Spg003523 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg003523
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Zeta-carotene desaturase
Location	scaffold4: 45898726 .. 45901986 (-)
RNA-Seq Expression	Spg003523
Synteny	Spg003523

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACTGAATCAAAACTTTTAAAATTATAAAACCCAAATTTAAATATAACCAAACAATAAAAACTAAATTGGATCTTTAACATGATAGATACCATATTGAAACTAAACTCAATCCGTATGAATCAAATTTGTAATTTAATAAATTTATAATATGTTGTAAGTTTGTAAATTTATCAGCCAACGAAAATTGAAAAAGAAAAAGAGGAAAAAAGAAAAAAACAACAAACGGCTTTAAATCCCTTACTATATACGTGGCACGTGACATGGCAACTTTCGTCGGACTCGCCGGAGGCGCCGTCTCTGGGAGGATACTGGCCGGAATCTGTTACTGGCCACCGCTTCCTCCATCTCTATTCCCCAAGGTCTGTACCTTCTACACGGTGGCTTCATTTCAACTCTCCGTCTTTTTCAATCCTCATTCTCTCCGATTCACTTTCAACCGTTCGTTTTTGGTAGACGCTATCCGCCATACGATGCTTCTCAAGCTCGCCGGGGAATTCCAGCAGCAGCCGGAAGAAGGAGACCTCCGCGGTTGTGAAAATCGCAGTGAGTGGAGTCACAGAGCTTCTTAGGCTTTTCTCCTCTCCGAACAGTAAGAGGTAATTTCGTTCTGGAATCCGCGCTCTCTTTGTTTTATGAGGAAAAATTAGGGATGTGTTGTTCTAATTTCTGCTGATAACATGCGACAGAGAGATGTGAATTCGATTCTGTTTGGTCTATTTCTGTGTTGCAGAGTTGATGAAGTTGAGGATAATCAGGAGTTTGTAGTCATAGACATTGATGATGTTCTAAATATCCTGAAATCAGACTATGAGAATGCTTACTTTGTCACTGGTACATTCATAGTTCACAATTTTCATAGCTGATTCTTTGTTTTCCTCTGCAAGACTTTGATTTCTGAGTTCTTCCCTTATGAAACAATCATCATTCAATCTATATTTTCAAATTACTGACAACTTCTTTTCAGTTTGTTAACAAATACTCCAACCCTGAATTCTCTAGTACACGGATATGCTGTTTGTGTTTATACTAGAATTATGAAATGTTTTTGTGATTGCTACTGAAGTTTAAAGATTGCGGCTCATTGCCATCTTTTTATGCAACTGGTATAATAAATTCTCTGGAAATTCTTGCTTCCAACATTGAGATTGTAATGCTGCAAATTAGAGAACCTTTAATATGAATGGATGCTGTGTGTAAATGCTGTATTGAAGCAGAAATGAAGCTCTTGAAGTGTATTTTGTGATGGCCTTATACTTGAAACAGGAATATTCACTTCTGCAATCTATGCTGACGATTGTCTCTTCGAAGATCCGACCATCAGATTTCGAGGTAATAATAATCCTGTCTATTAAACTGGTGAAGAATTACTTTTAACAGCACAGACTGAAGTGATTATTATTTAGTTTTGATGGAATACTTTGATTTTCTAATCCCTTCATGCCTTAAAGTTGCTTTATGGACTTTTAACTCTGTAGGTAAGGAGCTGTATTCACGGAACTTGAAGTTACTTGTTCCCTTTTTTGATTGTCCATCAATCCAACTACAAACAATCAATAAGGTAATTTTGTTCTTGTGAATTCATCTTTTTTTCTTTGGATTGACGAGCAAATGGACTGGGTTAATTAATGGAAAATAACTGCAACAACTTTGAGTTTCAAACTGCTGTATTGAGAGCCAACATTTATTATGGTGAGTTTTGGTTGTATTTGGCTGCTAAGAGATGGATGTTTGAGTAGAGCATAGCATCCTATTTAATGATAAGACATTTGGTTATTTAAAACAATGTTATATATATATATTTTTTGTAGCTTTTAAAATATTGGCAAGCATTCATAGAATGGAACAGATAAGCACATAATAGTTTGTTCTTTGAGAATTGATCTCAATCTGCTGCTGCTCCTCCAACATCTTCCCATCTGACTCTGAAACTTGTGCTTCAAATCTCTGTATTGCTCCTTAAGAAACATTTGCTGATTTTAAAGATAAAAACTGCAGGGTAACAAATCTGGAGTTGAATTTGTGTTGGCAGCATGGAAACTAAGGTATTTAACCAAATCTACTCTCATGCATTAAGTCAGATCCAAGTGCAACTACATTCTTTTGAGTTATTTGAGTTTTGGAGTGCTGGAATCCTTTCATTTCTGACTTTTGAGGCTTTATTTTGTATGAATTCCAAAAGAATGGAAATAGGCAATATGATTTGTTATTGCATTGGTTCTTTTAGTAGGTATTTTCAAGCATCTTTTTTCTGATTTTTCTTTTCCTGGATGGTGCCACAGTTATTTAAATTTTCCCACATCAGTAGCTAATCCAAATTTCCAATATTCCTGATTTCCATGTGATTTCCTTGTAGGACATACCTAAAACTTCCATGGAGGCCACTCATTTCTATTGATGGAAGTACACTATATGAACTAGATGAAAAATTGAAAGTGAGAATCAGAAATCCTCTCAACTGTGTTTTCAAGATGGTTTTAGGAAAGTCATATTTGAATTTTCTAAAAGTTTTATTGCAAATTCTGTGCTGAAACACATTTCCTGATTTGTTTTTACAGAAAACTAAAATTTCTGTTCGGAGATAGTTAAAATTTAGTTCATATAGTTTTAAAAGTTAGAATTATTCGTCCATCTGGTTTGATAAAACCCTCCGACTAAATTCTAACTTTTAAAATCACAAGGACTGAATTCTAACTATCTCCAAACAACAGGGACCAAATTTGTAATTTAACCGAATACATATATATGTCCGAACCCCAATATTTGATTGCTTTCCATTTTCATCCTATCAGATAGTAAGGCATGCTGAGAGCTGGAGTGTATCTGCACTTGAAGCAATAGGTCAGATATTCATCCCTAGTTTTGGAGGAGACTGAGAATTGATTTGTACAAAACTTTCTCCAGGAATCAGATCTTATAACTTGATCAGCAGCAGTGGCCAAATATGACTGCCACGATGAATCTAAACCGTCCATTCATTTGATTTGTAAGTTCTTCTTCTCACTAATTTTTTATACCAAATGTCATAAACAGCTGAGAACTGTAGTTTACTTGTATAGAATTTTGCTCCATCCAATTAACTAAAACTTGTTATCATGTTTAAAATTAGGGAAGATTTCATTTCCCCCCTGTACTTTCCTCTCTCTTTTGTTTTTCCTTTCCTCGAGTGTTTGGGCCAAACTACATGTACCTTGACTAATTTCACGTGACAATTTAATTGACTTCAAAATGCTTGAATGTTGAAGTTAATTAAGCACCGGATT

