Spg004056 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg004056
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	cysteine-rich and transmembrane domain-containing protein WIH2-like
Location	scaffold4: 2044968 .. 2045994 (+)
RNA-Seq Expression	Spg004056
Synteny	Spg004056

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATAGCTCTCGTAAACTAATACATAAATTCAAACTTCAAATTTCAAAAGAAATAAAAAGAAAAAAAGAAATCGGGACCCAAAGTCATTCTTTTTGCGTATAGTTTTATACTTATAGCTCTCGTCTCTCTGTTTTGAAACTAAGAAAAAATCAATCCGATCGTTCAAGAAATCTCAGAGAGAAAAAGAGACGGAAAAATGAGTTACTACAGTCAGCCACCGCCTCCCGTCGGCGTTCCTCCGCCGCAAGGTAACATCAGAACCAATGCTCTTCGTCTTTCTTGGATTTGCAAGGTCCAAATCGAACGGATCTTGCTGTTTTTTCAGTCAAAATCGATGTACTCTTTGTTTTCGCCTCGCTTTCGCGCTTCGATTTGACTGATTTTTGGCTGCGATTCTGTGAATGTCGATTGAATTTTAGGTTATCCGCCGGGAGGTTATCCGAAGGACGCTTATCCACCGCCAGGATATCCGCCGCAGGGCGGTTATCCTCCTGCCGGTTATCCTCAGCCGGGATATCCGCCTCCGGCGTATGGTCCGGCGTACGGTCAACCTCCGCCTCAACATCAACAACAACAACAGCAACAAGTTGGATTCCTTGAAGGCTGGTAAGTCTCTGCTTCTATTTCGTTTTTTGTGACCTTACTGGCTGCGATTTAAATGGCGTTTTCGAGTTGAAATTGAGTCAATGAGTCTTCACGGCGGCGAAGTGCTCGGTTACGGTTACAGATTCGCTGATTATCGGTCCTTGTGCGGCGGAGATTCTTAGTTTTCGAATTTTTGTTTGCTTTTTTCTTTTTTCTTTTTCTTTTTTGGGAATAAAGATCAATTTTTAATATTAAACTTCATGTTTCTGATCCTTTCTATTTTGATCCTAAACTTTCCATTGCGTCAAATTTAACTTTAAATTTAGACAAATTTTCTAATTACAATTTTTGTTAGTTCCACAAAATTTAGCAAAAAAGCATATAAAAATTCCAATAAATTTGCTAATTTCAATAAAATTAAGTTTTGTACCAAATTAAGTTT

mRNA sequence

ATGAGTTACTACAGTCAGCCACCGCCTCCCGTCGGCGTTCCTCCGCCGCAAGGTTATCCGCCGGGAGGTTATCCGAAGGACGCTTATCCACCGCCAGGATATCCGCCGCAGGGCGGTTATCCTCCTGCCGGTTATCCTCAGCCGGGATATCCGCCTCCGGCGTATGGTCCGGCGTACGGTCAACCTCCGCCTCAACATCAACAACAACAACAGCAACAAGTTGGATTCCTTGAAGGCTGGTAA

Coding sequence (CDS)

ATGAGTTACTACAGTCAGCCACCGCCTCCCGTCGGCGTTCCTCCGCCGCAAGGTTATCCGCCGGGAGGTTATCCGAAGGACGCTTATCCACCGCCAGGATATCCGCCGCAGGGCGGTTATCCTCCTGCCGGTTATCCTCAGCCGGGATATCCGCCTCCGGCGTATGGTCCGGCGTACGGTCAACCTCCGCCTCAACATCAACAACAACAACAGCAACAAGTTGGATTCCTTGAAGGCTGGTAA

Protein sequence

MSYYSQPPPPVGVPPPQGYPPGGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGQPPPQHQQQQQQQVGFLEGW

Homology

[Close]

BLAST of Spg004056 vs. NCBI nr
Match: XP_022148715.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Momordica charantia])

HSP 1 Score: 136.0 bits (341), Expect = 1.5e-28
Identity = 71/79 (89.87%), Postives = 72/79 (91.14%), Query Frame = 0


Query: 1  MSYYSQPPPPVGVPPPQGYPPGGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYG 60
          MSYY+QPPPPVGVPPPQGYPP GYPKDAYPPPGYPPQ GYPP GYP  GYPPPAYGPAYG
Sbjct: 1  MSYYNQPPPPVGVPPPQGYPPEGYPKDAYPPPGYPPQAGYPPPGYPPQGYPPPAYGPAYG 60

Query: 61 QPPPQHQQQQQQQVGFLEG 80
          QPPPQ QQQQQQ VGFLEG
Sbjct: 61 QPPPQ-QQQQQQSVGFLEG 78

[Close]

BLAST of Spg004056 vs. NCBI nr
Match: XP_022927665.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita moschata] >XP_022989028.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita maxima] >KAG6588716.1 hypothetical protein SDJN03_17281, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022504.1 hypothetical protein SDJN02_16236 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 134.4 bits (337), Expect = 4.3e-28
Identity = 69/79 (87.34%), Postives = 74/79 (93.67%), Query Frame = 0


Query: 1  MSYYSQPPPPVGVPPPQGYPPGGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYG 60
          MSYY+QPPPPVGVPPPQGYPP GYPKDAYPPPG+PP  GYPPAGYPQ GYPPPAYGPAYG
Sbjct: 1  MSYYNQPPPPVGVPPPQGYPPEGYPKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYG 60

Query: 61 QPPPQHQQQQQQQVGFLEG 80
          QPPPQ+ QQQ+Q+VGFLEG
Sbjct: 61 QPPPQY-QQQRQEVGFLEG 78

[Close]

BLAST of Spg004056 vs. NCBI nr
Match: XP_023529875.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 132.9 bits (333), Expect = 1.2e-27
Identity = 68/79 (86.08%), Postives = 74/79 (93.67%), Query Frame = 0


Query: 1  MSYYSQPPPPVGVPPPQGYPPGGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYG 60
          MSY++QPPPPVGVPPPQGYPP GYPKDAYPPPG+PP  GYPPAGYPQ GYPPPAYGPAYG
Sbjct: 1  MSYFNQPPPPVGVPPPQGYPPEGYPKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYG 60

Query: 61 QPPPQHQQQQQQQVGFLEG 80
          QPPPQ+ QQQ+Q+VGFLEG
Sbjct: 61 QPPPQY-QQQRQEVGFLEG 78

[Close]

BLAST of Spg004056 vs. NCBI nr
Match: KAG7011598.1 (hypothetical protein SDJN02_26504, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 125.6 bits (314), Expect = 2.0e-25
Identity = 66/81 (81.48%), Postives = 71/81 (87.65%), Query Frame = 0


Query: 1  MSYYSQPPPPVGVPPPQGYPPGGY-PKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAY 60
          MSYY+QPPPPVGVPPPQGYPP GY PKDAYPP GYPPQGGYPPAGYP  GYPPPAYGPAY
Sbjct: 1  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPAYGPAY 60

Query: 61 GQPPPQHQQQQQQQVGFLEGW 81
          G P PQH   Q+++VGF+EGW
Sbjct: 61 GPPQPQH-SNQKKEVGFVEGW 80

[Close]

BLAST of Spg004056 vs. NCBI nr
Match: XP_023553865.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 124.4 bits (311), Expect = 4.4e-25
Identity = 66/80 (82.50%), Postives = 71/80 (88.75%), Query Frame = 0


Query: 1  MSYYSQPPPPVGVPPPQGYPPGGY-PKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAY 60
          MSYY+QPPPPVGVPPPQGYPP GY PKDAYPPPGYPPQGGYPPAGYP  GYPPPAYGPAY
Sbjct: 1  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAGYPPQGYPPPAYGPAY 60

Query: 61 GQPPPQHQQQQQQQVGFLEG 80
          G P PQH   Q+++VGF+EG
Sbjct: 61 GPPQPQH-SNQKKEVGFVEG 79

[Close]

BLAST of Spg004056 vs. ExPASy Swiss-Prot
Match: Q8S8M0 (Cysteine-rich and transmembrane domain-containing protein WIH2 OS=Arabidopsis thaliana OX=3702 GN=WIH2 PE=1 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 2.2e-19
Identity = 62/87 (71.26%), Postives = 63/87 (72.41%), Query Frame = 0


Query: 1  MSYYSQPPPPVGVPPPQGYPPGGYPKDAYPPPGYPPQG----GYPPAGYPQPGYP----P 60
          MS Y+Q  PPVGVPPPQGYPP GYPKDAYPP GYPPQG    GYPP GYPQ GYP    P
Sbjct: 1  MSQYNQ--PPVGVPPPQGYPPEGYPKDAYPPQGYPPQGYPQQGYPPQGYPQQGYPQQGYP 60

Query: 61 PAYGPAYGQPPPQHQQQQQQQVGFLEG 80
          P Y P Y  PPPQHQQQQ    GFLEG
Sbjct: 61 PPYAPQY-PPPPQHQQQQSSP-GFLEG 83

[Close]

BLAST of Spg004056 vs. ExPASy Swiss-Prot
Match: Q8LCL8 (Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thaliana OX=3702 GN=At3g57160 PE=3 SV=2)

HSP 1 Score: 66.2 bits (160), Expect = 1.9e-10
Identity = 50/85 (58.82%), Postives = 51/85 (60.00%), Query Frame = 0


Query: 5  SQPPPPVGVPPPQGYPPGGYPKDAYPPPG--YPPQGGYPPAGYPQPGYPPPAYG----PA 64
          SQ PP VGVPP   YP  G PKDAYPPPG  YP QG  PP GYPQ GYPP  Y     P 
Sbjct: 2  SQQPPAVGVPPSHAYPAEGPPKDAYPPPGQPYPQQGYPPPQGYPQQGYPPQGYPPQGYPE 61

Query: 65 YGQP----PPQHQQQQQQQVGFLEG 80
           G P    PPQ QQQQ+   G LEG
Sbjct: 62 QGYPQQGYPPQQQQQQKHSPGMLEG 86

[Close]

BLAST of Spg004056 vs. ExPASy Swiss-Prot
Match: Q9FJW3 (Cysteine-rich and transmembrane domain-containing protein WIH1 OS=Arabidopsis thaliana OX=3702 GN=WIH1 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.0e-08
Identity = 46/78 (58.97%), Postives = 48/78 (61.54%), Query Frame = 0


Query: 4  YSQPPPPVGVPPPQGYPPGGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGQPP 63
          Y Q   PVG PPPQGYP    PKD YPP GYPP  GYPP GY Q GY      PA G PP
Sbjct: 2  YHQEQHPVGAPPPQGYP----PKDGYPPAGYPP-AGYPPPGYAQ-GY------PAQGYPP 61

Query: 64 PQHQQ--QQQQQVGFLEG 80
          PQ+ Q  QQ+Q  G LEG
Sbjct: 62 PQYSQAPQQKQNAGMLEG 67

[Close]

BLAST of Spg004056 vs. ExPASy Swiss-Prot
Match: Q17094 (Rhodopsin (Fragment) OS=Alloteuthis subulata OX=54069 GN=RHO PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 7.4e-07
Identity = 35/51 (68.63%), Postives = 35/51 (68.63%), Query Frame = 0


Query: 15  PPQGYPPGGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGQPPPQ 66
           PPQGYPP GYP    PP GYPPQ GYPP GYP  GYPPP  GP    PPPQ
Sbjct: 384 PPQGYPPQGYPPP--PPQGYPPQ-GYPPQGYPPQGYPPPPQGPPPQGPPPQ 431

[Close]

BLAST of Spg004056 vs. ExPASy Swiss-Prot
Match: P24603 (Rhodopsin OS=Loligo forbesii OX=6618 GN=RHO PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 7.4e-07
Identity = 35/51 (68.63%), Postives = 35/51 (68.63%), Query Frame = 0


Query: 15  PPQGYPPGGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGQPPPQ 66
           PPQGYPP GYP    PP GYPPQ GYPP GYP  GYPPP  GP    PPPQ
Sbjct: 391 PPQGYPPQGYPPP--PPQGYPPQ-GYPPQGYPPQGYPPPPQGPPPQGPPPQ 438

[Close]

BLAST of Spg004056 vs. ExPASy TrEMBL
Match: A0A6J1D3P4 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Momordica charantia OX=3673 GN=LOC111017311 PE=3 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 7.1e-29
Identity = 71/79 (89.87%), Postives = 72/79 (91.14%), Query Frame = 0


Query: 1  MSYYSQPPPPVGVPPPQGYPPGGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYG 60
          MSYY+QPPPPVGVPPPQGYPP GYPKDAYPPPGYPPQ GYPP GYP  GYPPPAYGPAYG
Sbjct: 1  MSYYNQPPPPVGVPPPQGYPPEGYPKDAYPPPGYPPQAGYPPPGYPPQGYPPPAYGPAYG 60

Query: 61 QPPPQHQQQQQQQVGFLEG 80
          QPPPQ QQQQQQ VGFLEG
Sbjct: 61 QPPPQ-QQQQQQSVGFLEG 78

[Close]

BLAST of Spg004056 vs. ExPASy TrEMBL
Match: A0A6J1JP18 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita maxima OX=3661 GN=LOC111486213 PE=3 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.1e-28
Identity = 69/79 (87.34%), Postives = 74/79 (93.67%), Query Frame = 0


Query: 1  MSYYSQPPPPVGVPPPQGYPPGGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYG 60
          MSYY+QPPPPVGVPPPQGYPP GYPKDAYPPPG+PP  GYPPAGYPQ GYPPPAYGPAYG
Sbjct: 1  MSYYNQPPPPVGVPPPQGYPPEGYPKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYG 60

Query: 61 QPPPQHQQQQQQQVGFLEG 80
          QPPPQ+ QQQ+Q+VGFLEG
Sbjct: 61 QPPPQY-QQQRQEVGFLEG 78

[Close]

BLAST of Spg004056 vs. ExPASy TrEMBL
Match: A0A6J1EPM1 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita moschata OX=3662 GN=LOC111434485 PE=3 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.1e-28
Identity = 69/79 (87.34%), Postives = 74/79 (93.67%), Query Frame = 0


Query: 1  MSYYSQPPPPVGVPPPQGYPPGGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYG 60
          MSYY+QPPPPVGVPPPQGYPP GYPKDAYPPPG+PP  GYPPAGYPQ GYPPPAYGPAYG
Sbjct: 1  MSYYNQPPPPVGVPPPQGYPPEGYPKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYG 60

Query: 61 QPPPQHQQQQQQQVGFLEG 80
          QPPPQ+ QQQ+Q+VGFLEG
Sbjct: 61 QPPPQY-QQQRQEVGFLEG 78

[Close]

BLAST of Spg004056 vs. ExPASy TrEMBL
Match: A0A6J1GJV9 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita moschata OX=3662 GN=LOC111454944 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.8e-24
Identity = 65/80 (81.25%), Postives = 70/80 (87.50%), Query Frame = 0


Query: 1  MSYYSQPPPPVGVPPPQGYPPGGY-PKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAY 60
          MSYY+QPPPPVGVPPPQGYPP GY PKDAYPP GYPPQGGYPPAGYP  GYPPPAYGPAY
Sbjct: 1  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPAYGPAY 60

