Spg003836 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg003836
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	histone H1-like
Location	scaffold4: 46276177 .. 46277500 (+)
RNA-Seq Expression	Spg003836
Synteny	Spg003836

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTCTAAAATCAATTATCCTCTCTCTCTCTCTCTCTTCCGTTAACGTTTCGAGTTTAAGCTTTTGATTGATTCCGATCATGGCTTCCGCCGCCGATCCCGTTGTGCCCTCCGACGCGCCTGCCGCCGTATCCGCGGCGGCTCAGCCGGTGGAGAACGATGCTAAGTCCAAGAAGGCTGCGGCCTCCAAAGCTTCGAAGGCCAAGAAACCATCTGGTGCGAAGAAGACCAAATCTTCGCCGACTCATCCTCCTTTCTTTCAGGTATGAGAAACTAATCTCTACTTGATTGATGATGTTTTGTTTTTGTTCTATTCAATGCTCTGTTCTGATTGGATTTTGAAATTGTTACGCAGATGATTAGCGAAGCGATCGTATCGCTGAAGGAGAGGACCGGCTCGAGTCAGTACGCCATTACGAAGTTCAACGAAGAGAAGCACAAGCAATTGCCGTCGAATTTCAGGAAGCTCTTGCTCGTTCACCTGAAGAAACTCGTCGCCGCTGATAAACTCGTTAAGGTCAAGAACTCCTACAAGCTTCCATCGGCGCGTTCTCTTCAGGCGAAAGCTGCAGCAGCTCCAGTCGCCGCCAAGAAGCCAGCGAGCTCAAAGCTCAAGAAGGCCGCGAGCGTCAAGAAGGCAGCCGTCGCTAAACCTAAGGCGAAAACTGCTGTGAAACCTAAGCCGAAGGCCGTGGTGAAGCCGAAGACGGTCGCGAAATCCAAGGCCGTCGCGAAGCCGAAGGCCGCCGCTGCAGCCAAGCCTAAGGCGGCAGAGAAGGTCAAGAAGGTCGCTCCGAAGCCGAAACCTGCAGCGAAGCCTGCGAAAGTTGCGAAAACATTGTCGCGAACTTCACCAGGAAAGAGAGCAGCAACAGCGGCGGCGAAGACGAAGAAGGTAGCCGCGAAGAAGCCAAAGACTGTAAAGTCGCCGGCGAGGAAAGTCCAGGCAAGGAAAGTCAAGAAATGAATCGTTTAGGGTTTTTGATTAAATTTCTAGGGTTTGTTGTTACTTACTACTTAGTTCGTAGCGATGTAAATTAGGGATATGAGATGCAATCGTTTGCCATACACTATTTTTATTAAAATTCAGTTTGATAAATTCATGGATTTATCAAATCAATCTTCCTCCTCATTTTCTTCTTCCTTTTAATTATGTTCTTAAGAGAATGCTTGTTTAGGTTTGTGATTCTGAGGAATTGTAGAGAAGATCAAAAGCTTCGAATGTAGCTTCAATGGCGGATTTCTCGTTTCAGAAGCCTTGTTTTAACCCGCTTAATCCAACATTCATATCTAATCTGCAATGTCGTTTCGGAATCTTAACGGCC

mRNA sequence

ATGGCTTCCGCCGCCGATCCCGTTGTGCCCTCCGACGCGCCTGCCGCCGTATCCGCGGCGGCTCAGCCGGTGGAGAACGATGCTAAGTCCAAGAAGGCTGCGGCCTCCAAAGCTTCGAAGGCCAAGAAACCATCTGGTGCGAAGAAGACCAAATCTTCGCCGACTCATCCTCCTTTCTTTCAGATGATTAGCGAAGCGATCGTATCGCTGAAGGAGAGGACCGGCTCGAGTCAGTACGCCATTACGAAGTTCAACGAAGAGAAGCACAAGCAATTGCCGTCGAATTTCAGGAAGCTCTTGCTCGTTCACCTGAAGAAACTCGTCGCCGCTGATAAACTCGTTAAGGTCAAGAACTCCTACAAGCTTCCATCGGCGCGTTCTCTTCAGGCGAAAGCTGCAGCAGCTCCAGTCGCCGCCAAGAAGCCAGCGAGCTCAAAGCTCAAGAAGGCCGCGAGCGTCAAGAAGGCAGCCGTCGCTAAACCTAAGGCGAAAACTGCTGTGAAACCTAAGCCGAAGGCCGTGGTGAAGCCGAAGACGGTCGCGAAATCCAAGGCCGTCGCGAAGCCGAAGGCCGCCGCTGCAGCCAAGCCTAAGGCGGCAGAGAAGGTCAAGAAGGTCGCTCCGAAGCCGAAACCTGCAGCGAAGCCTGCGAAAGTTGCGAAAACATTGTCGCGAACTTCACCAGGAAAGAGAGCAGCAACAGCGGCGGCGAAGACGAAGAAGGTAGCCGCGAAGAAGCCAAAGACTGTAAAGTCGCCGGCGAGGAAAGTCCAGGCAAGGAAAGTCAAGAAATGA

Coding sequence (CDS)

ATGGCTTCCGCCGCCGATCCCGTTGTGCCCTCCGACGCGCCTGCCGCCGTATCCGCGGCGGCTCAGCCGGTGGAGAACGATGCTAAGTCCAAGAAGGCTGCGGCCTCCAAAGCTTCGAAGGCCAAGAAACCATCTGGTGCGAAGAAGACCAAATCTTCGCCGACTCATCCTCCTTTCTTTCAGATGATTAGCGAAGCGATCGTATCGCTGAAGGAGAGGACCGGCTCGAGTCAGTACGCCATTACGAAGTTCAACGAAGAGAAGCACAAGCAATTGCCGTCGAATTTCAGGAAGCTCTTGCTCGTTCACCTGAAGAAACTCGTCGCCGCTGATAAACTCGTTAAGGTCAAGAACTCCTACAAGCTTCCATCGGCGCGTTCTCTTCAGGCGAAAGCTGCAGCAGCTCCAGTCGCCGCCAAGAAGCCAGCGAGCTCAAAGCTCAAGAAGGCCGCGAGCGTCAAGAAGGCAGCCGTCGCTAAACCTAAGGCGAAAACTGCTGTGAAACCTAAGCCGAAGGCCGTGGTGAAGCCGAAGACGGTCGCGAAATCCAAGGCCGTCGCGAAGCCGAAGGCCGCCGCTGCAGCCAAGCCTAAGGCGGCAGAGAAGGTCAAGAAGGTCGCTCCGAAGCCGAAACCTGCAGCGAAGCCTGCGAAAGTTGCGAAAACATTGTCGCGAACTTCACCAGGAAAGAGAGCAGCAACAGCGGCGGCGAAGACGAAGAAGGTAGCCGCGAAGAAGCCAAAGACTGTAAAGTCGCCGGCGAGGAAAGTCCAGGCAAGGAAAGTCAAGAAATGA

Protein sequence

MASAADPVVPSDAPAAVSAAAQPVENDAKSKKAAASKASKAKKPSGAKKTKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSYKLPSARSLQAKAAAAPVAAKKPASSKLKKAASVKKAAVAKPKAKTAVKPKPKAVVKPKTVAKSKAVAKPKAAAAAKPKAAEKVKKVAPKPKPAAKPAKVAKTLSRTSPGKRAATAAAKTKKVAAKKPKTVKSPARKVQARKVKK

Homology

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BLAST of Spg003836 vs. NCBI nr
Match: KAG6599320.1 (Histone H1.2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 365.9 bits (938), Expect = 2.9e-97
Identity = 236/264 (89.39%), Postives = 244/264 (92.42%), Query Frame = 0


Query: 1   MASAADPVVPSDAPAAVSAAAQPVENDAKSKKAAASKASKAKKPSGAKKTKSSPTHPPFF 60
           M+SAADPV  SDAPA V+A AQPVEND+KSKKAAASKASKAKKPSGAK+T+SSPTHPPFF
Sbjct: 1   MSSAADPVASSDAPATVAAVAQPVENDSKSKKAAASKASKAKKPSGAKRTRSSPTHPPFF 60

Query: 61  QMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY 120
           +MISEAIVSLKERTGSSQYAITKF+EEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY
Sbjct: 61  EMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY 120

Query: 121 KLPSARSLQAKAAAAPVAAKKPASSKLKKAASVKKAAVAKPKAKTAVKPKPKAVVKPKTV 180
           KLPSARS   KAAAAPV AKKPASSKLK A SVKKAAVAKPKAKTAVKPKPKAV KPK  
Sbjct: 121 KLPSARS---KAAAAPVVAKKPASSKLKAAVSVKKAAVAKPKAKTAVKPKPKAVAKPKAA 180

Query: 181 AKSKAVAKPKAAAAAKPKAAEKVKKVAPKPKPAAKPAKVAKTLSRTSPGKRAATAAAKTK 240
           AKSK VAKPKA A AK KAAEKVKKVAPKPKPAAKPAKVAKTLSRTSPGK+AA  AAK K
Sbjct: 181 AKSKVVAKPKAVAPAKRKAAEKVKKVAPKPKPAAKPAKVAKTLSRTSPGKKAA-PAAKAK 240

Query: 241 KVAAKKPKTVKSPARKVQARKVKK 265
           KVAAKKPKTVKSPARKVQARKVKK
Sbjct: 241 KVAAKKPKTVKSPARKVQARKVKK 260

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BLAST of Spg003836 vs. NCBI nr
Match: XP_022946127.1 (histone H1-like [Cucurbita moschata] >KAG7030316.1 Histone H1.2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 364.8 bits (935), Expect = 6.4e-97
Identity = 235/264 (89.02%), Postives = 245/264 (92.80%), Query Frame = 0


Query: 1   MASAADPVVPSDAPAAVSAAAQPVENDAKSKKAAASKASKAKKPSGAKKTKSSPTHPPFF 60
           M+SAADPV  SDAPA V+A AQPVEND+KSKKAAASKASKAKKPSGAK+T+SSPTHPPFF
Sbjct: 1   MSSAADPVASSDAPATVAAVAQPVENDSKSKKAAASKASKAKKPSGAKRTRSSPTHPPFF 60

Query: 61  QMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY 120
           +MISEAIVSLKERTGSSQYAITKF+EEKHK+LPSNFRKLLLVHLKKLVAADKLVKVKNSY
Sbjct: 61  EMISEAIVSLKERTGSSQYAITKFSEEKHKKLPSNFRKLLLVHLKKLVAADKLVKVKNSY 120

Query: 121 KLPSARSLQAKAAAAPVAAKKPASSKLKKAASVKKAAVAKPKAKTAVKPKPKAVVKPKTV 180
           KLPSARS   KAAAAPV AKKPASSKLK A SVKKAAVAKPKAKTAVKPKPKAV KPK+ 
Sbjct: 121 KLPSARS---KAAAAPVVAKKPASSKLKAAVSVKKAAVAKPKAKTAVKPKPKAVAKPKSA 180

Query: 181 AKSKAVAKPKAAAAAKPKAAEKVKKVAPKPKPAAKPAKVAKTLSRTSPGKRAATAAAKTK 240
           AKSK VAKPKA A AK KAAEKVKKVAPKPKPAAKPAKVAKTLSRTSPGK+AA  AAK K
Sbjct: 181 AKSKVVAKPKAVAPAKRKAAEKVKKVAPKPKPAAKPAKVAKTLSRTSPGKKAA-PAAKAK 240

Query: 241 KVAAKKPKTVKSPARKVQARKVKK 265
           KVAAKKPKTVKSPARKVQARKVKK
Sbjct: 241 KVAAKKPKTVKSPARKVQARKVKK 260

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BLAST of Spg003836 vs. NCBI nr
Match: XP_023521173.1 (histone H1-like [Cucurbita pepo subsp. pepo] >XP_023521452.1 histone H1-like [Cucurbita pepo subsp. pepo] >XP_023547297.1 histone H1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 361.3 bits (926), Expect = 7.1e-96
Identity = 233/264 (88.26%), Postives = 241/264 (91.29%), Query Frame = 0


Query: 1   MASAADPVVPSDAPAAVSAAAQPVENDAKSKKAAASKASKAKKPSGAKKTKSSPTHPPFF 60
           M+SAADPV  SDAPA V+  AQP END+KSKKAAASKASKAKKPSGAK+T+SSPTHPPFF
Sbjct: 1   MSSAADPVASSDAPATVAVVAQPAENDSKSKKAAASKASKAKKPSGAKRTRSSPTHPPFF 60

Query: 61  QMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY 120
           +MISEAIVSLKERTGSSQYAITKF+EEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY
Sbjct: 61  EMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY 120

Query: 121 KLPSARSLQAKAAAAPVAAKKPASSKLKKAASVKKAAVAKPKAKTAVKPKPKAVVKPKTV 180
           KLPSARS   KAAAAPV AKKPASSKLK A SVKKAAVAKPKAKTAVKPKPK V KPK  
Sbjct: 121 KLPSARS---KAAAAPVVAKKPASSKLKAAVSVKKAAVAKPKAKTAVKPKPKVVAKPKAA 180

Query: 181 AKSKAVAKPKAAAAAKPKAAEKVKKVAPKPKPAAKPAKVAKTLSRTSPGKRAATAAAKTK 240
           AKSK VAKPKA A AK KAAEKVKKVAPKPKPAAKPAKVAKTLSRTSPGK+AA  AAK K
Sbjct: 181 AKSKVVAKPKAVAPAKRKAAEKVKKVAPKPKPAAKPAKVAKTLSRTSPGKKAA-PAAKAK 240

Query: 241 KVAAKKPKTVKSPARKVQARKVKK 265
           KVAAKKPKTVKSPARKVQARKVKK
Sbjct: 241 KVAAKKPKTVKSPARKVQARKVKK 260

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BLAST of Spg003836 vs. NCBI nr
Match: XP_022999095.1 (histone H1-like [Cucurbita maxima])

HSP 1 Score: 357.1 bits (915), Expect = 1.3e-94
Identity = 231/264 (87.50%), Postives = 239/264 (90.53%), Query Frame = 0


Query: 1   MASAADPVVPSDAPAAVSAAAQPVENDAKSKKAAASKASKAKKPSGAKKTKSSPTHPPFF 60
           M+SAADPV  SDAPA V+  A PVEND+KSKKAAASKASKAKKPSGAK+T+SSPTHPPFF
Sbjct: 1   MSSAADPVASSDAPATVAVVAPPVENDSKSKKAAASKASKAKKPSGAKRTRSSPTHPPFF 60

Query: 61  QMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY 120
           +MISEAIVSLKERTGSSQYAITKF+EEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY
Sbjct: 61  EMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY 120

Query: 121 KLPSARSLQAKAAAAPVAAKKPASSKLKKAASVKKAAVAKPKAKTAVKPKPKAVVKPKTV 180
           KLPSARS   KAAAAPV AKKPASSKLK A SVKKAAVAKPKAKTAVKPKPK V KPK  
Sbjct: 121 KLPSARS---KAAAAPVVAKKPASSKLKAAVSVKKAAVAKPKAKTAVKPKPKVVAKPKAA 180

Query: 181 AKSKAVAKPKAAAAAKPKAAEKVKKVAPKPKPAAKPAKVAKTLSRTSPGKRAATAAAKTK 240
           AKSK V KPKA A AK KAAEKVKKVAPKPKPAAKPAKVAKTLSR SPGK+AA  AAK K
Sbjct: 181 AKSKVVGKPKAVAPAKRKAAEKVKKVAPKPKPAAKPAKVAKTLSRASPGKKAA-PAAKAK 240

Query: 241 KVAAKKPKTVKSPARKVQARKVKK 265
           KVAAKKPKTVKSPARKVQARKVKK
Sbjct: 241 KVAAKKPKTVKSPARKVQARKVKK 260

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BLAST of Spg003836 vs. NCBI nr
Match: XP_022142941.1 (histone H1-like [Momordica charantia])

HSP 1 Score: 345.5 bits (885), Expect = 4.0e-91
Identity = 233/266 (87.59%), Postives = 244/266 (91.73%), Query Frame = 0


Query: 1   MASAADPVVPSDAPAAVSAAAQPVENDAKSKKAAASKASKAKKPSGAKKTKSSPTHPPFF 60
           MASAADP+VPSDAPAA +A    V NDAK KKAA+SKASKAKKPSGAK+ KSSPTHPPFF
Sbjct: 1   MASAADPIVPSDAPAADAAEVLTVANDAKPKKAASSKASKAKKPSGAKRPKSSPTHPPFF 60

Query: 61  QMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY 120
           QMISEAIVSLKERTGSSQYAITKF+EEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY
Sbjct: 61  QMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY 120

Query: 121 KLPSARSLQAKAAAAPVAAKKPASSKLKKAASV-KKAAVAKPKAKTAVKPKPKAVVKPKT 180
           KLPSARS+QAK AAAPVAAKKPASSKLK AASV KKAAV KPKAKTAVKPKPKAVVKPKT
Sbjct: 121 KLPSARSIQAK-AAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKT 180

Query: 181 VAKSKAVAKPK-AAAAAKPKAAEKVKKVAPKPKPAAKPAKVAKTLSRTSPGKRAATAAAK 240
           ++KSK VAKPK AAAAAKPKAA KV K A K KPAA+PAKVAKTL++TSPGKRAA  AAK
Sbjct: 181 ISKSKVVAKPKAAAAAAKPKAAAKV-KAAAKAKPAARPAKVAKTLTQTSPGKRAA-PAAK 240

Query: 241 TKKVAAKKPKTVKSPARKVQARKVKK 265
            KKVAAKKPKTVKSPARKVQARKVKK
Sbjct: 241 AKKVAAKKPKTVKSPARKVQARKVKK 263

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BLAST of Spg003836 vs. ExPASy Swiss-Prot
Match: P37218 (Histone H1 OS=Solanum lycopersicum OX=4081 PE=3 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 5.7e-40
Identity = 149/284 (52.46%), Postives = 180/284 (63.38%), Query Frame = 0


Query: 6   DPVVPSDAPAAVSAAAQPVENDAK--SKKAAASKASKAKKPSGAKKTKSSPTHPPFFQMI 65
           +PV+ ++      AA + V+++A   +K   A K +KAKKP+  +K  ++PTHPP+F+MI
Sbjct: 5   EPVIVNEV-VEEQAAPETVKDEANPPAKSGKAKKETKAKKPAAPRKRSATPTHPPYFEMI 64

Query: 66  SEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSYKLP 125
            +AIV+LKERTGSSQ+AITKF EEK K LPSNF+KLLL  LKK VA++KLVKVKNSYKLP
Sbjct: 65  KDAIVTLKERTGSSQHAITKFIEEKQKSLPSNFKKLLLTQLKKFVASEKLVKVKNSYKLP 124

Query: 126 SARSLQAKAAAA---PVAAK-KPASS-------KLKKAASVKKAAVAKP--KAKTAVKPK 185
           S     A A  A   P AAK KPA+        K K AA  K AA AKP  KAK A K K
Sbjct: 125 SGSKPAAAAVPAKKKPAAAKSKPAAKPKAAVKPKAKPAAKAKPAAKAKPAAKAKPAAKAK 184

Query: 186 PKAVVKPKTVAKSKAVAKPKAAAAAKPKAAEKVKKVAPKPKPAAKP--------AKVAKT 245
           P A  KP   AK  A AKPKAAAAAKPKAA K K    K K A KP        AKVAKT
Sbjct: 185 PAAKAKPAAKAKPVAKAKPKAAAAAKPKAAVKPKAAPAKTKAAVKPNLKAKTTTAKVAKT 244

Query: 246 LSRTSPGKRAATAAAKTKKVAAKK--PKTVKSPARKVQARKVKK 265
            +RT+P ++AA  A   KK   KK   K VKSPA+K   ++ +K
Sbjct: 245 ATRTTPSRKAAPKATPAKKEPVKKAPAKNVKSPAKKATPKRGRK 287

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BLAST of Spg003836 vs. ExPASy Swiss-Prot
Match: Q9M5W4 (Histone H1 OS=Euphorbia esula OX=3993 PE=2 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.7e-37
Identity = 145/251 (57.77%), Postives = 155/251 (61.75%), Query Frame = 0


Query: 13  APAAVSAAAQPVENDAKSK---KAAASKASKAKKP-SGAKKTKSSPT--HPPFFQMISEA 72
           A   VSA   P   + KSK   KAAA K  K KK    AKK KS  T  HP FF+MIS+A
Sbjct: 2   ADTPVSAPVVPEVTERKSKRGTKAAAVKVPKEKKKVIAAKKPKSKGTSSHPSFFEMISDA 61

Query: 73  IVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSYKLPSAR 132
           I +LKERTGSSQYAI KF E+KHKQLPSNFRKLLL HLKKLVA+ KLVKVKNS+KLPSAR
Sbjct: 62  ISTLKERTGSSQYAINKFVEDKHKQLPSNFRKLLLFHLKKLVASGKLVKVKNSFKLPSAR 121

Query: 133 SLQAKAAAAPVAAKKPASSKLKKAASVKKAAV-AKPKAKTAVKPKPKAVVKPKTVAKSKA 192
                AA AP  AKKP   K K AA  K A + AKPKAK  V  K KA    KTVAK   
Sbjct: 122 -----AAPAPALAKKPTIPKPKVAAKPKTAKIGAKPKAKAKVAAKTKATT--KTVAKKIP 181

Query: 193 VAKPKAAAAAKPKAAEKVKKVAPKPKPAAKPAKVAKTLSRTSPGKRAATAAAKTKKVAAK 252
            AKPKA  A KPK              AAKPAKVAKT +  SPGK+        K V  K
Sbjct: 182 AAKPKAKTAGKPKTV------------AAKPAKVAKTAAVASPGKK--------KAVPVK 225

Query: 253 KPKTVKSPARK 257
           K KTVKSPA K
Sbjct: 242 KVKTVKSPAGK 225

[Close]

BLAST of Spg003836 vs. ExPASy Swiss-Prot
Match: P26569 (Histone H1.2 OS=Arabidopsis thaliana OX=3702 GN=At2g30620 PE=1 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.0e-33
Identity = 133/257 (51.75%), Postives = 160/257 (62.26%), Query Frame = 0


Query: 18  SAAAQPVENDAKSKKAAASKASKAK-KPSGAKKTKSSPTHPPFFQMISEAIVSLKERTGS 77
           S   +P     KSKK   +KA+K   K +   K K++ +HP + +MI +AIV+LKERTGS
Sbjct: 23  SPEKKPAAKGGKSKKTTTAKATKKPVKAAAPTKKKTTSSHPTYEEMIKDAIVTLKERTGS 82

Query: 78  SQYAITKFNEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSYKLPSARSLQAKAAAAP 137
           SQYAI KF EEKHK LP  FRKLLLV+LK+LVA++KLVKVK S+K+PSARS      AAP
Sbjct: 83  SQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLVKVKASFKIPSARSAATPKPAAP 142

Query: 138 VAAKKPASSKLKKAASVKKAAVAKPKAKTAVKPKPKAVVKPKTVAKSKAVAKPKA-AAAA 197
           V  K    +K K   +   AAVA  KAK A K   K     K VAK+K  AKPKA   AA
Sbjct: 143 VKKKATVVAKPKGKVA---AAVAPAKAKAAAKGTKKPAA--KVVAKAKVTAKPKAKVTAA 202

Query: 198 KPK-----AAEKVKKVAPKPKPAAKPAKVAKTLSRTSPGKRAATAAAK---TKKVAAKKP 257
           KPK     A  K K VA KPK   +PAK ++T +RTSPGK+ A  A K   TKK  AK  
Sbjct: 203 KPKSKSVAAVSKTKAVAAKPKAKERPAKASRTSTRTSPGKKVAAPAKKVAVTKKAPAKSV 262

Query: 258 KTVKSPARKVQARKVKK 265
           K VKSPA++   RK KK
Sbjct: 263 K-VKSPAKRASTRKAKK 273

[Close]

BLAST of Spg003836 vs. ExPASy Swiss-Prot
Match: P23444 (Histone H1 OS=Zea mays OX=4577 PE=2 SV=2)

HSP 1 Score: 141.7 bits (356), Expect = 1.2e-32
Identity = 136/261 (52.11%), Postives = 158/261 (60.54%), Query Frame = 0


Query: 11  SDAPAAVSAAAQPVENDAKSKKAAASKASKAKKPSGAKKTKSSPTHPPFFQMISEAIVSL 70
           ++ PA +  AA     DA +  AA + A+KAKK +  KK ++SPTH P+ +M+SEAI SL
Sbjct: 6   TETPAPLVDAAPEAPADAPAAPAADANAAKAKKATAPKK-RASPTHLPYAEMVSEAITSL 65

Query: 71  KERTGSSQYAITKFNEEKHK-QLPSNFRKLLLVHLKKLVAADKLVKVKNSYKLPSARSLQ 130
           KERTGSS YAI KF E+KHK +LP NFRKLL V LKKLVA  KL KVKNSYKL SA    
Sbjct: 66  KERTGSSSYAIAKFVEDKHKAKLPPNFRKLLNVQLKKLVAGGKLTKVKNSYKLSSATKPN 125

Query: 131 AKAAAAPVAAKKPASSKLKKAASVKKAAVAKPKAKTAVKPKPKAVVKPKTVAKSKAVAKP 190
            K  AAP   KKP      K  + K  A AKPKAKT  K KP    KPK  AK KAV KP
Sbjct: 126 PKPKAAP---KKP------KTGAKKPKAAAKPKAKTPAKAKP--ATKPKPAAKPKAVVKP 185

Query: 191 KAAA--AAKPKAAEKVKKVAPKPKPAAKP---AKVAKTLSRTSPGKRA-ATAAAKTKKVA 250
           K  A   AKP A  K K    KPKP AK    AK AKT ++ +PGK+A A  AA +KK A
Sbjct: 186 KTPAKPKAKPAAKAKPKTAGAKPKPLAKKAGRAKAAKTSAKDTPGKKAPAKKAAPSKKAA 245

Query: 251 AKKPKTVKSPARKVQARKVKK 265
                   +P RK  +RK KK
Sbjct: 246 --------TPVRKAPSRKAKK 246

[Close]

BLAST of Spg003836 vs. ExPASy Swiss-Prot
Match: P08283 (Histone H1 OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.1e-30
Identity = 126/265 (47.55%), Postives = 157/265 (59.25%), Query Frame = 0


Query: 9   VPSDAPAAVSAAAQPVENDAKSKKAAASKASKAK--KPSGAKKTKSSPTHPPFFQMISEA 68
           VP       +   +P   + +  KA   K  KAK  KP  A K ++  +HP + +MI +A
Sbjct: 13  VPEPIVTEPTTITEPEVPEKEEPKAEVEKTKKAKGSKPKKASKPRNPASHPTYEEMIKDA 72

Query: 69  IVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSYKLPSAR 128
           IVSLKE+ GSSQYAI KF EEK KQLP+NF+KLLL +LKK VA+ KL+KVK S+KL +  
Sbjct: 73  IVSLKEKNGSSQYAIAKFIEEKQKQLPANFKKLLLQNLKKNVASGKLIKVKGSFKLSA-- 132

Query: 129 SLQAKAAAAPVAAKKPASSKLKKAASVKKAAVAKPKAKTAVKPKPKAVVKPKTVAKSKAV 188
                      AAKKPA +K K   + K  +V   KAK A KPK KAVVKPK  +K+KAV
Sbjct: 133 -----------AAKKPAVAKPKAKTAAKAKSV---KAKPAAKPKAKAVVKPKVASKAKAV 192

Query: 189 -AKPKAAAAAKPKAAEKVK------KVAPKPKPAAKPAKVAKTLSRTSPGKRAAT---AA 248
            AKPK AAA     A K K      K   KPK   KPAKVAKT  +T+PGK+ A     A
Sbjct: 193 AAKPKKAAAKPKTVAAKTKPTAAKPKAVVKPKSKVKPAKVAKTSVKTTPGKKVAAVKKVA 252

Query: 249 AKTKKVAAKKPKTVKSPARKVQARK 262
           AK   V + K K+VKSP +KV  ++
Sbjct: 253 AKKVPVKSVKAKSVKSPVKKVSVKR 261

[Close]

BLAST of Spg003836 vs. ExPASy TrEMBL
Match: A0A6J1G2W2 (histone H1-like OS=Cucurbita moschata OX=3662 GN=LOC111450301 PE=3 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 3.1e-97
Identity = 235/264 (89.02%), Postives = 245/264 (92.80%), Query Frame = 0


Query: 1   MASAADPVVPSDAPAAVSAAAQPVENDAKSKKAAASKASKAKKPSGAKKTKSSPTHPPFF 60
           M+SAADPV  SDAPA V+A AQPVEND+KSKKAAASKASKAKKPSGAK+T+SSPTHPPFF
Sbjct: 1   MSSAADPVASSDAPATVAAVAQPVENDSKSKKAAASKASKAKKPSGAKRTRSSPTHPPFF 60

Query: 61  QMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY 120
           +MISEAIVSLKERTGSSQYAITKF+EEKHK+LPSNFRKLLLVHLKKLVAADKLVKVKNSY
Sbjct: 61  EMISEAIVSLKERTGSSQYAITKFSEEKHKKLPSNFRKLLLVHLKKLVAADKLVKVKNSY 120

Query: 121 KLPSARSLQAKAAAAPVAAKKPASSKLKKAASVKKAAVAKPKAKTAVKPKPKAVVKPKTV 180
           KLPSARS   KAAAAPV AKKPASSKLK A SVKKAAVAKPKAKTAVKPKPKAV KPK+ 
Sbjct: 121 KLPSARS---KAAAAPVVAKKPASSKLKAAVSVKKAAVAKPKAKTAVKPKPKAVAKPKSA 180

Query: 181 AKSKAVAKPKAAAAAKPKAAEKVKKVAPKPKPAAKPAKVAKTLSRTSPGKRAATAAAKTK 240
           AKSK VAKPKA A AK KAAEKVKKVAPKPKPAAKPAKVAKTLSRTSPGK+AA  AAK K
Sbjct: 181 AKSKVVAKPKAVAPAKRKAAEKVKKVAPKPKPAAKPAKVAKTLSRTSPGKKAA-PAAKAK 240

Query: 241 KVAAKKPKTVKSPARKVQARKVKK 265
           KVAAKKPKTVKSPARKVQARKVKK
Sbjct: 241 KVAAKKPKTVKSPARKVQARKVKK 260

[Close]

BLAST of Spg003836 vs. ExPASy TrEMBL
Match: A0A6J1KEC3 (histone H1-like OS=Cucurbita maxima OX=3661 GN=LOC111493576 PE=3 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 6.5e-95
Identity = 231/264 (87.50%), Postives = 239/264 (90.53%), Query Frame = 0


Query: 1   MASAADPVVPSDAPAAVSAAAQPVENDAKSKKAAASKASKAKKPSGAKKTKSSPTHPPFF 60
           M+SAADPV  SDAPA V+  A PVEND+KSKKAAASKASKAKKPSGAK+T+SSPTHPPFF
Sbjct: 1   MSSAADPVASSDAPATVAVVAPPVENDSKSKKAAASKASKAKKPSGAKRTRSSPTHPPFF 60

Query: 61  QMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY 120
           +MISEAIVSLKERTGSSQYAITKF+EEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY
Sbjct: 61  EMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY 120

Query: 121 KLPSARSLQAKAAAAPVAAKKPASSKLKKAASVKKAAVAKPKAKTAVKPKPKAVVKPKTV 180
           KLPSARS   KAAAAPV AKKPASSKLK A SVKKAAVAKPKAKTAVKPKPK V KPK  
Sbjct: 121 KLPSARS---KAAAAPVVAKKPASSKLKAAVSVKKAAVAKPKAKTAVKPKPKVVAKPKAA 180

Query: 181 AKSKAVAKPKAAAAAKPKAAEKVKKVAPKPKPAAKPAKVAKTLSRTSPGKRAATAAAKTK 240
           AKSK V KPKA A AK KAAEKVKKVAPKPKPAAKPAKVAKTLSR SPGK+AA  AAK K
Sbjct: 181 AKSKVVGKPKAVAPAKRKAAEKVKKVAPKPKPAAKPAKVAKTLSRASPGKKAA-PAAKAK 240

Query: 241 KVAAKKPKTVKSPARKVQARKVKK 265
           KVAAKKPKTVKSPARKVQARKVKK
Sbjct: 241 KVAAKKPKTVKSPARKVQARKVKK 260

[Close]

BLAST of Spg003836 vs. ExPASy TrEMBL
Match: A0A6J1CNP7 (histone H1-like OS=Momordica charantia OX=3673 GN=LOC111012938 PE=3 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 1.9e-91
Identity = 233/266 (87.59%), Postives = 244/266 (91.73%), Query Frame = 0


Query: 1   MASAADPVVPSDAPAAVSAAAQPVENDAKSKKAAASKASKAKKPSGAKKTKSSPTHPPFF 60
           MASAADP+VPSDAPAA +A    V NDAK KKAA+SKASKAKKPSGAK+ KSSPTHPPFF
Sbjct: 1   MASAADPIVPSDAPAADAAEVLTVANDAKPKKAASSKASKAKKPSGAKRPKSSPTHPPFF 60

Query: 61  QMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY 120
           QMISEAIVSLKERTGSSQYAITKF+EEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY
Sbjct: 61  QMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY 120

Query: 121 KLPSARSLQAKAAAAPVAAKKPASSKLKKAASV-KKAAVAKPKAKTAVKPKPKAVVKPKT 180
           KLPSARS+QAK AAAPVAAKKPASSKLK AASV KKAAV KPKAKTAVKPKPKAVVKPKT
Sbjct: 121 KLPSARSIQAK-AAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKT 180

Query: 181 VAKSKAVAKPK-AAAAAKPKAAEKVKKVAPKPKPAAKPAKVAKTLSRTSPGKRAATAAAK 240
           ++KSK VAKPK AAAAAKPKAA KV K A K KPAA+PAKVAKTL++TSPGKRAA  AAK
Sbjct: 181 ISKSKVVAKPKAAAAAAKPKAAAKV-KAAAKAKPAARPAKVAKTLTQTSPGKRAA-PAAK 240

Query: 241 TKKVAAKKPKTVKSPARKVQARKVKK 265
            KKVAAKKPKTVKSPARKVQARKVKK
Sbjct: 241 AKKVAAKKPKTVKSPARKVQARKVKK 263

[Close]

BLAST of Spg003836 vs. ExPASy TrEMBL
Match: A0A5D3D4H1 (Histone H1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001600 PE=3 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 9.7e-91
Identity = 232/268 (86.57%), Postives = 237/268 (88.43%), Query Frame = 0


Query: 1   MASAADPVVPSDAPAAVSAA-AQPVENDAKSKKAAASKASKAKKPSGAKKTKSSPTHPPF 60
           M+SAADPVV SDAPAA  AA AQP END+KSKKAAASKASKAKKPSGAKK +SSPTHPPF
Sbjct: 1   MSSAADPVVSSDAPAAADAAVAQPAENDSKSKKAAASKASKAKKPSGAKKARSSPTHPPF 60

Query: 61  FQMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNS 120
            QMISEAIVSLKERTGSSQYAITKF EEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNS
Sbjct: 61  LQMISEAIVSLKERTGSSQYAITKFTEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNS 120

Query: 121 YKLPSARSLQAK-AAAAPVAAKKPASSKLKKAASVKKAAVAKPKAKTAVKPKPKAVV--K 180
           YKLPSARS+QAK AAAAPVA KKP SSKLK  AS+KK AVAKPKAKTA KPKPKAV   K
Sbjct: 121 YKLPSARSIQAKAAAAAPVATKKPVSSKLKAVASIKKPAVAKPKAKTAAKPKPKAVAKPK 180

Query: 181 PKTVAKSKAVAKPKAAAAAKPKAAEKVKKVAPKPKPAAKPAKVAKTLSRTSPGKRAATAA 240
           PKTV KSK VAKPK   AAK KAAEKVKKVAPKPK  AK  KVAKTLSRTSPGKRAA  A
Sbjct: 181 PKTVTKSKTVAKPK--TAAKTKAAEKVKKVAPKPKAGAKATKVAKTLSRTSPGKRAA-PA 240

Query: 241 AKTKKVAAKKPKTVKSPARKVQARKVKK 265
           AK KKVAAKKPKTVKSPARKVQARKVKK
Sbjct: 241 AKAKKVAAKKPKTVKSPARKVQARKVKK 265

[Close]

BLAST of Spg003836 vs. ExPASy TrEMBL
Match: A0A1S3C278 (histone H1-like OS=Cucumis melo OX=3656 GN=LOC103496189 PE=3 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 8.2e-90
Identity = 231/268 (86.19%), Postives = 236/268 (88.06%), Query Frame = 0


Query: 1   MASAADPVVPSDAPAAVSAA-AQPVENDAKSKKAAASKASKAKKPSGAKKTKSSPTHPPF 60
           M+SAADPVV SDAPAA  AA AQP END+KSKKAAASKASKAKKPSGAKK +SSPTHPPF
Sbjct: 1   MSSAADPVVSSDAPAAADAAVAQPAENDSKSKKAAASKASKAKKPSGAKKARSSPTHPPF 60

Query: 61  FQMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNS 120
            QMISEAIVSLKERTGSSQYAITKF EEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNS
Sbjct: 61  LQMISEAIVSLKERTGSSQYAITKFTEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNS 120

Query: 121 YKLPSARSLQAK-AAAAPVAAKKPASSKLKKAASVKKAAVAKPKAKTAVKPKPKAVV--K 180
           YKLPSARS+QAK AAAAPVA KKP SSKLK  AS+KK AVAKPKAKTA K KPKAV   K
Sbjct: 121 YKLPSARSIQAKAAAAAPVATKKPVSSKLKAVASIKKPAVAKPKAKTAAKSKPKAVAKPK 180

Query: 181 PKTVAKSKAVAKPKAAAAAKPKAAEKVKKVAPKPKPAAKPAKVAKTLSRTSPGKRAATAA 240
           PKTV KSK VAKPK   AAK KAAEKVKKVAPKPK  AK  KVAKTLSRTSPGKRAA  A
Sbjct: 181 PKTVTKSKTVAKPK--TAAKTKAAEKVKKVAPKPKAGAKATKVAKTLSRTSPGKRAA-PA 240

Query: 241 AKTKKVAAKKPKTVKSPARKVQARKVKK 265
           AK KKVAAKKPKTVKSPARKVQARKVKK
Sbjct: 241 AKAKKVAAKKPKTVKSPARKVQARKVKK 265

[Close]

BLAST of Spg003836 vs. TAIR 10
Match: AT2G30620.1 (winged-helix DNA-binding transcription factor family protein )

HSP 1 Score: 145.2 bits (365), Expect = 7.4e-35
Identity = 133/257 (51.75%), Postives = 160/257 (62.26%), Query Frame = 0


Query: 18  SAAAQPVENDAKSKKAAASKASKAK-KPSGAKKTKSSPTHPPFFQMISEAIVSLKERTGS 77
           S   +P     KSKK   +KA+K   K +   K K++ +HP + +MI +AIV+LKERTGS
Sbjct: 23  SPEKKPAAKGGKSKKTTTAKATKKPVKAAAPTKKKTTSSHPTYEEMIKDAIVTLKERTGS 82

Query: 78  SQYAITKFNEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSYKLPSARSLQAKAAAAP 137
           SQYAI KF EEKHK LP  FRKLLLV+LK+LVA++KLVKVK S+K+PSARS      AAP
Sbjct: 83  SQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLVKVKASFKIPSARSAATPKPAAP 142

Query: 138 VAAKKPASSKLKKAASVKKAAVAKPKAKTAVKPKPKAVVKPKTVAKSKAVAKPKA-AAAA 197
           V  K    +K K   +   AAVA  KAK A K   K     K VAK+K  AKPKA   AA
Sbjct: 143 VKKKATVVAKPKGKVA---AAVAPAKAKAAAKGTKKPAA--KVVAKAKVTAKPKAKVTAA 202

Query: 198 KPK-----AAEKVKKVAPKPKPAAKPAKVAKTLSRTSPGKRAATAAAK---TKKVAAKKP 257
           KPK     A  K K VA KPK   +PAK ++T +RTSPGK+ A  A K   TKK  AK  
Sbjct: 203 KPKSKSVAAVSKTKAVAAKPKAKERPAKASRTSTRTSPGKKVAAPAKKVAVTKKAPAKSV 262

Query: 258 KTVKSPARKVQARKVKK 265
           K VKSPA++   RK KK
Sbjct: 263 K-VKSPAKRASTRKAKK 273

[Close]

BLAST of Spg003836 vs. TAIR 10
Match: AT1G06760.1 (winged-helix DNA-binding transcription factor family protein )

HSP 1 Score: 127.9 bits (320), Expect = 1.2e-29
Identity = 128/266 (48.12%), Postives = 158/266 (59.40%), Query Frame = 0


Query: 13  APAAVSAAAQPVENDAKSKKAAASKASKAKKP-SGAKKTKSSPTHPPFFQMISEAIVSLK 72
           A A V+ AA   +  AK +K    K  K KK  + A K ++  +HP + +MI +AIV+LK
Sbjct: 18  ADAPVTDAAVEKKPAAKGRKTKNVKEVKEKKTVAAAPKKRTVSSHPTYEEMIKDAIVTLK 77

Query: 73  ERTGSSQYAITKFNEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSYKLPSARSLQAK 132
           ERTGSSQYAI KF EEK K+LP  FRKLLL++LK+LVA+ KLVKVK S+KLPSA    AK
Sbjct: 78  ERTGSSQYAIQKFIEEKRKELPPTFRKLLLLNLKRLVASGKLVKVKASFKLPSA---SAK 137

Query: 133 AAAAPVAAKKPASSKLKKA----ASVKKAAVAKPKAKTAVKPKPKAVVKPKTVAKSKAVA 192
           A++   AA+K A +K K A       K+   A  KAK  +  KPK     K  AK+KA  
Sbjct: 138 ASSPKAAAEKSAPAKKKPATVAVTKAKRKVAAASKAKKTIAVKPKTAAAKKVTAKAKAKP 197

Query: 193 KPKAAAAAKPKAAEKVKKVAPKPKPAAKPAKVAKTLSRTSPGKRAATAAAKTKKVAAK-- 252
            P+A A     AA K K V  KPK  A+PAK AKT   TSP K+A  A  K   VA K  
Sbjct: 198 VPRATA-----AATKRKAVDAKPKAKARPAKAAKTAKVTSPAKKAVAATKKVATVATKKK 257

Query: 253 -------KPKTVKSPARKVQARKVKK 265
                  KPKTVKSPA++  +R VKK
Sbjct: 258 TPVKKVVKPKTVKSPAKRASSR-VKK 274

[Close]

BLAST of Spg003836 vs. TAIR 10
Match: AT2G30620.2 (winged-helix DNA-binding transcription factor family protein )

HSP 1 Score: 105.5 bits (262), Expect = 6.5e-23
Identity = 104/251 (41.43%), Postives = 127/251 (50.60%), Query Frame = 0


Query: 18  SAAAQPVENDAKSKKAAASKASKAK-KPSGAKKTKSSPTHPPFFQMISEAIVSLKERTGS 77
           S   +P     KSKK   +KA+K   K +   K K++ +HP + +MI +AIV+LKERTGS
Sbjct: 23  SPEKKPAAKGGKSKKTTTAKATKKPVKAAAPTKKKTTSSHPTYEEMIKDAIVTLKERTGS 82

Query: 78  SQYAITKFNEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSYKLPSARSLQAKAAAAP 137
           SQYAI KF EEKHK LP  FRKLLLV+LK+LVA++KLVKVK S+K+PSARS         
Sbjct: 83  SQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLVKVKASFKIPSARS--------- 142

Query: 138 VAAKKPASSKLKKAASVKKAAVAKPKAKTAVKPKPKAVVKPKTVAKSKAVAKPKAAAAAK 197
                                        A  PKP A V            K KA   AK
Sbjct: 143 -----------------------------AATPKPAAPV------------KKKATVVAK 202

Query: 198 PKAAEKVKKVAPKPKPAAKPAKVAKTLSRTSPGKRAATAAAK---TKKVAAKKPKTVKSP 257
           PKA                    ++T +RTSPGK+ A  A K   TKK  AK  K VKSP
Sbjct: 203 PKA--------------------SRTSTRTSPGKKVAAPAKKVAVTKKAPAKSVK-VKSP 202

Query: 258 ARKVQARKVKK 265
           A++   RK KK
Sbjct: 263 AKRASTRKAKK 202

[Close]

BLAST of Spg003836 vs. TAIR 10
Match: AT2G18050.1 (histone H1-3 )

HSP 1 Score: 60.8 bits (146), Expect = 1.8e-09
Identity = 70/180 (38.89%), Postives = 90/180 (50.00%), Query Frame = 0


Query: 37  KASKAKKPSGAKKTKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFNEEKHKQ-LPSN 96
           K   AKKP   K T    THPP+FQMI EA++ LKE+ GSS YAI K  EEKHK  LP +
Sbjct: 9   KTPAAKKPRKPKTT----THPPYFQMIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLPES 68

Query: 97  FRKLLLVHLKKLVAADKLVKVKNSYKLPSARSLQAKAAAAPVAAKKPASSKLKKAASVKK 156
           FRK L + LK  VA  KLVK++ SYKL     +            +    K KK    + 
Sbjct: 69  FRKTLSLQLKNSVAKGKLVKIRASYKLSDTTKM----------ITRQQDKKNKKNMKQED 128

Query: 157 AAVAKPKAKTAVKPKPKAVVKPKTVAKSKAVAKPKAAAAAKPKAAEKV--KKVAPKPKPA 214
             + K    ++ +PK       KTV+ +K   K K   A +PK+ +    KK A K   A
Sbjct: 129 KEITKRTRSSSTRPK-------KTVSVNKQEKKRKVKKARQPKSIKSSVGKKKAMKASAA 167

[Close]

BLAST of Spg003836 vs. TAIR 10
Match: AT2G18050.2 (histone H1-3 )

HSP 1 Score: 44.3 bits (103), Expect = 1.8e-04
Identity = 57/155 (36.77%), Postives = 76/155 (49.03%), Query Frame = 0


Query: 62  MISEAIVSLKERTGSSQYAITKFNEEKHKQ-LPSNFRKLLLVHLKKLVAADKLVKVKNSY 121
           MI EA++ LKE+ GSS YAI K  EEKHK  LP +FRK L + LK  VA  KLVK++ SY
Sbjct: 1   MIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLPESFRKTLSLQLKNSVAKGKLVKIRASY 60

Query: 122 KLPSARSLQAKAAAAPVAAKKPASSKLKKAASVKKAAVAKPKAKTAVKPKPKAVVKPKTV 181
           KL     +            +    K KK    +   + K    ++ +PK       KTV
Sbjct: 61  KLSDTTKM----------ITRQQDKKNKKNMKQEDKEITKRTRSSSTRPK-------KTV 120

Query: 182 AKSKAVAKPKAAAAAKPKAAEKV--KKVAPKPKPA 214
           + +K   K K   A +PK+ +    KK A K   A
Sbjct: 121 SVNKQEKKRKVKKARQPKSIKSSVGKKKAMKASAA 138

The following BLAST results are available for this feature:

BLAST of Spg003836 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6599320.1	2.9e-97	89.39	Histone H1.2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022946127.1	6.4e-97	89.02	histone H1-like [Cucurbita moschata] >KAG7030316.1 Histone H1.2 [Cucurbita argyr...	[more]
XP_023521173.1	7.1e-96	88.26	histone H1-like [Cucurbita pepo subsp. pepo] >XP_023521452.1 histone H1-like [Cu...	[more]
XP_022999095.1	1.3e-94	87.50	histone H1-like [Cucurbita maxima]	[more]
XP_022142941.1	4.0e-91	87.59	histone H1-like [Momordica charantia]	[more]

BLAST of Spg003836 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P37218	5.7e-40	52.46	Histone H1 OS=Solanum lycopersicum OX=4081 PE=3 SV=1	[more]
Q9M5W4	2.7e-37	57.77	Histone H1 OS=Euphorbia esula OX=3993 PE=2 SV=1	[more]
P26569	1.0e-33	51.75	Histone H1.2 OS=Arabidopsis thaliana OX=3702 GN=At2g30620 PE=1 SV=1	[more]
P23444	1.2e-32	52.11	Histone H1 OS=Zea mays OX=4577 PE=2 SV=2	[more]
P08283	3.1e-30	47.55	Histone H1 OS=Pisum sativum OX=3888 PE=2 SV=1	[more]

BLAST of Spg003836 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G2W2	3.1e-97	89.02	histone H1-like OS=Cucurbita moschata OX=3662 GN=LOC111450301 PE=3 SV=1	[more]
A0A6J1KEC3	6.5e-95	87.50	histone H1-like OS=Cucurbita maxima OX=3661 GN=LOC111493576 PE=3 SV=1	[more]
A0A6J1CNP7	1.9e-91	87.59	histone H1-like OS=Momordica charantia OX=3673 GN=LOC111012938 PE=3 SV=1	[more]
A0A5D3D4H1	9.7e-91	86.57	Histone H1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G0016...	[more]
A0A1S3C278	8.2e-90	86.19	histone H1-like OS=Cucumis melo OX=3656 GN=LOC103496189 PE=3 SV=1	[more]

BLAST of Spg003836 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30620.1	7.4e-35	51.75	winged-helix DNA-binding transcription factor family protein	[more]
AT1G06760.1	1.2e-29	48.12	winged-helix DNA-binding transcription factor family protein	[more]
AT2G30620.2	6.5e-23	41.43	winged-helix DNA-binding transcription factor family protein	[more]
AT2G18050.1	1.8e-09	38.89	histone H1-3	[more]
AT2G18050.2	1.8e-04	36.77	histone H1-3	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005819	Linker histone H1/H5	PRINTS	PR00624	HISTONEH5	coord: 42..63 score: 40.4 coord: 200..219 score: 25.0 coord: 148..162 score: 47.41 coord: 178..195 score: 32.72 coord: 69..86 score: 38.89
IPR005818	Linker histone H1/H5, domain H15	SMART	SM00526	h15plus2	coord: 53..119 e-value: 9.7E-32 score: 121.4
IPR005818	Linker histone H1/H5, domain H15	PFAM	PF00538	Linker_histone	coord: 56..122 e-value: 3.3E-15 score: 56.2
IPR005818	Linker histone H1/H5, domain H15	PROSITE	PS51504	H15	coord: 55..124 score: 28.563246
IPR005818	Linker histone H1/H5, domain H15	CDD	cd00073	H15	coord: 53..127 e-value: 1.54088E-14 score: 65.3351
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 50..141 e-value: 3.1E-19 score: 70.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 241..264
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..264
None	No IPR available	PANTHER	PTHR11467:SF128	SUBFAMILY NOT NAMED	coord: 6..264
None	No IPR available	PANTHER	PTHR11467	HISTONE H1	coord: 6..264
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 52..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg003836.1	Spg003836.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006334	nucleosome assembly
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008168	methyltransferase activity