mRNA sequence

ATGGCAACTTTCGTCGGACTCGCCGGAGGCGCCGTCTCTGGGAGGATACTGGCCGGAATCTGTTACTGGCCACCGCTTCCTCCATCTCTATTCCCCAAGACGCTATCCGCCATACGATGCTTCTCAAGCTCGCCGGGGAATTCCAGCAGCAGCCGGAAGAAGGAGACCTCCGCGGTTGTGAAAATCGCAGTGAGTGGAGTCACAGAGCTTCTTAGGCTTTTCTCCTCTCCGAACAGTAAGAGAGTTGATGAAGTTGAGGATAATCAGGAGTTTGTAGTCATAGACATTGATGATGTTCTAAATATCCTGAAATCAGACTATGAGAATGCTTACTTTGTCACTGGAATATTCACTTCTGCAATCTATGCTGACGATTGTCTCTTCGAAGATCCGACCATCAGATTTCGAGGTAAGGAGCTGTATTCACGGAACTTGAAGTTACTTGTTCCCTTTTTTGATTGTCCATCAATCCAACTACAAACAATCAATAAGGGTAACAAATCTGGAGTTGAATTTGTGTTGGCAGCATGGAAACTAAGGACATACCTAAAACTTCCATGGAGGCCACTCATTTCTATTGATGGAAGTACACTATATGAACTAGATGAAAAATTGAAAGTGAGAATCAGAAATCCTCTCAACTGTATAGTAAGGCATGCTGAGAGCTGGAGTGTATCTGCACTTGAAGCAATAGGTCAGATATTCATCCCTAGTTTTGGAGGAGACTGA

Coding sequence (CDS)

ATGGCAACTTTCGTCGGACTCGCCGGAGGCGCCGTCTCTGGGAGGATACTGGCCGGAATCTGTTACTGGCCACCGCTTCCTCCATCTCTATTCCCCAAGACGCTATCCGCCATACGATGCTTCTCAAGCTCGCCGGGGAATTCCAGCAGCAGCCGGAAGAAGGAGACCTCCGCGGTTGTGAAAATCGCAGTGAGTGGAGTCACAGAGCTTCTTAGGCTTTTCTCCTCTCCGAACAGTAAGAGAGTTGATGAAGTTGAGGATAATCAGGAGTTTGTAGTCATAGACATTGATGATGTTCTAAATATCCTGAAATCAGACTATGAGAATGCTTACTTTGTCACTGGAATATTCACTTCTGCAATCTATGCTGACGATTGTCTCTTCGAAGATCCGACCATCAGATTTCGAGGTAAGGAGCTGTATTCACGGAACTTGAAGTTACTTGTTCCCTTTTTTGATTGTCCATCAATCCAACTACAAACAATCAATAAGGGTAACAAATCTGGAGTTGAATTTGTGTTGGCAGCATGGAAACTAAGGACATACCTAAAACTTCCATGGAGGCCACTCATTTCTATTGATGGAAGTACACTATATGAACTAGATGAAAAATTGAAAGTGAGAATCAGAAATCCTCTCAACTGTATAGTAAGGCATGCTGAGAGCTGGAGTGTATCTGCACTTGAAGCAATAGGTCAGATATTCATCCCTAGTTTTGGAGGAGACTGA

Protein sequence

MATFVGLAGGAVSGRILAGICYWPPLPPSLFPKTLSAIRCFSSSPGNSSSSRKKETSAVVKIAVSGVTELLRLFSSPNSKRVDEVEDNQEFVVIDIDDVLNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIRFRGKELYSRNLKLLVPFFDCPSIQLQTINKGNKSGVEFVLAAWKLRTYLKLPWRPLISIDGSTLYELDEKLKVRIRNPLNCIVRHAESWSVSALEAIGQIFIPSFGGD

Homology

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BLAST of Spg003523 vs. NCBI nr
Match: XP_022946926.1 (uncharacterized protein LOC111450860 [Cucurbita moschata])

HSP 1 Score: 377.9 bits (969), Expect = 6.7e-101
Identity = 196/228 (85.96%), Postives = 203/228 (89.04%), Query Frame = 0


Query: 17  LAGICYWPPLPPSLFPKTLSAIRCFSSSPGNSSSSRKKETSAVVKIAVSGVTELLRLFSS 76
           + GICY PPLPPSL PK ++AIRCFSSSP NS+SSRKKE SA+VKIAVSGVTELLRLFSS
Sbjct: 1   MTGICYCPPLPPSLSPKMVTAIRCFSSSPENSNSSRKKEASAIVKIAVSGVTELLRLFSS 60

Query: 77  PNSKRVDEVEDNQ--EFVVIDIDDVLNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR 136
           P SKRVD V DNQ  EFVV  IDDVLNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR
Sbjct: 61  PISKRVDGVGDNQGEEFVVAGIDDVLNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR 120

Query: 137 FRGKELYSRNLKLLVPFFDCPSIQLQTINKGNKSGVEFVLAAWKLRTYLKLPWRPLISID 196
           FRGKELYSRNLKLLVPFFDCPSIQLQTI+KGNKSGVEFVLAAWKLRTYLKLPWRPLISID
Sbjct: 121 FRGKELYSRNLKLLVPFFDCPSIQLQTIDKGNKSGVEFVLAAWKLRTYLKLPWRPLISID 180

Query: 197 GSTLYELDEKLKVRIRNPLNCIVRHAESWSVSALEAIGQIFIPSFGGD 243
           GSTLYELDE+LK         I RHAESWSVSALEAI QIFIPSF GD
Sbjct: 181 GSTLYELDEELK---------IARHAESWSVSALEAITQIFIPSFKGD 219

[Close]

BLAST of Spg003523 vs. NCBI nr
Match: XP_023545588.1 (uncharacterized protein LOC111804973 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 377.1 bits (967), Expect = 1.1e-100
Identity = 195/228 (85.53%), Postives = 202/228 (88.60%), Query Frame = 0


Query: 17  LAGICYWPPLPPSLFPKTLSAIRCFSSSPGNSSSSRKKETSAVVKIAVSGVTELLRLFSS 76
           + GICY PPLPPSL PK ++AIRCFSSSP NS+ SR+KE SA+VKIAVSGVTELLRLFSS
Sbjct: 1   MTGICYCPPLPPSLSPKMVTAIRCFSSSPENSNGSRRKEASAIVKIAVSGVTELLRLFSS 60

Query: 77  PNSKRVDEVEDNQ--EFVVIDIDDVLNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR 136
           P SKRVD V DNQ  EFVV  IDDVLNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR
Sbjct: 61  PISKRVDGVGDNQGEEFVVAGIDDVLNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR 120

Query: 137 FRGKELYSRNLKLLVPFFDCPSIQLQTINKGNKSGVEFVLAAWKLRTYLKLPWRPLISID 196
           FRGKELYSRNLKLLVPFFDCPSIQLQTINKGNKSGVEFVLAAWKLRTYLKLPWRPLISID
Sbjct: 121 FRGKELYSRNLKLLVPFFDCPSIQLQTINKGNKSGVEFVLAAWKLRTYLKLPWRPLISID 180

Query: 197 GSTLYELDEKLKVRIRNPLNCIVRHAESWSVSALEAIGQIFIPSFGGD 243
           GSTLYELDE+LK         I RHAESWSVSALEAI QIFIPSF GD
Sbjct: 181 GSTLYELDEELK---------IARHAESWSVSALEAITQIFIPSFKGD 219

[Close]

BLAST of Spg003523 vs. NCBI nr
Match: KAG6599294.1 (hypothetical protein SDJN03_09072, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 376.7 bits (966), Expect = 1.5e-100
Identity = 195/228 (85.53%), Postives = 203/228 (89.04%), Query Frame = 0


Query: 17  LAGICYWPPLPPSLFPKTLSAIRCFSSSPGNSSSSRKKETSAVVKIAVSGVTELLRLFSS 76
           + GICY PPLPPSL PK ++AIRCFSSSP NS+SSRKKE SA+VKIAVSGVTELLRLFSS
Sbjct: 1   MTGICYCPPLPPSLSPKMVTAIRCFSSSPENSNSSRKKEASAIVKIAVSGVTELLRLFSS 60

Query: 77  PNSKRVDEVEDNQ--EFVVIDIDDVLNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR 136
           P SKRVD V DNQ  EFVV  +DDVLNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR
Sbjct: 61  PISKRVDGVGDNQGEEFVVAGMDDVLNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR 120

Query: 137 FRGKELYSRNLKLLVPFFDCPSIQLQTINKGNKSGVEFVLAAWKLRTYLKLPWRPLISID 196
           FRGKELYSRNLKLLVPFFDCPSIQLQTI+KGNKSGVEFVLAAWKLRTYLKLPWRPLISID
Sbjct: 121 FRGKELYSRNLKLLVPFFDCPSIQLQTIDKGNKSGVEFVLAAWKLRTYLKLPWRPLISID 180

Query: 197 GSTLYELDEKLKVRIRNPLNCIVRHAESWSVSALEAIGQIFIPSFGGD 243
           GSTLYELDE+LK         I RHAESWSVSALEAI QIFIPSF GD
Sbjct: 181 GSTLYELDEELK---------IARHAESWSVSALEAITQIFIPSFKGD 219

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BLAST of Spg003523 vs. NCBI nr
Match: XP_022999247.1 (uncharacterized protein LOC111493675 [Cucurbita maxima])

HSP 1 Score: 374.8 bits (961), Expect = 5.7e-100
Identity = 194/228 (85.09%), Postives = 201/228 (88.16%), Query Frame = 0


Query: 17  LAGICYWPPLPPSLFPKTLSAIRCFSSSPGNSSSSRKKETSAVVKIAVSGVTELLRLFSS 76
           + GICY PPLPPSL PK ++AIRCFSSSP NS+ SRKKE SA+VKIAVSG TELLRLFSS
Sbjct: 1   MTGICYCPPLPPSLSPKMVTAIRCFSSSPENSNGSRKKEASAIVKIAVSGATELLRLFSS 60

Query: 77  PNSKRVDEVEDNQ--EFVVIDIDDVLNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR 136
           P SKRV+ V DNQ  EFVV  IDDVLNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR
Sbjct: 61  PISKRVNGVGDNQGEEFVVAGIDDVLNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR 120

Query: 137 FRGKELYSRNLKLLVPFFDCPSIQLQTINKGNKSGVEFVLAAWKLRTYLKLPWRPLISID 196
           FRGKELYSRNLKLLVPFFDCPSIQLQTINKGNKSGVEFVLAAWKLRTYLKLPWRPLISID
Sbjct: 121 FRGKELYSRNLKLLVPFFDCPSIQLQTINKGNKSGVEFVLAAWKLRTYLKLPWRPLISID 180

Query: 197 GSTLYELDEKLKVRIRNPLNCIVRHAESWSVSALEAIGQIFIPSFGGD 243
           GSTLYELDE+LK         I RHAESWSVSALEAI QIFIPSF GD
Sbjct: 181 GSTLYELDEELK---------IARHAESWSVSALEAITQIFIPSFKGD 219

[Close]

BLAST of Spg003523 vs. NCBI nr
Match: XP_004139222.1 (uncharacterized protein LOC101220191 isoform X1 [Cucumis sativus] >KGN60827.1 hypothetical protein Csa_019272 [Cucumis sativus])

HSP 1 Score: 371.3 bits (952), Expect = 6.3e-99
Identity = 188/225 (83.56%), Postives = 199/225 (88.44%), Query Frame = 0


