSPISPTVSPNDEAEKAKLAQAACCLVGYLASYC 120
            SLLLLK FG LEHRRGQFCS+TRASSSPISPTV PNDEAEKAKLAQ             
Sbjct: 61  FSLLLLKIFGALEHRRGQFCSDTRASSSPISPTVPPNDEAEKAKLAQ------------- 120

Query: 121 YVAVIVKCLCGGLVAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVITGKITSP 180
                        VAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVV+TGKITSP
Sbjct: 121 -------------VAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSP 180

Query: 181 ATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLG 240
           ATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLG
Sbjct: 181 ATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLG 240

Query: 241 MGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQLRVTVNRQLLPRL 300
           MGAAILGMQATVGLLVAKALTSSAIPYYQG  PGNSPVLALDVFLVQ             
Sbjct: 241 MGAAILGMQATVGLLVAKALTSSAIPYYQGVPPGNSPVLALDVFLVQ------------- 298

Query: 301 VGWIWFRASANTILSHFLGLVFSLELLRSVTLPAAESIPIPRIA 345
                  ASANTILSHFLGLVFSLELLRSVT+PAAESIPIP+IA
Sbjct: 301 -------ASANTILSHFLGLVFSLELLRSVTMPAAESIPIPKIA 298

[Close]

BLAST of Spg004093 vs. ExPASy TrEMBL
Match: A0A6J1D437 (protein TIC 21, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111017409 PE=4 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 2.1e-130
Identity = 272/349 (77.94%), Postives = 280/349 (80.23%), Query Frame = 0


Query: 1   MQSLLSPVARGGAYSAAAVYPSDFHLSRFHRRPFSVRQASILNSPPYSLPSFSAVR---- 60
           MQSLLSPVA  G YSAAAVY SD HLSRFHR P S+R AS LNSPP S+PS +A+R    
Sbjct: 1   MQSLLSPVAPAGPYSAAAVYSSDLHLSRFHRLPLSLRHASNLNSPPNSIPSVNAIRSSYS 60

Query: 61  -SSSSSSLLLLKTFGTLEHRRGQFCSETRASSSPISPTVSPNDEAEKAKLAQAACCLVGY 120
            SSSSSSLL+LK FGTL +RRG FCSETRASSSPISPT  PNDEAEKAKLAQ        
Sbjct: 61  SSSSSSSLLILKAFGTLGNRRGLFCSETRASSSPISPTAPPNDEAEKAKLAQ-------- 120

Query: 121 LASYCYVAVIVKCLCGGLVAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVITG 180
                             VAKRLEKTSRYFKRLGNLGFWGQLVCTIV+AVILSFSVVITG
Sbjct: 121 ------------------VAKRLEKTSRYFKRLGNLGFWGQLVCTIVSAVILSFSVVITG 180

Query: 181 KITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIV 240
           KITSPATFYATAG IVAAFISVFWSFGYIRLSDKL RTANQPSKAPPRADVVNSL+NGIV
Sbjct: 181 KITSPATFYATAGSIVAAFISVFWSFGYIRLSDKLLRTANQPSKAPPRADVVNSLRNGIV 240

Query: 241 VNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQLRVTVNRQ 300
           VNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQ        
Sbjct: 241 VNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQ-------- 300

Query: 301 LLPRLVGWIWFRASANTILSHFLGLVFSLELLRSVTLPAAESIPIPRIA 345
                       ASANTILSHFLGLVFSLELLRSVTLPAAESIPIPRIA
Sbjct: 301 ------------ASANTILSHFLGLVFSLELLRSVTLPAAESIPIPRIA 303

[Close]

BLAST of Spg004093 vs. ExPASy TrEMBL
Match: A0A6J1JKS5 (protein TIC 21, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111486084 PE=4 SV=1)

HSP 1 Score: 463.0 bits (1190), Expect = 1.1e-126
Identity = 270/351 (76.92%), Postives = 278/351 (79.20%), Query Frame = 0


Query: 1   MQSLLSPVARGGAYSAAAVYPSDFHLSRFHRRPFSV--RQASILNSPPYSLPSFSAVR-- 60
           MQSLLSPV R GA+ AAAVY SDFHLS FH RPFSV  RQAS LNSPP SLPSFSA+R  
Sbjct: 1   MQSLLSPVPRTGAFPAAAVYSSDFHLSHFHCRPFSVRGRQASDLNSPPNSLPSFSAIRSS 60

