Spg003478 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAATCGTTTCTAAGATTCTTGTTCATTGGTACGTGAAGCACTCATATGAAGGAGGTGCTGATAGTGCTAATGATATTATCGATACAGCTTGGATGAGCATCGAAGGAGATGATGATAGTATCGATGCAGATTATCACTATACTCTAATGCCATGTCTTGATGGTGATGATGATGAGGATCCAATTTACGATTATGCTCCAGCTGCATGA ATGTCAATCGTTTCTAAGATTCTTGTTCATTGGTACGTGAAGCACTCATATGAAGGAGGTGCTGATAGTGCTAATGATATTATCGATACAGCTTGGATGAGCATCGAAGGAGATGATGATAGTATCGATGCAGATTATCACTATACTCTAATGCCATGTCTTGATGGTGATGATGATGAGGATCCAATTTACGATTATGCTCCAGCTGCATGA ATGTCAATCGTTTCTAAGATTCTTGTTCATTGGTACGTGAAGCACTCATATGAAGGAGGTGCTGATAGTGCTAATGATATTATCGATACAGCTTGGATGAGCATCGAAGGAGATGATGATAGTATCGATGCAGATTATCACTATACTCTAATGCCATGTCTTGATGGTGATGATGATGAGGATCCAATTTACGATTATGCTCCAGCTGCATGA MSIVSKILVHWYVKHSYEGGADSANDIIDTAWMSIEGDDDSIDADYHYTLMPCLDGDDDEDPIYDYAPAA Homology
BLAST of Spg003478 vs. NCBI nr
Match: MBA0744761.1 (hypothetical protein [Gossypium gossypioides]) HSP 1 Score: 56.6 bits (135), Expect = 9.9e-05 Identity = 32/70 (45.71%), Postives = 38/70 (54.29%), Query Frame = 0
BLAST of Spg003478 vs. NCBI nr
Match: OMO57935.1 (hypothetical protein COLO4_34980 [Corchorus olitorius]) HSP 1 Score: 55.8 bits (133), Expect = 1.7e-04 Identity = 34/72 (47.22%), Postives = 44/72 (61.11%), Query Frame = 0
BLAST of Spg003478 vs. NCBI nr
Match: OMO80906.1 (hypothetical protein CCACVL1_12701 [Corchorus capsularis]) HSP 1 Score: 55.5 bits (132), Expect = 2.2e-04 Identity = 34/72 (47.22%), Postives = 44/72 (61.11%), Query Frame = 0
BLAST of Spg003478 vs. NCBI nr
Match: MBA0564450.1 (hypothetical protein [Gossypium lobatum]) HSP 1 Score: 54.7 bits (130), Expect = 3.8e-04 Identity = 31/70 (44.29%), Postives = 38/70 (54.29%), Query Frame = 0
BLAST of Spg003478 vs. NCBI nr
Match: MBA0622208.1 (hypothetical protein [Gossypium davidsonii] >MBA0657694.1 hypothetical protein [Gossypium klotzschianum] >MBA0719259.1 hypothetical protein [Gossypium laxum] >MBA0866079.1 hypothetical protein [Gossypium schwendimanii]) HSP 1 Score: 54.7 bits (130), Expect = 3.8e-04 Identity = 31/70 (44.29%), Postives = 38/70 (54.29%), Query Frame = 0
BLAST of Spg003478 vs. ExPASy TrEMBL
Match: A0A7J9C8H7 (Uncharacterized protein OS=Gossypium gossypioides OX=34282 GN=Gogos_007372 PE=4 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 4.8e-05 Identity = 32/70 (45.71%), Postives = 38/70 (54.29%), Query Frame = 0
BLAST of Spg003478 vs. ExPASy TrEMBL
Match: A0A1R3GIL9 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_34980 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 8.2e-05 Identity = 34/72 (47.22%), Postives = 44/72 (61.11%), Query Frame = 0
BLAST of Spg003478 vs. ExPASy TrEMBL
Match: A0A1R3IE84 (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_12701 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 1.1e-04 Identity = 34/72 (47.22%), Postives = 44/72 (61.11%), Query Frame = 0
BLAST of Spg003478 vs. ExPASy TrEMBL
Match: A0A7J9M6P0 (Uncharacterized protein OS=Gossypium schwendimanii OX=34291 GN=Goshw_017687 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.8e-04 Identity = 31/70 (44.29%), Postives = 38/70 (54.29%), Query Frame = 0
BLAST of Spg003478 vs. ExPASy TrEMBL
Match: A0A7J9EM62 (Uncharacterized protein OS=Gossypium trilobum OX=34281 GN=Gotri_009205 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.8e-04 Identity = 31/70 (44.29%), Postives = 38/70 (54.29%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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