Spg004022 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg004022
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDNA helicase
Locationscaffold4: 2863069 .. 2866627 (-)
RNA-Seq ExpressionSpg004022
SyntenySpg004022
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGCAAGTGACGTGTCGACGGCGACTTGCAAATCATGGACGGGGCGAGCTGGTGGTCGACGACGACTTGGAGGTGCGAGCGTTCGGATGCAGGTGCGAGGTCGTGCTCTGTTGTTGCGGGTCTCTGGGTCACGAACGAAGCAACTGGGTTTTTTTTTTTTTTTTTTTCAAGACTGATGTGAGATAATCGACTGGGTCTGAGATGCTACTTATCGCACGACTGGGCTGAGATAATCGACGGCGTCGTCTGATGTGTGGAGGCGGCGTGACGGCGTAAGAAGCACCAGTATGGCAGTGGCGGTAAAAAGGACCACCCAACGCTGGAAGTAAGGTGCACCAATTAAGAATGGCGGCTAGGGTTCCGGCGACGGCGGCTAGGGTTTTTAGGGTTTTTTGAGACGGCTAGGGTTTAAACCTGCTCTGATACCATCTTGATTTTGAGAGTTTAAAATTATTCTCATGTATTTAATATGTGCAATATAAGTCCTCTTATATAGGAGAAAGACCTATTACAAATATGGAAGGGAATAAAAGCAATAAAGAGCAAATATTTTACAATAAAGATTTACACAAATATTCCAACATTATGCTATGTGAGAAATTATTAGATGACAACTATTCTTTCTCATTTTGAGGGCTCTCCCTCTCCTTCATTAGGGTTTTGTCATCCTTTGTTTGGTAGGGAAATGACGAATATTATGGACCTTTTGTATTTGCTTGGGATGTTCGTACATGGGGTCTAAGTTCGTTCGATGGTTTCTCTTATAGATCCTACTTTCGGTGTTTGGTGATTCTTCTCTTTTGAGTGGATCTGTCTTTACCTTGTCATGGAAGATGAAAATTTCCAAGAAGGTTAGGTTTTTATGTGATTGTTCTTTCACAGAAGAGCAAACACCTTGGATTGGATTTTGAAGAAGTTGCCCAACTTGATAGGGCTAACATGTTGCCTTCTTTGTAGGAAGGTGATGGAGGATCTTGATCATATTCTTTGGAGTTGTGATTTTGCTTGTGCAGTCCGAAGTTGTTTCTTTGAGGTGTTTGGCTTATGCTTGGCCTAGCGCGAGTTTCTTCCTTATTTGCATTTTCATGATAGGAAGGTTTTTATGGCGAGTCGGAGTGTGTTGTTTTGTGGACTTCTATGTTTCTCTTTGGGCTTTGGTGGCAAAGACTTTGAATAATTATCCTTTTGGTCTCATTTTACTTGATTGGAGTCCCTTTTTATTGTTTCGCTCCTTTTCTTTCTTTTCCTTCTTCTTCTTTTTTTTTTTTTTAGGTTTTTTATTTTGTATGCCTTCGTATTCTTTTAATTTTTTCTCAATTAAAGCTTTCACGATTCATAGAAAAAGAACACAACTTTATCACAAGCATTTAATATGAATGCCTTGTTCAGACTTCCACCCCACCCAAGCCACATGCGACATATCATCGGGTTCCTCTTATGTCAACTCACAATTGTTTTTTCTTTTTTAAAGCAAGATAGCACTTTTCATTCAGAAACATTATAAAGAAAAACCAAGGAGTTACATCAAGGTTCTCCAATTAGTCACTAAAGCTGAAAAAAGAAATAATTAGAAAAGGGTCTAGGTTGAAGAGCCCAAAGCACCAGCATTTAAACTTGAAACGCTTCATTATGCAATATTAGATATTTATAGTTATATTTGGAGTTCATCTGTCAGGTACTGGAAAGTCACAGTTCTTGAAATTTGCTGCCAAATTGAGCAACCGAGCTGTTATTACCACTGGATTAGGAAGCACTAGTGCCGGACTAACTGTTGCTGCTGTCAAGGATGGAGGTACCTTTCAAAACTTTTTCCTTTTTATTGATATTGATTGATGTGCAGAATCAAGTTCATTTTTATTGGTCACTTTTCTTGGAAAGTAAATGCAATAAAAAGAATTATATCATAGTGAAGGAGAAATGTAAACATCAAGAACTCCTACGAAACCTTTTATACAAAATCATCCTTTTGTTTTCTGTTTCCGTGACCAACTTGGTAGATTGTCGTACCCTTACTTTTTCCTTTTCTTCCCTTTGCGAAGGGATTGTTCGGTTTCTACAAAACTTGGAGCTAAGATGAAGCATCCTTTATCCGATGTGCCTTTATTATCCTGAAGGTGAAGTATCTCAAACCATTATCGGTTTCTCCTTCGCAAATGAGCGATGCTTATAGTTCTGCTCCCATTTGCGTAGGACTTCTAATGCTAAATAAAGAACCTGGAGCAGTAAATGCTCAAACTCAAACTGAGGAATGTCAGTTTAGGACGGAAAGAAGGGAGGTTCGTTGTTCGAGTCTAACCCGTCTGAGGGTTTCTCTTGTGGGTCCCTTTTTCGTTGGTTGCTTAACCTTTCTCCCCGAGTCCATTTTTTCTCTTCTGTGGAAGGTGAAAATTCTAAAGAAGATAAGGTTCTTTATCAGACAAGTTATCCACGGAAGAGTTAAATGATTGACAAACTTTCGAGGAAGATGCCCTTGTTAGTAGTAGGGGTGTTCAAAATTAGACAAAAAACCGACTCGACCGACCGTCGGTTCGGTCAGTTTTTTGCTAGATTCGGTTGGAGTCGGTCGGTCGGTTCAACCAAAAATTGAAAAAACCGACCAACCGACCGACCGACAATAATATATTAAAAAAAAATTTGTTCTGCCCGAGTCTGCTAACATCACGCGCACACTGCGGAGTGTGTAGTCTTTTCAACCATCTTTTCAACTCTTTTCAGAGTTGCTTTTTCAAAAAGTAATGATTACTTTTTTAGTTTTTATTATTTTTTTATTCTTCTCTCTTTCCTTGTTGTCTTTTCTCCTTCCCCTTTTCTTTCATTTCACAGAAATACCTCTCTCTCCTTCCCTCTTTTCTTTCTCTTTCCTTTCTCACTTGAACTCTTTCTCTTCTTCTTTCTTTTTTTTTTCTCTTTCTTTCTTCTTCATCTAATCTCCTCTTCCTACCGATTTCTTTCTCTCTCTCTCTTCTCCTTCCATTTCTTTCTCATTCTCTCCTTTTCATTCTTTGGCGTTGGCGGACTCAGCACACCAAGACGACTTTCGCTTTCTTTCTTCTCTCTTTTCTTTTTCTTCTATATTAATCTTTCTTTCTTTCTTCTTTCCCTCTCTTTCTTTTTTCCTCTTTTTTCTTCCTTTTTTTTCCTCCTCCCCATGCTTCAAACCCTCGCCAAACTTCCCACAACAAAATCCCATCTCAAGTCGGAAAACCGAAAAAATTGACCGACCGATCGTGTATTTGGTTGGTCAGTTTCAGAGAGCAATTCAAAACTTCCGACCACCGACCGACTGAAACCGATAGGTCGGTTTTCGGCGTCGGTTTTTGCCCAAAACCGACTCCGACCGACCGACGAACAACCCTAGTTAGTAGGTCCATTTTGTTGCATCCTATGTCAGAGGGCGGAGGAAGATCTGGATGATATCCTTTGGAGTTGTGATTTTGTCTGGTCTATATGGGGTTTGTTCTTTGATGCGTTCGGGTTGCAGGTTAGGAGTTTCAGTGACTACAGGGAGATGATCCGGGGAGTTCCTCATCCATTTGCCGTTTCGCGAGATGGATAG

mRNA sequence

ATGAGGCAAGTGACGTGTCGACGGCGACTTGCAAATCATGGACGGGGCGAGCTGGTGGTCGACGACGACTTGGAGGTGCGAGCGTTCGGATGCAGGAAGGTGATGGAGGATCTTGATCATATTCTTTGGAGTTGTGATTTTGCTTGTGCAGTCCGAAGTTGTACTGGAAAGTCACAGTTCTTGAAATTTGCTGCCAAATTGAGCAACCGAGCTGTTATTACCACTGGATTAGGAAGCACTAGTGCCGGACTAACTGTTGCTGCTGTCAAGGATGGAGGACTTCTAATGCTAAATAAAGAACCTGGAGCAGTAAATGCTCAAACTCAAACTGAGGAATGTCAGTTTAGGACGGAAAGAAGGGAGAGGGCGGAGGAAGATCTGGATGATATCCTTTGGAGTTGTGATTTTGTCTGGTCTATATGGGGTTTGTTCTTTGATGCGTTCGGGTTGCAGGTTAGGAGTTTCAGTGACTACAGGGAGATGATCCGGGGAGTTCCTCATCCATTTGCCGTTTCGCGAGATGGATAG

Coding sequence (CDS)

ATGAGGCAAGTGACGTGTCGACGGCGACTTGCAAATCATGGACGGGGCGAGCTGGTGGTCGACGACGACTTGGAGGTGCGAGCGTTCGGATGCAGGAAGGTGATGGAGGATCTTGATCATATTCTTTGGAGTTGTGATTTTGCTTGTGCAGTCCGAAGTTGTACTGGAAAGTCACAGTTCTTGAAATTTGCTGCCAAATTGAGCAACCGAGCTGTTATTACCACTGGATTAGGAAGCACTAGTGCCGGACTAACTGTTGCTGCTGTCAAGGATGGAGGACTTCTAATGCTAAATAAAGAACCTGGAGCAGTAAATGCTCAAACTCAAACTGAGGAATGTCAGTTTAGGACGGAAAGAAGGGAGAGGGCGGAGGAAGATCTGGATGATATCCTTTGGAGTTGTGATTTTGTCTGGTCTATATGGGGTTTGTTCTTTGATGCGTTCGGGTTGCAGGTTAGGAGTTTCAGTGACTACAGGGAGATGATCCGGGGAGTTCCTCATCCATTTGCCGTTTCGCGAGATGGATAG

Protein sequence

MRQVTCRRRLANHGRGELVVDDDLEVRAFGCRKVMEDLDHILWSCDFACAVRSCTGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAVNAQTQTEECQFRTERRERAEEDLDDILWSCDFVWSIWGLFFDAFGLQVRSFSDYREMIRGVPHPFAVSRDG
Homology
[Close]
BLAST of Spg004022 vs. NCBI nr
Match: XP_008455167.1 (PREDICTED: probable DNA helicase MCM9 isoform X1 [Cucumis melo])

HSP 1 Score: 77.0 bits (188), Expect = 1.8e-10
Identity = 44/50 (88.00%), Postives = 45/50 (90.00%), Query Frame = 0 

Query: 55  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV 105
           TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGG  ML  E GA+
Sbjct: 364 TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGEWML--EAGAL 411

[Close]
BLAST of Spg004022 vs. NCBI nr
Match: XP_016901680.1 (PREDICTED: probable DNA helicase MCM9 isoform X2 [Cucumis melo])

HSP 1 Score: 77.0 bits (188), Expect = 1.8e-10
Identity = 44/50 (88.00%), Postives = 45/50 (90.00%), Query Frame = 0 

Query: 55  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV 105
           TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGG  ML  E GA+
Sbjct: 363 TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGEWML--EAGAL 410

[Close]
BLAST of Spg004022 vs. NCBI nr
Match: XP_008455168.1 (PREDICTED: probable DNA helicase MCM9 isoform X3 [Cucumis melo])

HSP 1 Score: 77.0 bits (188), Expect = 1.8e-10
Identity = 44/50 (88.00%), Postives = 45/50 (90.00%), Query Frame = 0 

Query: 55  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV 105
           TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGG  ML  E GA+
Sbjct: 358 TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGEWML--EAGAL 405

[Close]
BLAST of Spg004022 vs. NCBI nr
Match: XP_008455169.1 (PREDICTED: probable DNA helicase MCM9 isoform X4 [Cucumis melo])

HSP 1 Score: 77.0 bits (188), Expect = 1.8e-10
Identity = 44/50 (88.00%), Postives = 45/50 (90.00%), Query Frame = 0 

Query: 55  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV 105
           TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGG  ML  E GA+
Sbjct: 353 TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGEWML--EAGAL 400

[Close]
BLAST of Spg004022 vs. NCBI nr
Match: XP_022952902.1 (probable DNA helicase MCM9 isoform X2 [Cucurbita moschata] >KAG6571851.1 putative DNA helicase MCM9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 77.0 bits (188), Expect = 1.8e-10
Identity = 44/50 (88.00%), Postives = 45/50 (90.00%), Query Frame = 0 

Query: 55  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV 105
           TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGG  ML  E GA+
Sbjct: 363 TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGEWML--EAGAL 410

[Close]
BLAST of Spg004022 vs. ExPASy Swiss-Prot
Match: F4IFF3 (Probable DNA helicase MCM9 OS=Arabidopsis thaliana OX=3702 GN=MCM9 PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 6.7e-13
Identity = 43/50 (86.00%), Postives = 44/50 (88.00%), Query Frame = 0 

Query: 55  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV 105
           TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTV AVKDGG  ML  E GA+
Sbjct: 362 TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVTAVKDGGEWML--EAGAL 409

[Close]
BLAST of Spg004022 vs. ExPASy Swiss-Prot
Match: B8B406 (Probable DNA helicase MCM9 OS=Oryza sativa subsp. indica OX=39946 GN=MCM9 PE=3 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.5e-12
Identity = 42/50 (84.00%), Postives = 44/50 (88.00%), Query Frame = 0 

Query: 55  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV 105
           TGKSQFLKFAAKLSNR+VITTGLGSTSAGLTV AVKDGG  ML  E GA+
Sbjct: 372 TGKSQFLKFAAKLSNRSVITTGLGSTSAGLTVTAVKDGGEWML--EAGAL 419

[Close]
BLAST of Spg004022 vs. ExPASy Swiss-Prot
Match: Q69QA6 (Probable DNA helicase MCM9 OS=Oryza sativa subsp. japonica OX=39947 GN=MCM9 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.5e-12
Identity = 42/50 (84.00%), Postives = 44/50 (88.00%), Query Frame = 0 

Query: 55  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV 105
           TGKSQFLKFAAKLSNR+VITTGLGSTSAGLTV AVKDGG  ML  E GA+
Sbjct: 372 TGKSQFLKFAAKLSNRSVITTGLGSTSAGLTVTAVKDGGEWML--EAGAL 419

[Close]
BLAST of Spg004022 vs. ExPASy Swiss-Prot
Match: F1N2W9 (DNA helicase MCM9 OS=Bos taurus OX=9913 GN=MCM9 PE=3 SV=2)

HSP 1 Score: 62.8 bits (151), Expect = 4.5e-09
Identity = 34/50 (68.00%), Postives = 41/50 (82.00%), Query Frame = 0 

Query: 55  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV 105
           TGKSQFLK+AAK++ R+V+TTG+GSTSAGLTV AVKD G    N E GA+
Sbjct: 355 TGKSQFLKYAAKITPRSVLTTGIGSTSAGLTVTAVKDSG--EWNLEAGAL 402

[Close]
BLAST of Spg004022 vs. ExPASy Swiss-Prot
Match: Q9NXL9 (DNA helicase MCM9 OS=Homo sapiens OX=9606 GN=MCM9 PE=1 SV=4)

HSP 1 Score: 62.8 bits (151), Expect = 4.5e-09
Identity = 34/50 (68.00%), Postives = 41/50 (82.00%), Query Frame = 0 

Query: 55  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV 105
           TGKSQFLK+AAK++ R+V+TTG+GSTSAGLTV AVKD G    N E GA+
Sbjct: 356 TGKSQFLKYAAKITPRSVLTTGIGSTSAGLTVTAVKDSG--EWNLEAGAL 403

[Close]
BLAST of Spg004022 vs. ExPASy TrEMBL
Match: A0A6J1GLI2 (DNA helicase OS=Cucurbita moschata OX=3662 GN=LOC111455445 PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 8.6e-11
Identity = 44/50 (88.00%), Postives = 45/50 (90.00%), Query Frame = 0 

Query: 55  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV 105
           TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGG  ML  E GA+
Sbjct: 364 TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGEWML--EAGAL 411

[Close]
BLAST of Spg004022 vs. ExPASy TrEMBL
Match: A0A6J1I3C7 (DNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111470623 PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 8.6e-11
Identity = 44/50 (88.00%), Postives = 45/50 (90.00%), Query Frame = 0 

Query: 55  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV 105
           TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGG  ML  E GA+
Sbjct: 363 TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGEWML--EAGAL 410

[Close]
BLAST of Spg004022 vs. ExPASy TrEMBL
Match: A0A6J1I4M2 (DNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111470623 PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 8.6e-11
Identity = 44/50 (88.00%), Postives = 45/50 (90.00%), Query Frame = 0 

Query: 55  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV 105
           TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGG  ML  E GA+
Sbjct: 364 TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGEWML--EAGAL 411

[Close]
BLAST of Spg004022 vs. ExPASy TrEMBL
Match: A0A5D3C4S8 (DNA helicase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G002190 PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 8.6e-11
Identity = 44/50 (88.00%), Postives = 45/50 (90.00%), Query Frame = 0 

Query: 55  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV 105
           TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGG  ML  E GA+
Sbjct: 170 TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGEWML--EAGAL 217

[Close]
BLAST of Spg004022 vs. ExPASy TrEMBL
Match: A0A5A7SLG2 (DNA helicase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G002160 PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 8.6e-11
Identity = 44/50 (88.00%), Postives = 45/50 (90.00%), Query Frame = 0 

Query: 55  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV 105
           TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGG  ML  E GA+
Sbjct: 311 TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGEWML--EAGAL 358

[Close]
BLAST of Spg004022 vs. TAIR 10
Match: AT2G14050.1 (minichromosome maintenance 9 )

HSP 1 Score: 75.5 bits (184), Expect = 4.8e-14
Identity = 43/50 (86.00%), Postives = 44/50 (88.00%), Query Frame = 0 

Query: 55  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV 105
           TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTV AVKDGG  ML  E GA+
Sbjct: 362 TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVTAVKDGGEWML--EAGAL 409

[Close]
BLAST of Spg004022 vs. TAIR 10
Match: AT2G07690.1 (Minichromosome maintenance (MCM2/3/5) family protein )

HSP 1 Score: 42.7 bits (99), Expect = 3.4e-04
Identity = 23/50 (46.00%), Postives = 31/50 (62.00%), Query Frame = 0 

Query: 55  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV 105
           T KSQFLKF  K +  AV T+G GS++AGLT + ++D        E GA+
Sbjct: 379 TAKSQFLKFVEKTAPIAVYTSGKGSSAAGLTASVIRDSSTREFYLEGGAM 428

[Close]
BLAST of Spg004022 vs. TAIR 10
Match: AT2G07690.2 (Minichromosome maintenance (MCM2/3/5) family protein )

HSP 1 Score: 42.7 bits (99), Expect = 3.4e-04
Identity = 23/50 (46.00%), Postives = 31/50 (62.00%), Query Frame = 0 

Query: 55  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV 105
           T KSQFLKF  K +  AV T+G GS++AGLT + ++D        E GA+
Sbjct: 377 TAKSQFLKFVEKTAPIAVYTSGKGSSAAGLTASVIRDSSTREFYLEGGAM 426

[Close]
BLAST of Spg004022 vs. TAIR 10
Match: AT1G44900.1 (minichromosome maintenance (MCM2/3/5) family protein )

HSP 1 Score: 42.4 bits (98), Expect = 4.5e-04
Identity = 21/37 (56.76%), Postives = 25/37 (67.57%), Query Frame = 0 

Query: 55  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKD 92
           T KSQFLK+  K   RAV TTG G+++ GLT A  KD
Sbjct: 553 TAKSQFLKYVEKTGQRAVYTTGKGASAVGLTAAVHKD 589

[Close]
BLAST of Spg004022 vs. TAIR 10
Match: AT1G44900.2 (minichromosome maintenance (MCM2/3/5) family protein )

HSP 1 Score: 42.4 bits (98), Expect = 4.5e-04
Identity = 21/37 (56.76%), Postives = 25/37 (67.57%), Query Frame = 0 

Query: 55  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKD 92
           T KSQFLK+  K   RAV TTG G+++ GLT A  KD
Sbjct: 551 TAKSQFLKYVEKTGQRAVYTTGKGASAVGLTAAVHKD 587

The following BLAST results are available for this feature:
BLAST of Spg004022 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008455167.11.8e-1088.00PREDICTED: probable DNA helicase MCM9 isoform X1 [Cucumis melo][more]
XP_016901680.11.8e-1088.00PREDICTED: probable DNA helicase MCM9 isoform X2 [Cucumis melo][more]
XP_008455168.11.8e-1088.00PREDICTED: probable DNA helicase MCM9 isoform X3 [Cucumis melo][more]
XP_008455169.11.8e-1088.00PREDICTED: probable DNA helicase MCM9 isoform X4 [Cucumis melo][more]
XP_022952902.11.8e-1088.00probable DNA helicase MCM9 isoform X2 [Cucurbita moschata] >KAG6571851.1 putativ... [more]
BLAST of Spg004022 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
F4IFF36.7e-1386.00Probable DNA helicase MCM9 OS=Arabidopsis thaliana OX=3702 GN=MCM9 PE=3 SV=1[more]
B8B4061.5e-1284.00Probable DNA helicase MCM9 OS=Oryza sativa subsp. indica OX=39946 GN=MCM9 PE=3 S... [more]
Q69QA61.5e-1284.00Probable DNA helicase MCM9 OS=Oryza sativa subsp. japonica OX=39947 GN=MCM9 PE=2... [more]
F1N2W94.5e-0968.00DNA helicase MCM9 OS=Bos taurus OX=9913 GN=MCM9 PE=3 SV=2[more]
Q9NXL94.5e-0968.00DNA helicase MCM9 OS=Homo sapiens OX=9606 GN=MCM9 PE=1 SV=4[more]
BLAST of Spg004022 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GLI28.6e-1188.00DNA helicase OS=Cucurbita moschata OX=3662 GN=LOC111455445 PE=3 SV=1[more]
A0A6J1I3C78.6e-1188.00DNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111470623 PE=3 SV=1[more]
A0A6J1I4M28.6e-1188.00DNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111470623 PE=3 SV=1[more]
A0A5D3C4S88.6e-1188.00DNA helicase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G002190 P... [more]
A0A5A7SLG28.6e-1188.00DNA helicase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G002160 ... [more]
BLAST of Spg004022 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G14050.14.8e-1486.00minichromosome maintenance 9 [more]
AT2G07690.13.4e-0446.00Minichromosome maintenance (MCM2/3/5) family protein [more]
AT2G07690.23.4e-0446.00Minichromosome maintenance (MCM2/3/5) family protein [more]
AT1G44900.14.5e-0456.76minichromosome maintenance (MCM2/3/5) family protein [more]
AT1G44900.24.5e-0456.76minichromosome maintenance (MCM2/3/5) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 30..110
e-value: 9.9E-11
score: 43.2
IPR001208MCM domainPFAMPF00493MCMcoord: 52..104
e-value: 1.1E-7
score: 31.2
NoneNo IPR availablePANTHERPTHR11630:SF48DNA HELICASE MCM9coord: 54..103
IPR031327Mini-chromosome maintenance proteinPANTHERPTHR11630DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBERcoord: 54..103

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg004022.1Spg004022.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032508 DNA duplex unwinding
cellular_component GO:0016020 membrane
molecular_function GO:0005524 ATP binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0003678 DNA helicase activity