Query: 61  ---SSSSSSLLLLKTFGTLEHRRGQFCSETRASSSPISPTVSPNDEAEKAKLAQAACCLV 120
              SSSSSSLLL KTFGTLEHRRGQFC ETRASSS ISPTV P DEAEK KLAQ      
Sbjct: 61  SSSSSSSSSLLLSKTFGTLEHRRGQFCLETRASSSSISPTVPPIDEAEKLKLAQ------ 120

Query: 121 GYLASYCYVAVIVKCLCGGLVAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVI 180
                               VAKRLEKTSRYFKRLGNLGFWGQLV T+VAAVILSFSVVI
Sbjct: 121 --------------------VAKRLEKTSRYFKRLGNLGFWGQLVLTVVAAVILSFSVVI 180

Query: 181 TGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNG 240
           TGKI SPATFYATAGGIVAAFISVFWSFGYIRLSDKL+RTANQPSKAPPRADVVNSLKNG
Sbjct: 181 TGKIISPATFYATAGGIVAAFISVFWSFGYIRLSDKLRRTANQPSKAPPRADVVNSLKNG 240

Query: 241 IVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQLRVTVN 300
           IV+NLLGMGAAILGMQATVGLLVAKALTSSA PY+Q ASPGNSPVLALDVFLVQ      
Sbjct: 241 IVMNLLGMGAAILGMQATVGLLVAKALTSSATPYFQAASPGNSPVLALDVFLVQ------ 300

Query: 301 RQLLPRLVGWIWFRASANTILSHFLGLVFSLELLRSVTLPAAESIPIPRIA 345
                         ASANTILSHFLGLVFSLELLRSVT+P AESI IP+IA
Sbjct: 301 --------------ASANTILSHFLGLVFSLELLRSVTIPVAESIHIPQIA 305

[Close]

BLAST of Spg004093 vs. ExPASy TrEMBL
Match: A0A5A7SP50 (Protein TIC 21 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00960 PE=4 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 3.2e-126
Identity = 270/352 (76.70%), Postives = 276/352 (78.41%), Query Frame = 0


Query: 1   MQSLLSPVARGGAY-SAAAVYPSDFHLSRFHRRPFSVRQASILNSPPYSLPSFSAV---- 60
           MQSLLSPVAR G +   AAVY SDFHLSR HRRPFSVR +        SLP FSA+    
Sbjct: 1   MQSLLSPVARTGPFPPTAAVYSSDFHLSRLHRRPFSVRHSF------NSLPQFSAISSSS 60

Query: 61  ---RSSSSSSLLLLKTFGTLEHRRGQFCSETRASSSPISPTVSPNDEAEKAKLAQAACCL 120
               SSSSSSLLLLKTFGTLEHRRGQ CSETRASSSPISPTV PNDEAEKAKLAQ     
Sbjct: 61  SSSSSSSSSSLLLLKTFGTLEHRRGQLCSETRASSSPISPTVPPNDEAEKAKLAQ----- 120

Query: 121 VGYLASYCYVAVIVKCLCGGLVAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVV 180
                                VAKRLEKTSRYFKRLG+LGFWGQLVCTIVAAVILSFSVV
Sbjct: 121 ---------------------VAKRLEKTSRYFKRLGSLGFWGQLVCTIVAAVILSFSVV 180

Query: 181 ITGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKN 240
           ITGKI SPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSL+N
Sbjct: 181 ITGKIASPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLRN 240

Query: 241 GIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQLRVTV 300
           GIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQ ASPGNSPVLALDVFLVQ     
Sbjct: 241 GIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQAASPGNSPVLALDVFLVQ----- 300

Query: 301 NRQLLPRLVGWIWFRASANTILSHFLGLVFSLELLRSVTLPAAESIPIPRIA 345
                          ASANTILSHFLGLVFSLELLRSVTLPA +SIPIPRIA
Sbjct: 301 ---------------ASANTILSHFLGLVFSLELLRSVTLPATDSIPIPRIA 300

[Close]

BLAST of Spg004093 vs. TAIR 10
Match: AT2G15290.1 (translocon at inner membrane of chloroplasts 21 )

HSP 1 Score: 300.8 bits (769), Expect = 1.4e-81
Identity = 188/346 (54.34%), Postives = 223/346 (64.45%), Query Frame = 0


Query: 1   MQSLLSPVARGGAYSAAAVYPSDFHLSRFHRRPFSVRQASILNSPPYSLPSFSAVRSSSS 60
           MQSLL P A     SA A+ P   H   F+ +  S R   + N  P  L        SS 
Sbjct: 1   MQSLLLPPASSSGVSAVALRPGFQH--SFNHQSLSTRSLPLFN--PLLLAPKKKTTISSY 60

Query: 61  SSLLLLKTFG-TLEHRRGQFCSETRASSSPISPTVSPND-EAEKAKLAQAACCLVGYLAS 120
            S   L  +G  +   +  F   T A S P SP+  P D E +KAKLAQ           
Sbjct: 61  QSPPSLSVYGFQIGGSKPSFTPSTVAFSYPTSPSSVPGDNEVDKAKLAQ----------- 120

Query: 121 YCYVAVIVKCLCGGLVAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVITGKIT 180
                          VAKRLEKTSRYFKRLG++GFWGQLV T+VAAVILSFS+V+TGK T
Sbjct: 121 ---------------VAKRLEKTSRYFKRLGSIGFWGQLVSTVVAAVILSFSIVVTGKPT 180

Query: 181 SPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNL 240
           SPATFYATA GI AAF+SVFWSFGYIRLS++L+RT+  P+KAPPRADVV  L++GI+VN+
Sbjct: 181 SPATFYATASGIAAAFVSVFWSFGYIRLSERLRRTSIDPAKAPPRADVVKGLRSGIMVNI 240

Query: 241 LGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQLRVTVNRQLLP 300
           LGMG+A+LGMQATVG LVAKALT+SA P+YQG S G SPVLALDVFLVQ           
Sbjct: 241 LGMGSALLGMQATVGFLVAKALTTSANPFYQGVSQGYSPVLALDVFLVQ----------- 296

Query: 301 RLVGWIWFRASANTILSHFLGLVFSLELLRSVTLPAAESIPIPRIA 345
                    ASANT+LSHFLGLV SLELLRSVT+P +ES+ +P++A
Sbjct: 301 ---------ASANTLLSHFLGLVCSLELLRSVTVPNSESVVVPKVA 296

The following BLAST results are available for this feature:

BLAST of Spg004093 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888764.1	2.5e-133	80.00	protein TIC 21, chloroplastic [Benincasa hispida]	[more]
XP_022952785.1	2.5e-133	79.65	protein TIC 21, chloroplastic [Cucurbita moschata]	[more]
KAG6571949.1	1.0e-131	78.49	Protein TIC 21, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >...	[more]
XP_022972396.1	1.8e-131	78.49	protein TIC 21, chloroplastic [Cucurbita maxima]	[more]
XP_023553835.1	3.0e-131	78.49	protein TIC 21, chloroplastic [Cucurbita pepo subsp. pepo]	[more]

BLAST of Spg004093 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SHU7	1.9e-80	54.34	Protein TIC 21, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC21 PE=1 SV=1	[more]

BLAST of Spg004093 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GMQ4	1.2e-133	79.65	protein TIC 21, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111455377 PE=4...	[more]
A0A6J1I5V5	8.6e-132	78.49	protein TIC 21, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111470964 PE=4 S...	[more]
A0A6J1D437	2.1e-130	77.94	protein TIC 21, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111017409 PE=...	[more]
A0A6J1JKS5	1.1e-126	76.92	protein TIC 21, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111486084 P...	[more]
A0A5A7SP50	3.2e-126	76.70	Protein TIC 21 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00960 ...	[more]

BLAST of Spg004093 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G15290.1	1.4e-81	54.34	translocon at inner membrane of chloroplasts 21	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022051	Protein of unknown function DUF3611	PFAM	PF12263	DUF3611	coord: 136..290 e-value: 1.1E-42 score: 145.9
IPR022051	Protein of unknown function DUF3611	PANTHER	PTHR34548	PROTEIN TIC 21, CHLOROPLASTIC	coord: 134..342

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg004093.1	Spg004093.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane