Spg003650 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg003650
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	transcription termination factor MTERF4, chloroplastic
Location	scaffold4: 43980482 .. 43982053 (+)
RNA-Seq Expression	Spg003650
Synteny	Spg003650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTAGAGGCCATGCTGGTGTGGTAAAACCTAATTTTTCCATCATGTTACTCGAGATGCCTACTCTTAAATGTCACAAGTTCAAATTTACTACCACATCAACTTTTCAAACGCATCCTAACCATGAGAAAAGGAGGGGTTTGATTACAAAGCTACAATACTCTCAAGGCGATAGGAGAACAGTATCCAAATCTATGCATTCAACTATTACATCAAAGCCTTACAGTTCTCAGGTGGGTAGAAAAGAGGGAAGTGCTTCATCGTTGTATAGTCGCCCTAGCTTAGTGGAGATGAAGAATGTGAGGTTGGAAAATCGTGCAAAGGTTTATGAGTTCTTGCGTGGAATTGGTGTTGTTCCTGATGAGCTAGATGGATTGGAGCTTCCTGTAACAGTTGATGTTATGAAGGAACGTGTCGATTTTCTTCTCAAATTGGGGCTTACAATTGAAGATATAAACAACTACCCTCTTGTTCTTGGTTGCAGTGTTAAGAAAAATATGATACCAGTACTTGATTACCTTGGTAAATTGGGTGTTAGGAAATCTACTTTCACTGAGTTCTTAAGAAGGTATCCACAAGTCCTCCATTCTAGCGTTGTTGTAGACCTTGCTCCAGTAGTAAAGTATCTTCAAGGCATGGATATTAAGCCAAGTGATGTCCCGCGCGTTCTTGAGAGATATCCGGAAGTATTGGGCTTCAAGCTTGAGGGAACCATGAGCACTTCAGTGGCATACTTGGTAGGAATTGGAGTGGCAAGAAGAGAAATAGGAGGGGTCTTGACCAAATACCCTGAAATTTTGGGAATGAGGGTCGCTCGGGTAATCAAGCCTTTTGTCGATTATCTTGAAAGTTTGGGCATTCCAAGATTAGCAGTGGCTAGGTTAATAGAGAAACGACCACACATTCTAGGGTTTGGATTGGAAAAAAAGGTCAAACCCAATATCCAATTGCTATTGGAGTTTAATGTAAGAGAAGCATACCTTTCTTCTATAGTTGCACAATATGCTGAGATCATAGGAATGGACCTTGAGACTAAGCTTCCAAGTCAAAGGAACTTACTAAAATCAATAATCGAATTGGATAATGATAACTTTGGCACTATAATTGAAAAGATGCCGCAAATTGTTAGCCTTAGCAGTTCAGCTGTGATCAACCATGTGGATTTCTTGAAGAGTTGTGGGTTTTCCTTACTGCAAGTAAAGAACATGGTTGTTGGTTGCCCCCAATTGCTTGCTTTGAATATTGACATAATGAAACACAGCTTTCAATTCTTCCAAAAGGAGATGGGAAGGCCTTTAGACGATTTAGTTGCTTTTCCTGCATTCTTTACTTATGGTCTGGAGTCCACAATAAAGCCCAGACATAGGAAGGTTGTGCAGAAGGGAATTAGCTGTTCTCTTTCATGGCTCCTCAATTGTTCTGATGAAAAGTTTGCAGAAAGGATGACCTATGACACCATTGATATGGAGGAGATGGAAACCGCACCAATGTTCGATATGAATTCTCTTATACAACCCCGGGATGATGAATTGGATTCTGACTATGAAGAGGACAGTGAGGAGGAGATTTAA

mRNA sequence

ATGATTAGAGGCCATGCTGGTGTGGTAAAACCTAATTTTTCCATCATGTTACTCGAGATGCCTACTCTTAAATGTCACAAGTTCAAATTTACTACCACATCAACTTTTCAAACGCATCCTAACCATGAGAAAAGGAGGGGTTTGATTACAAAGCTACAATACTCTCAAGGCGATAGGAGAACAGTATCCAAATCTATGCATTCAACTATTACATCAAAGCCTTACAGTTCTCAGGTGGGTAGAAAAGAGGGAAGTGCTTCATCGTTGTATAGTCGCCCTAGCTTAGTGGAGATGAAGAATGTGAGGTTGGAAAATCGTGCAAAGGTTTATGAGTTCTTGCGTGGAATTGGTGTTGTTCCTGATGAGCTAGATGGATTGGAGCTTCCTGTAACAGTTGATGTTATGAAGGAACGTGTCGATTTTCTTCTCAAATTGGGGCTTACAATTGAAGATATAAACAACTACCCTCTTGTTCTTGGTTGCAGTGTTAAGAAAAATATGATACCAGTACTTGATTACCTTGGTAAATTGGGTGTTAGGAAATCTACTTTCACTGAGTTCTTAAGAAGGTATCCACAAGTCCTCCATTCTAGCGTTGTTGTAGACCTTGCTCCAGTAGTAAAGTATCTTCAAGGCATGGATATTAAGCCAAGTGATGTCCCGCGCGTTCTTGAGAGATATCCGGAAGTATTGGGCTTCAAGCTTGAGGGAACCATGAGCACTTCAGTGGCATACTTGGTAGGAATTGGAGTGGCAAGAAGAGAAATAGGAGGGGTCTTGACCAAATACCCTGAAATTTTGGGAATGAGGGTCGCTCGGGTAATCAAGCCTTTTGTCGATTATCTTGAAAGTTTGGGCATTCCAAGATTAGCAGTGGCTAGGTTAATAGAGAAACGACCACACATTCTAGGGTTTGGATTGGAAAAAAAGGTCAAACCCAATATCCAATTGCTATTGGAGTTTAATGTAAGAGAAGCATACCTTTCTTCTATAGTTGCACAATATGCTGAGATCATAGGAATGGACCTTGAGACTAAGCTTCCAAGTCAAAGGAACTTACTAAAATCAATAATCGAATTGGATAATGATAACTTTGGCACTATAATTGAAAAGATGCCGCAAATTGTTAGCCTTAGCAGTTCAGCTGTGATCAACCATGTGGATTTCTTGAAGAGTTGTGGGTTTTCCTTACTGCAAGTAAAGAACATGGTTGTTGGTTGCCCCCAATTGCTTGCTTTGAATATTGACATAATGAAACACAGCTTTCAATTCTTCCAAAAGGAGATGGGAAGGCCTTTAGACGATTTAGTTGCTTTTCCTGCATTCTTTACTTATGGTCTGGAGTCCACAATAAAGCCCAGACATAGGAAGGTTGTGCAGAAGGGAATTAGCTGTTCTCTTTCATGGCTCCTCAATTGTTCTGATGAAAAGTTTGCAGAAAGGATGACCTATGACACCATTGATATGGAGGAGATGGAAACCGCACCAATGTTCGATATGAATTCTCTTATACAACCCCGGGATGATGAATTGGATTCTGACTATGAAGAGGACAGTGAGGAGGAGATTTAA

Coding sequence (CDS)

ATGATTAGAGGCCATGCTGGTGTGGTAAAACCTAATTTTTCCATCATGTTACTCGAGATGCCTACTCTTAAATGTCACAAGTTCAAATTTACTACCACATCAACTTTTCAAACGCATCCTAACCATGAGAAAAGGAGGGGTTTGATTACAAAGCTACAATACTCTCAAGGCGATAGGAGAACAGTATCCAAATCTATGCATTCAACTATTACATCAAAGCCTTACAGTTCTCAGGTGGGTAGAAAAGAGGGAAGTGCTTCATCGTTGTATAGTCGCCCTAGCTTAGTGGAGATGAAGAATGTGAGGTTGGAAAATCGTGCAAAGGTTTATGAGTTCTTGCGTGGAATTGGTGTTGTTCCTGATGAGCTAGATGGATTGGAGCTTCCTGTAACAGTTGATGTTATGAAGGAACGTGTCGATTTTCTTCTCAAATTGGGGCTTACAATTGAAGATATAAACAACTACCCTCTTGTTCTTGGTTGCAGTGTTAAGAAAAATATGATACCAGTACTTGATTACCTTGGTAAATTGGGTGTTAGGAAATCTACTTTCACTGAGTTCTTAAGAAGGTATCCACAAGTCCTCCATTCTAGCGTTGTTGTAGACCTTGCTCCAGTAGTAAAGTATCTTCAAGGCATGGATATTAAGCCAAGTGATGTCCCGCGCGTTCTTGAGAGATATCCGGAAGTATTGGGCTTCAAGCTTGAGGGAACCATGAGCACTTCAGTGGCATACTTGGTAGGAATTGGAGTGGCAAGAAGAGAAATAGGAGGGGTCTTGACCAAATACCCTGAAATTTTGGGAATGAGGGTCGCTCGGGTAATCAAGCCTTTTGTCGATTATCTTGAAAGTTTGGGCATTCCAAGATTAGCAGTGGCTAGGTTAATAGAGAAACGACCACACATTCTAGGGTTTGGATTGGAAAAAAAGGTCAAACCCAATATCCAATTGCTATTGGAGTTTAATGTAAGAGAAGCATACCTTTCTTCTATAGTTGCACAATATGCTGAGATCATAGGAATGGACCTTGAGACTAAGCTTCCAAGTCAAAGGAACTTACTAAAATCAATAATCGAATTGGATAATGATAACTTTGGCACTATAATTGAAAAGATGCCGCAAATTGTTAGCCTTAGCAGTTCAGCTGTGATCAACCATGTGGATTTCTTGAAGAGTTGTGGGTTTTCCTTACTGCAAGTAAAGAACATGGTTGTTGGTTGCCCCCAATTGCTTGCTTTGAATATTGACATAATGAAACACAGCTTTCAATTCTTCCAAAAGGAGATGGGAAGGCCTTTAGACGATTTAGTTGCTTTTCCTGCATTCTTTACTTATGGTCTGGAGTCCACAATAAAGCCCAGACATAGGAAGGTTGTGCAGAAGGGAATTAGCTGTTCTCTTTCATGGCTCCTCAATTGTTCTGATGAAAAGTTTGCAGAAAGGATGACCTATGACACCATTGATATGGAGGAGATGGAAACCGCACCAATGTTCGATATGAATTCTCTTATACAACCCCGGGATGATGAATTGGATTCTGACTATGAAGAGGACAGTGAGGAGGAGATTTAA

Protein sequence

MIRGHAGVVKPNFSIMLLEMPTLKCHKFKFTTTSTFQTHPNHEKRRGLITKLQYSQGDRRTVSKSMHSTITSKPYSSQVGRKEGSASSLYSRPSLVEMKNVRLENRAKVYEFLRGIGVVPDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTEFLRRYPQVLHSSVVVDLAPVVKYLQGMDIKPSDVPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVDYLESLGIPRLAVARLIEKRPHILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIELDNDNFGTIIEKMPQIVSLSSSAVINHVDFLKSCGFSLLQVKNMVVGCPQLLALNIDIMKHSFQFFQKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCSDEKFAERMTYDTIDMEEMETAPMFDMNSLIQPRDDELDSDYEEDSEEEI

Homology

[Close]

BLAST of Spg003650 vs. NCBI nr
Match: KAG7021053.1 (Transcription termination factor MTERF4, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 975.3 bits (2520), Expect = 2.1e-280
Identity = 493/522 (94.44%), Postives = 511/522 (97.89%), Query Frame = 0


Query: 1   MIRGHAGVVKPNFSIMLLEMPTLKCHKFKFTTTSTFQTHPNHEKRRGLITKLQYSQGDRR 60
           MIRGH GV+KPNFSIMLLEMPTLKCHKFKF TTSTFQT PNHEKRRGLITKLQYS+GDRR
Sbjct: 15  MIRGHTGVLKPNFSIMLLEMPTLKCHKFKFGTTSTFQTSPNHEKRRGLITKLQYSRGDRR 74

Query: 61  TVSKSMHSTITSKPYSSQVGRKEGSASSLYSRPSLVEMKNVRLENRAKVYEFLRGIGVVP 120
           TVSKS+HSTITSKPYSS+VGRKEGSASSLYSRPSLVEMKNVR ENRAKVYEFLRGIG+VP
Sbjct: 75  TVSKSLHSTITSKPYSSKVGRKEGSASSLYSRPSLVEMKNVRQENRAKVYEFLRGIGIVP 134

Query: 121 DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVR 180
           DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNM+PVLDYLGKLGVR
Sbjct: 135 DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGVR 194

Query: 181 KSTFTEFLRRYPQVLHSSVVVDLAPVVKYLQGMDIKPSDVPRVLERYPEVLGFKLEGTMS 240
           KSTFTEFLRRYPQVLHSSVVVDL PVVKYLQGMDIKPSD+PRVLERYPEVLGFKLEGTMS
Sbjct: 195 KSTFTEFLRRYPQVLHSSVVVDLGPVVKYLQGMDIKPSDIPRVLERYPEVLGFKLEGTMS 254

Query: 241 TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVDYLESLGIPRLAVARLIEKRP 300
           TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFV+YLESLGIPRLAVARLIEKRP
Sbjct: 255 TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP 314

Query: 301 HILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIEL 360
           HILGFGLEK+VKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIEL
Sbjct: 315 HILGFGLEKRVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIEL 374

Query: 361 DNDNFGTIIEKMPQIVSLSSSAVINHVDFLKSCGFSLLQVKNMVVGCPQLLALNIDIMKH 420
           DN+NFGTIIEKMPQ+VSLSSSAV +HVDFLKSCGFSL QVKNMV+GCPQLLALN+DIMKH
Sbjct: 375 DNNNFGTIIEKMPQVVSLSSSAVNSHVDFLKSCGFSLQQVKNMVIGCPQLLALNLDIMKH 434

Query: 421 SFQFFQKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCSDEKFAE 480
           SFQFF+KEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKG++CSLSWLLNCSDEKFAE
Sbjct: 435 SFQFFRKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGVTCSLSWLLNCSDEKFAE 494

Query: 481 RMTYDTIDMEEMETAPMFDMNSLIQPRDDELDSDYEEDSEEE 523
           RMTYDTIDMEEMETAP FDM+SL QPR DE DSDYEEDSEEE
Sbjct: 495 RMTYDTIDMEEMETAPTFDMSSLTQPRYDESDSDYEEDSEEE 536

[Close]

BLAST of Spg003650 vs. NCBI nr
Match: XP_023538106.1 (transcription termination factor MTERF4, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023538107.1 transcription termination factor MTERF4, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 974.9 bits (2519), Expect = 2.7e-280
Identity = 494/522 (94.64%), Postives = 509/522 (97.51%), Query Frame = 0


Query: 1   MIRGHAGVVKPNFSIMLLEMPTLKCHKFKFTTTSTFQTHPNHEKRRGLITKLQYSQGDRR 60
           MIRGH GVVKPNFSIMLLEMPTLKC KFKF TTSTFQT PNHEKRRGLITKLQYS+GDRR
Sbjct: 2   MIRGHTGVVKPNFSIMLLEMPTLKCQKFKFITTSTFQTSPNHEKRRGLITKLQYSRGDRR 61

Query: 61  TVSKSMHSTITSKPYSSQVGRKEGSASSLYSRPSLVEMKNVRLENRAKVYEFLRGIGVVP 120
           TVSKS+HSTITSKPYSS+V RKEGSASSLYSRPSLVEMKNVR ENRAKVYEFLRGIG+VP
Sbjct: 62  TVSKSLHSTITSKPYSSKVSRKEGSASSLYSRPSLVEMKNVRQENRAKVYEFLRGIGIVP 121

Query: 121 DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVR 180
           DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNM+PVLDYLGKLGVR
Sbjct: 122 DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGVR 181

Query: 181 KSTFTEFLRRYPQVLHSSVVVDLAPVVKYLQGMDIKPSDVPRVLERYPEVLGFKLEGTMS 240
           KSTFTEFLRRYPQVLHSSVVVDL PVVKYLQGMDIKPSD+PRVLERYPEVLGFKLEGTMS
Sbjct: 182 KSTFTEFLRRYPQVLHSSVVVDLGPVVKYLQGMDIKPSDIPRVLERYPEVLGFKLEGTMS 241

Query: 241 TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVDYLESLGIPRLAVARLIEKRP 300
           TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFV+YLESLGIPRLAVARLIEKRP
Sbjct: 242 TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP 301

Query: 301 HILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIEL 360
           HILGFGLEK+VKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIEL
Sbjct: 302 HILGFGLEKRVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIEL 361

Query: 361 DNDNFGTIIEKMPQIVSLSSSAVINHVDFLKSCGFSLLQVKNMVVGCPQLLALNIDIMKH 420
           DNDNFGTIIEKMPQ+VSLSSSAV +HVDFLKSCGFSL QVKNMV+GCPQLLALN+DIMKH
Sbjct: 362 DNDNFGTIIEKMPQVVSLSSSAVNSHVDFLKSCGFSLQQVKNMVIGCPQLLALNLDIMKH 421

Query: 421 SFQFFQKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCSDEKFAE 480
           SFQFFQKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKG++CSLSWLLNCSDEKFAE
Sbjct: 422 SFQFFQKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGVTCSLSWLLNCSDEKFAE 481

Query: 481 RMTYDTIDMEEMETAPMFDMNSLIQPRDDELDSDYEEDSEEE 523
           RMTYDTIDMEEMETAP FDM+SL QPR DE DSDYEEDSEEE
Sbjct: 482 RMTYDTIDMEEMETAPTFDMSSLTQPRYDESDSDYEEDSEEE 523

[Close]

BLAST of Spg003650 vs. NCBI nr
Match: KAG6586221.1 (Transcription termination factor MTERF4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 974.5 bits (2518), Expect = 3.5e-280
Identity = 493/522 (94.44%), Postives = 511/522 (97.89%), Query Frame = 0


Query: 1   MIRGHAGVVKPNFSIMLLEMPTLKCHKFKFTTTSTFQTHPNHEKRRGLITKLQYSQGDRR 60
           MIRGH GV+KPNFSIMLLEMPTLKCHKFKF TTSTFQT PNHEKRRGLITKLQYS+GDRR
Sbjct: 2   MIRGHTGVLKPNFSIMLLEMPTLKCHKFKFGTTSTFQTSPNHEKRRGLITKLQYSRGDRR 61

Query: 61  TVSKSMHSTITSKPYSSQVGRKEGSASSLYSRPSLVEMKNVRLENRAKVYEFLRGIGVVP 120
           TVSKS+HSTITSKPYSS+VGRKEGSASSLYSRPSLVEMKNVR ENRAKVYEFLRGIG+VP
Sbjct: 62  TVSKSLHSTITSKPYSSKVGRKEGSASSLYSRPSLVEMKNVRQENRAKVYEFLRGIGIVP 121

Query: 121 DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVR 180
           DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNM+PVLDYLGKLGVR
Sbjct: 122 DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGVR 181

Query: 181 KSTFTEFLRRYPQVLHSSVVVDLAPVVKYLQGMDIKPSDVPRVLERYPEVLGFKLEGTMS 240
           KSTFTEFLRRYPQVLHSSVVVDL PVVKYLQGMDIKPSD+PRVLERYPEVLGFKLEGTMS
Sbjct: 182 KSTFTEFLRRYPQVLHSSVVVDLGPVVKYLQGMDIKPSDIPRVLERYPEVLGFKLEGTMS 241

Query: 241 TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVDYLESLGIPRLAVARLIEKRP 300
           TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFV+YLESLGIPRLAVARLIEKRP
Sbjct: 242 TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP 301

Query: 301 HILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIEL 360
           HILGFGLEK+VKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIEL
Sbjct: 302 HILGFGLEKRVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIEL 361

Query: 361 DNDNFGTIIEKMPQIVSLSSSAVINHVDFLKSCGFSLLQVKNMVVGCPQLLALNIDIMKH 420
           DN+NFGTIIEKMPQ+VSLSSSAV +HVDFLKSCGFSL QVKNMV+GCPQLLALN+DIMKH
Sbjct: 362 DNNNFGTIIEKMPQVVSLSSSAVNSHVDFLKSCGFSLQQVKNMVIGCPQLLALNLDIMKH 421

Query: 421 SFQFFQKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCSDEKFAE 480
           SFQFF+KEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKG++CSLSWLLNCSDEKFAE
Sbjct: 422 SFQFFRKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGMTCSLSWLLNCSDEKFAE 481

Query: 481 RMTYDTIDMEEMETAPMFDMNSLIQPRDDELDSDYEEDSEEE 523
           RMTYDTIDMEEMETAP FDM+SL QPR DE DSDYEEDSEEE
Sbjct: 482 RMTYDTIDMEEMETAPTFDMSSLTQPRYDESDSDYEEDSEEE 523

[Close]

BLAST of Spg003650 vs. NCBI nr
Match: XP_022938209.1 (transcription termination factor MTERF4, chloroplastic [Cucurbita moschata] >XP_022938210.1 transcription termination factor MTERF4, chloroplastic [Cucurbita moschata] >XP_022938211.1 transcription termination factor MTERF4, chloroplastic [Cucurbita moschata])

HSP 1 Score: 974.2 bits (2517), Expect = 4.6e-280
Identity = 494/522 (94.64%), Postives = 509/522 (97.51%), Query Frame = 0


Query: 1   MIRGHAGVVKPNFSIMLLEMPTLKCHKFKFTTTSTFQTHPNHEKRRGLITKLQYSQGDRR 60
           MIRGH GVVKPNFSIMLLEMPTLKCHKFKF TTSTFQT PNHEKRRGLITKLQYS+GD R
Sbjct: 2   MIRGHTGVVKPNFSIMLLEMPTLKCHKFKFDTTSTFQTSPNHEKRRGLITKLQYSRGDWR 61

Query: 61  TVSKSMHSTITSKPYSSQVGRKEGSASSLYSRPSLVEMKNVRLENRAKVYEFLRGIGVVP 120
           TVSKS+HSTITSKPYSS+VGRKEGSASSLYSRPSLVEMKNVR ENRAKVYEFLRGIG+VP
Sbjct: 62  TVSKSLHSTITSKPYSSKVGRKEGSASSLYSRPSLVEMKNVRQENRAKVYEFLRGIGIVP 121

Query: 121 DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVR 180
           DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNM+PVLDYLGKLGVR
Sbjct: 122 DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGVR 181

Query: 181 KSTFTEFLRRYPQVLHSSVVVDLAPVVKYLQGMDIKPSDVPRVLERYPEVLGFKLEGTMS 240
           KSTFTEFLRRYPQVLHSSVVVDL PVVKYLQGMDIKPSD+PRVLERYPEVLGFKLEGTMS
Sbjct: 182 KSTFTEFLRRYPQVLHSSVVVDLGPVVKYLQGMDIKPSDIPRVLERYPEVLGFKLEGTMS 241

Query: 241 TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVDYLESLGIPRLAVARLIEKRP 300
           TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFV+YLESLGIPRLAVARLIEKRP
Sbjct: 242 TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP 301

Query: 301 HILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIEL 360
           HILGFGLEK+VKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIEL
Sbjct: 302 HILGFGLEKRVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIEL 361

Query: 361 DNDNFGTIIEKMPQIVSLSSSAVINHVDFLKSCGFSLLQVKNMVVGCPQLLALNIDIMKH 420
           DNDNFGTIIEKMPQ+VSLSSSAV +HVD LKSCGFSL QVKNMV+GCPQLLALN+DIMKH
Sbjct: 362 DNDNFGTIIEKMPQVVSLSSSAVNSHVDCLKSCGFSLQQVKNMVIGCPQLLALNLDIMKH 421

Query: 421 SFQFFQKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCSDEKFAE 480
           SFQFFQKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKG++CSLSWLLNCSDEKFAE
Sbjct: 422 SFQFFQKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGVTCSLSWLLNCSDEKFAE 481

Query: 481 RMTYDTIDMEEMETAPMFDMNSLIQPRDDELDSDYEEDSEEE 523
           RMTYDTIDMEEMETAP FDM+SL QPR DE DSDYEEDSEEE
Sbjct: 482 RMTYDTIDMEEMETAPTFDMSSLTQPRYDESDSDYEEDSEEE 523

[Close]

BLAST of Spg003650 vs. NCBI nr
Match: XP_022965673.1 (transcription termination factor MTERF4, chloroplastic [Cucurbita maxima] >XP_022965674.1 transcription termination factor MTERF4, chloroplastic [Cucurbita maxima] >XP_022965675.1 transcription termination factor MTERF4, chloroplastic [Cucurbita maxima])

HSP 1 Score: 965.7 bits (2495), Expect = 1.6e-277
Identity = 490/522 (93.87%), Postives = 504/522 (96.55%), Query Frame = 0


Query: 1   MIRGHAGVVKPNFSIMLLEMPTLKCHKFKFTTTSTFQTHPNHEKRRGLITKLQYSQGDRR 60
           MIRGH GVVKPNFSIMLLEMPTLKCHKFKF TTSTFQ  PNHEKR  LITKLQYS+GDR+
Sbjct: 2   MIRGHTGVVKPNFSIMLLEMPTLKCHKFKFGTTSTFQASPNHEKRGSLITKLQYSRGDRK 61

Query: 61  TVSKSMHSTITSKPYSSQVGRKEGSASSLYSRPSLVEMKNVRLENRAKVYEFLRGIGVVP 120
           TVSKS+HSTITSKPYSS+V RKEGSASSLYSRPSLVEMKNVR ENRAKVYEFLRGIG+VP
Sbjct: 62  TVSKSLHSTITSKPYSSKVSRKEGSASSLYSRPSLVEMKNVRQENRAKVYEFLRGIGIVP 121

Query: 121 DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVR 180
           DELDGLELPVTVDVMKERVDFLLKLGL IEDINNYPLVLGCSVKKNM+PVLDYLGKLGVR
Sbjct: 122 DELDGLELPVTVDVMKERVDFLLKLGLAIEDINNYPLVLGCSVKKNMVPVLDYLGKLGVR 181

Query: 181 KSTFTEFLRRYPQVLHSSVVVDLAPVVKYLQGMDIKPSDVPRVLERYPEVLGFKLEGTMS 240
           KSTFTEFLRRYPQVLHSSVVVDL PVVKYLQGMDIKPSD+PRVLERYPEVLGFKLEGTMS
Sbjct: 182 KSTFTEFLRRYPQVLHSSVVVDLGPVVKYLQGMDIKPSDIPRVLERYPEVLGFKLEGTMS 241

Query: 241 TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVDYLESLGIPRLAVARLIEKRP 300
           TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFV+YLESLGIPRLAVARLIEKRP
Sbjct: 242 TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP 301

Query: 301 HILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIEL 360
           HILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIEL
Sbjct: 302 HILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIEL 361

Query: 361 DNDNFGTIIEKMPQIVSLSSSAVINHVDFLKSCGFSLLQVKNMVVGCPQLLALNIDIMKH 420
           DNDNFGTIIEKMPQ+VSLSSSAV +HVDFLKSCGFSL QVKNMV+GCPQLLALN+DIMKH
Sbjct: 362 DNDNFGTIIEKMPQVVSLSSSAVNSHVDFLKSCGFSLQQVKNMVIGCPQLLALNLDIMKH 421

Query: 421 SFQFFQKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCSDEKFAE 480
           SFQFFQKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVV KGI+CSLSWLLNCSDEKFAE
Sbjct: 422 SFQFFQKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVHKGITCSLSWLLNCSDEKFAE 481

Query: 481 RMTYDTIDMEEMETAPMFDMNSLIQPRDDELDSDYEEDSEEE 523
           RMTYDTIDMEEMETAP FDM+SL QPR DE DSDYEED EEE
Sbjct: 482 RMTYDTIDMEEMETAPSFDMSSLTQPRYDESDSDYEEDGEEE 523

[Close]

BLAST of Spg003650 vs. ExPASy Swiss-Prot
Match: Q9ZT96 (Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF4 PE=1 SV=1)

HSP 1 Score: 692.6 bits (1786), Expect = 3.5e-198
Identity = 360/534 (67.42%), Postives = 431/534 (80.71%), Query Frame = 0


Query: 2   IRGHAGVVKPNFSIMLLEMPTLKCHKFKFTTTSTFQTHPNHEKR--RGLITKLQYSQGDR 61
           IR   G  KP F ++  E P+    + +  + ST+    NH+KR   G+   +Q +  +R
Sbjct: 3   IRFCNGFTKPGFLLVHFEPPSFFAVRSRSLSDSTYGNLCNHKKRPGTGIGLTVQCAIANR 62

Query: 62  RTVSKSMHS--TITSKPYSSQVGR-------KEGSASSLYSRPSLVEMKNVRLENRAKVY 121
           R  S+S+ S     S   SS  GR       K   + SLYSRPSL++M   +  NRAKVY
Sbjct: 63  RFSSRSLDSPRRERSSRSSSSSGRDRDRDKDKGRDSKSLYSRPSLLDMNKEKAANRAKVY 122

Query: 122 EFLRGIGVVPDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPV 181
           EFLRGIG+VPDELDGLELPVT DVMKERV+FL KLGLTIEDINNYPLVLGCSVKKNM+PV
Sbjct: 123 EFLRGIGIVPDELDGLELPVTADVMKERVEFLHKLGLTIEDINNYPLVLGCSVKKNMVPV 182

Query: 182 LDYLGKLGVRKSTFTEFLRRYPQVLHSSVVVDLAPVVKYLQGMDIKPSDVPRVLERYPEV 241
           LDYLGKLGVRKSTFTEFLRRYPQVLHSSVV+DLAPVVKYLQG+DIKPSDVPRVLERYPEV
Sbjct: 183 LDYLGKLGVRKSTFTEFLRRYPQVLHSSVVIDLAPVVKYLQGLDIKPSDVPRVLERYPEV 242

Query: 242 LGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVDYLESLGIPRL 301
           LGFKLEGTMSTSVAYLVGIGVARREIGG+LT+YPEILGMRVAR+IKP V+YLE LGIPRL
Sbjct: 243 LGFKLEGTMSTSVAYLVGIGVARREIGGILTRYPEILGMRVARIIKPLVEYLEVLGIPRL 302

Query: 302 AVARLIEKRPHILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQ 361
           A ARLIEKRPHILGF L+  VKPN+Q+L +FNVRE  L SI+AQY EIIG+DL+ KL +Q
Sbjct: 303 AAARLIEKRPHILGFELDDTVKPNVQILQDFNVRETSLPSIIAQYPEIIGIDLKPKLDTQ 362

Query: 362 RNLLKSIIELDNDNFGTIIEKMPQIVSLSSSAVINHVDFLKSCGFSLLQVKNMVVGCPQL 421
           R LL S I L+ ++ G++IE+MPQ VSLS S ++ H+DFL  CGFS+ Q + MV+GCPQ+
Sbjct: 363 RKLLCSAIHLNPEDLGSLIERMPQFVSLSESPMLKHIDFLTKCGFSIDQTREMVIGCPQV 422

Query: 422 LALNIDIMKHSFQFFQKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGISCSLSWL 481
           LALN+ IMK SF++FQKEM RPL DLV FPAFFTYGLEST+KPRH+K+++KGI CSL+W+
Sbjct: 423 LALNLGIMKLSFEYFQKEMKRPLQDLVDFPAFFTYGLESTVKPRHKKIIKKGIKCSLAWM 482

Query: 482 LNCSDEKFAERMTYDTIDMEEMETAP-MFDMNSLIQP-RDDELDSDYEEDSEEE 523
           LNCSDEKF +RM+YDTID+EE+ET P  FDMN+L+QP R++E DS+YEE+ +++
Sbjct: 483 LNCSDEKFEQRMSYDTIDIEEVETDPSSFDMNTLMQPEREEESDSEYEEEEDDD 536

[Close]

BLAST of Spg003650 vs. ExPASy Swiss-Prot
Match: Q6AUK6 (Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0404000 PE=2 SV=1)

HSP 1 Score: 575.1 bits (1481), Expect = 8.1e-163
Identity = 282/436 (64.68%), Postives = 356/436 (81.65%), Query Frame = 0


Query: 86  ASSLYSRPSLVEMKNVRLENRAKVYEFLRGIGVVPDELDGLELPVTVDVMKERVDFLLKL 145
           +SSLY+RPSL++M+  R   RA V  FL  +GV P EL GLELP TVDVM+ERV+FL  L
Sbjct: 63  SSSLYARPSLLDMERGRAARRADVDAFLASLGVDPGELAGLELPATVDVMRERVEFLHSL 122

Query: 146 GLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTEFLRRYPQVLHSSVVVDLAP 205
            L+ ED+  YPL LGCSV+KNM+PVLDYLGKLGVR+    + LRRYPQVLH+SVVVDLAP
Sbjct: 123 DLSNEDLAAYPLALGCSVRKNMVPVLDYLGKLGVRQDALPDLLRRYPQVLHASVVVDLAP 182

Query: 206 VVKYLQGMDIKPSDVPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPE 265
           VVKYLQGMD++P DVPRVLERYPE+LGFKLEGTMSTS+AYLVGIGVARR++G V+T++PE
Sbjct: 183 VVKYLQGMDVRPHDVPRVLERYPELLGFKLEGTMSTSIAYLVGIGVARRQVGSVITRFPE 242

Query: 266 ILGMRVARVIKPFVDYLESLGIPRLAVARLIEKRPHILGFGLEKKVKPNIQLLLEFNVRE 325
           +LGMRV ++IKPFV++LE +G+ RLA+AR+IEK+P++LGFGLE KVKPNI+ LLEF VR+
Sbjct: 243 VLGMRVGKIIKPFVEHLEGIGLQRLAIARIIEKKPYVLGFGLEDKVKPNIEALLEFGVRK 302

Query: 326 AYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIELDNDNFGTIIEKMPQIVSLSSSAVIN 385
             L+ IVAQY +I+G++L  KL +Q++L +S I + +++FG +IE+MPQ +SL  +AV+ 
Sbjct: 303 EALAFIVAQYPDILGIELRDKLATQQSLFESSILVSSEDFGRVIERMPQAISLGRTAVLK 362

Query: 386 HVDFLKSCGFSLLQVKNMVVGCPQLLALNIDIMKHSFQFFQKEMGRPLDDLVAFPAFFTY 445
           HV+FL SCGF L QV  MVV CPQLLALN+DIMK SF++FQ EM R L++LV FPAFFTY
Sbjct: 363 HVNFLTSCGFLLSQVSKMVVACPQLLALNMDIMKMSFEYFQNEMERDLEELVEFPAFFTY 422

Query: 446 GLESTIKPRHRKVVQKGISCSLSWLLNCSDEKFAERMTYDTIDMEEMETAPMFDMNSLIQ 505
           GLEST++PRH  V +KG +CSL+WLLNCSD KF ERM YDTI +EEME    FD N+L +
Sbjct: 423 GLESTVRPRHEMVAKKGFTCSLAWLLNCSDAKFDERMKYDTIGIEEMEVDNSFDTNTLSE 482

Query: 506 PRDDEL-DSDYEEDSE 521
             +DE+ D D +EDS+
Sbjct: 483 RVEDEVEDEDLDEDSD 498

[Close]

BLAST of Spg003650 vs. ExPASy Swiss-Prot
Match: B6TGN4 (Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MTERF4 PE=2 SV=1)

HSP 1 Score: 564.3 bits (1453), Expect = 1.4e-159
Identity = 272/435 (62.53%), Postives = 355/435 (81.61%), Query Frame = 0


Query: 86  ASSLYSRPSLVEMKNVRLENRAKVYEFLRGIGVVPDELDGLELPVTVDVMKERVDFLLKL 145
           +SSLY+RPSL++M+  R   RA V  FL  +GV P EL GLELPVTVDVM+ER +FL  L
Sbjct: 54  SSSLYARPSLLDMERDRATRRADVDAFLTSLGVDPGELAGLELPVTVDVMRERAEFLGSL 113

Query: 146 GLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTEFLRRYPQVLHSSVVVDLAP 205
           GLT ED+  YPL LGCSV+KNM+PVLDYLGKLGVR+    + LRRYPQVLH+SVVVDLAP
Sbjct: 114 GLTQEDLAAYPLALGCSVRKNMVPVLDYLGKLGVRRDALPDLLRRYPQVLHASVVVDLAP 173

Query: 206 VVKYLQGMDIKPSDVPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPE 265
           VVKYLQGMD++P+DVPRVLERYPE+LGFKLEGTMSTSVAYLVGIGV RR++G V+T++PE
Sbjct: 174 VVKYLQGMDVRPTDVPRVLERYPELLGFKLEGTMSTSVAYLVGIGVGRRQVGSVITRFPE 233

Query: 266 ILGMRVARVIKPFVDYLESLGIPRLAVARLIEKRPHILGFGLEKKVKPNIQLLLEFNVRE 325
           +LGMRV ++IKPFV++LE +G+ RLA+AR+IEK+P++LGFGL++KVKPNI+ L++  VR+
Sbjct: 234 VLGMRVGKIIKPFVEHLEGIGLQRLAIARIIEKKPYVLGFGLQEKVKPNIEALVDIGVRK 293

Query: 326 AYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIELDNDNFGTIIEKMPQIVSLSSSAVIN 385
             L+SIV QY +++G++L  KL +Q++L +S I +  ++FG ++E+MPQ +SL  +AV+ 
Sbjct: 294 EALASIVMQYPDVLGLELRDKLVAQQSLFESSILVSREDFGRVLERMPQAISLGRAAVLK 353

Query: 386 HVDFLKSCGFSLLQVKNMVVGCPQLLALNIDIMKHSFQFFQKEMGRPLDDLVAFPAFFTY 445
           HV+FL +CGF L QV  MVV CPQLLALNIDIM+ +F++F+ EM R L++LV FPAFFTY
Sbjct: 354 HVNFLTACGFMLSQVSKMVVACPQLLALNIDIMRMNFEYFKNEMERDLEELVEFPAFFTY 413

Query: 446 GLESTIKPRHRKVVQKGISCSLSWLLNCSDEKFAERMTYDTIDMEEMETAPMFDMNSLIQ 505
           G+EST++PRH  V +KG++CSL+WLLNCSD KF ERM YDTI +EEME     DMN+ + 
Sbjct: 414 GIESTVRPRHEMVSRKGLTCSLAWLLNCSDAKFDERMKYDTIGVEEMEREDSSDMNASV- 473

Query: 506 PRDDELDSDYEEDSE 521
              DE++S+  EDS+
Sbjct: 474 ---DEVESEEYEDSD 484

[Close]

BLAST of Spg003650 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 8.4e-35
Identity = 93/363 (25.62%), Postives = 181/363 (49.86%), Query Frame = 0


Query: 164 KKNMIPVLDYLGKLGVRKSTFTEFLRRYPQVLHSSVVVDLAPVVKYLQGMDIKPSDVPRV 223
           ++ +  +++YL   GVR+      + R P++L  S + ++   V +   M +  +D   +
Sbjct: 278 REELNEIVEYLESNGVRRDWMGYVVGRCPELLSFS-MEEVKSRVDFFLKMGMNQNDFGTM 337

Query: 224 LERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVDYLE 283
           +  YP+++GF     M   + YL   G++  E+G +L   P ++G  +    KP V Y  
Sbjct: 338 VYDYPKIIGFFSFQVMEKKINYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFY 397

Query: 284 SLGIPRLAVARLIEKRPHILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDL 343
            LGIP+  + R++  +P +    LEK + P ++ L E  +    + +++ ++  ++   L
Sbjct: 398 YLGIPKEGMKRILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNSL 457

Query: 344 ETKLPSQRNLLKSIIELDNDNFGTIIEKMPQIVSLSSSAVIN-HVDFLKSCGFSLLQVKN 403
             K+      L +   +   + G +I   P ++  S    +  ++ +  S G    Q+  
Sbjct: 458 YKKIRPVVIFLLTRAGVTQKDIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGE 517

Query: 404 MVVGCPQLLALNIDIMKHSFQFFQKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKG 463
           M+   P LL  N+D ++  +++ ++ M RPL DL+ FP FF+Y LE  I PRH  +V+  
Sbjct: 518 MIADFPMLLRYNVDNLRPKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVENR 577

Query: 464 ISCSLSWLLNCSDEKFAERMTYDTIDMEEMETAPMFDMNSLIQPRDDELDSD---YEEDS 523
           ++  L ++L C+DE+F ER   D ++  E   A +   +S  QP D+ +      + +++
Sbjct: 578 VNFKLRYMLACTDEEF-ERRVRDKVERRERFEAGLDSEDS--QPSDENISDQEIAFSDEA 636

[Close]

BLAST of Spg003650 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 8.7e-32
Identity = 68/276 (24.64%), Postives = 147/276 (53.26%), Query Frame = 0


Query: 215 IKPSDVPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPEILGMRVARV 274
           I+   +P ++ R P++L  +L+  +   V  L  +G   RE+   +TK+P IL   V   
Sbjct: 54  IQERKLPYIVSRCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEK 113

Query: 275 IKPFVDYLESLGIPRLAVARLIEKRPHILGFGLEKKVKPNIQLLLEFNV-REAYLSSIVA 334
           + P + + ++LG+P   + ++I   P ++ + ++ K+   +  L    + ++  +  ++ 
Sbjct: 114 LCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLV 173

Query: 335 QYAEIIGMDLETKLPSQRNLLKSIIELDNDNFGTIIEKMPQIVSLSSSAVIN-HVDFLKS 394
           +   ++G  ++ +L      LKS + L  D   +++   PQ++    + ++  + D+LK 
Sbjct: 174 KNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKE 233

Query: 395 CGFSLLQVKNMVVGCPQLLALNI-DIMKHSFQFFQKEMGRPLDDLVAFPAFFTYGLESTI 454
           CGF   Q+  MV G PQ+L  ++ + ++   +F  + MGR +D++ ++P FF +GL+  +
Sbjct: 234 CGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKV 293

Query: 455 KPRHRKVVQKGISCSLSWLLNCSDEKFAERMTYDTI 488
           + R + V +  I CSL  +L+C+ +KF E+  +  +
Sbjct: 294 ESRFKLVKKNNIDCSLREMLDCNTKKFHEKFGFSEV 329

[Close]

BLAST of Spg003650 vs. ExPASy TrEMBL
Match: A0A6J1FDE7 (transcription termination factor MTERF4, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111444359 PE=3 SV=1)

HSP 1 Score: 974.2 bits (2517), Expect = 2.2e-280
Identity = 494/522 (94.64%), Postives = 509/522 (97.51%), Query Frame = 0


Query: 1   MIRGHAGVVKPNFSIMLLEMPTLKCHKFKFTTTSTFQTHPNHEKRRGLITKLQYSQGDRR 60
           MIRGH GVVKPNFSIMLLEMPTLKCHKFKF TTSTFQT PNHEKRRGLITKLQYS+GD R
Sbjct: 2   MIRGHTGVVKPNFSIMLLEMPTLKCHKFKFDTTSTFQTSPNHEKRRGLITKLQYSRGDWR 61

Query: 61  TVSKSMHSTITSKPYSSQVGRKEGSASSLYSRPSLVEMKNVRLENRAKVYEFLRGIGVVP 120
           TVSKS+HSTITSKPYSS+VGRKEGSASSLYSRPSLVEMKNVR ENRAKVYEFLRGIG+VP
Sbjct: 62  TVSKSLHSTITSKPYSSKVGRKEGSASSLYSRPSLVEMKNVRQENRAKVYEFLRGIGIVP 121

Query: 121 DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVR 180
           DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNM+PVLDYLGKLGVR
Sbjct: 122 DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGVR 181

Query: 181 KSTFTEFLRRYPQVLHSSVVVDLAPVVKYLQGMDIKPSDVPRVLERYPEVLGFKLEGTMS 240
           KSTFTEFLRRYPQVLHSSVVVDL PVVKYLQGMDIKPSD+PRVLERYPEVLGFKLEGTMS
Sbjct: 182 KSTFTEFLRRYPQVLHSSVVVDLGPVVKYLQGMDIKPSDIPRVLERYPEVLGFKLEGTMS 241

Query: 241 TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVDYLESLGIPRLAVARLIEKRP 300
           TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFV+YLESLGIPRLAVARLIEKRP
Sbjct: 242 TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP 301

Query: 301 HILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIEL 360
           HILGFGLEK+VKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIEL
Sbjct: 302 HILGFGLEKRVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIEL 361

Query: 361 DNDNFGTIIEKMPQIVSLSSSAVINHVDFLKSCGFSLLQVKNMVVGCPQLLALNIDIMKH 420
           DNDNFGTIIEKMPQ+VSLSSSAV +HVD LKSCGFSL QVKNMV+GCPQLLALN+DIMKH
Sbjct: 362 DNDNFGTIIEKMPQVVSLSSSAVNSHVDCLKSCGFSLQQVKNMVIGCPQLLALNLDIMKH 421

Query: 421 SFQFFQKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCSDEKFAE 480
           SFQFFQKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKG++CSLSWLLNCSDEKFAE
Sbjct: 422 SFQFFQKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGVTCSLSWLLNCSDEKFAE 481

Query: 481 RMTYDTIDMEEMETAPMFDMNSLIQPRDDELDSDYEEDSEEE 523
           RMTYDTIDMEEMETAP FDM+SL QPR DE DSDYEEDSEEE
Sbjct: 482 RMTYDTIDMEEMETAPTFDMSSLTQPRYDESDSDYEEDSEEE 523

[Close]

BLAST of Spg003650 vs. ExPASy TrEMBL
Match: A0A6J1HPD6 (transcription termination factor MTERF4, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111465502 PE=3 SV=1)

HSP 1 Score: 965.7 bits (2495), Expect = 7.9e-278
Identity = 490/522 (93.87%), Postives = 504/522 (96.55%), Query Frame = 0


Query: 1   MIRGHAGVVKPNFSIMLLEMPTLKCHKFKFTTTSTFQTHPNHEKRRGLITKLQYSQGDRR 60
           MIRGH GVVKPNFSIMLLEMPTLKCHKFKF TTSTFQ  PNHEKR  LITKLQYS+GDR+
Sbjct: 2   MIRGHTGVVKPNFSIMLLEMPTLKCHKFKFGTTSTFQASPNHEKRGSLITKLQYSRGDRK 61

Query: 61  TVSKSMHSTITSKPYSSQVGRKEGSASSLYSRPSLVEMKNVRLENRAKVYEFLRGIGVVP 120
           TVSKS+HSTITSKPYSS+V RKEGSASSLYSRPSLVEMKNVR ENRAKVYEFLRGIG+VP
Sbjct: 62  TVSKSLHSTITSKPYSSKVSRKEGSASSLYSRPSLVEMKNVRQENRAKVYEFLRGIGIVP 121

Query: 121 DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVR 180
           DELDGLELPVTVDVMKERVDFLLKLGL IEDINNYPLVLGCSVKKNM+PVLDYLGKLGVR
Sbjct: 122 DELDGLELPVTVDVMKERVDFLLKLGLAIEDINNYPLVLGCSVKKNMVPVLDYLGKLGVR 181

Query: 181 KSTFTEFLRRYPQVLHSSVVVDLAPVVKYLQGMDIKPSDVPRVLERYPEVLGFKLEGTMS 240
           KSTFTEFLRRYPQVLHSSVVVDL PVVKYLQGMDIKPSD+PRVLERYPEVLGFKLEGTMS
Sbjct: 182 KSTFTEFLRRYPQVLHSSVVVDLGPVVKYLQGMDIKPSDIPRVLERYPEVLGFKLEGTMS 241

Query: 241 TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVDYLESLGIPRLAVARLIEKRP 300
           TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFV+YLESLGIPRLAVARLIEKRP
Sbjct: 242 TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP 301

Query: 301 HILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIEL 360
           HILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIEL
Sbjct: 302 HILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIEL 361

Query: 361 DNDNFGTIIEKMPQIVSLSSSAVINHVDFLKSCGFSLLQVKNMVVGCPQLLALNIDIMKH 420
           DNDNFGTIIEKMPQ+VSLSSSAV +HVDFLKSCGFSL QVKNMV+GCPQLLALN+DIMKH
Sbjct: 362 DNDNFGTIIEKMPQVVSLSSSAVNSHVDFLKSCGFSLQQVKNMVIGCPQLLALNLDIMKH 421

Query: 421 SFQFFQKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCSDEKFAE 480
           SFQFFQKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVV KGI+CSLSWLLNCSDEKFAE
Sbjct: 422 SFQFFQKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVHKGITCSLSWLLNCSDEKFAE 481

Query: 481 RMTYDTIDMEEMETAPMFDMNSLIQPRDDELDSDYEEDSEEE 523
           RMTYDTIDMEEMETAP FDM+SL QPR DE DSDYEED EEE
Sbjct: 482 RMTYDTIDMEEMETAPSFDMSSLTQPRYDESDSDYEEDGEEE 523

[Close]

BLAST of Spg003650 vs. ExPASy TrEMBL
Match: A0A6J1DUY1 (transcription termination factor MTERF4, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111023323 PE=3 SV=1)

HSP 1 Score: 938.3 bits (2424), Expect = 1.3e-269
Identity = 477/522 (91.38%), Postives = 502/522 (96.17%), Query Frame = 0


Query: 1   MIRGHAGVVKPNFSIMLLEMPTLKCHKFKFTTTSTFQTHPNHEKRRGLITKLQYSQGDRR 60
           MIR HAGVVKPNFSI++ +MPTLKC KF FTTTS FQT  N ++RRGLIT+LQYS GDRR
Sbjct: 2   MIRRHAGVVKPNFSIIVPKMPTLKCCKFTFTTTSIFQTPSNRDRRRGLITRLQYSDGDRR 61

Query: 61  TVSKSMHSTITSKPYSSQVGRKEGSASSLYSRPSLVEMKNVRLENRAKVYEFLRGIGVVP 120
           TVSKS+HSTITSKP S++VGRKEGSASSLYS PSLVEMKNVRLENRAKVYEFL GIG+VP
Sbjct: 62  TVSKSLHSTITSKPSSTRVGRKEGSASSLYSHPSLVEMKNVRLENRAKVYEFLCGIGIVP 121

Query: 121 DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVR 180
           DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVR
Sbjct: 122 DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVR 181

Query: 181 KSTFTEFLRRYPQVLHSSVVVDLAPVVKYLQGMDIKPSDVPRVLERYPEVLGFKLEGTMS 240
           KSTFTEFLRRYPQVLH+SVVVDLAPVVKYLQGMDIKP+D+P VLERYPEVLGFKLEGTMS
Sbjct: 182 KSTFTEFLRRYPQVLHASVVVDLAPVVKYLQGMDIKPNDIPHVLERYPEVLGFKLEGTMS 241

Query: 241 TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVDYLESLGIPRLAVARLIEKRP 300
           TSVAYLVGIGVAR+EIGGVLTKYP+ILGMRVARVIKPFV+YLESLGIPRLAVARLIEKRP
Sbjct: 242 TSVAYLVGIGVARKEIGGVLTKYPDILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP 301

Query: 301 HILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIEL 360
           HILGFGLEKKVKPNIQ+LL+FNVRE YLSSIVAQYAEIIGMDLETKL SQRNLLKSIIEL
Sbjct: 302 HILGFGLEKKVKPNIQMLLKFNVREEYLSSIVAQYAEIIGMDLETKLLSQRNLLKSIIEL 361

Query: 361 DNDNFGTIIEKMPQIVSLSSSAVINHVDFLKSCGFSLLQVKNMVVGCPQLLALNIDIMKH 420
           D+DNFGTII KMPQIVSLSSSAVINHVDFLKSCGFSL+QVKNMV+GCPQLLALN+DIMKH
Sbjct: 362 DDDNFGTIIGKMPQIVSLSSSAVINHVDFLKSCGFSLVQVKNMVIGCPQLLALNLDIMKH 421

Query: 421 SFQFFQKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCSDEKFAE 480
           SFQFFQ EMGRPLDDLV FPAFFTYGLESTIKPRHRKVVQKGI+CSLSWLLNCSDEKFAE
Sbjct: 422 SFQFFQMEMGRPLDDLVTFPAFFTYGLESTIKPRHRKVVQKGITCSLSWLLNCSDEKFAE 481

Query: 481 RMTYDTIDMEEMETAPMFDMNSLIQPRDDELDSDYEEDSEEE 523
           RMTYDTIDMEEMETAP FDMNSLIQPR+D+ DSDYEEDSEEE
Sbjct: 482 RMTYDTIDMEEMETAPTFDMNSLIQPRNDDSDSDYEEDSEEE 523

[Close]

BLAST of Spg003650 vs. ExPASy TrEMBL
Match: A0A0A0KRV7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G466880 PE=3 SV=1)

HSP 1 Score: 924.1 bits (2387), Expect = 2.6e-265
Identity = 467/523 (89.29%), Postives = 493/523 (94.26%), Query Frame = 0


Query: 1   MIRGHAGVVKPNFSIMLLEMPTLKCHKFKFTTTSTFQTHPNHEKRRGLITKLQYSQGDRR 60
           MIRGHAGV KPNFS+ML EM TL+CH FKFT T TFQ   NHEKR+GLIT+LQYS GDRR
Sbjct: 1   MIRGHAGVAKPNFSLMLFEMSTLECHNFKFTATRTFQMPYNHEKRKGLITQLQYSHGDRR 60

Query: 61  TVSKSMHSTITSKPYSSQVGRKEGS-ASSLYSRPSLVEMKNVRLENRAKVYEFLRGIGVV 120
           TV KS+HSTI+SK YSS+V RKEGS  SSLYSRPSLVEMKNVRLENR+KVYEFLRGIGVV
Sbjct: 61  TVFKSLHSTISSKSYSSKVDRKEGSIGSSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVV 120

Query: 121 PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGV 180
           PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPL+LGCSVKKNMIPVLDYLGKLGV
Sbjct: 121 PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLILGCSVKKNMIPVLDYLGKLGV 180

Query: 181 RKSTFTEFLRRYPQVLHSSVVVDLAPVVKYLQGMDIKPSDVPRVLERYPEVLGFKLEGTM 240
           RKSTFTEFL+RYPQVLHSSVVVDLAPV+KYLQGMDIKP+D+PRVLERYPEVLGFKLEGTM
Sbjct: 181 RKSTFTEFLKRYPQVLHSSVVVDLAPVIKYLQGMDIKPNDIPRVLERYPEVLGFKLEGTM 240

Query: 241 STSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVDYLESLGIPRLAVARLIEKR 300
           STSVAYLVGIGV RREIGGVLTKYPEILGMRVARVIKPFV+YLE LGIPRLAVARLIEKR
Sbjct: 241 STSVAYLVGIGVTRREIGGVLTKYPEILGMRVARVIKPFVEYLEGLGIPRLAVARLIEKR 300

Query: 301 PHILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIE 360
           PHILGFGLEKKVKPNIQLLLEF VREAYL SIVAQYAEIIG+DLE  L +QRNLLKS+IE
Sbjct: 301 PHILGFGLEKKVKPNIQLLLEFKVREAYLPSIVAQYAEIIGIDLEANLQTQRNLLKSLIE 360

Query: 361 LDNDNFGTIIEKMPQIVSLSSSAVINHVDFLKSCGFSLLQVKNMVVGCPQLLALNIDIMK 420
           LDNDNFGTIIEKMPQ+VSLS SAVINHVDFLK+CGFSLLQVKNMV+GCPQLLALNIDIMK
Sbjct: 361 LDNDNFGTIIEKMPQVVSLSRSAVINHVDFLKTCGFSLLQVKNMVIGCPQLLALNIDIMK 420

Query: 421 HSFQFFQKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCSDEKFA 480
           HSF+FFQ EMGRPL+DL  FPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNC+DEKF 
Sbjct: 421 HSFEFFQMEMGRPLEDLATFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCADEKFM 480

Query: 481 ERMTYDTIDMEEMETAPMFDMNSLIQPRDDELDSDYEEDSEEE 523
           ERM+YDTIDMEEMET P FDMNSLIQPR+DE DS+YEEDSEEE
Sbjct: 481 ERMSYDTIDMEEMETTPTFDMNSLIQPRNDESDSEYEEDSEEE 523

[Close]

BLAST of Spg003650 vs. ExPASy TrEMBL
Match: A0A1S3CR33 (transcription termination factor MTERF4, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103503367 PE=3 SV=1)

HSP 1 Score: 921.8 bits (2381), Expect = 1.3e-264
Identity = 469/523 (89.67%), Postives = 492/523 (94.07%), Query Frame = 0


Query: 1   MIRGHAGVVKPNFSIMLLEMPTLKCHKFKFTTTSTFQTHPNHEKRRGLITKLQYSQGDRR 60
           MIRGHAGVVKPN S ML EM TL+CH FKFT T TF T   HEKRR L T+LQYS GDRR
Sbjct: 1   MIRGHAGVVKPNVSFMLFEMSTLECHNFKFTATPTFLTSCIHEKRRCLTTQLQYSHGDRR 60

Query: 61  TVSKSMHSTITSKPYSSQVGRKEGSA-SSLYSRPSLVEMKNVRLENRAKVYEFLRGIGVV 120
           TV KS+HSTI+SKPYSS+VGRK GS+ SSLYSRPSLVEMKNVRLENR+KVYEFLRGIGVV
Sbjct: 61  TVFKSLHSTISSKPYSSKVGRKGGSSGSSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVV 120

Query: 121 PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGV 180
           PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGV
Sbjct: 121 PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGV 180

Query: 181 RKSTFTEFLRRYPQVLHSSVVVDLAPVVKYLQGMDIKPSDVPRVLERYPEVLGFKLEGTM 240
           RKSTFTEFL+RYPQVLHSSVVVDLAPVVKYLQGMDIKP+D+PRVLERYPEVLGFKLEGTM
Sbjct: 181 RKSTFTEFLKRYPQVLHSSVVVDLAPVVKYLQGMDIKPNDIPRVLERYPEVLGFKLEGTM 240

Query: 241 STSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVDYLESLGIPRLAVARLIEKR 300
           STSVAYLVGIGVARREIGG+LTKYPEILGMRVARVIKPFV+YLE LGIPRLAVARLIEKR
Sbjct: 241 STSVAYLVGIGVARREIGGILTKYPEILGMRVARVIKPFVEYLEGLGIPRLAVARLIEKR 300

Query: 301 PHILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIE 360
           PHILGFGLEKKVKPNIQLLLEF VREAYL SIVAQYAEIIGMDLE  L +QRNLLKS+IE
Sbjct: 301 PHILGFGLEKKVKPNIQLLLEFKVREAYLPSIVAQYAEIIGMDLEANLQTQRNLLKSLIE 360

Query: 361 LDNDNFGTIIEKMPQIVSLSSSAVINHVDFLKSCGFSLLQVKNMVVGCPQLLALNIDIMK 420
           LDNDNFGTIIEKMPQIVSLS SAVINHVDFLK+CGFSLLQVKNMV+GCPQLLALNIDIMK
Sbjct: 361 LDNDNFGTIIEKMPQIVSLSRSAVINHVDFLKTCGFSLLQVKNMVIGCPQLLALNIDIMK 420

Query: 421 HSFQFFQKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCSDEKFA 480
           HSF+FFQ EMGRPL+DL  FPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNC+DEKF 
Sbjct: 421 HSFEFFQMEMGRPLEDLATFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCADEKFV 480

Query: 481 ERMTYDTIDMEEMETAPMFDMNSLIQPRDDELDSDYEEDSEEE 523
           ERM+YDTIDMEEMET P FDMNSL+QPR+DE DS+YEEDSEEE
Sbjct: 481 ERMSYDTIDMEEMETTPTFDMNSLVQPRNDESDSEYEEDSEEE 523

[Close]

BLAST of Spg003650 vs. TAIR 10
Match: AT4G02990.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 692.6 bits (1786), Expect = 2.5e-199
Identity = 360/534 (67.42%), Postives = 431/534 (80.71%), Query Frame = 0


Query: 2   IRGHAGVVKPNFSIMLLEMPTLKCHKFKFTTTSTFQTHPNHEKR--RGLITKLQYSQGDR 61
           IR   G  KP F ++  E P+    + +  + ST+    NH+KR   G+   +Q +  +R
Sbjct: 3   IRFCNGFTKPGFLLVHFEPPSFFAVRSRSLSDSTYGNLCNHKKRPGTGIGLTVQCAIANR 62

Query: 62  RTVSKSMHS--TITSKPYSSQVGR-------KEGSASSLYSRPSLVEMKNVRLENRAKVY 121
           R  S+S+ S     S   SS  GR       K   + SLYSRPSL++M   +  NRAKVY
Sbjct: 63  RFSSRSLDSPRRERSSRSSSSSGRDRDRDKDKGRDSKSLYSRPSLLDMNKEKAANRAKVY 122

Query: 122 EFLRGIGVVPDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPV 181
           EFLRGIG+VPDELDGLELPVT DVMKERV+FL KLGLTIEDINNYPLVLGCSVKKNM+PV
Sbjct: 123 EFLRGIGIVPDELDGLELPVTADVMKERVEFLHKLGLTIEDINNYPLVLGCSVKKNMVPV 182

Query: 182 LDYLGKLGVRKSTFTEFLRRYPQVLHSSVVVDLAPVVKYLQGMDIKPSDVPRVLERYPEV 241
           LDYLGKLGVRKSTFTEFLRRYPQVLHSSVV+DLAPVVKYLQG+DIKPSDVPRVLERYPEV
Sbjct: 183 LDYLGKLGVRKSTFTEFLRRYPQVLHSSVVIDLAPVVKYLQGLDIKPSDVPRVLERYPEV 242

Query: 242 LGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVDYLESLGIPRL 301
           LGFKLEGTMSTSVAYLVGIGVARREIGG+LT+YPEILGMRVAR+IKP V+YLE LGIPRL
Sbjct: 243 LGFKLEGTMSTSVAYLVGIGVARREIGGILTRYPEILGMRVARIIKPLVEYLEVLGIPRL 302

Query: 302 AVARLIEKRPHILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQ 361
           A ARLIEKRPHILGF L+  VKPN+Q+L +FNVRE  L SI+AQY EIIG+DL+ KL +Q
Sbjct: 303 AAARLIEKRPHILGFELDDTVKPNVQILQDFNVRETSLPSIIAQYPEIIGIDLKPKLDTQ 362

Query: 362 RNLLKSIIELDNDNFGTIIEKMPQIVSLSSSAVINHVDFLKSCGFSLLQVKNMVVGCPQL 421
           R LL S I L+ ++ G++IE+MPQ VSLS S ++ H+DFL  CGFS+ Q + MV+GCPQ+
Sbjct: 363 RKLLCSAIHLNPEDLGSLIERMPQFVSLSESPMLKHIDFLTKCGFSIDQTREMVIGCPQV 422

Query: 422 LALNIDIMKHSFQFFQKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGISCSLSWL 481
           LALN+ IMK SF++FQKEM RPL DLV FPAFFTYGLEST+KPRH+K+++KGI CSL+W+
Sbjct: 423 LALNLGIMKLSFEYFQKEMKRPLQDLVDFPAFFTYGLESTVKPRHKKIIKKGIKCSLAWM 482

Query: 482 LNCSDEKFAERMTYDTIDMEEMETAP-MFDMNSLIQP-RDDELDSDYEEDSEEE 523
           LNCSDEKF +RM+YDTID+EE+ET P  FDMN+L+QP R++E DS+YEE+ +++
Sbjct: 483 LNCSDEKFEQRMSYDTIDIEEVETDPSSFDMNTLMQPEREEESDSEYEEEEDDD 536

[Close]

BLAST of Spg003650 vs. TAIR 10
Match: AT2G44020.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 451.4 bits (1160), Expect = 9.6e-127
Identity = 212/428 (49.53%), Postives = 317/428 (74.07%), Query Frame = 0


Query: 95  LVEMKNVRLENRAKVYEFLRGIGVVPDELDGLELPVTVDVMKERVDFLLKLGLTIEDINN 154
           +++ K  +L NR K+ ++L+G+G++ DEL+ +ELP T++VM ERV+FL KLGLTI+DIN 
Sbjct: 72  VIQGKKEKLVNRVKICDYLKGLGIITDELESIELPSTIEVMCERVEFLQKLGLTIDDINE 131

Query: 155 YPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTEFLRRYPQVLHSSVVVDLAPVVKYLQGMD 214
           YPL+LGCSV+KN+IPVL YL K+G+ +S   EF++ YPQVLH+SVVV+LAPVVK+L+G+D
Sbjct: 132 YPLMLGCSVRKNLIPVLAYLEKIGISRSKLGEFVKNYPQVLHASVVVELAPVVKFLRGLD 191

Query: 215 IKPSDVPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPEILGMRVARV 274
           ++  D+  VL +YPE+LGFKLEGTMSTSVAYLV IGV+ R+IG ++T+YP +LGMRV  +
Sbjct: 192 VEKQDLGYVLMKYPELLGFKLEGTMSTSVAYLVSIGVSPRDIGPMVTQYPYLLGMRVGTM 251

Query: 275 IKPFVDYLESLGIPRLAVARLIEKRPHILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQ 334
           IKP VDYL S+G+P+  VAR++EKR +I+G+ LE+ VKPN+  L+ F V++  L  ++AQ
Sbjct: 252 IKPLVDYLISIGLPKKIVARMLEKRSYIVGYNLEETVKPNVDCLISFGVKKELLPLLIAQ 311

Query: 335 YAEIIGMDLETKLPSQRNLLKSIIELDNDNFGTIIEKMPQIVSLSSSAVINHVDFLKSCG 394
           Y +I+G+ ++ K+ +Q+      +++D + F  ++EKMPQIVSL  + ++  ++FL    
Sbjct: 312 YPQILGLPVKAKMSTQQYFFSLKLKIDPEGFARVVEKMPQIVSLKQNVIMKPIEFLLGRA 371

Query: 395 FSLLQVKNMVVGCPQLLALNIDIMKHSFQFFQKEMGRPLDDLVAFPAFFTYGLESTIKPR 454
           F +  +  MVV CPQ+L   +++MK+S+ F++ EMGRP+ +LV +P +FTY LES IKPR
Sbjct: 372 FQVEDIAKMVVRCPQILCSRVELMKNSYYFYKTEMGRPMKELVEYPEYFTYSLESRIKPR 431

Query: 455 HRKVVQKGISCSLSWLLNCSDEKFAERMTYDTIDMEEMETAPMFDMNSLIQPRDDELDSD 514
           ++K+  KGI  SL+W LNCSD++F ER+  + ID +     P FDM   ++    E+ +D
Sbjct: 432 YQKLQSKGIRSSLNWFLNCSDQRFEERLQGNFIDPD--TEGPTFDMGGKLEMPGGEIVTD 491

Query: 515 YEEDSEEE 523
            EED  ++
Sbjct: 492 EEEDESDD 497

[Close]

BLAST of Spg003650 vs. TAIR 10
Match: AT2G21710.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 149.8 bits (377), Expect = 6.0e-36
Identity = 93/363 (25.62%), Postives = 181/363 (49.86%), Query Frame = 0


Query: 164 KKNMIPVLDYLGKLGVRKSTFTEFLRRYPQVLHSSVVVDLAPVVKYLQGMDIKPSDVPRV 223
           ++ +  +++YL   GVR+      + R P++L  S + ++   V +   M +  +D   +
Sbjct: 278 REELNEIVEYLESNGVRRDWMGYVVGRCPELLSFS-MEEVKSRVDFFLKMGMNQNDFGTM 337

Query: 224 LERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVDYLE 283
           +  YP+++GF     M   + YL   G++  E+G +L   P ++G  +    KP V Y  
Sbjct: 338 VYDYPKIIGFFSFQVMEKKINYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFY 397

Query: 284 SLGIPRLAVARLIEKRPHILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDL 343
            LGIP+  + R++  +P +    LEK + P ++ L E  +    + +++ ++  ++   L
Sbjct: 398 YLGIPKEGMKRILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNSL 457

Query: 344 ETKLPSQRNLLKSIIELDNDNFGTIIEKMPQIVSLSSSAVIN-HVDFLKSCGFSLLQVKN 403
             K+      L +   +   + G +I   P ++  S    +  ++ +  S G    Q+  
Sbjct: 458 YKKIRPVVIFLLTRAGVTQKDIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGE 517

Query: 404 MVVGCPQLLALNIDIMKHSFQFFQKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKG 463
           M+   P LL  N+D ++  +++ ++ M RPL DL+ FP FF+Y LE  I PRH  +V+  
Sbjct: 518 MIADFPMLLRYNVDNLRPKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVENR 577

Query: 464 ISCSLSWLLNCSDEKFAERMTYDTIDMEEMETAPMFDMNSLIQPRDDELDSD---YEEDS 523
           ++  L ++L C+DE+F ER   D ++  E   A +   +S  QP D+ +      + +++
Sbjct: 578 VNFKLRYMLACTDEEF-ERRVRDKVERRERFEAGLDSEDS--QPSDENISDQEIAFSDEA 636

[Close]

BLAST of Spg003650 vs. TAIR 10
Match: AT4G38160.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 139.8 bits (351), Expect = 6.2e-33
Identity = 68/276 (24.64%), Postives = 147/276 (53.26%), Query Frame = 0


Query: 215 IKPSDVPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPEILGMRVARV 274
           I+   +P ++ R P++L  +L+  +   V  L  +G   RE+   +TK+P IL   V   
Sbjct: 54  IQERKLPYIVSRCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEK 113

Query: 275 IKPFVDYLESLGIPRLAVARLIEKRPHILGFGLEKKVKPNIQLLLEFNV-REAYLSSIVA 334
           + P + + ++LG+P   + ++I   P ++ + ++ K+   +  L    + ++  +  ++ 
Sbjct: 114 LCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLV 173

Query: 335 QYAEIIGMDLETKLPSQRNLLKSIIELDNDNFGTIIEKMPQIVSLSSSAVIN-HVDFLKS 394
           +   ++G  ++ +L      LKS + L  D   +++   PQ++    + ++  + D+LK 
Sbjct: 174 KNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKE 233

Query: 395 CGFSLLQVKNMVVGCPQLLALNI-DIMKHSFQFFQKEMGRPLDDLVAFPAFFTYGLESTI 454
           CGF   Q+  MV G PQ+L  ++ + ++   +F  + MGR +D++ ++P FF +GL+  +
Sbjct: 234 CGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKV 293

Query: 455 KPRHRKVVQKGISCSLSWLLNCSDEKFAERMTYDTI 488
           + R + V +  I CSL  +L+C+ +KF E+  +  +
Sbjct: 294 ESRFKLVKKNNIDCSLREMLDCNTKKFHEKFGFSEV 329

[Close]

BLAST of Spg003650 vs. TAIR 10
Match: AT4G38160.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 139.8 bits (351), Expect = 6.2e-33
Identity = 68/276 (24.64%), Postives = 147/276 (53.26%), Query Frame = 0


Query: 215 IKPSDVPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPEILGMRVARV 274
           I+   +P ++ R P++L  +L+  +   V  L  +G   RE+   +TK+P IL   V   
Sbjct: 54  IQERKLPYIVSRCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEK 113

Query: 275 IKPFVDYLESLGIPRLAVARLIEKRPHILGFGLEKKVKPNIQLLLEFNV-REAYLSSIVA 334
           + P + + ++LG+P   + ++I   P ++ + ++ K+   +  L    + ++  +  ++ 
Sbjct: 114 LCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLV 173

Query: 335 QYAEIIGMDLETKLPSQRNLLKSIIELDNDNFGTIIEKMPQIVSLSSSAVIN-HVDFLKS 394
           +   ++G  ++ +L      LKS + L  D   +++   PQ++    + ++  + D+LK 
Sbjct: 174 KNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKE 233

Query: 395 CGFSLLQVKNMVVGCPQLLALNI-DIMKHSFQFFQKEMGRPLDDLVAFPAFFTYGLESTI 454
           CGF   Q+  MV G PQ+L  ++ + ++   +F  + MGR +D++ ++P FF +GL+  +
Sbjct: 234 CGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKV 293

Query: 455 KPRHRKVVQKGISCSLSWLLNCSDEKFAERMTYDTI 488
           + R + V +  I CSL  +L+C+ +KF E+  +  +
Sbjct: 294 ESRFKLVKKNNIDCSLREMLDCNTKKFHEKFGFSEV 329

The following BLAST results are available for this feature:

BLAST of Spg003650 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7021053.1	2.1e-280	94.44	Transcription termination factor MTERF4, chloroplastic, partial [Cucurbita argyr...	[more]
XP_023538106.1	2.7e-280	94.64	transcription termination factor MTERF4, chloroplastic [Cucurbita pepo subsp. pe...	[more]
KAG6586221.1	3.5e-280	94.44	Transcription termination factor MTERF4, chloroplastic, partial [Cucurbita argyr...	[more]
XP_022938209.1	4.6e-280	94.64	transcription termination factor MTERF4, chloroplastic [Cucurbita moschata] >XP_...	[more]
XP_022965673.1	1.6e-277	93.87	transcription termination factor MTERF4, chloroplastic [Cucurbita maxima] >XP_02...	[more]

BLAST of Spg003650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZT96	3.5e-198	67.42	Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q6AUK6	8.1e-163	64.68	Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. ja...	[more]
B6TGN4	1.4e-159	62.53	Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MT...	[more]
F4IHL3	8.4e-35	25.62	Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9SZL6	8.7e-32	24.64	Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop...	[more]

BLAST of Spg003650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FDE7	2.2e-280	94.64	transcription termination factor MTERF4, chloroplastic OS=Cucurbita moschata OX=...	[more]
A0A6J1HPD6	7.9e-278	93.87	transcription termination factor MTERF4, chloroplastic OS=Cucurbita maxima OX=36...	[more]
A0A6J1DUY1	1.3e-269	91.38	transcription termination factor MTERF4, chloroplastic OS=Momordica charantia OX...	[more]
A0A0A0KRV7	2.6e-265	89.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G466880 PE=3 SV=1	[more]
A0A1S3CR33	1.3e-264	89.67	transcription termination factor MTERF4, chloroplastic OS=Cucumis melo OX=3656 G...	[more]

BLAST of Spg003650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02990.1	2.5e-199	67.42	Mitochondrial transcription termination factor family protein	[more]
AT2G44020.1	9.6e-127	49.53	Mitochondrial transcription termination factor family protein	[more]
AT2G21710.1	6.0e-36	25.62	Mitochondrial transcription termination factor family protein	[more]
AT4G38160.1	6.2e-33	24.64	Mitochondrial transcription termination factor family protein	[more]
AT4G38160.2	6.2e-33	24.64	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 433..464 e-value: 0.024 score: 23.8 coord: 185..216 e-value: 7.6E-4 score: 28.8 coord: 257..288 e-value: 1.5E-4 score: 31.1 coord: 221..252 e-value: 0.0053 score: 26.0 coord: 366..396 e-value: 0.0068 score: 25.6 coord: 329..361 e-value: 700.0 score: 5.1 coord: 86..119 e-value: 740.0 score: 4.9 coord: 401..432 e-value: 0.041 score: 23.0 coord: 293..324 e-value: 3.6E-4 score: 29.9 coord: 149..180 e-value: 0.0039 score: 26.4
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 171..479 e-value: 4.3E-106 score: 354.4
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 31..512
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 134..274 e-value: 2.6E-25 score: 91.0 coord: 275..488 e-value: 1.3E-49 score: 170.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 503..523
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..84
None	No IPR available	PANTHER	PTHR13068:SF109	TRANSCRIPTION TERMINATION FACTOR MTERF4, CHLOROPLASTIC	coord: 31..512

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg003650.1	Spg003650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0042794	plastid rRNA transcription
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0008380	RNA splicing
cellular_component	GO:0009536	plastid
molecular_function	GO:0003690	double-stranded DNA binding
molecular_function	GO:0003729	mRNA binding