Spg003620 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg003620
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Pentatricopeptide repeat-containing protein
Location	scaffold4: 49143465 .. 49145252 (+)
RNA-Seq Expression	Spg003620
Synteny	Spg003620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAGTAGAGAGTGGAAGCAAGAATCAGACGCACAATCTGAGAGACCTAACAGAATACCTGGGTGTAAACGAACAAGGATTGTGATTGAGAATATATGGGAAGATAGAGCAGAGCCTAGTGATGGAGTGGGGCTGCAGATGACCCTCTTATTCTTCTCTAGCCGTGCCTACAGGTTTCGAGCTTCCAATTTCTCCATTGCCCAGTTTTATAGCTTTGCCGACGGAGTATCACGCGCTCGACCCTTTTATGATAGAGAGGTAATACGAAATCCGGAGGCTTGGCTAGTGAAGGTTGTTTGCACTCTCTTTTTTCGATCGCATTCCTCGAATGCTTGCTTTGGTTATCTAAGTAGAAACTTGAACCCTTCAATCGCTTTCGAGGTTATTAAGCGGTTTAGAGATCCATTATTGGGTTTGAAGTTTTTTGAGTTTAGTAGAACACACCTGAGCATTAATCATACTTTTAATACCTATGATTTGCTCTTGAGGAATCTCTGTCAAATGGGTCTCCATGATTCTGCAAAAATTGTGTTTGATTGCATGAGGAGTGATGGGATTTTTCCGGATAGTTCCATTGTGGAACTCTTGGTGTCTTCATCTGCTCAAATGGGAAAGATAGATTCTGCCAAAAAATTTCTTGACGAGGTTCACTGTTATGGTATTAAAGTGAGCCCTTTTGTGTACAATAATTTGTTGAATATGTTGGTCAAGCAGAACCAAGTAGATGAAGCTGTCTTACTATTTAGAGAGCACTTGGAACCATATTTTATTCCAGATGTTTACACCTTCAATATTCTAATTAGAGGTTTGTGCAGAATAGGAGAAATTGACAAGGCTTTTGAGTTTTTCCAGAATATGGGAAATTTTGGTTGCTTTCCTGATATTGTTTCATATAATACGCTTATAAATGGGTTTTGTAGGGTTAATGAGATTAGTAAAGGGCATGATTTGTTAAAAGAAGTTCAGTCAATGAAAGGGGTTTCCCCAGATGTTATAACCTACACATCGATTATATCAGGCTATTGCAAATTGGGTGATATGCAGGCAGCTTCTGAGCTTTTTGATGAGATGGTTAGTTCTGGAATCAAACCCAATGACTTCACTTTCAATGTCCTCATTGATGGTTTTGGTAAAGCTGGAGACATGAGATCTGCTTTGGTCATGTACGAGAAAATGCTTCTTCTAGGCTGTACACCAGACGTGGTTACAATTACTTCCCTAATTGATGGCTATTGCCGAGCAGGTGAAGTGCATCAAGGTTTGAAGCTCTGGGAGGAGATGATAGTAAGAGACCTGTCTCCAAATGTGTATACCTATGCTGTTCTCATCAATGCTCTCTGTAAGGAAAATAGAATACAAGAGGCGAGAAATTTTTTGAGGTACTTGAAATTGAGTGAGGTTGTTCCTAAACCATTTATTTATAATCCTGTGATTGATGGGTTTTGCAAGGCTGGGAAGGTGGATGAGGCAAATGTCATAGTGGCTGAGATGCAGGAGAAGAAATGCAGCCCAGATAAAATAACTTTTACCATTCTCATTATTGGAAACTGTATGAAAGGGAGAATGGTTGAAGCAATTAGCCTTTTTTATAAGATGTTGGAAACCAACTGTATTCCAGATGAAATAACTATTAATTCTTTAATTTCTTGCCTTCTGAAGGCTGGAATGCCTAATGAAGCCTCTCAAATCAAACAAGCTGCTTTAGAGAACCTGAACTTGGGCTTGTTATCGTTGAGAAGTCCGCTTACTAGAAGAAAATCTTCATGTGTGCCGGTTGCTGTCTGA

mRNA sequence

ATGAAGAGTAGAGAGTGGAAGCAAGAATCAGACGCACAATCTGAGAGACCTAACAGAATACCTGGGTGTAAACGAACAAGGATTGTGATTGAGAATATATGGGAAGATAGAGCAGAGCCTAGTGATGGAGTGGGGCTGCAGATGACCCTCTTATTCTTCTCTAGCCGTGCCTACAGGTTTCGAGCTTCCAATTTCTCCATTGCCCAGTTTTATAGCTTTGCCGACGGAGTATCACGCGCTCGACCCTTTTATGATAGAGAGGTAATACGAAATCCGGAGGCTTGGCTAGTGAAGGTTGTTTGCACTCTCTTTTTTCGATCGCATTCCTCGAATGCTTGCTTTGGTTATCTAAGTAGAAACTTGAACCCTTCAATCGCTTTCGAGGTTATTAAGCGGTTTAGAGATCCATTATTGGGTTTGAAGTTTTTTGAGTTTAGTAGAACACACCTGAGCATTAATCATACTTTTAATACCTATGATTTGCTCTTGAGGAATCTCTGTCAAATGGGTCTCCATGATTCTGCAAAAATTGTGTTTGATTGCATGAGGAGTGATGGGATTTTTCCGGATAGTTCCATTGTGGAACTCTTGGTGTCTTCATCTGCTCAAATGGGAAAGATAGATTCTGCCAAAAAATTTCTTGACGAGGTTCACTGTTATGGTATTAAAGTGAGCCCTTTTGTGTACAATAATTTGTTGAATATGTTGGTCAAGCAGAACCAAGTAGATGAAGCTGTCTTACTATTTAGAGAGCACTTGGAACCATATTTTATTCCAGATGTTTACACCTTCAATATTCTAATTAGAGGTTTGTGCAGAATAGGAGAAATTGACAAGGCTTTTGAGTTTTTCCAGAATATGGGAAATTTTGGTTGCTTTCCTGATATTGTTTCATATAATACGCTTATAAATGGGTTTTGTAGGGTTAATGAGATTAGTAAAGGGCATGATTTGTTAAAAGAAGTTCAGTCAATGAAAGGGGTTTCCCCAGATGTTATAACCTACACATCGATTATATCAGGCTATTGCAAATTGGGTGATATGCAGGCAGCTTCTGAGCTTTTTGATGAGATGGTTAGTTCTGGAATCAAACCCAATGACTTCACTTTCAATGTCCTCATTGATGGTTTTGGTAAAGCTGGAGACATGAGATCTGCTTTGGTCATGTACGAGAAAATGCTTCTTCTAGGCTGTACACCAGACGTGGTTACAATTACTTCCCTAATTGATGGCTATTGCCGAGCAGGTGAAGTGCATCAAGGTTTGAAGCTCTGGGAGGAGATGATAGTAAGAGACCTGTCTCCAAATGTGTATACCTATGCTGTTCTCATCAATGCTCTCTGTAAGGAAAATAGAATACAAGAGGCGAGAAATTTTTTGAGGTACTTGAAATTGAGTGAGGTTGTTCCTAAACCATTTATTTATAATCCTGTGATTGATGGGTTTTGCAAGGCTGGGAAGGTGGATGAGGCAAATGTCATAGTGGCTGAGATGCAGGAGAAGAAATGCAGCCCAGATAAAATAACTTTTACCATTCTCATTATTGGAAACTGTATGAAAGGGAGAATGGTTGAAGCAATTAGCCTTTTTTATAAGATGTTGGAAACCAACTGTATTCCAGATGAAATAACTATTAATTCTTTAATTTCTTGCCTTCTGAAGGCTGGAATGCCTAATGAAGCCTCTCAAATCAAACAAGCTGCTTTAGAGAACCTGAACTTGGGCTTGTTATCGTTGAGAAGTCCGCTTACTAGAAGAAAATCTTCATGTGTGCCGGTTGCTGTCTGA

Coding sequence (CDS)

ATGAAGAGTAGAGAGTGGAAGCAAGAATCAGACGCACAATCTGAGAGACCTAACAGAATACCTGGGTGTAAACGAACAAGGATTGTGATTGAGAATATATGGGAAGATAGAGCAGAGCCTAGTGATGGAGTGGGGCTGCAGATGACCCTCTTATTCTTCTCTAGCCGTGCCTACAGGTTTCGAGCTTCCAATTTCTCCATTGCCCAGTTTTATAGCTTTGCCGACGGAGTATCACGCGCTCGACCCTTTTATGATAGAGAGGTAATACGAAATCCGGAGGCTTGGCTAGTGAAGGTTGTTTGCACTCTCTTTTTTCGATCGCATTCCTCGAATGCTTGCTTTGGTTATCTAAGTAGAAACTTGAACCCTTCAATCGCTTTCGAGGTTATTAAGCGGTTTAGAGATCCATTATTGGGTTTGAAGTTTTTTGAGTTTAGTAGAACACACCTGAGCATTAATCATACTTTTAATACCTATGATTTGCTCTTGAGGAATCTCTGTCAAATGGGTCTCCATGATTCTGCAAAAATTGTGTTTGATTGCATGAGGAGTGATGGGATTTTTCCGGATAGTTCCATTGTGGAACTCTTGGTGTCTTCATCTGCTCAAATGGGAAAGATAGATTCTGCCAAAAAATTTCTTGACGAGGTTCACTGTTATGGTATTAAAGTGAGCCCTTTTGTGTACAATAATTTGTTGAATATGTTGGTCAAGCAGAACCAAGTAGATGAAGCTGTCTTACTATTTAGAGAGCACTTGGAACCATATTTTATTCCAGATGTTTACACCTTCAATATTCTAATTAGAGGTTTGTGCAGAATAGGAGAAATTGACAAGGCTTTTGAGTTTTTCCAGAATATGGGAAATTTTGGTTGCTTTCCTGATATTGTTTCATATAATACGCTTATAAATGGGTTTTGTAGGGTTAATGAGATTAGTAAAGGGCATGATTTGTTAAAAGAAGTTCAGTCAATGAAAGGGGTTTCCCCAGATGTTATAACCTACACATCGATTATATCAGGCTATTGCAAATTGGGTGATATGCAGGCAGCTTCTGAGCTTTTTGATGAGATGGTTAGTTCTGGAATCAAACCCAATGACTTCACTTTCAATGTCCTCATTGATGGTTTTGGTAAAGCTGGAGACATGAGATCTGCTTTGGTCATGTACGAGAAAATGCTTCTTCTAGGCTGTACACCAGACGTGGTTACAATTACTTCCCTAATTGATGGCTATTGCCGAGCAGGTGAAGTGCATCAAGGTTTGAAGCTCTGGGAGGAGATGATAGTAAGAGACCTGTCTCCAAATGTGTATACCTATGCTGTTCTCATCAATGCTCTCTGTAAGGAAAATAGAATACAAGAGGCGAGAAATTTTTTGAGGTACTTGAAATTGAGTGAGGTTGTTCCTAAACCATTTATTTATAATCCTGTGATTGATGGGTTTTGCAAGGCTGGGAAGGTGGATGAGGCAAATGTCATAGTGGCTGAGATGCAGGAGAAGAAATGCAGCCCAGATAAAATAACTTTTACCATTCTCATTATTGGAAACTGTATGAAAGGGAGAATGGTTGAAGCAATTAGCCTTTTTTATAAGATGTTGGAAACCAACTGTATTCCAGATGAAATAACTATTAATTCTTTAATTTCTTGCCTTCTGAAGGCTGGAATGCCTAATGAAGCCTCTCAAATCAAACAAGCTGCTTTAGAGAACCTGAACTTGGGCTTGTTATCGTTGAGAAGTCCGCTTACTAGAAGAAAATCTTCATGTGTGCCGGTTGCTGTCTGA