Query: 61 GQPPPQHQQQQQQQVGFLEG 80
          G P PQH   Q+++VGF+EG
Sbjct: 61 GPPQPQH-SNQKKEVGFVEG 79

[Close]

BLAST of Spg004056 vs. ExPASy TrEMBL
Match: A0A5A7SME1 (Cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001290 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 6.9e-24
Identity = 65/82 (79.27%), Postives = 71/82 (86.59%), Query Frame = 0


Query: 2  SYYSQPPPPVGVPPPQGYPPGGY-PKDAYPPPGYPPQGGYPPAGYPQPGYPP-PAYGPAY 61
          SYY+QPPPPVGVPPPQGYPP GY PKDAYPP GYPPQGGYPPAGYP  GYPP P YGPAY
Sbjct: 3  SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPQPPYGPAY 62

Query: 62 -GQPPPQHQQQQQQQVGFLEGW 81
           G PPPQ+Q  Q+++VGF+EGW
Sbjct: 63 GGHPPPQYQNNQKKEVGFVEGW 84

[Close]

BLAST of Spg004056 vs. TAIR 10
Match: AT2G41420.1 (proline-rich family protein )

HSP 1 Score: 95.9 bits (237), Expect = 1.6e-20
Identity = 62/87 (71.26%), Postives = 63/87 (72.41%), Query Frame = 0


Query: 1  MSYYSQPPPPVGVPPPQGYPPGGYPKDAYPPPGYPPQG----GYPPAGYPQPGYP----P 60
          MS Y+Q  PPVGVPPPQGYPP GYPKDAYPP GYPPQG    GYPP GYPQ GYP    P
Sbjct: 1  MSQYNQ--PPVGVPPPQGYPPEGYPKDAYPPQGYPPQGYPQQGYPPQGYPQQGYPQQGYP 60

Query: 61 PAYGPAYGQPPPQHQQQQQQQVGFLEG 80
          P Y P Y  PPPQHQQQQ    GFLEG
Sbjct: 61 PPYAPQY-PPPPQHQQQQSSP-GFLEG 83

[Close]

BLAST of Spg004056 vs. TAIR 10
Match: AT3G49845.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 60.8 bits (146), Expect = 5.6e-10
Identity = 49/107 (45.79%), Postives = 56/107 (52.34%), Query Frame = 0


Query: 4   YSQPPPPVGVPPPQGYPP-GGYPKDAYPPP-GYP----PQGGYPPAGYPQP--------- 63
           Y  P  PV  PPPQGYPP  GYP   YPPP GYP    PQ GYPPAGYP P         
Sbjct: 3   YQDPQHPVSAPPPQGYPPKEGYPPAGYPPPAGYPPPQYPQAGYPPAGYPPPQQGYGQGYP 62

Query: 64  --GYPPPAY--------------GPAYGQPPPQHQQQQQQQVGFLEG 80
             GYPPP Y               P YGQ PP++++ ++   GF+EG
Sbjct: 63  AQGYPPPQYPQGHPPQYPYQGPPPPHYGQAPPKNKKDKKDSGGFMEG 109

[Close]

BLAST of Spg004056 vs. TAIR 10
Match: AT5G67600.1 (unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49845.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 60.5 bits (145), Expect = 7.3e-10
Identity = 46/78 (58.97%), Postives = 48/78 (61.54%), Query Frame = 0


Query: 4  YSQPPPPVGVPPPQGYPPGGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGQPP 63
          Y Q   PVG PPPQGYP    PKD YPP GYPP  GYPP GY Q GY      PA G PP
Sbjct: 2  YHQEQHPVGAPPPQGYP----PKDGYPPAGYPP-AGYPPPGYAQ-GY------PAQGYPP 61

Query: 64 PQHQQ--QQQQQVGFLEG 80
          PQ+ Q  QQ+Q  G LEG
Sbjct: 62 PQYSQAPQQKQNAGMLEG 67

[Close]

BLAST of Spg004056 vs. TAIR 10
Match: AT5G45350.1 (proline-rich family protein )

HSP 1 Score: 47.8 bits (112), Expect = 4.9e-06
Identity = 37/66 (56.06%), Postives = 38/66 (57.58%), Query Frame = 0


Query: 9  PPVGVPPPQGYPPGGYPKDAYPPP--GYPPQGGYPPAGYPQP--GYPP-PAYG-----PA 65
          PP G PPP  YPP GYP+  YPPP   YPP  GYPP  YP    GYPP P YG     P 
Sbjct: 17 PPAGYPPPGAYPPAGYPQQGYPPPPGAYPP-AGYPPGAYPPAPGGYPPAPGYGGYPPAPG 76

[Close]

BLAST of Spg004056 vs. TAIR 10
Match: AT5G45350.2 (proline-rich family protein )

HSP 1 Score: 47.8 bits (112), Expect = 4.9e-06
Identity = 37/66 (56.06%), Postives = 38/66 (57.58%), Query Frame = 0


Query: 9  PPVGVPPPQGYPPGGYPKDAYPPP--GYPPQGGYPPAGYPQP--GYPP-PAYG-----PA 65
          PP G PPP  YPP GYP+  YPPP   YPP  GYPP  YP    GYPP P YG     P 
Sbjct: 17 PPAGYPPPGAYPPAGYPQQGYPPPPGAYPP-AGYPPGAYPPAPGGYPPAPGYGGYPPAPG 76

The following BLAST results are available for this feature:

BLAST of Spg004056 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148715.1	1.5e-28	89.87	cysteine-rich and transmembrane domain-containing protein WIH2-like [Momordica c...	[more]
XP_022927665.1	4.3e-28	87.34	cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita m...	[more]
XP_023529875.1	1.2e-27	86.08	cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita p...	[more]
KAG7011598.1	2.0e-25	81.48	hypothetical protein SDJN02_26504, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023553865.1	4.4e-25	82.50	cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita p...	[more]

BLAST of Spg004056 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S8M0	2.2e-19	71.26	Cysteine-rich and transmembrane domain-containing protein WIH2 OS=Arabidopsis th...	[more]
Q8LCL8	1.9e-10	58.82	Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thali...	[more]
Q9FJW3	1.0e-08	58.97	Cysteine-rich and transmembrane domain-containing protein WIH1 OS=Arabidopsis th...	[more]
Q17094	7.4e-07	68.63	Rhodopsin (Fragment) OS=Alloteuthis subulata OX=54069 GN=RHO PE=3 SV=1	[more]
P24603	7.4e-07	68.63	Rhodopsin OS=Loligo forbesii OX=6618 GN=RHO PE=2 SV=1	[more]

BLAST of Spg004056 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D3P4	7.1e-29	89.87	cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Momordica...	[more]
A0A6J1JP18	2.1e-28	87.34	cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita...	[more]
A0A6J1EPM1	2.1e-28	87.34	cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita...	[more]
A0A6J1GJV9	1.8e-24	81.25	cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita...	[more]
A0A5A7SME1	6.9e-24	79.27	Cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo...	[more]

BLAST of Spg004056 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G41420.1	1.6e-20	71.26	proline-rich family protein	[more]
AT3G49845.1	5.6e-10	45.79	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G67600.1	7.3e-10	58.97	unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures;...	[more]
AT5G45350.1	4.9e-06	56.06	proline-rich family protein	[more]
AT5G45350.2	4.9e-06	56.06	proline-rich family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..80
None	No IPR available	PANTHER	PTHR31568:SF75	SUBFAMILY NOT NAMED	coord: 1..79
IPR044850	Cysteine-rich and transmembrane domain-containing protein WIH1/2-like	PANTHER	PTHR31568	RCG49325, ISOFORM CRA_A	coord: 1..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg004056.1	Spg004056.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane