Spg003813 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg003813
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	CUE domain-containing protein
Location	scaffold4: 47391288 .. 47395268 (-)
RNA-Seq Expression	Spg003813
Synteny	Spg003813

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTCGTTCTTTTAATCTCATCGGTGAGAATATGCAGGCGATGATCGCATTCTTCGCAGCCATGAACGAGGATGAGCCAAAGTCTCAGACCTTCAGATGCTAAAATCCCTTGGAATTGAGTTTGTAGTAATTCAATTTCCATTTCCCGGAGGCTGAAATCCCTAGGAATTGAGTTTGTTACAATTTTGTTTATGGTTGATGAAATCGAGAGGGGTTTGAGTCTAACCTAATCCGATCGTTTTCTTTGCGTTTTTCTTGTTTTCGATCTTGATTGGGGGATTTCTTGAGTTTCTTTTGTTGAATTGGAATTGTTGAAGATGTTTTGGGTTGGATCCGGTGGATTTGCTGCATGAATTGGACGACGGAAGGTTTTGGTGCGGATCGAGCGCTTAGAGAGTAGAGGAAGCTGAGCAGCGGCGCTGAAACATGTCTGCCATAGTGTGCGGGAAGAGATCCTTATTTGAAGACCTGCCTACGCCTCCCGTCTCTAAGAGAATTCGTTGTTCGTCTTCTTCGCCTGTGCGATTTTCGCCTCCGAGGTCATCGAATCAGTCTGCTTTTCCGTCCCCCCCGACGTCCTCCTCGCAATCGGCTCATTTAGTCGATTATCTTAGGGCAATTTTTCCTGATATGGATAAGCAGGTCTGTTTGAGTAAACACCTTTTTTTTTTCTAATGAGGAAATGTAAATTCGAAATGCTTTAGGAATTTCGCGAACTTCACGTTTTGAATTTAAAAAGAACAAGGTAACTCAATCATTGAAATATGAACCATTGGTATTGCTGCTGCTGTTGTTGTCATTTGAAGACATTTCTGATCAAAGGTTTTTGCACTATTAATTCGAGGGAATGTATACTTGAATTCGTACTGATTGCTATGAAATTGATATTTTAGCTTCTAGAGAGAGCACTTGAAGAATGTGGTGATGATCTAGATTTAGCCATCAGAAGTTTGAACCAGCTTCATTTAGGGTATAATGACAGAAACTTGGGAAGTGCTTCAAACACCACCGATGTAGCTTTGGAAGCAAATATTCAACCTCAATCCCAAGGTTTGTATTTGATATCTATTGAACTGCATCTTGGACTTAATAATTATATTCACAATGTTCTGAAATTGCTTTATAGGGAATATTTTGAATTTGACGTCTGTGAGTTCATTAGAGAAGATTTGAATATCTTGTTCATGGGTGAATATTTACTTGTGAAAGTGTTGACATACTCGGAAGTGTTATGTTTTCTGAATAAACCTCTTATTCTACAGATTTGTACTTCTCATGGGAGAAGGAACAATAGGGATTCGTTGTGTGAAGTCATAATTGGCTTACTGGTTAGATTAGTATAACCCAAAGTTAAGAAGTCAAACGTATATTTGGTACATGGATTTGCATCATTTGCTTATCTTTAACTACAAACTTTGGAGTTTGCTAATTCCATAGGCCACATAACCTCCCAATACATAAATACAGATGTATTAAATTCTCTTTTTACATTGTATGTTAACTTCTACAAAGCATATTACACAAACCAAACATGGTTACATTAAATAGAACCAAATCATATACAGATTATACTAATTTAAGCTTTTCAGTTCTAAGTTCCATTTAATTCAAACTTGTAGAAACTGTGAGGCAAACATCCTTAAAAATTGTGCATTTTGTTTTTGTTTTACATTTCTCAGTGCAGCTAGGTTTGTCTCATTCGCCACTCAATCTTGCTTTTGATATCATTTTTATACTTCTAAATCCACTTGACCTGGATTACCGGTAGTAGTTCCATCTAAATTTATAATTTATTAGTAGTGAATGGCTATGCAAAATGAGTGATCTTTTATTTTCTTACCTGAATATCCATGACATTAATAGTTTGGGGACGTCAAGCATTTTTAGGTCGCTAGGACATTGACTGATGAGGAAGTCCGGTTCCTCAATTAATTCAGCTTGGATAGCACAGAGTGCATAGGATCATCCTTGGTGATGTCATGCGGGACTTTCTCATTTCTGATGTTGTCATGCATAGAGGGTTTTTGTTTAAGCTCCTCTGTGACGCAGGCAGATTCTTGCAATTGGAACAAGGACAGTTCCAACATCATTCATGCAAAAGTTTCTTTGATTTTTTGTTGGAGGTTCTTTTGCTGCCAAACGATTATAGGATATATATTTAAGCCTTTTCTACAAATTGTTTTTTATGTAATGTCCCAATGTTTCTAAGTTCAATAGGTTGGATCACTTTTTTGTAACTTCCGTTTGGTATGGAGCGCACCCCTTGCCCGCCTACTCCCCTTTTGTAGTTATCTTTTCTTTCAACATGGTGTTTCTTCCCCCTCCTAGAATTTGGCATAGAGCGAACTCCTCGTTTGCCTACTCCCATGGTGAAGAGTGCACTGTAGCATACCTCTTTCTTGAGCTTTTAATTCCTTGTTTAACAAGCAGAAAAATTTTCTTTTTATATATGTGCGTTTTAGAGTTGAAATTTTTTAAGAGATACTGACGTATTCACTCCATGTCTGATCACACTTATGAACTAAACCATTTGATTGGCAGCATATTATGTAGGCTACGAGACCCTCGATTTTGTCTATAACCTAAGCAATGCAAAGAAGAAAAAAAATCTGTATAAGCGCTTGCAGATATCTTCTGTGCTCATCAACTTGGAATCTCCAGTACCTTTTAAACAGATTATTTATGACAACAGTTTGAATTGTTTCCTTCAAAAGAAAAAATGACAAGAGTTTGAATTATACTTGCAATTTTCGTCTTTAGGCTTCTGGTGCCCTTAGATCCCGTTGTTAGTTACATCTTGTGAATTTCACCTTTTTGTATAAAATGAAGGAGAAACGCAAGGAGAACCTGCAATTGCTGAGGATGCAACCGCTTCTGAGAATCTTCCCACAAATGGGCCAGAATGGGTGGAGCTCTTTGTGAGAGAAATGACAAGTGCCTCGAACATGGATGATGCAAGAAGCCGTGCTTCAAGAGTTCTTGAGGTTCTGGAAAAGTCCATCTGTGCCCGTGCAAATGCAGAGGCAGCAAACAATTTTCATCAGGTTTTAGAACTTTTGCAATTTCTGCTACTTGTTTGTGTCACCAATATTCTGTCACTACAATTGTTGGGGGCTTTACCATGGTTCTTACTTCGTTTATCTAATTTTAGGAAAACAAGATGCTTAGGGAACAAGTGGAAGCACTAATTCAGGAAAACACTATTCTCAAACGAGCTGTCTCTATTCAGCATGAACGTCAGAAAGAATATGAAGGCAGGAACCAGGAGTTACAACATCTTAAGGAATTAGTCTCTCAATATCAGGAGCAATTGAAAACCCTGGAGGTTGGTTCCATAAATGTTATAAAGATCTTGCTTCCTGAGTTATTAAAAGCCACAATTTCTCTTCTAAAAAAAAAAATTCTTAGAACCGGTTTGGAATGACTTTAGCACTTAGAAAGTCATTCCAAACATGCCCTTAATATCATTAACACAATTCTTTATGGTATCACACATTCTTATTGTCTGATATCTCTTGCATCTTTTAATGGACTATAGGTGAATAACTACGCACTTACGGTGCATCTCAAGCAAGCTCAACAAAGTAGCTCCATTCCCGGGCGTTTCCACCCTGATGTTTTCTAATCAGGAACCACTACGTTGAAACTGCAGTGAACTCGATCTTCACAAGATCTCTGTCCTATCAAAATAGTAAGATGATCAACCTGCGCTTCAATCAGTAACATGTTTGTGGATTCCTCTTTTTTATCTAGAAGGTATAAAAGAGTATAAAAGGGTCAAGGCATCTACTTTTCCATCCATCAGTACAGGGATTAATTCCTTTTCTTTCTTTTTGTTGTTTCTGTCCTATTGTTGGACTAAATTTGATTCTCATAGATATTTTTATGTCTTTTCATTACCTGATTATATAGTTCGAAGCTGATTGGAATACAGAGAATAACACTTCAAACAGATTAATGAAAAGTTCTACTACTTTCTTTC

mRNA sequence

ATGTCTGCCATAGTGTGCGGGAAGAGATCCTTATTTGAAGACCTGCCTACGCCTCCCGTCTCTAAGAGAATTCGTTGTTCGTCTTCTTCGCCTGTGCGATTTTCGCCTCCGAGGTCATCGAATCAGTCTGCTTTTCCGTCCCCCCCGACGTCCTCCTCGCAATCGGCTCATTTAGTCGATTATCTTAGGGCAATTTTTCCTGATATGGATAAGCAGCTTCTAGAGAGAGCACTTGAAGAATGTGGTGATGATCTAGATTTAGCCATCAGAAGTTTGAACCAGCTTCATTTAGGGTATAATGACAGAAACTTGGGAAGTGCTTCAAACACCACCGATGTAGCTTTGGAAGCAAATATTCAACCTCAATCCCAAGGTTTGTATTTGATATCTATTGAACTGCATCTTGGACTTAATAATTATATTCACAATGTTCTGAAATTGCTTTATAGGGAATATTTTGAATTTGACGTCTGTGAGTTCATTAGAGAAGATTTGAATATCTTGTTCATGGGTGAATATTTACTTGTGAAAGTGTTGACATACTCGGAAGTGTTATGTTTTCTGAATAAACCTCTTATTCTACAGATTTGA

Coding sequence (CDS)

ATGTCTGCCATAGTGTGCGGGAAGAGATCCTTATTTGAAGACCTGCCTACGCCTCCCGTCTCTAAGAGAATTCGTTGTTCGTCTTCTTCGCCTGTGCGATTTTCGCCTCCGAGGTCATCGAATCAGTCTGCTTTTCCGTCCCCCCCGACGTCCTCCTCGCAATCGGCTCATTTAGTCGATTATCTTAGGGCAATTTTTCCTGATATGGATAAGCAGCTTCTAGAGAGAGCACTTGAAGAATGTGGTGATGATCTAGATTTAGCCATCAGAAGTTTGAACCAGCTTCATTTAGGGTATAATGACAGAAACTTGGGAAGTGCTTCAAACACCACCGATGTAGCTTTGGAAGCAAATATTCAACCTCAATCCCAAGGTTTGTATTTGATATCTATTGAACTGCATCTTGGACTTAATAATTATATTCACAATGTTCTGAAATTGCTTTATAGGGAATATTTTGAATTTGACGTCTGTGAGTTCATTAGAGAAGATTTGAATATCTTGTTCATGGGTGAATATTTACTTGTGAAAGTGTTGACATACTCGGAAGTGTTATGTTTTCTGAATAAACCTCTTATTCTACAGATTTGA

Protein sequence

MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSAFPSPPTSSSQSAHLVDYLRAIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSASNTTDVALEANIQPQSQGLYLISIELHLGLNNYIHNVLKLLYREYFEFDVCEFIREDLNILFMGEYLLVKVLTYSEVLCFLNKPLILQI

Homology

[Close]

BLAST of Spg003813 vs. NCBI nr
Match: XP_022937652.1 (uncharacterized protein LOC111443991 isoform X2 [Cucurbita moschata] >XP_023537696.1 uncharacterized protein LOC111798649 isoform X2 [Cucurbita pepo subsp. pepo] >KAG6586378.1 hypothetical protein SDJN03_19111, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 236.1 bits (601), Expect = 2.6e-58
Identity = 120/124 (96.77%), Postives = 122/124 (98.39%), Query Frame = 0


Query: 1   MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSAFPSPPTSSSQSAHLVD 60
           MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSAFP PPTSSSQSAHLVD
Sbjct: 1   MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSAFPFPPTSSSQSAHLVD 60

Query: 61  YLRAIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSASNTTDVALEANIQ 120
           YL AIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGS+SNT+DVALEANIQ
Sbjct: 61  YLSAIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSSSNTSDVALEANIQ 120

Query: 121 PQSQ 125
           PQSQ
Sbjct: 121 PQSQ 124

[Close]

BLAST of Spg003813 vs. NCBI nr
Match: XP_022937649.1 (uncharacterized protein LOC111443991 isoform X1 [Cucurbita moschata] >XP_022937650.1 uncharacterized protein LOC111443991 isoform X1 [Cucurbita moschata] >XP_023537695.1 uncharacterized protein LOC111798649 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 236.1 bits (601), Expect = 2.6e-58
Identity = 120/124 (96.77%), Postives = 122/124 (98.39%), Query Frame = 0


Query: 1   MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSAFPSPPTSSSQSAHLVD 60
           MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSAFP PPTSSSQSAHLVD
Sbjct: 1   MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSAFPFPPTSSSQSAHLVD 60

Query: 61  YLRAIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSASNTTDVALEANIQ 120
           YL AIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGS+SNT+DVALEANIQ
Sbjct: 61  YLSAIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSSSNTSDVALEANIQ 120

Query: 121 PQSQ 125
           PQSQ
Sbjct: 121 PQSQ 124

[Close]

BLAST of Spg003813 vs. NCBI nr
Match: XP_022965877.1 (uncharacterized protein LOC111465630 isoform X2 [Cucurbita maxima])

HSP 1 Score: 233.4 bits (594), Expect = 1.7e-57
Identity = 120/124 (96.77%), Postives = 121/124 (97.58%), Query Frame = 0


Query: 1   MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSAFPSPPTSSSQSAHLVD 60
           MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSAFP PPTSSSQSAHLVD
Sbjct: 1   MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSAFPFPPTSSSQSAHLVD 60

Query: 61  YLRAIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSASNTTDVALEANIQ 120
           YL AIFPDMDKQLLERALEE GDDLDLAIRSLNQLHLGYNDRNLGSASNT+DVALEANIQ
Sbjct: 61  YLSAIFPDMDKQLLERALEESGDDLDLAIRSLNQLHLGYNDRNLGSASNTSDVALEANIQ 120

Query: 121 PQSQ 125
           PQSQ
Sbjct: 121 PQSQ 124

[Close]

BLAST of Spg003813 vs. NCBI nr
Match: XP_022965876.1 (uncharacterized protein LOC111465630 isoform X1 [Cucurbita maxima])

HSP 1 Score: 233.4 bits (594), Expect = 1.7e-57
Identity = 120/124 (96.77%), Postives = 121/124 (97.58%), Query Frame = 0


Query: 1   MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSAFPSPPTSSSQSAHLVD 60
           MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSAFP PPTSSSQSAHLVD
Sbjct: 1   MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSAFPFPPTSSSQSAHLVD 60

Query: 61  YLRAIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSASNTTDVALEANIQ 120
           YL AIFPDMDKQLLERALEE GDDLDLAIRSLNQLHLGYNDRNLGSASNT+DVALEANIQ
Sbjct: 61  YLSAIFPDMDKQLLERALEESGDDLDLAIRSLNQLHLGYNDRNLGSASNTSDVALEANIQ 120

Query: 121 PQSQ 125
           PQSQ
Sbjct: 121 PQSQ 124

[Close]

BLAST of Spg003813 vs. NCBI nr
Match: XP_038890913.1 (uncharacterized protein LOC120080344 [Benincasa hispida])

HSP 1 Score: 231.9 bits (590), Expect = 4.8e-57
Identity = 119/124 (95.97%), Postives = 120/124 (96.77%), Query Frame = 0


Query: 1   MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSAFPSPPTSSSQSAHLVD 60
           MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQS  P P TSSSQSAHLVD
Sbjct: 1   MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSVSPFPQTSSSQSAHLVD 60

Query: 61  YLRAIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSASNTTDVALEANIQ 120
           YLRAIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSASNT+DVALEANIQ
Sbjct: 61  YLRAIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSASNTSDVALEANIQ 120

Query: 121 PQSQ 125
           PQSQ
Sbjct: 121 PQSQ 124

[Close]

BLAST of Spg003813 vs. ExPASy TrEMBL
Match: A0A6J1FBT3 (uncharacterized protein LOC111443991 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443991 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 1.2e-58
Identity = 120/124 (96.77%), Postives = 122/124 (98.39%), Query Frame = 0


Query: 1   MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSAFPSPPTSSSQSAHLVD 60
           MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSAFP PPTSSSQSAHLVD
Sbjct: 1   MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSAFPFPPTSSSQSAHLVD 60

Query: 61  YLRAIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSASNTTDVALEANIQ 120
           YL AIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGS+SNT+DVALEANIQ
Sbjct: 61  YLSAIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSSSNTSDVALEANIQ 120

Query: 121 PQSQ 125
           PQSQ
Sbjct: 121 PQSQ 124

[Close]

BLAST of Spg003813 vs. ExPASy TrEMBL
Match: A0A6J1FBU0 (uncharacterized protein LOC111443991 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111443991 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 1.2e-58
Identity = 120/124 (96.77%), Postives = 122/124 (98.39%), Query Frame = 0


Query: 1   MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSAFPSPPTSSSQSAHLVD 60
           MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSAFP PPTSSSQSAHLVD
Sbjct: 1   MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSAFPFPPTSSSQSAHLVD 60

Query: 61  YLRAIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSASNTTDVALEANIQ 120
           YL AIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGS+SNT+DVALEANIQ
Sbjct: 61  YLSAIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSSSNTSDVALEANIQ 120

Query: 121 PQSQ 125
           PQSQ
Sbjct: 121 PQSQ 124

[Close]

BLAST of Spg003813 vs. ExPASy TrEMBL
Match: A0A6J1HMV5 (uncharacterized protein LOC111465630 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465630 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 8.0e-58
Identity = 120/124 (96.77%), Postives = 121/124 (97.58%), Query Frame = 0


Query: 1   MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSAFPSPPTSSSQSAHLVD 60
           MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSAFP PPTSSSQSAHLVD
Sbjct: 1   MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSAFPFPPTSSSQSAHLVD 60

Query: 61  YLRAIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSASNTTDVALEANIQ 120
           YL AIFPDMDKQLLERALEE GDDLDLAIRSLNQLHLGYNDRNLGSASNT+DVALEANIQ
Sbjct: 61  YLSAIFPDMDKQLLERALEESGDDLDLAIRSLNQLHLGYNDRNLGSASNTSDVALEANIQ 120

Query: 121 PQSQ 125
           PQSQ
Sbjct: 121 PQSQ 124

[Close]

BLAST of Spg003813 vs. ExPASy TrEMBL
Match: A0A6J1HLH7 (uncharacterized protein LOC111465630 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111465630 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 8.0e-58
Identity = 120/124 (96.77%), Postives = 121/124 (97.58%), Query Frame = 0


Query: 1   MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSAFPSPPTSSSQSAHLVD 60
           MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSAFP PPTSSSQSAHLVD
Sbjct: 1   MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSAFPFPPTSSSQSAHLVD 60

Query: 61  YLRAIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSASNTTDVALEANIQ 120
           YL AIFPDMDKQLLERALEE GDDLDLAIRSLNQLHLGYNDRNLGSASNT+DVALEANIQ
Sbjct: 61  YLSAIFPDMDKQLLERALEESGDDLDLAIRSLNQLHLGYNDRNLGSASNTSDVALEANIQ 120

Query: 121 PQSQ 125
           PQSQ
Sbjct: 121 PQSQ 124

[Close]

BLAST of Spg003813 vs. ExPASy TrEMBL
Match: A0A5D3BFF3 (CUE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00690 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 4.4e-56
Identity = 116/124 (93.55%), Postives = 120/124 (96.77%), Query Frame = 0


Query: 1   MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSAFPSPPTSSSQSAHLVD 60
           MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQS  P P TSSSQSA+LVD
Sbjct: 1   MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSVSPFPQTSSSQSAYLVD 60

Query: 61  YLRAIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSASNTTDVALEANIQ 120
           YLRAIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSASN++DVALEAN+Q
Sbjct: 61  YLRAIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSASNSSDVALEANVQ 120

Query: 121 PQSQ 125
           PQSQ
Sbjct: 121 PQSQ 124

[Close]

BLAST of Spg003813 vs. TAIR 10
Match: AT5G32440.1 (Ubiquitin system component Cue protein )

HSP 1 Score: 129.4 bits (324), Expect = 3.1e-30
Identity = 78/129 (60.47%), Postives = 93/129 (72.09%), Query Frame = 0


Query: 1   MSAIVCGKRSLFEDL--PTPPVSKRIRC-SSSSPVRFSPPRSSNQSAFPSPPTSSSQSAH 60
           MSAIVCGKRSLFEDL   +PPVSK++RC SSSS  RFSP         P PP+SS     
Sbjct: 1   MSAIVCGKRSLFEDLAAASPPVSKKLRCFSSSSSSRFSP---------PIPPSSSL---- 60

Query: 61  LVDYLRAIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSASNTTDVAL-E 120
           L+D+L AIFPDMDKQ+LERA+EECGDDLD AIR LNQL L   ++N  SA+N + V + E
Sbjct: 61  LLDHLAAIFPDMDKQILERAIEECGDDLDSAIRCLNQLRLESANKNSDSATNQSPVVIQE 116

Query: 121 ANIQPQSQG 126
            N++PQ QG
Sbjct: 121 PNVEPQQQG 116

[Close]

BLAST of Spg003813 vs. TAIR 10
Match: AT5G32440.2 (Ubiquitin system component Cue protein )

HSP 1 Score: 129.4 bits (324), Expect = 3.1e-30
Identity = 78/129 (60.47%), Postives = 93/129 (72.09%), Query Frame = 0


Query: 1   MSAIVCGKRSLFEDL--PTPPVSKRIRC-SSSSPVRFSPPRSSNQSAFPSPPTSSSQSAH 60
           MSAIVCGKRSLFEDL   +PPVSK++RC SSSS  RFSP         P PP+SS     
Sbjct: 1   MSAIVCGKRSLFEDLAAASPPVSKKLRCFSSSSSSRFSP---------PIPPSSSL---- 60

Query: 61  LVDYLRAIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSASNTTDVAL-E 120
           L+D+L AIFPDMDKQ+LERA+EECGDDLD AIR LNQL L   ++N  SA+N + V + E
Sbjct: 61  LLDHLAAIFPDMDKQILERAIEECGDDLDSAIRCLNQLRLESANKNSDSATNQSPVVIQE 116

Query: 121 ANIQPQSQG 126
            N++PQ QG
Sbjct: 121 PNVEPQQQG 116

[Close]

BLAST of Spg003813 vs. TAIR 10
Match: AT5G32440.3 (Ubiquitin system component Cue protein )

HSP 1 Score: 129.4 bits (324), Expect = 3.1e-30
Identity = 78/129 (60.47%), Postives = 93/129 (72.09%), Query Frame = 0


Query: 1   MSAIVCGKRSLFEDL--PTPPVSKRIRC-SSSSPVRFSPPRSSNQSAFPSPPTSSSQSAH 60
           MSAIVCGKRSLFEDL   +PPVSK++RC SSSS  RFSP         P PP+SS     
Sbjct: 1   MSAIVCGKRSLFEDLAAASPPVSKKLRCFSSSSSSRFSP---------PIPPSSSL---- 60

Query: 61  LVDYLRAIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSASNTTDVAL-E 120
           L+D+L AIFPDMDKQ+LERA+EECGDDLD AIR LNQL L   ++N  SA+N + V + E
Sbjct: 61  LLDHLAAIFPDMDKQILERAIEECGDDLDSAIRCLNQLRLESANKNSDSATNQSPVVIQE 116

Query: 121 ANIQPQSQG 126
            N++PQ QG
Sbjct: 121 PNVEPQQQG 116

[Close]

BLAST of Spg003813 vs. TAIR 10
Match: AT1G80040.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: Ubiquitin system component Cue protein (TAIR:AT5G32440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 60.1 bits (144), Expect = 2.3e-09
Identity = 40/93 (43.01%), Postives = 55/93 (59.14%), Query Frame = 0


Query: 1  MSAIVCG-KRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSAFPSPPTSSSQSAHLV 60
          MSA+ CG KRS F+D  +PP SKR RC       FSP   SN   + SPP+SS      +
Sbjct: 1  MSAVYCGTKRSYFDDNSSPPSSKRFRC-------FSP---SNSPIWSSPPSSS------L 60

Query: 61 DYLRAIFPDMDKQLLERALEECGDDLDLAIRSL 93
          D L + FP ++  +L +ALE+ G D + A++SL
Sbjct: 61 DQLHSAFPHIELTVLVKALEDNGSDFNAAMKSL 77

[Close]

BLAST of Spg003813 vs. TAIR 10
Match: AT1G80040.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: Ubiquitin system component Cue protein (TAIR:AT5G32440.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 60.1 bits (144), Expect = 2.3e-09
Identity = 40/93 (43.01%), Postives = 55/93 (59.14%), Query Frame = 0


Query: 1  MSAIVCG-KRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSAFPSPPTSSSQSAHLV 60
          MSA+ CG KRS F+D  +PP SKR RC       FSP   SN   + SPP+SS      +
Sbjct: 1  MSAVYCGTKRSYFDDNSSPPSSKRFRC-------FSP---SNSPIWSSPPSSS------L 60

Query: 61 DYLRAIFPDMDKQLLERALEECGDDLDLAIRSL 93
          D L + FP ++  +L +ALE+ G D + A++SL
Sbjct: 61 DQLHSAFPHIELTVLVKALEDNGSDFNAAMKSL 77

The following BLAST results are available for this feature:

BLAST of Spg003813 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022937652.1	2.6e-58	96.77	uncharacterized protein LOC111443991 isoform X2 [Cucurbita moschata] >XP_0235376...	[more]
XP_022937649.1	2.6e-58	96.77	uncharacterized protein LOC111443991 isoform X1 [Cucurbita moschata] >XP_0229376...	[more]
XP_022965877.1	1.7e-57	96.77	uncharacterized protein LOC111465630 isoform X2 [Cucurbita maxima]	[more]
XP_022965876.1	1.7e-57	96.77	uncharacterized protein LOC111465630 isoform X1 [Cucurbita maxima]	[more]
XP_038890913.1	4.8e-57	95.97	uncharacterized protein LOC120080344 [Benincasa hispida]	[more]

BLAST of Spg003813 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg003813 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FBT3	1.2e-58	96.77	uncharacterized protein LOC111443991 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1FBU0	1.2e-58	96.77	uncharacterized protein LOC111443991 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1HMV5	8.0e-58	96.77	uncharacterized protein LOC111465630 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HLH7	8.0e-58	96.77	uncharacterized protein LOC111465630 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5D3BFF3	4.4e-56	93.55	CUE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]

BLAST of Spg003813 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G32440.1	3.1e-30	60.47	Ubiquitin system component Cue protein	[more]
AT5G32440.2	3.1e-30	60.47	Ubiquitin system component Cue protein	[more]
AT5G32440.3	3.1e-30	60.47	Ubiquitin system component Cue protein	[more]
AT1G80040.1	2.3e-09	43.01	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT1G80040.2	2.3e-09	43.01	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003892	Ubiquitin system component CUE	PFAM	PF02845	CUE	coord: 59..94 e-value: 7.9E-6 score: 25.5
IPR003892	Ubiquitin system component CUE	PROSITE	PS51140	CUE	coord: 54..97 score: 12.313545
None	No IPR available	GENE3D	1.10.8.10		coord: 49..97 e-value: 4.5E-7 score: 31.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..54
None	No IPR available	PANTHER	PTHR31245:SF18	SUBFAMILY NOT NAMED	coord: 1..125
None	No IPR available	PANTHER	PTHR31245	UBIQUITIN SYSTEM COMPONENT CUE PROTEIN	coord: 1..125
None	No IPR available	CDD	cd14279	CUE	coord: 58..92 e-value: 2.35967E-9 score: 49.0037
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 49..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg003813.1	Spg003813.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0043130	ubiquitin binding
molecular_function	GO:0005515	protein binding