Spg003862 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAAATACGTTCAGGCCATATGCAAATACCTCATTCTTGCACTCTTCATCTCTCTCTCCTTTGAAACTCTGCAATTTTCTTTAGAAAACAAAGAGTCTCTCCTTTCCACAGCACAAAGCTCCAACTTCGACGTTTCGGCTGTCGATTACAAAGACGGTTTTCGACCGACAGCCCCCGGAAACAGCCCTGGAGTTGGCCATCACTCTTTTCAGCAGGGAAGGAGAAATATGGAAGTAGAGGCTGCAAGTGATCAGGCTCTTCACCACATAACTGCAAAATATAAGCTGAGACTCATTAATTAG ATGGGAAAATACGTTCAGGCCATATGCAAATACCTCATTCTTGCACTCTTCATCTCTCTCTCCTTTGAAACTCTGCAATTTTCTTTAGAAAACAAAGAGTCTCTCCTTTCCACAGCACAAAGCTCCAACTTCGACGTTTCGGCTGTCGATTACAAAGACGGTTTTCGACCGACAGCCCCCGGAAACAGCCCTGGAGTTGGCCATCACTCTTTTCAGCAGGGAAGGAGAAATATGGAAGTAGAGGCTGCAAGTGATCAGGCTCTTCACCACATAACTGCAAAATATAAGCTGAGACTCATTAATTAG ATGGGAAAATACGTTCAGGCCATATGCAAATACCTCATTCTTGCACTCTTCATCTCTCTCTCCTTTGAAACTCTGCAATTTTCTTTAGAAAACAAAGAGTCTCTCCTTTCCACAGCACAAAGCTCCAACTTCGACGTTTCGGCTGTCGATTACAAAGACGGTTTTCGACCGACAGCCCCCGGAAACAGCCCTGGAGTTGGCCATCACTCTTTTCAGCAGGGAAGGAGAAATATGGAAGTAGAGGCTGCAAGTGATCAGGCTCTTCACCACATAACTGCAAAATATAAGCTGAGACTCATTAATTAG MGKYVQAICKYLILALFISLSFETLQFSLENKESLLSTAQSSNFDVSAVDYKDGFRPTAPGNSPGVGHHSFQQGRRNMEVEAASDQALHHITAKYKLRLIN Homology
BLAST of Spg003862 vs. NCBI nr
Match: XP_011650158.1 (precursor of CEP9 [Cucumis sativus]) HSP 1 Score: 55.8 bits (133), Expect = 2.4e-04 Identity = 43/103 (41.75%), Postives = 50/103 (48.54%), Query Frame = 0
BLAST of Spg003862 vs. NCBI nr
Match: XP_008457955.1 (PREDICTED: uncharacterized protein LOC103497520 [Cucumis melo] >KAA0045832.1 uncharacterized protein E6C27_scaffold243G003610 [Cucumis melo var. makuwa] >TYJ99451.1 uncharacterized protein E5676_scaffold123G00110 [Cucumis melo var. makuwa]) HSP 1 Score: 54.7 bits (130), Expect = 5.4e-04 Identity = 42/97 (43.30%), Postives = 53/97 (54.64%), Query Frame = 0
BLAST of Spg003862 vs. ExPASy TrEMBL
Match: A0A0A0LMN4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285370 PE=3 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 1.2e-04 Identity = 43/103 (41.75%), Postives = 50/103 (48.54%), Query Frame = 0
BLAST of Spg003862 vs. ExPASy TrEMBL
Match: A0A5A7TR16 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00110 PE=3 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 2.6e-04 Identity = 42/97 (43.30%), Postives = 53/97 (54.64%), Query Frame = 0
BLAST of Spg003862 vs. ExPASy TrEMBL
Match: A0A1S3C7Z6 (uncharacterized protein LOC103497520 OS=Cucumis melo OX=3656 GN=LOC103497520 PE=3 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 2.6e-04 Identity = 42/97 (43.30%), Postives = 53/97 (54.64%), Query Frame = 0
BLAST of Spg003862 vs. TAIR 10
Match: AT5G66816.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 40.8 bits (94), Expect = 7.6e-04 Identity = 26/59 (44.07%), Postives = 36/59 (61.02%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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