Query: 17  LAGICYWPPLPPSLFPKTLSAIRCFSSSPGNSSSSRKKETSAVVKIAVSGVTELLRLFSS 76
           +AGICY PPLPPSL PKT+S IRCFSSSP NS+ SRKKE SA+VKI VSG+TELLRLFSS
Sbjct: 1   MAGICYCPPLPPSLSPKTVSVIRCFSSSPENSNGSRKKEASAIVKITVSGITELLRLFSS 60

Query: 77  PNSKRVDEVEDNQ--EFVVIDIDDVLNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR 136
           P SKRVDE+ DNQ  EFVV  +D+V+NILKSDYENAYFVTGIFTSAIY DDCLFEDPTIR
Sbjct: 61  PISKRVDEIRDNQGEEFVVTGVDEVVNILKSDYENAYFVTGIFTSAIYTDDCLFEDPTIR 120

Query: 137 FRGKELYSRNLKLLVPFFDCPSIQLQTINKGNKSGVEFVLAAWKLRTYLKLPWRPLISID 196
           FRGKELYSRNLKLLVPFFDCPSIQLQTINK NKSGVEFVLAAWKLRTYLKLPWRPLISID
Sbjct: 121 FRGKELYSRNLKLLVPFFDCPSIQLQTINKSNKSGVEFVLAAWKLRTYLKLPWRPLISID 180

Query: 197 GSTLYELDEKLKVRIRNPLNCIVRHAESWSVSALEAIGQIFIPSF 240
           G+TLYELDE+ K         IVRHAESWSVSALEAI QIFIPSF
Sbjct: 181 GNTLYELDEEFK---------IVRHAESWSVSALEAITQIFIPSF 216

[Close]

BLAST of Spg003523 vs. ExPASy TrEMBL
Match: A0A6J1G4Y1 (uncharacterized protein LOC111450860 OS=Cucurbita moschata OX=3662 GN=LOC111450860 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 3.2e-101
Identity = 196/228 (85.96%), Postives = 203/228 (89.04%), Query Frame = 0


Query: 17  LAGICYWPPLPPSLFPKTLSAIRCFSSSPGNSSSSRKKETSAVVKIAVSGVTELLRLFSS 76
           + GICY PPLPPSL PK ++AIRCFSSSP NS+SSRKKE SA+VKIAVSGVTELLRLFSS
Sbjct: 1   MTGICYCPPLPPSLSPKMVTAIRCFSSSPENSNSSRKKEASAIVKIAVSGVTELLRLFSS 60

Query: 77  PNSKRVDEVEDNQ--EFVVIDIDDVLNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR 136
           P SKRVD V DNQ  EFVV  IDDVLNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR
Sbjct: 61  PISKRVDGVGDNQGEEFVVAGIDDVLNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR 120

Query: 137 FRGKELYSRNLKLLVPFFDCPSIQLQTINKGNKSGVEFVLAAWKLRTYLKLPWRPLISID 196
           FRGKELYSRNLKLLVPFFDCPSIQLQTI+KGNKSGVEFVLAAWKLRTYLKLPWRPLISID
Sbjct: 121 FRGKELYSRNLKLLVPFFDCPSIQLQTIDKGNKSGVEFVLAAWKLRTYLKLPWRPLISID 180

Query: 197 GSTLYELDEKLKVRIRNPLNCIVRHAESWSVSALEAIGQIFIPSFGGD 243
           GSTLYELDE+LK         I RHAESWSVSALEAI QIFIPSF GD
Sbjct: 181 GSTLYELDEELK---------IARHAESWSVSALEAITQIFIPSFKGD 219

[Close]

BLAST of Spg003523 vs. ExPASy TrEMBL
Match: A0A6J1KAD4 (uncharacterized protein LOC111493675 OS=Cucurbita maxima OX=3661 GN=LOC111493675 PE=4 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 2.7e-100
Identity = 194/228 (85.09%), Postives = 201/228 (88.16%), Query Frame = 0


Query: 17  LAGICYWPPLPPSLFPKTLSAIRCFSSSPGNSSSSRKKETSAVVKIAVSGVTELLRLFSS 76
           + GICY PPLPPSL PK ++AIRCFSSSP NS+ SRKKE SA+VKIAVSG TELLRLFSS
Sbjct: 1   MTGICYCPPLPPSLSPKMVTAIRCFSSSPENSNGSRKKEASAIVKIAVSGATELLRLFSS 60

Query: 77  PNSKRVDEVEDNQ--EFVVIDIDDVLNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR 136
           P SKRV+ V DNQ  EFVV  IDDVLNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR
Sbjct: 61  PISKRVNGVGDNQGEEFVVAGIDDVLNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR 120

Query: 137 FRGKELYSRNLKLLVPFFDCPSIQLQTINKGNKSGVEFVLAAWKLRTYLKLPWRPLISID 196
           FRGKELYSRNLKLLVPFFDCPSIQLQTINKGNKSGVEFVLAAWKLRTYLKLPWRPLISID
Sbjct: 121 FRGKELYSRNLKLLVPFFDCPSIQLQTINKGNKSGVEFVLAAWKLRTYLKLPWRPLISID 180

Query: 197 GSTLYELDEKLKVRIRNPLNCIVRHAESWSVSALEAIGQIFIPSFGGD 243
           GSTLYELDE+LK         I RHAESWSVSALEAI QIFIPSF GD
Sbjct: 181 GSTLYELDEELK---------IARHAESWSVSALEAITQIFIPSFKGD 219

[Close]

BLAST of Spg003523 vs. ExPASy TrEMBL
Match: A0A0A0LJD8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G011600 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 3.0e-99
Identity = 188/225 (83.56%), Postives = 199/225 (88.44%), Query Frame = 0


Query: 17  LAGICYWPPLPPSLFPKTLSAIRCFSSSPGNSSSSRKKETSAVVKIAVSGVTELLRLFSS 76
           +AGICY PPLPPSL PKT+S IRCFSSSP NS+ SRKKE SA+VKI VSG+TELLRLFSS
Sbjct: 1   MAGICYCPPLPPSLSPKTVSVIRCFSSSPENSNGSRKKEASAIVKITVSGITELLRLFSS 60

Query: 77  PNSKRVDEVEDNQ--EFVVIDIDDVLNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR 136
           P SKRVDE+ DNQ  EFVV  +D+V+NILKSDYENAYFVTGIFTSAIY DDCLFEDPTIR
Sbjct: 61  PISKRVDEIRDNQGEEFVVTGVDEVVNILKSDYENAYFVTGIFTSAIYTDDCLFEDPTIR 120

Query: 137 FRGKELYSRNLKLLVPFFDCPSIQLQTINKGNKSGVEFVLAAWKLRTYLKLPWRPLISID 196
           FRGKELYSRNLKLLVPFFDCPSIQLQTINK NKSGVEFVLAAWKLRTYLKLPWRPLISID
Sbjct: 121 FRGKELYSRNLKLLVPFFDCPSIQLQTINKSNKSGVEFVLAAWKLRTYLKLPWRPLISID 180

Query: 197 GSTLYELDEKLKVRIRNPLNCIVRHAESWSVSALEAIGQIFIPSF 240
           G+TLYELDE+ K         IVRHAESWSVSALEAI QIFIPSF
Sbjct: 181 GNTLYELDEEFK---------IVRHAESWSVSALEAITQIFIPSF 216

[Close]

BLAST of Spg003523 vs. ExPASy TrEMBL
Match: A0A1S3C2Z9 (uncharacterized protein LOC103495870 OS=Cucumis melo OX=3656 GN=LOC103495870 PE=4 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 1.5e-93
Identity = 180/228 (78.95%), Postives = 195/228 (85.53%), Query Frame = 0


Query: 17  LAGICYWPPLPPSLFPKTLSAIRCFSSSPGNSSSSRKKETSAVVKIAVSGVTELLRLFSS 76
           +AGI Y PPLPPSL PKT+SAIRC SSSP NS+ SRKKE S ++KI VSG+TELLRLFSS
Sbjct: 1   MAGISYCPPLPPSLSPKTVSAIRCLSSSPENSNGSRKKEASTILKITVSGITELLRLFSS 60

Query: 77  PNSKRVDEVEDNQ--EFVVIDIDDVLNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR 136
           P SKRVD + DNQ  EFVV  +D+V++ILKSDYENAYFVTG FTSAIY D CLFEDPTIR
Sbjct: 61  PISKRVDGIRDNQEEEFVVTGVDEVVDILKSDYENAYFVTGTFTSAIYTDHCLFEDPTIR 120

Query: 137 FRGKELYSRNLKLLVPFFDCPSIQLQTINKGNKSGVEFVLAAWKLRTYLKLPWRPLISID 196
           FRGKELYSRNLKLLVPFFDCPSIQL+TINK NKSGVEFVLAAWKLRTYLKLPWRPLISID
Sbjct: 121 FRGKELYSRNLKLLVPFFDCPSIQLKTINKSNKSGVEFVLAAWKLRTYLKLPWRPLISID 180

Query: 197 GSTLYELDEKLKVRIRNPLNCIVRHAESWSVSALEAIGQIFIPSFGGD 243
           G+TLYELD++ K         IVRHAESWSVSALEAI QIFIPSF  D
Sbjct: 181 GNTLYELDDEFK---------IVRHAESWSVSALEAITQIFIPSFERD 219

[Close]

BLAST of Spg003523 vs. ExPASy TrEMBL
Match: A0A6J1CMH1 (uncharacterized protein LOC111012984 isoform X5 OS=Momordica charantia OX=3673 GN=LOC111012984 PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 2.6e-90
Identity = 185/258 (71.71%), Postives = 196/258 (75.97%), Query Frame = 0


Query: 11  AVSGRILAGICYWPPLPPSLFPKTLSAIRCFSSSPGNSSSSRKKETSAVVKIAVSGVTEL 70
           +VS R +AGIC  PPLP SL PKT   +RCFSSSP NS   RKKE S +VKIAVSGVTEL
Sbjct: 28  SVSDRPMAGICCSPPLPSSLSPKTKYDVRCFSSSPDNSGGRRKKEASPIVKIAVSGVTEL 87

Query: 71  LRLFSSPNSK------------------------RVDEVEDNQ--EFVVIDIDDVLNILK 130
           LRLFSS  S                         R D V DNQ  EFVV  +DDVL+ILK
Sbjct: 88  LRLFSSSKSSTPKWFMKMRPGHMNSILFGLCLSCRFDGVGDNQKEEFVVAGVDDVLDILK 147

Query: 131 SDYENAYFVTGIFTSAIYADDCLFEDPTIRFRGKELYSRNLKLLVPFFDCPSIQLQTINK 190
           SDY+NAYFVTGIFTS IYADDCLFEDPTI+FRGKELYSRNLKLLVPFFDCPSIQLQ INK
Sbjct: 148 SDYKNAYFVTGIFTSEIYADDCLFEDPTIKFRGKELYSRNLKLLVPFFDCPSIQLQKINK 207

Query: 191 GNKSGVEFVLAAWKLRTYLKLPWRPLISIDGSTLYELDEKLKVRIRNPLNCIVRHAESWS 243
           GNKSGVEFV+AAWKLRTYLKLPWRPLI+I GSTLYELDE+LK         IVRHAESWS
Sbjct: 208 GNKSGVEFVVAAWKLRTYLKLPWRPLITIHGSTLYELDEELK---------IVRHAESWS 267

[Close]

BLAST of Spg003523 vs. TAIR 10
Match: AT3G04890.1 (Uncharacterized conserved protein (DUF2358) )

HSP 1 Score: 223.8 bits (569), Expect = 1.5e-58
Identity = 118/200 (59.00%), Postives = 143/200 (71.50%), Query Frame = 0


Query: 39  RCFSSSPGNSSSSRKKETSAVVKIAVSGVTELLRLFS-SPNSKRVDEVED--NQEFVVID 98
           RCFS SP       +K+T AV+K AVSGVTE LRL S +P+S  +   +D    E    D
Sbjct: 24  RCFSGSP-------EKKTPAVLKWAVSGVTEFLRLISGAPSSTSIATNKDRSKNEVTAGD 83

Query: 99  IDDVLNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIRFRGKELYSRNLKLLVPFFDCP 158
           +DDV+ IL+SDY N YFVTG+ TSAIY+DDC+FEDPTI F+G ELY RNLKLLVPF +  
Sbjct: 84  VDDVMGILRSDYRNFYFVTGVLTSAIYSDDCIFEDPTISFQGTELYERNLKLLVPFLEDA 143

Query: 159 SIQLQTINKGNKSGVEFVLAAWKLRTYLKLPWRPLISIDGSTLYELDEKLKVRIRNPLNC 218
           SI+LQ + K   S   ++LA WKLRTYLKLPWRPLISI+G+T+Y+LD+  K         
Sbjct: 144 SIELQNMEKSESSQRNYILATWKLRTYLKLPWRPLISINGNTVYDLDKDFK--------- 203

Query: 219 IVRHAESWSVSALEAIGQIF 236
           IVRH ESW+VSALEAIGQIF
Sbjct: 204 IVRHVESWNVSALEAIGQIF 207

[Close]

BLAST of Spg003523 vs. TAIR 10
Match: AT3G04890.2 (Uncharacterized conserved protein (DUF2358) )

HSP 1 Score: 195.7 bits (496), Expect = 4.4e-50
Identity = 100/174 (57.47%), Postives = 125/174 (71.84%), Query Frame = 0


Query: 39  RCFSSSPGNSSSSRKKETSAVVKIAVSGVTELLRLFS-SPNSKRVDEVED--NQEFVVID 98
           RCFS SP       +K+T AV+K AVSGVTE LRL S +P+S  +   +D    E    D
Sbjct: 24  RCFSGSP-------EKKTPAVLKWAVSGVTEFLRLISGAPSSTSIATNKDRSKNEVTAGD 83

Query: 99  IDDVLNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIRFRGKELYSRNLKLLVPFFDCP 158
           +DDV+ IL+SDY N YFVTG+ TSAIY+DDC+FEDPTI F+G ELY RNLKLLVPF +  
Sbjct: 84  VDDVMGILRSDYRNFYFVTGVLTSAIYSDDCIFEDPTISFQGTELYERNLKLLVPFLEDA 143

Query: 159 SIQLQTINKGNKSGVEFVLAAWKLRTYLKLPWRPLISIDGSTLYELDEKLKVRI 210
           SI+LQ + K   S   ++LA WKLRTYLKLPWRPLISI+G+T+Y+LD+  K  +
Sbjct: 144 SIELQNMEKSESSQRNYILATWKLRTYLKLPWRPLISINGNTVYDLDKDFKALV 190

[Close]

BLAST of Spg003523 vs. TAIR 10
Match: AT2G46100.1 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 77.0 bits (188), Expect = 2.3e-14
Identity = 40/142 (28.17%), Postives = 63/142 (44.37%), Query Frame = 0


Query: 99  VLNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIRFRGKELYSRNLKLLVPFFDCPSIQ 158
           V++ +K D++ +YFVTG  T  +Y + C F DP   F+G   + RN        +  +++
Sbjct: 105 VVDSIKQDFKRSYFVTGNLTPEVYEEKCEFADPAGSFKGLARFKRNCTNFGSLIEKSNMK 164

Query: 159 LQTINKGNKSGVEFVLAAWKLRTYLKLPWRPLISIDGSTLYELDEKLKVRIRNPLNCIVR 218
           L         G+      WK    +  PW+P++S  G T Y  D +           I R
Sbjct: 165 LMKWENFEDKGI----GHWKFSCVMSFPWKPILSATGYTEYYFDTE--------SGKICR 224

Query: 219 HAESWSVSALEAIGQIFIPSFG 241
           H E W+V  +    Q+  PS G
Sbjct: 225 HVEHWNVPKIALFKQLLRPSRG 234

[Close]

BLAST of Spg003523 vs. TAIR 10
Match: AT2G46100.2 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 45.1 bits (105), Expect = 9.6e-05
Identity = 18/46 (39.13%), Postives = 28/46 (60.87%), Query Frame = 0


Query: 99  VLNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIRFRGKELYSRN 145
           V++ +K D++ +YFVTG  T  +Y + C F DP   F+G   + RN
Sbjct: 105 VVDSIKQDFKRSYFVTGNLTPEVYEEKCEFADPAGSFKGLARFKRN 150

The following BLAST results are available for this feature:

BLAST of Spg003523 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946926.1	6.7e-101	85.96	uncharacterized protein LOC111450860 [Cucurbita moschata]	[more]
XP_023545588.1	1.1e-100	85.53	uncharacterized protein LOC111804973 [Cucurbita pepo subsp. pepo]	[more]
KAG6599294.1	1.5e-100	85.53	hypothetical protein SDJN03_09072, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022999247.1	5.7e-100	85.09	uncharacterized protein LOC111493675 [Cucurbita maxima]	[more]
XP_004139222.1	6.3e-99	83.56	uncharacterized protein LOC101220191 isoform X1 [Cucumis sativus] >KGN60827.1 hy...	[more]

BLAST of Spg003523 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg003523 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G4Y1	3.2e-101	85.96	uncharacterized protein LOC111450860 OS=Cucurbita moschata OX=3662 GN=LOC1114508...	[more]
A0A6J1KAD4	2.7e-100	85.09	uncharacterized protein LOC111493675 OS=Cucurbita maxima OX=3661 GN=LOC111493675...	[more]
A0A0A0LJD8	3.0e-99	83.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G011600 PE=4 SV=1	[more]
A0A1S3C2Z9	1.5e-93	78.95	uncharacterized protein LOC103495870 OS=Cucumis melo OX=3656 GN=LOC103495870 PE=...	[more]
A0A6J1CMH1	2.6e-90	71.71	uncharacterized protein LOC111012984 isoform X5 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Spg003523 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04890.1	1.5e-58	59.00	Uncharacterized conserved protein (DUF2358)	[more]
AT3G04890.2	4.4e-50	57.47	Uncharacterized conserved protein (DUF2358)	[more]
AT2G46100.1	2.3e-14	28.17	Nuclear transport factor 2 (NTF2) family protein	[more]
AT2G46100.2	9.6e-05	39.13	Nuclear transport factor 2 (NTF2) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018790	Protein of unknown function DUF2358	PFAM	PF10184	DUF2358	coord: 98..207 e-value: 1.1E-19 score: 70.8
None	No IPR available	PANTHER	PTHR34123:SF4	PHOSPHORIBOSYLTRANSFERASE-LIKE PROTEIN, PUTATIVE (DUF2358)-RELATED	coord: 30..238
None	No IPR available	PANTHER	PTHR34123	FAMILY NOT NAMED	coord: 30..238

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg003523.1	Spg003523.1	mRNA