Protein sequence

MKSREWKQESDAQSERPNRIPGCKRTRIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRFRASNFSIAQFYSFADGVSRARPFYDREVIRNPEAWLVKVVCTLFFRSHSSNACFGYLSRNLNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLLRNLCQMGLHDSAKIVFDCMRSDGIFPDSSIVELLVSSSAQMGKIDSAKKFLDEVHCYGIKVSPFVYNNLLNMLVKQNQVDEAVLLFREHLEPYFIPDVYTFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEVQSMKGVSPDVITYTSIISGYCKLGDMQAASELFDEMVSSGIKPNDFTFNVLIDGFGKAGDMRSALVMYEKMLLLGCTPDVVTITSLIDGYCRAGEVHQGLKLWEEMIVRDLSPNVYTYAVLINALCKENRIQEARNFLRYLKLSEVVPKPFIYNPVIDGFCKAGKVDEANVIVAEMQEKKCSPDKITFTILIIGNCMKGRMVEAISLFYKMLETNCIPDEITINSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRRKSSCVPVAV

Homology

[Close]

BLAST of Spg003620 vs. NCBI nr
Match: KAG7030515.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1104.0 bits (2854), Expect = 0.0e+00
Identity = 540/595 (90.76%), Postives = 567/595 (95.29%), Query Frame = 0


Query: 1   MKSREWKQESDAQSERPNRIPGCKRTRIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRF 60
           MKSREWKQES  QSE PNRIPGCKR RIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRF
Sbjct: 1   MKSREWKQESVTQSEGPNRIPGCKRARIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRF 60

Query: 61  RASNFSIAQFYSFADGVSRARPFYDREVIRNPEAWLVKVVCTLFFRSHSSNACFGYLSRN 120
           RASNF IAQFYS ADGVSRARPF DREVIRNPEAWLVKVVCTLFFRSHS NACFGYLSRN
Sbjct: 61  RASNFFIAQFYSIADGVSRARPFCDREVIRNPEAWLVKVVCTLFFRSHSLNACFGYLSRN 120

Query: 121 LNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLLRNLCQMGLHDSAKIVFD 180
           LNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLL+RNLCQMGL+DSAK VFD
Sbjct: 121 LNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLVRNLCQMGLNDSAKTVFD 180

Query: 181 CMRSDGIFPDSSIVELLVSSSAQMGKIDSAKKFLDEVHCYGIKVSPFVYNNLLNMLVKQN 240
           CMR+DGI PDSSIVE+LVSS +++GK+D+AK FLDE+HCYGIKVSPFVYNN LNMLVKQN
Sbjct: 181 CMRADGILPDSSIVEILVSSYSRLGKLDAAKNFLDEIHCYGIKVSPFVYNNFLNMLVKQN 240

Query: 241 QVDEAVLLFREHLEPYFIPDVYTFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYN 300
           QVDEAVLLFREHLEPYF PDVYTFNILIRGLCRIGE DKAFE+ QNM NFGCFPDIVSYN
Sbjct: 241 QVDEAVLLFREHLEPYFTPDVYTFNILIRGLCRIGETDKAFEYLQNMENFGCFPDIVSYN 300

Query: 301 TLINGFCRVNEISKGHDLLKEVQSMKGVSPDVITYTSIISGYCKLGDMQAASELFDEMVS 360
           TLINGFCRVN++SKGHDLLKEVQS+KGVSPDVITYTSIISGYCKLGDM+AASELFDEMVS
Sbjct: 301 TLINGFCRVNDVSKGHDLLKEVQSIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVS 360

Query: 361 SGIKPNDFTFNVLIDGFGKAGDMRSALVMYEKMLLLGCTPDVVTITSLIDGYCRAGEVHQ 420
           SGIKPNDFTFNVLIDGFGKAG+MR AL MY+KMLLLGC PDVVT+TSLIDGYCRAGEV+Q
Sbjct: 361 SGIKPNDFTFNVLIDGFGKAGEMRLALAMYDKMLLLGCLPDVVTVTSLIDGYCRAGEVNQ 420

Query: 421 GLKLWEEMIVRDLSPNVYTYAVLINALCKENRIQEARNFLRYLKLSEVVPKPFIYNPVID 480
           GLKLWEEM VRDLSPNVYTYAVLINALCKENRIQEARNFLR+LK SE+VPKPFIYNPVID
Sbjct: 421 GLKLWEEMKVRDLSPNVYTYAVLINALCKENRIQEARNFLRHLKSSEIVPKPFIYNPVID 480

Query: 481 GFCKAGKVDEANVIVAEMQEKKCSPDKITFTILIIGNCMKGRMVEAISLFYKMLETNCIP 540
           GFCKAGKVDEANVIVAEMQEKKC PDKITFTILIIGNCMKGRMVEAI++FYKMLET CIP
Sbjct: 481 GFCKAGKVDEANVIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAINIFYKMLETKCIP 540

Query: 541 DEITINSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRRKSSCVPVAV 596
           DEITINSLISCLLKAGMP+EASQIKQAA ENLN  LLSL++PLT RKSSCVPVA+
Sbjct: 541 DEITINSLISCLLKAGMPDEASQIKQAAFENLNFDLLSLKNPLT-RKSSCVPVAI 594

[Close]

BLAST of Spg003620 vs. NCBI nr
Match: XP_023546864.1 (pentatricopeptide repeat-containing protein At2g06000 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1102.8 bits (2851), Expect = 0.0e+00
Identity = 540/595 (90.76%), Postives = 566/595 (95.13%), Query Frame = 0


Query: 1   MKSREWKQESDAQSERPNRIPGCKRTRIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRF 60
           MKSREWKQES  QSE PNRIPGCKR RIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRF
Sbjct: 1   MKSREWKQESVTQSEGPNRIPGCKRARIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRF 60

Query: 61  RASNFSIAQFYSFADGVSRARPFYDREVIRNPEAWLVKVVCTLFFRSHSSNACFGYLSRN 120
           RASNF IAQFYS ADGVSRARPF DREVIRNPEAWLVKVVCTLFFRSHS NACFGYLSRN
Sbjct: 61  RASNFFIAQFYSIADGVSRARPFCDREVIRNPEAWLVKVVCTLFFRSHSLNACFGYLSRN 120

Query: 121 LNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLLRNLCQMGLHDSAKIVFD 180
           LNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLL+RNLCQMGL+DSAK VFD
Sbjct: 121 LNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLVRNLCQMGLNDSAKTVFD 180

Query: 181 CMRSDGIFPDSSIVELLVSSSAQMGKIDSAKKFLDEVHCYGIKVSPFVYNNLLNMLVKQN 240
           CMR+DGI PDSSIVE+LVSS A++GK+D+AK FLDE+HCYGIKVSPFVYNN LNMLVKQN
Sbjct: 181 CMRTDGILPDSSIVEILVSSYARLGKLDAAKNFLDEIHCYGIKVSPFVYNNFLNMLVKQN 240

Query: 241 QVDEAVLLFREHLEPYFIPDVYTFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYN 300
           QVDEAVLLFREHLEPYF PDVYTFNILIRGLCRIGE DKAFE+ QNM NFGCFPDIVSYN
Sbjct: 241 QVDEAVLLFREHLEPYFTPDVYTFNILIRGLCRIGETDKAFEYLQNMENFGCFPDIVSYN 300

Query: 301 TLINGFCRVNEISKGHDLLKEVQSMKGVSPDVITYTSIISGYCKLGDMQAASELFDEMVS 360
           TLINGFCRVNE+SKGHDLLKEVQS+KGVSPDVITYTSIISGYCKLGDM+AASELFDEMVS
Sbjct: 301 TLINGFCRVNEVSKGHDLLKEVQSIKGVSPDVITYTSIISGYCKLGDMRAASELFDEMVS 360

Query: 361 SGIKPNDFTFNVLIDGFGKAGDMRSALVMYEKMLLLGCTPDVVTITSLIDGYCRAGEVHQ 420
           SGIKPNDFTFNVLIDGFGKAG+MR AL MY+KMLLLGC PDVVT+TSLIDGYCRAGEV+Q
Sbjct: 361 SGIKPNDFTFNVLIDGFGKAGEMRLALAMYDKMLLLGCLPDVVTVTSLIDGYCRAGEVNQ 420

Query: 421 GLKLWEEMIVRDLSPNVYTYAVLINALCKENRIQEARNFLRYLKLSEVVPKPFIYNPVID 480
           GLKLWEEM VRDLSPNVYTYAVLINALCKENRIQEARNFLR+LKLSE+VPKPFIYNPVID
Sbjct: 421 GLKLWEEMEVRDLSPNVYTYAVLINALCKENRIQEARNFLRHLKLSEIVPKPFIYNPVID 480

Query: 481 GFCKAGKVDEANVIVAEMQEKKCSPDKITFTILIIGNCMKGRMVEAISLFYKMLETNCIP 540
           GFCKAGKVDEANVIVAEMQEK+C PDKITFTILIIGNCMKGRMVEAI++FYKMLET CIP
Sbjct: 481 GFCKAGKVDEANVIVAEMQEKRCRPDKITFTILIIGNCMKGRMVEAINIFYKMLETKCIP 540

Query: 541 DEITINSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRRKSSCVPVAV 596
           DEITINSLISCLLKAGMP+EASQIKQAA ENLN  L SL++PLT  KSSCVPVA+
Sbjct: 541 DEITINSLISCLLKAGMPDEASQIKQAAFENLNFDLSSLKNPLT-TKSSCVPVAI 594

[Close]

BLAST of Spg003620 vs. NCBI nr
Match: XP_038890050.1 (pentatricopeptide repeat-containing protein At2g06000 [Benincasa hispida])

HSP 1 Score: 1102.4 bits (2850), Expect = 0.0e+00
Identity = 544/595 (91.43%), Postives = 569/595 (95.63%), Query Frame = 0


Query: 1   MKSREWKQESDAQSERPNRIPGCKRTRIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRF 60
           MK R+WKQ SD QSERP+RIPGCKR RIVIENIWEDRAEPSDGVGLQMTLLFFSSR YRF
Sbjct: 1   MKCRDWKQISDTQSERPSRIPGCKRARIVIENIWEDRAEPSDGVGLQMTLLFFSSRTYRF 60

Query: 61  RASNFSIAQFYSFADGVSRARPFYDREVIRNPEAWLVKVVCTLFFRSHSSNACFGYLSRN 120
           RASNFSIAQFYS ADGVSRARPF DREV+RNPE WLVKVVCTLFFRS S NACFGYLSRN
Sbjct: 61  RASNFSIAQFYSLADGVSRARPFCDREVLRNPETWLVKVVCTLFFRSISLNACFGYLSRN 120

Query: 121 LNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLLRNLCQMGLHDSAKIVFD 180
           LNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSI HTFNTYDLL+RNLCQMGL+DSAKIVFD
Sbjct: 121 LNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSIKHTFNTYDLLVRNLCQMGLNDSAKIVFD 180

Query: 181 CMRSDGIFPDSSIVELLVSSSAQMGKIDSAKKFLDEVHCYGIKVSPFVYNNLLNMLVKQN 240
           CMRSDGI PDSSIVEL+VSS AQMGK+DSAK FL+EVH YGIKVSPFVYNNLLNMLVKQN
Sbjct: 181 CMRSDGILPDSSIVELMVSSYAQMGKLDSAKNFLNEVHRYGIKVSPFVYNNLLNMLVKQN 240

Query: 241 QVDEAVLLFREHLEPYFIPDVYTFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYN 300
            VDEAVLLFREHLEPY +PDVY+FNILIRGLCRIG+IDKAFEFFQNMGNFGCFPDIVSYN
Sbjct: 241 LVDEAVLLFREHLEPYLVPDVYSFNILIRGLCRIGKIDKAFEFFQNMGNFGCFPDIVSYN 300

Query: 301 TLINGFCRVNEISKGHDLLKEVQSMKGVSPDVITYTSIISGYCKLGDMQAASELFDEMVS 360
           TLINGFCRVNEISKGHDLLKEV S+KGVSPDV+TYTS+ISGYCKLGDM+AAS+LFDEMVS
Sbjct: 301 TLINGFCRVNEISKGHDLLKEVLSIKGVSPDVVTYTSLISGYCKLGDMKAASDLFDEMVS 360

Query: 361 SGIKPNDFTFNVLIDGFGKAGDMRSALVMYEKMLLLGCTPDVVTITSLIDGYCRAGEVHQ 420
           SGIKPNDFTFNVLIDGFGK G+MRSALVMYEKMLLLGC PDVVT+TSLIDGYCRAGEV+Q
Sbjct: 361 SGIKPNDFTFNVLIDGFGKVGNMRSALVMYEKMLLLGCPPDVVTVTSLIDGYCRAGEVNQ 420

Query: 421 GLKLWEEMIVRDLSPNVYTYAVLINALCKENRIQEARNFLRYLKLSEVVPKPFIYNPVID 480
           GLKLWEEM VR+LSPNVYTYAVLINALCKENRIQEAR+FLR+LK+SEVVPKPFIYNPVID
Sbjct: 421 GLKLWEEMKVRNLSPNVYTYAVLINALCKENRIQEARSFLRHLKVSEVVPKPFIYNPVID 480

Query: 481 GFCKAGKVDEANVIVAEMQEKKCSPDKITFTILIIGNCMKGRMVEAISLFYKMLETNCIP 540
           GFCKAGKVDEANVIVAEMQEKKC PDKITFTILIIGNCMKGRMVEAIS FYKMLE NCIP
Sbjct: 481 GFCKAGKVDEANVIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMLEVNCIP 540

Query: 541 DEITINSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRRKSSCVPVAV 596
           DEITINSLISCLLKAGMPNEASQIKQAA+ENLNLGLLSL SPLT +KSSCVPVAV
Sbjct: 541 DEITINSLISCLLKAGMPNEASQIKQAAVENLNLGLLSLGSPLT-KKSSCVPVAV 594

[Close]

BLAST of Spg003620 vs. NCBI nr
Match: XP_022946631.1 (pentatricopeptide repeat-containing protein At2g06000 isoform X1 [Cucurbita moschata])

HSP 1 Score: 1101.7 bits (2848), Expect = 0.0e+00
Identity = 541/595 (90.92%), Postives = 565/595 (94.96%), Query Frame = 0


Query: 1   MKSREWKQESDAQSERPNRIPGCKRTRIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRF 60
           MKSREWKQES  QSE PNRIPGCKR RIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRF
Sbjct: 1   MKSREWKQESVTQSEGPNRIPGCKRARIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRF 60

Query: 61  RASNFSIAQFYSFADGVSRARPFYDREVIRNPEAWLVKVVCTLFFRSHSSNACFGYLSRN 120
           RASNF IAQFYS ADGVSRARPF DREVIRNPEAWLVKVVCTLFFRSHS NACFGYLSRN
Sbjct: 61  RASNFFIAQFYSIADGVSRARPFCDREVIRNPEAWLVKVVCTLFFRSHSINACFGYLSRN 120

Query: 121 LNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLLRNLCQMGLHDSAKIVFD 180
           LNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLL+RNLCQMGL+DSAK VFD
Sbjct: 121 LNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLVRNLCQMGLNDSAKTVFD 180

Query: 181 CMRSDGIFPDSSIVELLVSSSAQMGKIDSAKKFLDEVHCYGIKVSPFVYNNLLNMLVKQN 240
           CMR+DGI PDSSIVE+LVSS A++GK+D+AK FLDE+HCYGIKVSPFVYNN LNMLVKQN
Sbjct: 181 CMRTDGILPDSSIVEILVSSYARLGKLDAAKNFLDEIHCYGIKVSPFVYNNFLNMLVKQN 240

Query: 241 QVDEAVLLFREHLEPYFIPDVYTFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYN 300
           QVDEAVLLFREHLEPYF PDVYTFNILIRGLCRIGE DKAFE+ QNM NFGCFPDIVSYN
Sbjct: 241 QVDEAVLLFREHLEPYFTPDVYTFNILIRGLCRIGETDKAFEYLQNMENFGCFPDIVSYN 300

Query: 301 TLINGFCRVNEISKGHDLLKEVQSMKGVSPDVITYTSIISGYCKLGDMQAASELFDEMVS 360
           TLINGFCRVNE+SKGH LLKEVQS+KGVSPDVITYTSIISGYCKLGDM+AASELFDEMVS
Sbjct: 301 TLINGFCRVNEVSKGHVLLKEVQSIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVS 360

Query: 361 SGIKPNDFTFNVLIDGFGKAGDMRSALVMYEKMLLLGCTPDVVTITSLIDGYCRAGEVHQ 420
           SGIKPNDFTFNVLIDGFGKAG+MR AL MYEKMLLLGC PDVVT+TSLIDGYCRAGEV+Q
Sbjct: 361 SGIKPNDFTFNVLIDGFGKAGEMRLALAMYEKMLLLGCLPDVVTVTSLIDGYCRAGEVNQ 420

Query: 421 GLKLWEEMIVRDLSPNVYTYAVLINALCKENRIQEARNFLRYLKLSEVVPKPFIYNPVID 480
           GLKLWEEM VRDLSPNVYTYAVLINALCKENRIQEARNFLR+LK SE+VPKPFIYNPVID
Sbjct: 421 GLKLWEEMKVRDLSPNVYTYAVLINALCKENRIQEARNFLRHLKSSEIVPKPFIYNPVID 480

Query: 481 GFCKAGKVDEANVIVAEMQEKKCSPDKITFTILIIGNCMKGRMVEAISLFYKMLETNCIP 540
           GFCKAGKVDEANVIVAEMQEKKC PDKITFTILIIGNCMKGRMVEAI++FYKMLET CIP
Sbjct: 481 GFCKAGKVDEANVIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAINIFYKMLETKCIP 540

Query: 541 DEITINSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRRKSSCVPVAV 596
           DEITINSLISCLLKAG P+EASQIKQAA ENLN  LLSL++PLT RKSSCVPVA+
Sbjct: 541 DEITINSLISCLLKAGRPDEASQIKQAAFENLNFDLLSLKNPLT-RKSSCVPVAI 594

[Close]

BLAST of Spg003620 vs. NCBI nr
Match: XP_022999210.1 (pentatricopeptide repeat-containing protein At2g06000 isoform X1 [Cucurbita maxima])

HSP 1 Score: 1093.6 bits (2827), Expect = 0.0e+00
Identity = 539/595 (90.59%), Postives = 564/595 (94.79%), Query Frame = 0


Query: 1   MKSREWKQESDAQSERPNRIPGCKRTRIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRF 60
           MKSRE KQES  QSE PNRIPGCKR RIVIENIWEDRAEPSDGVGLQMTLLFFSSRA RF
Sbjct: 1   MKSRELKQESVTQSEGPNRIPGCKRARIVIENIWEDRAEPSDGVGLQMTLLFFSSRACRF 60

Query: 61  RASNFSIAQFYSFADGVSRARPFYDREVIRNPEAWLVKVVCTLFFRSHSSNACFGYLSRN 120
           RASNF IAQFYS ADGVSRARPF DREVIRNPE+WLVKVVCTLFFRSHS NACFGYLSRN
Sbjct: 61  RASNFFIAQFYSIADGVSRARPFCDREVIRNPESWLVKVVCTLFFRSHSLNACFGYLSRN 120

Query: 121 LNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLLRNLCQMGLHDSAKIVFD 180
           LNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLL+RNLCQMGL+DSAK VFD
Sbjct: 121 LNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLVRNLCQMGLNDSAKTVFD 180

Query: 181 CMRSDGIFPDSSIVELLVSSSAQMGKIDSAKKFLDEVHCYGIKVSPFVYNNLLNMLVKQN 240
           CMR+DGI PDSSIVE+LVSS AQ+GK+D+AK FLDE+HCYGIKV PFVYNN LNMLVKQN
Sbjct: 181 CMRTDGILPDSSIVEILVSSYAQLGKLDAAKNFLDEIHCYGIKVIPFVYNNFLNMLVKQN 240

Query: 241 QVDEAVLLFREHLEPYFIPDVYTFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYN 300
           QVDEAVLLFREHLEPYF PDVYTFNILIRGLCRIGE DKAFE+ QNM NFGCFPDIVSYN
Sbjct: 241 QVDEAVLLFREHLEPYFTPDVYTFNILIRGLCRIGETDKAFEYLQNMENFGCFPDIVSYN 300

Query: 301 TLINGFCRVNEISKGHDLLKEVQSMKGVSPDVITYTSIISGYCKLGDMQAASELFDEMVS 360
           TLINGFCRVNE+SKGHDLLKEVQS+KGVSPDVITYTSIISGYCKLGDM+AASELFDEMVS
Sbjct: 301 TLINGFCRVNEVSKGHDLLKEVQSIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVS 360

Query: 361 SGIKPNDFTFNVLIDGFGKAGDMRSALVMYEKMLLLGCTPDVVTITSLIDGYCRAGEVHQ 420
           SGIKPNDFTFNVLIDGFGKAG+MR AL MY+KMLLLGC PDVVT+TSLIDGYCRAGEV+Q
Sbjct: 361 SGIKPNDFTFNVLIDGFGKAGEMRLALAMYDKMLLLGCLPDVVTVTSLIDGYCRAGEVNQ 420

Query: 421 GLKLWEEMIVRDLSPNVYTYAVLINALCKENRIQEARNFLRYLKLSEVVPKPFIYNPVID 480
           GLKLWEEM VRDLSPNVYTYAVLINALCKENRIQEARNFLR+LKLSE+VPKPFIYNPVID
Sbjct: 421 GLKLWEEMKVRDLSPNVYTYAVLINALCKENRIQEARNFLRHLKLSEIVPKPFIYNPVID 480

Query: 481 GFCKAGKVDEANVIVAEMQEKKCSPDKITFTILIIGNCMKGRMVEAISLFYKMLETNCIP 540
           GFCKAGKVDEANVIVAEMQEKKC PDKITFTILIIGNCMKGRMVEAI++FYKMLET CIP
Sbjct: 481 GFCKAGKVDEANVIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAINIFYKMLETKCIP 540

Query: 541 DEITINSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRRKSSCVPVAV 596
           DEITINSLISCLLKAGMP+EASQIKQAALE LN  LLSL++PLT  KSSCVPVA+
Sbjct: 541 DEITINSLISCLLKAGMPDEASQIKQAALEYLNFDLLSLKNPLT-IKSSCVPVAI 594

[Close]

BLAST of Spg003620 vs. ExPASy Swiss-Prot
Match: Q9ZUE9 (Pentatricopeptide repeat-containing protein At2g06000 OS=Arabidopsis thaliana OX=3702 GN=At2g06000 PE=2 SV=1)

HSP 1 Score: 569.7 bits (1467), Expect = 3.9e-161
Identity = 282/520 (54.23%), Postives = 379/520 (72.88%), Query Frame = 0


Query: 66  SIAQFYSFADGVSRARPFYD--REVIRNPEAWLVKVVCTLF-FRSHSSNACFGYLSRNLN 125
           +IA F++ + G ++ARP  +  REVI  PEAWLVK+V TLF +R   S+ CF YLS+NLN
Sbjct: 9   AIAHFHTHSHGGAQARPLQNNTREVIHCPEAWLVKIVSTLFVYRVPDSDLCFCYLSKNLN 68

Query: 126 PSIAFEVIKRF-RDPLLGLKFFEFSRTHLSINHTFNTYDLLLRNLCQMGLHDSAKIVFDC 185
           P I+FEV+K+   +P +G +F+EFSR  L+I H+F TY+LL R+LC+ GLHD A  +F+C
Sbjct: 69  PFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFEC 128

Query: 186 MRSDGIFPDSSIVELLVSSSAQMGKIDSAKKFLDEVHCYGIKVSPFVYNNLLNMLVKQNQ 245
           M+SDG+ P++ ++  LVSS A+ GK+  A   L  +  + ++    V N+LLN LVK ++
Sbjct: 129 MKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVKLDR 188

Query: 246 VDEAVLLFREHLEPYFIPDVYTFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNT 305
           V++A+ LF EHL      D  TFNILIRGLC +G+ +KA E    M  FGC PDIV+YNT
Sbjct: 189 VEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNT 248

Query: 306 LINGFCRVNEISKGHDLLKEVQSMKGVSPDVITYTSIISGYCKLGDMQAASELFDEMVSS 365
           LI GFC+ NE++K  ++ K+V+S    SPDV+TYTS+ISGYCK G M+ AS L D+M+  
Sbjct: 249 LIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRL 308

Query: 366 GIKPNDFTFNVLIDGFGKAGDMRSALVMYEKMLLLGCTPDVVTITSLIDGYCRAGEVHQG 425
           GI P + TFNVL+DG+ KAG+M +A  +  KM+  GC PDVVT TSLIDGYCR G+V QG
Sbjct: 309 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQG 368

Query: 426 LKLWEEMIVRDLSPNVYTYAVLINALCKENRIQEARNFLRYLKLSEVVPKPFIYNPVIDG 485
            +LWEEM  R + PN +TY++LINALC ENR+ +AR  L  L   +++P+PF+YNPVIDG
Sbjct: 369 FRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDG 428

Query: 486 FCKAGKVDEANVIVAEMQEKKCSPDKITFTILIIGNCMKGRMVEAISLFYKMLETNCIPD 545
           FCKAGKV+EANVIV EM++KKC PDKITFTILIIG+CMKGRM EA+S+F+KM+   C PD
Sbjct: 429 FCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPD 488

Query: 546 EITINSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRS 582
           +IT++SL+SCLLKAGM  EA  + Q A +  +  ++ L +
Sbjct: 489 KITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVPLET 526

[Close]

BLAST of Spg003620 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 4.5e-69
Identity = 155/480 (32.29%), Postives = 257/480 (53.54%), Query Frame = 0


Query: 116 YLSRNLNPSIAFE-VIKRFRDPLLGLKFFEFSRTH--------------LSINHTFNTYD 175
           +LS N  P  A   ++K   D  L LKF  ++  H              L+    + T  
Sbjct: 41  HLSANFTPEAASNLLLKSQNDQALILKFLNWANPHQFFTLRCKCITLHILTKFKLYKTAQ 100

Query: 176 LLLRNLCQMGLHDS-AKIVFDCMRS--DGIFPDSSIVELLVSSSAQMGKIDSAKKFLDEV 235
           +L  ++    L D  A +VF  ++   D  +  SS+ +L+V S +++  ID A   +   
Sbjct: 101 ILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLA 160

Query: 236 HCYGIKVSPFVYNNLLNMLVK-QNQVDEAVLLFREHLEPYFIPDVYTFNILIRGLCRIGE 295
             +G       YN +L+  ++ +  +  A  +F+E LE    P+V+T+NILIRG C  G 
Sbjct: 161 QAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGN 220

Query: 296 IDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEVQSMKGVSPDVITYT 355
           ID A   F  M   GC P++V+YNTLI+G+C++ +I  G  LL+ + ++KG+ P++I+Y 
Sbjct: 221 IDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSM-ALKGLEPNLISYN 280

Query: 356 SIISGYCKLGDMQAASELFDEMVSSGIKPNDFTFNVLIDGFGKAGDMRSALVMYEKMLLL 415
            +I+G C+ G M+  S +  EM   G   ++ T+N LI G+ K G+   ALVM+ +ML  
Sbjct: 281 VVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRH 340

Query: 416 GCTPDVVTITSLIDGYCRAGEVHQGLKLWEEMIVRDLSPNVYTYAVLINALCKENRIQEA 475
           G TP V+T TSLI   C+AG +++ ++  ++M VR L PN  TY  L++   ++  + EA
Sbjct: 341 GLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA 400

Query: 476 RNFLRYLKLSEVVPKPFIYNPVIDGFCKAGKVDEANVIVAEMQEKKCSPDKITFTILIIG 535
              LR +  +   P    YN +I+G C  GK+++A  ++ +M+EK  SPD ++++ ++ G
Sbjct: 401 YRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG 460

Query: 536 NCMKGRMVEAISLFYKMLETNCIPDEITINSLISCLLKAGMPNEASQIKQAALENLNLGL 577
            C    + EA+ +  +M+E    PD IT +SLI    +     EA  + +   E L +GL
Sbjct: 461 FCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYE---EMLRVGL 516

[Close]

BLAST of Spg003620 vs. ExPASy Swiss-Prot
Match: Q9LSL9 (Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX=3702 GN=At5g65560 PE=2 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 4.6e-61
Identity = 138/399 (34.59%), Postives = 215/399 (53.88%), Query Frame = 0


Query: 158 TYDLLLRNLCQMGLHDSAKIVFDCMRSDGIFPDSSIVELLVSSSAQMGKIDSAKKFLDEV 217
           TY+ ++   C++G  + A      +   G+ PD      L+    Q   +DSA K  +E+
Sbjct: 220 TYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEM 279

Query: 218 HCYGIKVSPFVYNNLLNMLVKQNQVDEAVLLFREHLEPYFIPDVYTFNILIRGLCRIGEI 277
              G + +   Y +L++ L    ++DEA+ LF +  +    P V T+ +LI+ LC     
Sbjct: 280 PLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERK 339

Query: 278 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEVQSMKGVSPDVITYTS 337
            +A    + M   G  P+I +Y  LI+  C   +  K  +LL ++   KG+ P+VITY +
Sbjct: 340 SEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLE-KGLMPNVITYNA 399

Query: 338 IISGYCKLGDMQAASELFDEMVSSGIKPNDFTFNVLIDGFGKAGDMRSALVMYEKMLLLG 397
           +I+GYCK G ++ A ++ + M S  + PN  T+N LI G+ K+ ++  A+ +  KML   
Sbjct: 400 LINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERK 459

Query: 398 CTPDVVTITSLIDGYCRAGEVHQGLKLWEEMIVRDLSPNVYTYAVLINALCKENRIQEAR 457
             PDVVT  SLIDG CR+G      +L   M  R L P+ +TY  +I++LCK  R++EA 
Sbjct: 460 VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEAC 519

Query: 458 NFLRYLKLSEVVPKPFIYNPVIDGFCKAGKVDEANVIVAEMQEKKCSPDKITFTILIIGN 517
           +    L+   V P   +Y  +IDG+CKAGKVDEA++++ +M  K C P+ +TF  LI G 
Sbjct: 520 DLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGL 579

Query: 518 CMKGRMVEAISLFYKMLETNCIPDEITINSLISCLLKAG 557
           C  G++ EA  L  KM++    P   T   LI  LLK G
Sbjct: 580 CADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDG 616

[Close]

BLAST of Spg003620 vs. ExPASy Swiss-Prot
Match: Q0WKV3 (Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12300 PE=2 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 1.7e-60
Identity = 142/433 (32.79%), Postives = 209/433 (48.27%), Query Frame = 0


Query: 158 TYDLLLRNLCQMGLHDSAKIVFDCMRSDGIFPDSSIVELLVSSSAQMGKIDSAKKFLDEV 217
           T+  L+  LC  G    A  + D M   G  PD   +  LV+     GK   A   +D++
Sbjct: 160 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKM 219

Query: 218 HCYGIKVSPFVYNNLLNMLVKQNQVDEAVLLFREHLEPYFIPDVYTFNILIRGLCRIGEI 277
             YG + +   Y  +LN++ K  Q   A+ L R+  E     D   ++I+I GLC+ G +
Sbjct: 220 VEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSL 279

Query: 278 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEVQSMK----------- 337
           D AF  F  M   G   +I++YN LI GFC       G  LL+++   K           
Sbjct: 280 DNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVL 339

Query: 338 -----------------------GVSPDVITYTSIISGYCKLGDMQAASELFDEMVSSGI 397
                                  G++PD ITYTS+I G+CK   +  A+++ D MVS G 
Sbjct: 340 IDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGC 399

Query: 398 KPNDFTFNVLIDGFGKAGDMRSALVMYEKMLLLGCTPDVVTITSLIDGYCRAGEVHQGLK 457
            PN  TFN+LI+G+ KA  +   L ++ KM L G   D VT  +LI G+C  G+++   +
Sbjct: 400 DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKE 459

Query: 458 LWEEMIVRDLSPNVYTYAVLINALCKENRIQEARNFLRYLKLSEVVPKPFIYNPVIDGFC 517
           L++EM+ R + PN+ TY +L++ LC     ++A      ++ S++     IYN +I G C
Sbjct: 460 LFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMC 519

Query: 518 KAGKVDEANVIVAEMQEKKCSPDKITFTILIIGNCMKGRMVEAISLFYKMLETNCIPDEI 557
            A KVD+A  +   +  K   P   T+ I+I G C KG + EA  LF KM E    PD  
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGW 579

[Close]

BLAST of Spg003620 vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 6.6e-60
Identity = 133/440 (30.23%), Postives = 233/440 (52.95%), Query Frame = 0


Query: 140 LKFFEFSRTHLS---INHTFNTYDLLLRNLCQMGLHDSAKIVFDCMRSDGIFPDSSIVEL 199
           LK  E S   +S   I    +T+++L++ LC+      A ++ + M S G+ PD      
Sbjct: 170 LKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTT 229

Query: 200 LVSSSAQMGKIDSAKKFLDEVHCYGIKVSPFVYNNLLNMLVKQNQVDEAVLLFRE-HLEP 259
           ++    + G +D A +  +++  +G   S    N +++   K+ +V++A+   +E   + 
Sbjct: 230 VMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQD 289

Query: 260 YFIPDVYTFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKG 319
            F PD YTFN L+ GLC+ G +  A E    M   G  PD+ +YN++I+G C++ E+ + 
Sbjct: 290 GFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEA 349

Query: 320 HDLLKEVQSMKGVSPDVITYTSIISGYCKLGDMQAASELFDEMVSSGIKPNDFTFNVLID 379
            ++L ++ + +  SP+ +TY ++IS  CK   ++ A+EL   + S GI P+  TFN LI 
Sbjct: 350 VEVLDQMIT-RDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQ 409

Query: 380 GFGKAGDMRSALVMYEKMLLLGCTPDVVTITSLIDGYCRAGEVHQGLKLWEEMIVRDLSP 439
           G     + R A+ ++E+M   GC PD  T   LID  C  G++ + L + ++M +   + 
Sbjct: 410 GLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCAR 469

Query: 440 NVYTYAVLINALCKENRIQEARNFLRYLKLSEVVPKPFIYNPVIDGFCKAGKVDEANVIV 499
           +V TY  LI+  CK N+ +EA      +++  V      YN +IDG CK+ +V++A  ++
Sbjct: 470 SVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLM 529

Query: 500 AEMQEKKCSPDKITFTILIIGNCMKGRMVEAISLFYKMLETNCIPDEITINSLISCLLKA 559
            +M  +   PDK T+  L+   C  G + +A  +   M    C PD +T  +LIS L KA
Sbjct: 530 DQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKA 589

Query: 560 GMPNEASQ-IKQAALENLNL 575
           G    AS+ ++   ++ +NL
Sbjct: 590 GRVEVASKLLRSIQMKGINL 608

[Close]

BLAST of Spg003620 vs. ExPASy TrEMBL
Match: A0A6J1G470 (pentatricopeptide repeat-containing protein At2g06000 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450639 PE=4 SV=1)

HSP 1 Score: 1101.7 bits (2848), Expect = 0.0e+00
Identity = 541/595 (90.92%), Postives = 565/595 (94.96%), Query Frame = 0


Query: 1   MKSREWKQESDAQSERPNRIPGCKRTRIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRF 60
           MKSREWKQES  QSE PNRIPGCKR RIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRF
Sbjct: 1   MKSREWKQESVTQSEGPNRIPGCKRARIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRF 60

Query: 61  RASNFSIAQFYSFADGVSRARPFYDREVIRNPEAWLVKVVCTLFFRSHSSNACFGYLSRN 120
           RASNF IAQFYS ADGVSRARPF DREVIRNPEAWLVKVVCTLFFRSHS NACFGYLSRN
Sbjct: 61  RASNFFIAQFYSIADGVSRARPFCDREVIRNPEAWLVKVVCTLFFRSHSINACFGYLSRN 120

Query: 121 LNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLLRNLCQMGLHDSAKIVFD 180
           LNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLL+RNLCQMGL+DSAK VFD
Sbjct: 121 LNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLVRNLCQMGLNDSAKTVFD 180

Query: 181 CMRSDGIFPDSSIVELLVSSSAQMGKIDSAKKFLDEVHCYGIKVSPFVYNNLLNMLVKQN 240
           CMR+DGI PDSSIVE+LVSS A++GK+D+AK FLDE+HCYGIKVSPFVYNN LNMLVKQN
Sbjct: 181 CMRTDGILPDSSIVEILVSSYARLGKLDAAKNFLDEIHCYGIKVSPFVYNNFLNMLVKQN 240

Query: 241 QVDEAVLLFREHLEPYFIPDVYTFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYN 300
           QVDEAVLLFREHLEPYF PDVYTFNILIRGLCRIGE DKAFE+ QNM NFGCFPDIVSYN
Sbjct: 241 QVDEAVLLFREHLEPYFTPDVYTFNILIRGLCRIGETDKAFEYLQNMENFGCFPDIVSYN 300

Query: 301 TLINGFCRVNEISKGHDLLKEVQSMKGVSPDVITYTSIISGYCKLGDMQAASELFDEMVS 360
           TLINGFCRVNE+SKGH LLKEVQS+KGVSPDVITYTSIISGYCKLGDM+AASELFDEMVS
Sbjct: 301 TLINGFCRVNEVSKGHVLLKEVQSIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVS 360

Query: 361 SGIKPNDFTFNVLIDGFGKAGDMRSALVMYEKMLLLGCTPDVVTITSLIDGYCRAGEVHQ 420
           SGIKPNDFTFNVLIDGFGKAG+MR AL MYEKMLLLGC PDVVT+TSLIDGYCRAGEV+Q
Sbjct: 361 SGIKPNDFTFNVLIDGFGKAGEMRLALAMYEKMLLLGCLPDVVTVTSLIDGYCRAGEVNQ 420

Query: 421 GLKLWEEMIVRDLSPNVYTYAVLINALCKENRIQEARNFLRYLKLSEVVPKPFIYNPVID 480
           GLKLWEEM VRDLSPNVYTYAVLINALCKENRIQEARNFLR+LK SE+VPKPFIYNPVID
Sbjct: 421 GLKLWEEMKVRDLSPNVYTYAVLINALCKENRIQEARNFLRHLKSSEIVPKPFIYNPVID 480

Query: 481 GFCKAGKVDEANVIVAEMQEKKCSPDKITFTILIIGNCMKGRMVEAISLFYKMLETNCIP 540
           GFCKAGKVDEANVIVAEMQEKKC PDKITFTILIIGNCMKGRMVEAI++FYKMLET CIP
Sbjct: 481 GFCKAGKVDEANVIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAINIFYKMLETKCIP 540

Query: 541 DEITINSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRRKSSCVPVAV 596
           DEITINSLISCLLKAG P+EASQIKQAA ENLN  LLSL++PLT RKSSCVPVA+
Sbjct: 541 DEITINSLISCLLKAGRPDEASQIKQAAFENLNFDLLSLKNPLT-RKSSCVPVAI 594

[Close]

BLAST of Spg003620 vs. ExPASy TrEMBL
Match: A0A6J1KES2 (pentatricopeptide repeat-containing protein At2g06000 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493657 PE=4 SV=1)

HSP 1 Score: 1093.6 bits (2827), Expect = 0.0e+00
Identity = 539/595 (90.59%), Postives = 564/595 (94.79%), Query Frame = 0


Query: 1   MKSREWKQESDAQSERPNRIPGCKRTRIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRF 60
           MKSRE KQES  QSE PNRIPGCKR RIVIENIWEDRAEPSDGVGLQMTLLFFSSRA RF
Sbjct: 1   MKSRELKQESVTQSEGPNRIPGCKRARIVIENIWEDRAEPSDGVGLQMTLLFFSSRACRF 60

Query: 61  RASNFSIAQFYSFADGVSRARPFYDREVIRNPEAWLVKVVCTLFFRSHSSNACFGYLSRN 120
           RASNF IAQFYS ADGVSRARPF DREVIRNPE+WLVKVVCTLFFRSHS NACFGYLSRN
Sbjct: 61  RASNFFIAQFYSIADGVSRARPFCDREVIRNPESWLVKVVCTLFFRSHSLNACFGYLSRN 120

Query: 121 LNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLLRNLCQMGLHDSAKIVFD 180
           LNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLL+RNLCQMGL+DSAK VFD
Sbjct: 121 LNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLVRNLCQMGLNDSAKTVFD 180

Query: 181 CMRSDGIFPDSSIVELLVSSSAQMGKIDSAKKFLDEVHCYGIKVSPFVYNNLLNMLVKQN 240
           CMR+DGI PDSSIVE+LVSS AQ+GK+D+AK FLDE+HCYGIKV PFVYNN LNMLVKQN
Sbjct: 181 CMRTDGILPDSSIVEILVSSYAQLGKLDAAKNFLDEIHCYGIKVIPFVYNNFLNMLVKQN 240

Query: 241 QVDEAVLLFREHLEPYFIPDVYTFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYN 300
           QVDEAVLLFREHLEPYF PDVYTFNILIRGLCRIGE DKAFE+ QNM NFGCFPDIVSYN
Sbjct: 241 QVDEAVLLFREHLEPYFTPDVYTFNILIRGLCRIGETDKAFEYLQNMENFGCFPDIVSYN 300

Query: 301 TLINGFCRVNEISKGHDLLKEVQSMKGVSPDVITYTSIISGYCKLGDMQAASELFDEMVS 360
           TLINGFCRVNE+SKGHDLLKEVQS+KGVSPDVITYTSIISGYCKLGDM+AASELFDEMVS
Sbjct: 301 TLINGFCRVNEVSKGHDLLKEVQSIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVS 360

Query: 361 SGIKPNDFTFNVLIDGFGKAGDMRSALVMYEKMLLLGCTPDVVTITSLIDGYCRAGEVHQ 420
           SGIKPNDFTFNVLIDGFGKAG+MR AL MY+KMLLLGC PDVVT+TSLIDGYCRAGEV+Q
Sbjct: 361 SGIKPNDFTFNVLIDGFGKAGEMRLALAMYDKMLLLGCLPDVVTVTSLIDGYCRAGEVNQ 420

Query: 421 GLKLWEEMIVRDLSPNVYTYAVLINALCKENRIQEARNFLRYLKLSEVVPKPFIYNPVID 480
           GLKLWEEM VRDLSPNVYTYAVLINALCKENRIQEARNFLR+LKLSE+VPKPFIYNPVID
Sbjct: 421 GLKLWEEMKVRDLSPNVYTYAVLINALCKENRIQEARNFLRHLKLSEIVPKPFIYNPVID 480

Query: 481 GFCKAGKVDEANVIVAEMQEKKCSPDKITFTILIIGNCMKGRMVEAISLFYKMLETNCIP 540
           GFCKAGKVDEANVIVAEMQEKKC PDKITFTILIIGNCMKGRMVEAI++FYKMLET CIP
Sbjct: 481 GFCKAGKVDEANVIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAINIFYKMLETKCIP 540

Query: 541 DEITINSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRRKSSCVPVAV 596
           DEITINSLISCLLKAGMP+EASQIKQAALE LN  LLSL++PLT  KSSCVPVA+
Sbjct: 541 DEITINSLISCLLKAGMPDEASQIKQAALEYLNFDLLSLKNPLT-IKSSCVPVAI 594

[Close]

BLAST of Spg003620 vs. ExPASy TrEMBL
Match: A0A6J1DMW0 (pentatricopeptide repeat-containing protein At2g06000 OS=Momordica charantia OX=3673 GN=LOC111021880 PE=4 SV=1)

HSP 1 Score: 1090.5 bits (2819), Expect = 0.0e+00
Identity = 536/595 (90.08%), Postives = 563/595 (94.62%), Query Frame = 0


Query: 1   MKSREWKQESDAQSERPNRIPGCKRTRIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRF 60
           MKSREW+QESD QSERP+RIPGCKRTRIVIEN+WEDRAE SDGVGLQMTLLFFSSRAYRF
Sbjct: 1   MKSREWEQESDTQSERPDRIPGCKRTRIVIENLWEDRAESSDGVGLQMTLLFFSSRAYRF 60

Query: 61  RASNFSIAQFYSFADGVSRARPFYDREVIRNPEAWLVKVVCTLFFRSHSSNACFGYLSRN 120
           RAS+FSIAQF+SF DG SRAR FYDREVIRNPEAWL KVVCTLFFRSHS N CFGYLSRN
Sbjct: 61  RASSFSIAQFHSFTDGGSRARSFYDREVIRNPEAWLAKVVCTLFFRSHSLNGCFGYLSRN 120

Query: 121 LNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLLRNLCQMGLHDSAKIVFD 180
           L PSIAFEVIKRF+DP+LGLKFFEFSR HLSINH+FNTYDLL+RNLCQMGLH SAK+VFD
Sbjct: 121 LTPSIAFEVIKRFKDPILGLKFFEFSRAHLSINHSFNTYDLLMRNLCQMGLHGSAKMVFD 180

Query: 181 CMRSDGIFPDSSIVELLVSSSAQMGKIDSAKKFLDEVHCYGIKVSPFVYNNLLNMLVKQN 240
           CMR DGI PDSS+VELLVSS AQMGK+DSAK FL+EVHCYGIKVSPFVYNNLLN+LVKQN
Sbjct: 181 CMRCDGILPDSSVVELLVSSYAQMGKLDSAKIFLNEVHCYGIKVSPFVYNNLLNLLVKQN 240

Query: 241 QVDEAVLLFREHLEPYFIPDVYTFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYN 300
           QVDEAVLLFREHLEPYFIPD YTFNI+IRGLCRIGEI KAFEFFQNMGNFGCFPDIVSYN
Sbjct: 241 QVDEAVLLFREHLEPYFIPDAYTFNIIIRGLCRIGEIHKAFEFFQNMGNFGCFPDIVSYN 300

Query: 301 TLINGFCRVNEISKGHDLLKEVQSMKGVSPDVITYTSIISGYCKLGDMQAASELFDEMVS 360
           TLINGFCRVNEISKGHDLLKEVQS+KGV+PDVITYTSIISGYCKLGDM+AAS L DEMV 
Sbjct: 301 TLINGFCRVNEISKGHDLLKEVQSVKGVAPDVITYTSIISGYCKLGDMKAASGLLDEMVG 360

Query: 361 SGIKPNDFTFNVLIDGFGKAGDMRSALVMYEKMLLLGCTPDVVTITSLIDGYCRAGEVHQ 420
           SGIKPNDFTFNVLI GFGK GDM SAL MYEKMLLLGC PDVVT+TSLIDGYCRAGEV+Q
Sbjct: 361 SGIKPNDFTFNVLIHGFGKVGDMISALAMYEKMLLLGCPPDVVTLTSLIDGYCRAGEVNQ 420

Query: 421 GLKLWEEMIVRDLSPNVYTYAVLINALCKENRIQEARNFLRYLKLSEVVPKPFIYNPVID 480
           GLKLWEEM VR LSPNVYTYAVLINALCKENRIQEAR FLR+LKLSEVVPK FIYNPVID
Sbjct: 421 GLKLWEEMKVRGLSPNVYTYAVLINALCKENRIQEARFFLRHLKLSEVVPKTFIYNPVID 480

Query: 481 GFCKAGKVDEANVIVAEMQEKKCSPDKITFTILIIGNCMKGRMVEAISLFYKMLETNCIP 540
           GFCKAGKVDEANVIVAEM+EKKCSPDKITFTILIIGNCM+GRMVEAIS+FYKMLETNCIP
Sbjct: 481 GFCKAGKVDEANVIVAEMREKKCSPDKITFTILIIGNCMQGRMVEAISIFYKMLETNCIP 540

Query: 541 DEITINSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRRKSSCVPVAV 596
           DEITINSLISCLLKAGMPNEASQIKQAA+ENLNLGLLSLR+PL  RK SCVP+AV
Sbjct: 541 DEITINSLISCLLKAGMPNEASQIKQAAVENLNLGLLSLRNPLV-RKPSCVPIAV 594

[Close]

BLAST of Spg003620 vs. ExPASy TrEMBL
Match: A0A1S3CB42 (pentatricopeptide repeat-containing protein At2g06000 OS=Cucumis melo OX=3656 GN=LOC103498823 PE=4 SV=1)

HSP 1 Score: 1043.9 bits (2698), Expect = 2.6e-301
Identity = 520/588 (88.44%), Postives = 548/588 (93.20%), Query Frame = 0


Query: 8   QESDAQSERPNRIPGCKRTRIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRFRASNFSI 67
           +ES+ QSERP     CK+ RIVIENIWEDRAEP+DGVGLQMTLLFFSSRAYR R SNFSI
Sbjct: 4   RESERQSERPT---VCKQERIVIENIWEDRAEPNDGVGLQMTLLFFSSRAYRLRLSNFSI 63

Query: 68  AQFYSFADGVSRARPFYDREVIRNPEAWLVKVVCTLFFRSHSSNACFGYLSRNLNPSIAF 127
           +QFYS AD VSRARPF DRE+IRN EAWLVKVVCTLF RSHS NACFGYLSRNLNPSIAF
Sbjct: 64  SQFYSLADSVSRARPFCDREIIRNSEAWLVKVVCTLFSRSHSLNACFGYLSRNLNPSIAF 123

Query: 128 EVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLLRNLCQMGLHDSAKIVFDCMRSDGI 187
           EVIKRFRDPLLGLKFFEFSR HLSINHTFNTYDLL+RNLC++GL+DSAKIVFDCMRSDGI
Sbjct: 124 EVIKRFRDPLLGLKFFEFSRIHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGI 183

Query: 188 FPDSSIVELLVSSSAQMGKIDSAKKFLDEVHCYGIKVSPFVYNNLLNMLVKQNQVDEAVL 247
            PDSSI+ELLVSS A+MGK DSAK FL+EVHCYGIKVSPFVYNNLLNMLVKQN VDEAV 
Sbjct: 184 LPDSSILELLVSSYARMGKFDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVS 243

Query: 248 LFREHLEPYFIPDVYTFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFC 307
           LFREHLEPYF+PDVY+FNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFC
Sbjct: 244 LFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFC 303

Query: 308 RVNEISKGHDLLKEVQSMKGVSPDVITYTSIISGYCKLGDMQAASELFDEMVSSGIKPND 367
           RVNEISKGHDLLKEV  +KGVSPDVITYTSIISGYCKLGDM+AASELFDEMVSSGIKPN+
Sbjct: 304 RVNEISKGHDLLKEVMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNN 363

Query: 368 FTFNVLIDGFGKAGDMRSALVMYEKMLLLGCTPDVVTITSLIDGYCRAGEVHQGLKLWEE 427
           FTFNVLIDGFGK G+MRSA+VMYEKMLLLGC PDVVT+TSLIDGYCR GEV+QGLKLWEE
Sbjct: 364 FTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCPPDVVTVTSLIDGYCREGEVNQGLKLWEE 423

Query: 428 MIVRDLSPNVYTYAVLINALCKENRIQEARNFLRYLKLSEVVPKPFIYNPVIDGFCKAGK 487
           M +R+LSPNVYTYAVLINALCKENRIQEARNFLR+LK SEVVPKPFIYNPVID FCKAG+
Sbjct: 424 MKLRNLSPNVYTYAVLINALCKENRIQEARNFLRHLKSSEVVPKPFIYNPVIDRFCKAGQ 483

Query: 488 VDEANVIVAEMQEKKCSPDKITFTILIIGNCMKGRMVEAISLFYKMLETNCIPDEITINS 547
           VDEAN IVAEMQEKKC PDKITFTILIIGNCMKGRMVEAIS FYKM+E NCIPDEITINS
Sbjct: 484 VDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCIPDEITINS 543

Query: 548 LISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRRKSSCVPVAV 596
           LISCLLKAGMPNEASQIKQAAL+ LNLG LSL S LT RKSS VPVAV
Sbjct: 544 LISCLLKAGMPNEASQIKQAALQKLNLGSLSLGSLLT-RKSSSVPVAV 587

[Close]

BLAST of Spg003620 vs. ExPASy TrEMBL
Match: A0A5A7V6K1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G001250 PE=4 SV=1)

HSP 1 Score: 1043.9 bits (2698), Expect = 2.6e-301
Identity = 520/588 (88.44%), Postives = 549/588 (93.37%), Query Frame = 0


Query: 8   QESDAQSERPNRIPGCKRTRIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRFRASNFSI 67
           +ES+ QSERP     CK+ RIVIENIWEDRAEP+DGVGLQMTLLFFSSRAYR R SNFSI
Sbjct: 4   RESERQSERPT---VCKQERIVIENIWEDRAEPNDGVGLQMTLLFFSSRAYRLRLSNFSI 63

Query: 68  AQFYSFADGVSRARPFYDREVIRNPEAWLVKVVCTLFFRSHSSNACFGYLSRNLNPSIAF 127
           +QFYS AD VSRARPF DRE+IRN EAWLVKVVCTLF RSHS NACFGYLSRNLNPSIAF
Sbjct: 64  SQFYSLADSVSRARPFCDREIIRNSEAWLVKVVCTLFSRSHSLNACFGYLSRNLNPSIAF 123

Query: 128 EVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLLRNLCQMGLHDSAKIVFDCMRSDGI 187
           EVIKRFRDPLLGLKFFEFSR HLSINHTFNTYDLL+RNLC++GL+DSAKIVFDCMRSDGI
Sbjct: 124 EVIKRFRDPLLGLKFFEFSRIHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGI 183

Query: 188 FPDSSIVELLVSSSAQMGKIDSAKKFLDEVHCYGIKVSPFVYNNLLNMLVKQNQVDEAVL 247
            PDSSI+ELLVSS A+MGK+DSAK FL+EVHCYGIKVSPFVYNNLLNMLVKQN VDEAV 
Sbjct: 184 SPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVS 243

Query: 248 LFREHLEPYFIPDVYTFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFC 307
           LFREHLEPYF+PDVY+FNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFC
Sbjct: 244 LFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFC 303

Query: 308 RVNEISKGHDLLKEVQSMKGVSPDVITYTSIISGYCKLGDMQAASELFDEMVSSGIKPND 367
           RVNEISKGHDLLKEV  +KGVSPDVITYTSIISGYCKLGDM+AASELFDEMVSSGIKPN+
Sbjct: 304 RVNEISKGHDLLKEVMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNN 363

Query: 368 FTFNVLIDGFGKAGDMRSALVMYEKMLLLGCTPDVVTITSLIDGYCRAGEVHQGLKLWEE 427
           FTFNVLIDGFGK G+MRSA+VMYEKMLLLGC PDVVT+TSLIDGYCR GEV+QGLKLWEE
Sbjct: 364 FTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCPPDVVTVTSLIDGYCREGEVNQGLKLWEE 423

Query: 428 MIVRDLSPNVYTYAVLINALCKENRIQEARNFLRYLKLSEVVPKPFIYNPVIDGFCKAGK 487
           M +R+LSPNVYTYAVLINALCKENRIQEARNFLR+LK SEVVPKPFIYNPVID FCKAG+
Sbjct: 424 MKLRNLSPNVYTYAVLINALCKENRIQEARNFLRHLKSSEVVPKPFIYNPVIDRFCKAGQ 483

Query: 488 VDEANVIVAEMQEKKCSPDKITFTILIIGNCMKGRMVEAISLFYKMLETNCIPDEITINS 547
           VDEAN IVAEMQEKKC PDKITFTILIIGNCMKGRMVEAIS FYKM+E NCIPDEITINS
Sbjct: 484 VDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCIPDEITINS 543

Query: 548 LISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRRKSSCVPVAV 596
           LISCLLKAGMPNEASQIKQAAL+ LNLG LSL S LT RKSS VPVAV
Sbjct: 544 LISCLLKAGMPNEASQIKQAALQKLNLGSLSLGSLLT-RKSSSVPVAV 587

[Close]

BLAST of Spg003620 vs. TAIR 10
Match: AT2G06000.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 569.7 bits (1467), Expect = 2.8e-162
Identity = 282/520 (54.23%), Postives = 379/520 (72.88%), Query Frame = 0


Query: 66  SIAQFYSFADGVSRARPFYD--REVIRNPEAWLVKVVCTLF-FRSHSSNACFGYLSRNLN 125
           +IA F++ + G ++ARP  +  REVI  PEAWLVK+V TLF +R   S+ CF YLS+NLN
Sbjct: 9   AIAHFHTHSHGGAQARPLQNNTREVIHCPEAWLVKIVSTLFVYRVPDSDLCFCYLSKNLN 68

Query: 126 PSIAFEVIKRF-RDPLLGLKFFEFSRTHLSINHTFNTYDLLLRNLCQMGLHDSAKIVFDC 185
           P I+FEV+K+   +P +G +F+EFSR  L+I H+F TY+LL R+LC+ GLHD A  +F+C
Sbjct: 69  PFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFEC 128

Query: 186 MRSDGIFPDSSIVELLVSSSAQMGKIDSAKKFLDEVHCYGIKVSPFVYNNLLNMLVKQNQ 245
           M+SDG+ P++ ++  LVSS A+ GK+  A   L  +  + ++    V N+LLN LVK ++
Sbjct: 129 MKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVKLDR 188

Query: 246 VDEAVLLFREHLEPYFIPDVYTFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNT 305
           V++A+ LF EHL      D  TFNILIRGLC +G+ +KA E    M  FGC PDIV+YNT
Sbjct: 189 VEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNT 248

Query: 306 LINGFCRVNEISKGHDLLKEVQSMKGVSPDVITYTSIISGYCKLGDMQAASELFDEMVSS 365
           LI GFC+ NE++K  ++ K+V+S    SPDV+TYTS+ISGYCK G M+ AS L D+M+  
Sbjct: 249 LIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRL 308

Query: 366 GIKPNDFTFNVLIDGFGKAGDMRSALVMYEKMLLLGCTPDVVTITSLIDGYCRAGEVHQG 425
           GI P + TFNVL+DG+ KAG+M +A  +  KM+  GC PDVVT TSLIDGYCR G+V QG
Sbjct: 309 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQG 368

Query: 426 LKLWEEMIVRDLSPNVYTYAVLINALCKENRIQEARNFLRYLKLSEVVPKPFIYNPVIDG 485
            +LWEEM  R + PN +TY++LINALC ENR+ +AR  L  L   +++P+PF+YNPVIDG
Sbjct: 369 FRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDG 428

Query: 486 FCKAGKVDEANVIVAEMQEKKCSPDKITFTILIIGNCMKGRMVEAISLFYKMLETNCIPD 545
           FCKAGKV+EANVIV EM++KKC PDKITFTILIIG+CMKGRM EA+S+F+KM+   C PD
Sbjct: 429 FCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPD 488

Query: 546 EITINSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRS 582
           +IT++SL+SCLLKAGM  EA  + Q A +  +  ++ L +
Sbjct: 489 KITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVPLET 526

[Close]

BLAST of Spg003620 vs. TAIR 10
Match: AT2G06000.2 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 569.7 bits (1467), Expect = 2.8e-162
Identity = 282/520 (54.23%), Postives = 379/520 (72.88%), Query Frame = 0


Query: 66  SIAQFYSFADGVSRARPFYD--REVIRNPEAWLVKVVCTLF-FRSHSSNACFGYLSRNLN 125
           +IA F++ + G ++ARP  +  REVI  PEAWLVK+V TLF +R   S+ CF YLS+NLN
Sbjct: 9   AIAHFHTHSHGGAQARPLQNNTREVIHCPEAWLVKIVSTLFVYRVPDSDLCFCYLSKNLN 68

Query: 126 PSIAFEVIKRF-RDPLLGLKFFEFSRTHLSINHTFNTYDLLLRNLCQMGLHDSAKIVFDC 185
           P I+FEV+K+   +P +G +F+EFSR  L+I H+F TY+LL R+LC+ GLHD A  +F+C
Sbjct: 69  PFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFEC 128

Query: 186 MRSDGIFPDSSIVELLVSSSAQMGKIDSAKKFLDEVHCYGIKVSPFVYNNLLNMLVKQNQ 245
           M+SDG+ P++ ++  LVSS A+ GK+  A   L  +  + ++    V N+LLN LVK ++
Sbjct: 129 MKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVKLDR 188

Query: 246 VDEAVLLFREHLEPYFIPDVYTFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNT 305
           V++A+ LF EHL      D  TFNILIRGLC +G+ +KA E    M  FGC PDIV+YNT
Sbjct: 189 VEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNT 248

Query: 306 LINGFCRVNEISKGHDLLKEVQSMKGVSPDVITYTSIISGYCKLGDMQAASELFDEMVSS 365
           LI GFC+ NE++K  ++ K+V+S    SPDV+TYTS+ISGYCK G M+ AS L D+M+  
Sbjct: 249 LIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRL 308

Query: 366 GIKPNDFTFNVLIDGFGKAGDMRSALVMYEKMLLLGCTPDVVTITSLIDGYCRAGEVHQG 425
           GI P + TFNVL+DG+ KAG+M +A  +  KM+  GC PDVVT TSLIDGYCR G+V QG
Sbjct: 309 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQG 368

Query: 426 LKLWEEMIVRDLSPNVYTYAVLINALCKENRIQEARNFLRYLKLSEVVPKPFIYNPVIDG 485
            +LWEEM  R + PN +TY++LINALC ENR+ +AR  L  L   +++P+PF+YNPVIDG
Sbjct: 369 FRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDG 428

Query: 486 FCKAGKVDEANVIVAEMQEKKCSPDKITFTILIIGNCMKGRMVEAISLFYKMLETNCIPD 545
           FCKAGKV+EANVIV EM++KKC PDKITFTILIIG+CMKGRM EA+S+F+KM+   C PD
Sbjct: 429 FCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPD 488

Query: 546 EITINSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRS 582
           +IT++SL+SCLLKAGM  EA  + Q A +  +  ++ L +
Sbjct: 489 KITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVPLET 526

[Close]

BLAST of Spg003620 vs. TAIR 10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 263.8 bits (673), Expect = 3.2e-70
Identity = 155/480 (32.29%), Postives = 257/480 (53.54%), Query Frame = 0


Query: 116 YLSRNLNPSIAFE-VIKRFRDPLLGLKFFEFSRTH--------------LSINHTFNTYD 175
           +LS N  P  A   ++K   D  L LKF  ++  H              L+    + T  
Sbjct: 41  HLSANFTPEAASNLLLKSQNDQALILKFLNWANPHQFFTLRCKCITLHILTKFKLYKTAQ 100

Query: 176 LLLRNLCQMGLHDS-AKIVFDCMRS--DGIFPDSSIVELLVSSSAQMGKIDSAKKFLDEV 235
           +L  ++    L D  A +VF  ++   D  +  SS+ +L+V S +++  ID A   +   
Sbjct: 101 ILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLA 160

Query: 236 HCYGIKVSPFVYNNLLNMLVK-QNQVDEAVLLFREHLEPYFIPDVYTFNILIRGLCRIGE 295
             +G       YN +L+  ++ +  +  A  +F+E LE    P+V+T+NILIRG C  G 
Sbjct: 161 QAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGN 220

Query: 296 IDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEVQSMKGVSPDVITYT 355
           ID A   F  M   GC P++V+YNTLI+G+C++ +I  G  LL+ + ++KG+ P++I+Y 
Sbjct: 221 IDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSM-ALKGLEPNLISYN 280

Query: 356 SIISGYCKLGDMQAASELFDEMVSSGIKPNDFTFNVLIDGFGKAGDMRSALVMYEKMLLL 415
            +I+G C+ G M+  S +  EM   G   ++ T+N LI G+ K G+   ALVM+ +ML  
Sbjct: 281 VVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRH 340

Query: 416 GCTPDVVTITSLIDGYCRAGEVHQGLKLWEEMIVRDLSPNVYTYAVLINALCKENRIQEA 475
           G TP V+T TSLI   C+AG +++ ++  ++M VR L PN  TY  L++   ++  + EA
Sbjct: 341 GLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA 400

Query: 476 RNFLRYLKLSEVVPKPFIYNPVIDGFCKAGKVDEANVIVAEMQEKKCSPDKITFTILIIG 535
              LR +  +   P    YN +I+G C  GK+++A  ++ +M+EK  SPD ++++ ++ G
Sbjct: 401 YRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG 460

Query: 536 NCMKGRMVEAISLFYKMLETNCIPDEITINSLISCLLKAGMPNEASQIKQAALENLNLGL 577
            C    + EA+ +  +M+E    PD IT +SLI    +     EA  + +   E L +GL
Sbjct: 461 FCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYE---EMLRVGL 516

[Close]

BLAST of Spg003620 vs. TAIR 10
Match: AT5G65560.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 237.3 bits (604), Expect = 3.2e-62
Identity = 138/399 (34.59%), Postives = 215/399 (53.88%), Query Frame = 0


Query: 158 TYDLLLRNLCQMGLHDSAKIVFDCMRSDGIFPDSSIVELLVSSSAQMGKIDSAKKFLDEV 217
           TY+ ++   C++G  + A      +   G+ PD      L+    Q   +DSA K  +E+
Sbjct: 220 TYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEM 279

Query: 218 HCYGIKVSPFVYNNLLNMLVKQNQVDEAVLLFREHLEPYFIPDVYTFNILIRGLCRIGEI 277
              G + +   Y +L++ L    ++DEA+ LF +  +    P V T+ +LI+ LC     
Sbjct: 280 PLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERK 339

Query: 278 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEVQSMKGVSPDVITYTS 337
            +A    + M   G  P+I +Y  LI+  C   +  K  +LL ++   KG+ P+VITY +
Sbjct: 340 SEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLE-KGLMPNVITYNA 399

Query: 338 IISGYCKLGDMQAASELFDEMVSSGIKPNDFTFNVLIDGFGKAGDMRSALVMYEKMLLLG 397
           +I+GYCK G ++ A ++ + M S  + PN  T+N LI G+ K+ ++  A+ +  KML   
Sbjct: 400 LINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERK 459

Query: 398 CTPDVVTITSLIDGYCRAGEVHQGLKLWEEMIVRDLSPNVYTYAVLINALCKENRIQEAR 457
             PDVVT  SLIDG CR+G      +L   M  R L P+ +TY  +I++LCK  R++EA 
Sbjct: 460 VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEAC 519

Query: 458 NFLRYLKLSEVVPKPFIYNPVIDGFCKAGKVDEANVIVAEMQEKKCSPDKITFTILIIGN 517
           +    L+   V P   +Y  +IDG+CKAGKVDEA++++ +M  K C P+ +TF  LI G 
Sbjct: 520 DLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGL 579

Query: 518 CMKGRMVEAISLFYKMLETNCIPDEITINSLISCLLKAG 557
           C  G++ EA  L  KM++    P   T   LI  LLK G
Sbjct: 580 CADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDG 616

[Close]

BLAST of Spg003620 vs. TAIR 10
Match: AT1G12300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 235.3 bits (599), Expect = 1.2e-61
Identity = 142/433 (32.79%), Postives = 209/433 (48.27%), Query Frame = 0


Query: 158 TYDLLLRNLCQMGLHDSAKIVFDCMRSDGIFPDSSIVELLVSSSAQMGKIDSAKKFLDEV 217
           T+  L+  LC  G    A  + D M   G  PD   +  LV+     GK   A   +D++
Sbjct: 160 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKM 219

Query: 218 HCYGIKVSPFVYNNLLNMLVKQNQVDEAVLLFREHLEPYFIPDVYTFNILIRGLCRIGEI 277
             YG + +   Y  +LN++ K  Q   A+ L R+  E     D   ++I+I GLC+ G +
Sbjct: 220 VEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSL 279

Query: 278 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEVQSMK----------- 337
           D AF  F  M   G   +I++YN LI GFC       G  LL+++   K           
Sbjct: 280 DNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVL 339

Query: 338 -----------------------GVSPDVITYTSIISGYCKLGDMQAASELFDEMVSSGI 397
                                  G++PD ITYTS+I G+CK   +  A+++ D MVS G 
Sbjct: 340 IDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGC 399

Query: 398 KPNDFTFNVLIDGFGKAGDMRSALVMYEKMLLLGCTPDVVTITSLIDGYCRAGEVHQGLK 457
            PN  TFN+LI+G+ KA  +   L ++ KM L G   D VT  +LI G+C  G+++   +
Sbjct: 400 DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKE 459

Query: 458 LWEEMIVRDLSPNVYTYAVLINALCKENRIQEARNFLRYLKLSEVVPKPFIYNPVIDGFC 517
           L++EM+ R + PN+ TY +L++ LC     ++A      ++ S++     IYN +I G C
Sbjct: 460 LFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMC 519

Query: 518 KAGKVDEANVIVAEMQEKKCSPDKITFTILIIGNCMKGRMVEAISLFYKMLETNCIPDEI 557
            A KVD+A  +   +  K   P   T+ I+I G C KG + EA  LF KM E    PD  
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGW 579

The following BLAST results are available for this feature:

BLAST of Spg003620 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7030515.1	0.0e+00	90.76	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_023546864.1	0.0e+00	90.76	pentatricopeptide repeat-containing protein At2g06000 isoform X1 [Cucurbita pepo...	[more]
XP_038890050.1	0.0e+00	91.43	pentatricopeptide repeat-containing protein At2g06000 [Benincasa hispida]	[more]
XP_022946631.1	0.0e+00	90.92	pentatricopeptide repeat-containing protein At2g06000 isoform X1 [Cucurbita mosc...	[more]
XP_022999210.1	0.0e+00	90.59	pentatricopeptide repeat-containing protein At2g06000 isoform X1 [Cucurbita maxi...	[more]

BLAST of Spg003620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZUE9	3.9e-161	54.23	Pentatricopeptide repeat-containing protein At2g06000 OS=Arabidopsis thaliana OX...	[more]
Q9FIX3	4.5e-69	32.29	Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX...	[more]
Q9LSL9	4.6e-61	34.59	Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX...	[more]
Q0WKV3	1.7e-60	32.79	Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidop...	[more]
Q9LFF1	6.6e-60	30.23	Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop...	[more]

BLAST of Spg003620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G470	0.0e+00	90.92	pentatricopeptide repeat-containing protein At2g06000 isoform X1 OS=Cucurbita mo...	[more]
A0A6J1KES2	0.0e+00	90.59	pentatricopeptide repeat-containing protein At2g06000 isoform X1 OS=Cucurbita ma...	[more]
A0A6J1DMW0	0.0e+00	90.08	pentatricopeptide repeat-containing protein At2g06000 OS=Momordica charantia OX=...	[more]
A0A1S3CB42	2.6e-301	88.44	pentatricopeptide repeat-containing protein At2g06000 OS=Cucumis melo OX=3656 GN...	[more]
A0A5A7V6K1	2.6e-301	88.44	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of Spg003620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G06000.1	2.8e-162	54.23	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G06000.2	2.8e-162	54.23	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G39710.1	3.2e-70	32.29	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G65560.1	3.2e-62	34.59	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G12300.1	1.2e-61	32.79	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 463..575 e-value: 3.2E-25 score: 91.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 253..324 e-value: 2.1E-21 score: 78.3 coord: 325..395 e-value: 8.1E-24 score: 86.2 coord: 396..462 e-value: 2.6E-20 score: 74.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 111..239 e-value: 2.5E-16 score: 61.6
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 158..187 e-value: 0.0041 score: 17.3 coord: 544..563 e-value: 0.17 score: 12.2 coord: 228..251 e-value: 0.013 score: 15.7
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 259..308 e-value: 1.8E-16 score: 60.1 coord: 400..449 e-value: 5.0E-17 score: 61.8 coord: 473..518 e-value: 8.5E-14 score: 51.5 coord: 330..378 e-value: 6.1E-19 score: 68.0
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 262..296 e-value: 6.5E-10 score: 36.6 coord: 368..402 e-value: 6.0E-9 score: 33.5 coord: 474..506 e-value: 1.3E-9 score: 35.6 coord: 403..437 e-value: 2.6E-9 score: 34.7 coord: 508..542 e-value: 1.5E-5 score: 22.9 coord: 333..366 e-value: 7.2E-12 score: 42.7 coord: 297..332 e-value: 2.6E-7 score: 28.4 coord: 438..470 e-value: 2.0E-4 score: 19.3
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 155..189 score: 10.040608
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 506..540 score: 10.347525
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 401..435 score: 12.41921
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 225..259 score: 9.04313
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 436..470 score: 10.862706
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 366..400 score: 11.99172
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 295..330 score: 10.095415
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 260..294 score: 13.339959
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 331..365 score: 14.666277
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 471..505 score: 11.99172
None	No IPR available	PANTHER	PTHR47941:SF1	OSJNBA0027P08.18 PROTEIN	coord: 62..595
None	No IPR available	PANTHER	PTHR47941	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIAL	coord: 62..595
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 227..397

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg003620.1	Spg003620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding