Spg003670 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg003670
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	zinc finger Ran-binding domain-containing protein 2-like
Location	scaffold4: 47816640 .. 47817937 (+)
RNA-Seq Expression	Spg003670
Synteny	Spg003670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACAAAACCCTCACAAAACTTCCACAAAACCCTTCACAAAAGCACAAACAAACTAAACTTCCAATAAGGTGAGAGCTTTTCCTCAATGTCCTTTCATTTCTTCTTTTACTTTCTTTTGCATTTCTAGGATATATATTTCTCCAAACTCTTGTTGGATCTTATTGATTTTGATTCAATCGTATCGTAGAGAGAAGACGATGAATATGAATTGGTCAGGAGGTGACTGGATGTGTGGTGTGTGTGAACATGTGAACTTCAAAAAGAGAGAAGCTTGTCAACGATGTGGGTACCCGAAATATGGTGGTCCAGACCCGACAACCTACGAGTACAATAAGACAGAAGTCTTGGCAGGAGATTGGTATTGCAATTGTGGAGCTCACAACTACGCCAATAGGTCAAGTTGCTATAGATGTAATTCATATAAGAGTGTCGATATTGGTGCCTTGCCTGGTTGGAAATCTGGAGATTGGATCTGCAATAGGTAAGTGTTCATTTCATGATATATATGTTAGAGTTTCTTCAAATCATCTACATTTTCAACAATGCTTTTTTTTTTAAAAAAAAAAAATTGTTGAATTTGTGTGCAGAATAGGATGTGAAACGCACAATTATGCTAGCAGGATGGAATGCTACAAATGCAAAACTCCAAGGGATTTTGGTAAGAAGATCAGATTTTGGAGACTTTATAAATATACGATTGTGTTAAACATTTTGATTTTCAAATATATATGATGTTTAGTTAACCATAGAAATCTGAACATATATAGAGTTAAACATATTGAGATTAGTAGGGAATCAAATTTCTGACCTTTTGATCAATATTATAATGTCTTAACCCTGACCGTTTAACTATATGCTCGAGCTGACAAATGCATGGGTGTTTTTCATTATAACTAATAATTGATATATACATTTTTTTTAACAGGTGGAGCTGTTTGAAGAAACTAATTTTTGAAGAACTCTTAGTGATGCTAATACTTGGCCAACTTACAAAGCTTCTTGGCATCTGATGCTCTCCAATTTGCTTTTTTTTTTTTTCCTTTTTGGGATTGGGGCTCTAATGCAATGAAAATCTTAAGAATTCCCTTTCTTAATCTCACTTTTCAACTAATTAATTAGAATTATACACTTTGTTGTCTCTCTCTCTCTTTTTACCATTGAATTTCAAGGTCTCATTCTTGGGCCACCAACCAAGGGCTTTGAATTATGCCAAAGAGATAGAAGTGTATAAGAGAATAATATTACAACTTTGAGATTCAAGAATCTACTTCCCAATAATACACTCAAAAGGATAGAC

mRNA sequence

ATGAATATGAATTGGTCAGGAGGTGACTGGATGTGTGGTGTGTGTGAACATGTGAACTTCAAAAAGAGAGAAGCTTGTCAACGATGTGGGTACCCGAAATATGGTGGTCCAGACCCGACAACCTACGAGTACAATAAGACAGAAGTCTTGGCAGGAGATTGGTATTGCAATTGTGGAGCTCACAACTACGCCAATAGGTCAAGTTGCTATAGATGTAATTCATATAAGAGTGTCGATATTGGTGCCTTGCCTGGTTGGAAATCTGGAGATTGGATCTGCAATAGAATAGGATGTGAAACGCACAATTATGCTAGCAGGATGGAATGCTACAAATGCAAAACTCCAAGGGATTTTGGTAAGAAGATCAGATTTTGGAGACTTTATAAATATACGATTGTGTGGAGCTGTTTGAAGAAACTAATTTTTGAAGAACTCTTAGTGATGCTAATACTTGGCCAACTTACAAAGCTTCTTGGCATCTGA

Coding sequence (CDS)

ATGAATATGAATTGGTCAGGAGGTGACTGGATGTGTGGTGTGTGTGAACATGTGAACTTCAAAAAGAGAGAAGCTTGTCAACGATGTGGGTACCCGAAATATGGTGGTCCAGACCCGACAACCTACGAGTACAATAAGACAGAAGTCTTGGCAGGAGATTGGTATTGCAATTGTGGAGCTCACAACTACGCCAATAGGTCAAGTTGCTATAGATGTAATTCATATAAGAGTGTCGATATTGGTGCCTTGCCTGGTTGGAAATCTGGAGATTGGATCTGCAATAGAATAGGATGTGAAACGCACAATTATGCTAGCAGGATGGAATGCTACAAATGCAAAACTCCAAGGGATTTTGGTAAGAAGATCAGATTTTGGAGACTTTATAAATATACGATTGTGTGGAGCTGTTTGAAGAAACTAATTTTTGAAGAACTCTTAGTGATGCTAATACTTGGCCAACTTACAAAGCTTCTTGGCATCTGA

Protein sequence

MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYCNCGAHNYANRSSCYRCNSYKSVDIGALPGWKSGDWICNRIGCETHNYASRMECYKCKTPRDFGKKIRFWRLYKYTIVWSCLKKLIFEELLVMLILGQLTKLLGI

Homology

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BLAST of Spg003670 vs. NCBI nr
Match: XP_022966014.1 (zinc finger Ran-binding domain-containing protein 2-like [Cucurbita maxima])

HSP 1 Score: 277.3 bits (708), Expect = 8.2e-71
Identity = 114/119 (95.80%), Postives = 118/119 (99.16%), Query Frame = 0


Query: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYCNCGA 60
           MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYE+NKTEVLAGDWYC+CGA
Sbjct: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEFNKTEVLAGDWYCHCGA 60

Query: 61  HNYANRSSCYRCNSYKSVDIGALPGWKSGDWICNRIGCETHNYASRMECYKCKTPRDFG 120
           HNYA+RSSCYRCN+YKS DIGALPGWKSGDWICNRIGCETHNYASRMECYKCKTPRDFG
Sbjct: 61  HNYASRSSCYRCNAYKSADIGALPGWKSGDWICNRIGCETHNYASRMECYKCKTPRDFG 119

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BLAST of Spg003670 vs. NCBI nr
Match: XP_023538268.1 (zinc finger Ran-binding domain-containing protein 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 275.8 bits (704), Expect = 2.4e-70
Identity = 113/119 (94.96%), Postives = 118/119 (99.16%), Query Frame = 0


Query: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYCNCGA 60
           MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TYE+NKTEVLAGDWYC+CGA
Sbjct: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSTYEFNKTEVLAGDWYCHCGA 60

Query: 61  HNYANRSSCYRCNSYKSVDIGALPGWKSGDWICNRIGCETHNYASRMECYKCKTPRDFG 120
           HNYA+RSSCYRCN+YKS DIGALPGWKSGDWICNRIGCETHNYASRMECYKCKTPRDFG
Sbjct: 61  HNYASRSSCYRCNAYKSADIGALPGWKSGDWICNRIGCETHNYASRMECYKCKTPRDFG 119

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BLAST of Spg003670 vs. NCBI nr
Match: KAG6586405.1 (hypothetical protein SDJN03_19138, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 273.5 bits (698), Expect = 1.2e-69
Identity = 112/119 (94.12%), Postives = 117/119 (98.32%), Query Frame = 0


Query: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYCNCGA 60
           MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TYE+NKTEVLAGDWYC+CGA
Sbjct: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSTYEFNKTEVLAGDWYCHCGA 60

Query: 61  HNYANRSSCYRCNSYKSVDIGALPGWKSGDWICNRIGCETHNYASRMECYKCKTPRDFG 120
           HNYA+R SCYRCN+YKS DIGALPGWKSGDWICNRIGCETHNYASRMECYKCKTPRDFG
Sbjct: 61  HNYASRLSCYRCNAYKSADIGALPGWKSGDWICNRIGCETHNYASRMECYKCKTPRDFG 119

[Close]

BLAST of Spg003670 vs. NCBI nr
Match: XP_022937997.1 (zinc finger Ran-binding domain-containing protein 2-like [Cucurbita moschata])

HSP 1 Score: 270.4 bits (690), Expect = 1.0e-68
Identity = 111/119 (93.28%), Postives = 117/119 (98.32%), Query Frame = 0


Query: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYCNCGA 60
           MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TYE+NKTEVLAGDWYC+CGA
Sbjct: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSTYEFNKTEVLAGDWYCHCGA 60

Query: 61  HNYANRSSCYRCNSYKSVDIGALPGWKSGDWICNRIGCETHNYASRMECYKCKTPRDFG 120
           HNYA+RSSCYRCN+YKS DI ALPGWKSGDWICNRIGCETHNYASRMECYKCKTPR+FG
Sbjct: 61  HNYASRSSCYRCNAYKSADICALPGWKSGDWICNRIGCETHNYASRMECYKCKTPRNFG 119

[Close]

BLAST of Spg003670 vs. NCBI nr
Match: XP_008457786.1 (PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Cucumis melo] >XP_008457794.1 PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Cucumis melo])

HSP 1 Score: 256.9 bits (655), Expect = 1.1e-64
Identity = 112/128 (87.50%), Postives = 117/128 (91.41%), Query Frame = 0


Query: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTY-EYN------KTEVLAGD 60
           MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TY +YN        EVLAGD
Sbjct: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSTYDQYNIIHSKSTDEVLAGD 60

Query: 61  WYCNCGAHNYANRSSCYRCNS--YKSVDIGALPGWKSGDWICNRIGCETHNYASRMECYK 120
           WYCNCGAHNYA+RSSCYRCNS  YKS+DIGALPGWKSGDWIC+RIGCETHNYASRMECYK
Sbjct: 61  WYCNCGAHNYASRSSCYRCNSNAYKSLDIGALPGWKSGDWICSRIGCETHNYASRMECYK 120

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BLAST of Spg003670 vs. ExPASy Swiss-Prot
Match: Q5ZLX5 (Zinc finger Ran-binding domain-containing protein 2 OS=Gallus gallus OX=9031 GN=ZRANB2 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 4.6e-08
Identity = 36/101 (35.64%), Postives = 47/101 (46.53%), Query Frame = 0


Query: 2   NMNWSGGDWMC--GVCEHVNFKKREACQRCG--------YPKYGGPD--PTTYEYNKTEV 61
           N   S GDW+C    C +VNF +R +C RCG          K GG +   T  E ++   
Sbjct: 5   NFRVSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKSRGLF 64

Query: 62  LAGDWYC-NCGAHNYANRSSCYRCNSYKSVDIGALPGWKSG 90
            A DW C  CG  N+A RS C  CN+ K   +    G+  G
Sbjct: 65  SANDWQCKTCGNVNWARRSECNMCNTPKYAKLEERTGYGGG 105

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BLAST of Spg003670 vs. ExPASy Swiss-Prot
Match: O95218 (Zinc finger Ran-binding domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ZRANB2 PE=1 SV=2)

HSP 1 Score: 57.0 bits (136), Expect = 2.3e-07
Identity = 35/101 (34.65%), Postives = 46/101 (45.54%), Query Frame = 0


Query: 2   NMNWSGGDWMC--GVCEHVNFKKREACQRCG--------YPKYGGPD--PTTYEYNKTEV 61
           N   S GDW+C    C +VNF +R +C RCG          K GG +   T  E ++   
Sbjct: 5   NFRVSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKSRGLF 64

Query: 62  LAGDWYC-NCGAHNYANRSSCYRCNSYKSVDIGALPGWKSG 90
            A DW C  C   N+A RS C  CN+ K   +    G+  G
Sbjct: 65  SANDWQCKTCSNVNWARRSECNMCNTPKYAKLEERTGYGGG 105

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BLAST of Spg003670 vs. ExPASy Swiss-Prot
Match: Q9R020 (Zinc finger Ran-binding domain-containing protein 2 OS=Mus musculus OX=10090 GN=Zranb2 PE=1 SV=2)

HSP 1 Score: 57.0 bits (136), Expect = 2.3e-07
Identity = 35/101 (34.65%), Postives = 46/101 (45.54%), Query Frame = 0


Query: 2   NMNWSGGDWMC--GVCEHVNFKKREACQRCG--------YPKYGGPD--PTTYEYNKTEV 61
           N   S GDW+C    C +VNF +R +C RCG          K GG +   T  E ++   
Sbjct: 5   NFRVSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKSRGLF 64

Query: 62  LAGDWYC-NCGAHNYANRSSCYRCNSYKSVDIGALPGWKSG 90
            A DW C  C   N+A RS C  CN+ K   +    G+  G
Sbjct: 65  SANDWQCKTCSNVNWARRSECNMCNTPKYAKLEERTGYGGG 105

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BLAST of Spg003670 vs. ExPASy Swiss-Prot
Match: Q19QU3 (Zinc finger Ran-binding domain-containing protein 2 OS=Sus scrofa OX=9823 GN=ZRANB2 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.3e-07
Identity = 35/101 (34.65%), Postives = 46/101 (45.54%), Query Frame = 0


Query: 2   NMNWSGGDWMC--GVCEHVNFKKREACQRCG--------YPKYGGPD--PTTYEYNKTEV 61
           N   S GDW+C    C +VNF +R +C RCG          K GG +   T  E ++   
Sbjct: 5   NFRVSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKSRGLF 64

Query: 62  LAGDWYC-NCGAHNYANRSSCYRCNSYKSVDIGALPGWKSG 90
            A DW C  C   N+A RS C  CN+ K   +    G+  G
Sbjct: 65  SANDWQCKTCSNVNWARRSECNMCNTPKYAKLEERTGYGGG 105

[Close]

BLAST of Spg003670 vs. ExPASy Swiss-Prot
Match: Q5R580 (Zinc finger Ran-binding domain-containing protein 2 OS=Pongo abelii OX=9601 GN=ZRANB2 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.3e-07
Identity = 35/101 (34.65%), Postives = 46/101 (45.54%), Query Frame = 0


Query: 2   NMNWSGGDWMC--GVCEHVNFKKREACQRCG--------YPKYGGPD--PTTYEYNKTEV 61
           N   S GDW+C    C +VNF +R +C RCG          K GG +   T  E ++   
Sbjct: 5   NFRVSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKSRGLF 64

Query: 62  LAGDWYC-NCGAHNYANRSSCYRCNSYKSVDIGALPGWKSG 90
            A DW C  C   N+A RS C  CN+ K   +    G+  G
Sbjct: 65  SANDWQCKTCSNVNWARRSECNMCNTPKYAKLEERTGYGGG 105

[Close]

BLAST of Spg003670 vs. ExPASy TrEMBL
Match: A0A6J1HSH3 (zinc finger Ran-binding domain-containing protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111465727 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 3.9e-71
Identity = 114/119 (95.80%), Postives = 118/119 (99.16%), Query Frame = 0


Query: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYCNCGA 60
           MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYE+NKTEVLAGDWYC+CGA
Sbjct: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEFNKTEVLAGDWYCHCGA 60

Query: 61  HNYANRSSCYRCNSYKSVDIGALPGWKSGDWICNRIGCETHNYASRMECYKCKTPRDFG 120
           HNYA+RSSCYRCN+YKS DIGALPGWKSGDWICNRIGCETHNYASRMECYKCKTPRDFG
Sbjct: 61  HNYASRSSCYRCNAYKSADIGALPGWKSGDWICNRIGCETHNYASRMECYKCKTPRDFG 119

[Close]

BLAST of Spg003670 vs. ExPASy TrEMBL
Match: A0A6J1FCS1 (zinc finger Ran-binding domain-containing protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111444219 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 4.8e-69
Identity = 111/119 (93.28%), Postives = 117/119 (98.32%), Query Frame = 0


Query: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYCNCGA 60
           MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TYE+NKTEVLAGDWYC+CGA
Sbjct: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSTYEFNKTEVLAGDWYCHCGA 60

Query: 61  HNYANRSSCYRCNSYKSVDIGALPGWKSGDWICNRIGCETHNYASRMECYKCKTPRDFG 120
           HNYA+RSSCYRCN+YKS DI ALPGWKSGDWICNRIGCETHNYASRMECYKCKTPR+FG
Sbjct: 61  HNYASRSSCYRCNAYKSADICALPGWKSGDWICNRIGCETHNYASRMECYKCKTPRNFG 119

[Close]

BLAST of Spg003670 vs. ExPASy TrEMBL
Match: A0A0A0LIX1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006080 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 8.5e-66
Identity = 114/139 (82.01%), Postives = 122/139 (87.77%), Query Frame = 0


Query: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTY-EYN------KTEVLAGD 60
           MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTY +YN        EVLAGD
Sbjct: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGD 60

Query: 61  WYCNCGAHNYANRSSCYRCNS--YKSVDIGALPGWKSGDWICNRIGCETHNYASRMECYK 120
           WYCNCGAHNYA+RSSCY+CNS  YKS+DIGALPGWKSGDWIC+RIGCETHNYASRMECYK
Sbjct: 61  WYCNCGAHNYASRSSCYKCNSNAYKSLDIGALPGWKSGDWICSRIGCETHNYASRMECYK 120

Query: 121 CKTPRDFGKKIRFWRLYKY 131
           CK PR FGK I+F  L+ +
Sbjct: 121 CKAPRHFGKNIKFSSLFLF 139

[Close]

BLAST of Spg003670 vs. ExPASy TrEMBL
Match: A0A1S3C6B6 (uncharacterized RNA-binding protein C17H9.04c OS=Cucumis melo OX=3656 GN=LOC103497392 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 5.5e-65
Identity = 112/128 (87.50%), Postives = 117/128 (91.41%), Query Frame = 0


Query: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTY-EYN------KTEVLAGD 60
           MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TY +YN        EVLAGD
Sbjct: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSTYDQYNIIHSKSTDEVLAGD 60

Query: 61  WYCNCGAHNYANRSSCYRCNS--YKSVDIGALPGWKSGDWICNRIGCETHNYASRMECYK 120
           WYCNCGAHNYA+RSSCYRCNS  YKS+DIGALPGWKSGDWIC+RIGCETHNYASRMECYK
Sbjct: 61  WYCNCGAHNYASRSSCYRCNSNAYKSLDIGALPGWKSGDWICSRIGCETHNYASRMECYK 120

[Close]

BLAST of Spg003670 vs. ExPASy TrEMBL
Match: A0A6J1CPG4 (uncharacterized RNA-binding protein C17H9.04c-like OS=Momordica charantia OX=3673 GN=LOC111013106 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 4.7e-64
Identity = 109/125 (87.20%), Postives = 116/125 (92.80%), Query Frame = 0


Query: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTE---VLAGDWYCN 60
           MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEY+KT+   +LAGDWYCN
Sbjct: 3   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQALLAGDWYCN 62

Query: 61  CGAHNYANRSSCYRCNS--YKSVD-IGALPGWKSGDWICNRIGCETHNYASRMECYKCKT 120
           CGAHNYA+RS+CYRCNS  +K+VD IGALPGWKSGDWIC RIGCE HNYASRMECYKC T
Sbjct: 63  CGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGDWICTRIGCEMHNYASRMECYKCNT 122

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BLAST of Spg003670 vs. TAIR 10
Match: AT2G26695.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 196.4 bits (498), Expect = 1.7e-50
Identity = 79/136 (58.09%), Postives = 99/136 (72.79%), Query Frame = 0


Query: 3   MNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYC---NCG 62
           M+W+GGDW+CG C+H NFKKRE+CQ+CGYPK+GG D +TY YN+TEV+AGDWYC   NCG
Sbjct: 1   MSWTGGDWLCGACQHANFKKRESCQKCGYPKFGGVDVSTYLYNRTEVMAGDWYCGALNCG 60

Query: 63  AHNYANRSSCYRCN----------------SYKSVDIGALPGWKSGDWICNRIGCETHNY 120
           +HNYA+R+SCYRC                 +Y +      PGWK+GDW+C R+GC  HNY
Sbjct: 61  SHNYASRTSCYRCGMIKVEYTEQYYGAQMVAYGNDGAACPPGWKTGDWVCPRVGCGVHNY 120

[Close]

BLAST of Spg003670 vs. TAIR 10
Match: AT3G15680.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 134.8 bits (338), Expect = 6.1e-32
Identity = 62/160 (38.75%), Postives = 85/160 (53.12%), Query Frame = 0


Query: 8   GDWMCGVCEHVNFKKREACQRCG-------------YPKYGGPDPTTYEYNK-TEVLAGD 67
           GDW C  C H+NF++R++CQRCG             +  +GG   + + +   ++V  GD
Sbjct: 5   GDWNCRSCSHLNFQRRDSCQRCGDSRSGPGGVGGLDFGNFGGRAMSAFGFTTGSDVRPGD 64

Query: 68  WYC---NCGAHNYANRSSCYRCNSYK------------------SVDI--------GALP 125
           WYC   NCG HN+A+RS+C++C ++K                    DI        G   
Sbjct: 65  WYCTVGNCGTHNFASRSTCFKCGTFKDETGAGGGGGGIGGPAMFDADIMRSRVPGNGGRS 124

[Close]

BLAST of Spg003670 vs. TAIR 10
Match: AT5G25490.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 124.0 bits (310), Expect = 1.1e-28
Identity = 59/159 (37.11%), Postives = 83/159 (52.20%), Query Frame = 0


Query: 8   GDWMCGVCEHVNFKKREACQRCGYPKYGG------------PDPTTYEYNK-TEVLAGDW 67
           GDW C +C H+NF++R++CQRC  P+ GG            P  +++ +N   +V  GDW
Sbjct: 5   GDWNCRLCSHLNFQRRDSCQRCREPRPGGISTDLLSGFGGRPVSSSFGFNTGPDVRPGDW 64

Query: 68  YCN---CGAHNYANRSSCYRCNSYK---------------SVDIGALPG----------- 118
           YCN   CG HN+ANRSSC++C + K                +++G   G           
Sbjct: 65  YCNLGDCGTHNFANRSSCFKCGAAKDEFSCSSAAATTGFMDMNVGPRRGLFGFGGSSSGG 124

[Close]

BLAST of Spg003670 vs. TAIR 10
Match: AT1G48570.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 67.8 bits (164), Expect = 9.1e-12
Identity = 35/110 (31.82%), Postives = 51/110 (46.36%), Query Frame = 0


Query: 8   GDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYC-NCGAHNYANR 67
           GDW+C  C  +NF + ++C +C   K  GP  T+   N  E+  GDW C  CG  N+A+ 
Sbjct: 338 GDWLCPECSFLNFTRNQSCLKC---KAKGPKKTSM-VNIVEMKKGDWNCTGCGYMNFASN 397

Query: 68  SSCYRCNSYKSVDIGALPGWKSGDWICNRIGCETHNYASRMECYKCKTPR 117
             C  C   +   +      + GDW C    C+  N+     C KC+  R
Sbjct: 398 KQCRECREQRHKTLA-----EPGDWECP--SCDFVNFRRNDACKKCECKR 436

[Close]

BLAST of Spg003670 vs. TAIR 10
Match: AT2G17975.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 63.9 bits (154), Expect = 1.3e-10
Identity = 43/143 (30.07%), Postives = 62/143 (43.36%), Query Frame = 0


Query: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDW---YCN 60
           ++  W  GDW+C  C   N+  R  C++C       P     +   +E LA +W     N
Sbjct: 122 VHKEWRSGDWICR-CGFHNYSSRIQCKKCNEI---APLALGTKRLASEALAHEWDSKRLN 181

Query: 61  CGAHNYANRSSCYRCNSYKSVDIG------------------ALPG-----WKSGDWICN 118
            G  +   +S+ Y   S+  + +G                  AL G     W+ GDW+C 
Sbjct: 182 QGYTSMQTQSAIYA--SFPGMSLGRVSNWQLPLPFLQQHSTPALLGMGVKQWRDGDWMCT 241

The following BLAST results are available for this feature:

BLAST of Spg003670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022966014.1	8.2e-71	95.80	zinc finger Ran-binding domain-containing protein 2-like [Cucurbita maxima]	[more]
XP_023538268.1	2.4e-70	94.96	zinc finger Ran-binding domain-containing protein 2-like [Cucurbita pepo subsp. ...	[more]
KAG6586405.1	1.2e-69	94.12	hypothetical protein SDJN03_19138, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022937997.1	1.0e-68	93.28	zinc finger Ran-binding domain-containing protein 2-like [Cucurbita moschata]	[more]
XP_008457786.1	1.1e-64	87.50	PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Cucumis melo] >XP_0084...	[more]

BLAST of Spg003670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5ZLX5	4.6e-08	35.64	Zinc finger Ran-binding domain-containing protein 2 OS=Gallus gallus OX=9031 GN=...	[more]
O95218	2.3e-07	34.65	Zinc finger Ran-binding domain-containing protein 2 OS=Homo sapiens OX=9606 GN=Z...	[more]
Q9R020	2.3e-07	34.65	Zinc finger Ran-binding domain-containing protein 2 OS=Mus musculus OX=10090 GN=...	[more]
Q19QU3	2.3e-07	34.65	Zinc finger Ran-binding domain-containing protein 2 OS=Sus scrofa OX=9823 GN=ZRA...	[more]
Q5R580	2.3e-07	34.65	Zinc finger Ran-binding domain-containing protein 2 OS=Pongo abelii OX=9601 GN=Z...	[more]

BLAST of Spg003670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HSH3	3.9e-71	95.80	zinc finger Ran-binding domain-containing protein 2-like OS=Cucurbita maxima OX=...	[more]
A0A6J1FCS1	4.8e-69	93.28	zinc finger Ran-binding domain-containing protein 2-like OS=Cucurbita moschata O...	[more]
A0A0A0LIX1	8.5e-66	82.01	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006080 PE=4 SV=1	[more]
A0A1S3C6B6	5.5e-65	87.50	uncharacterized RNA-binding protein C17H9.04c OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A6J1CPG4	4.7e-64	87.20	uncharacterized RNA-binding protein C17H9.04c-like OS=Momordica charantia OX=367...	[more]

BLAST of Spg003670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G26695.1	1.7e-50	58.09	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT3G15680.1	6.1e-32	38.75	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT5G25490.1	1.1e-28	37.11	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT1G48570.1	9.1e-12	31.82	zinc finger (Ran-binding) family protein	[more]
AT2G17975.1	1.3e-10	30.07	zinc finger (Ran-binding) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	zf_4	coord: 52..75 e-value: 0.002 score: 27.4 coord: 8..32 e-value: 4.3E-6 score: 36.2 coord: 89..115 e-value: 1.0E-5 score: 35.0
IPR001876	Zinc finger, RanBP2-type	PFAM	PF00641	zf-RanBP	coord: 87..116 e-value: 1.1E-7 score: 31.0 coord: 8..34 e-value: 4.4E-4 score: 19.5
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 10..29
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 91..112
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 87..118 score: 9.687219
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 6..35 score: 8.817719
None	No IPR available	GENE3D	4.10.1060.10		coord: 42..77 e-value: 5.9E-9 score: 37.0 coord: 1..37 e-value: 1.1E-9 score: 39.4 coord: 84..118 e-value: 2.5E-10 score: 41.5
None	No IPR available	PANTHER	PTHR23111	ZINC FINGER PROTEIN	coord: 2..121
None	No IPR available	PANTHER	PTHR23111:SF41	ZINC FINGER, RANBP2-TYPE-RELATED	coord: 2..121
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 45..78
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 86..118
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 2..36

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg003670.1	Spg003670.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding