Spg003377 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg003377
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	PRA1 family protein
Location	scaffold4: 46248916 .. 46249557 (-)
RNA-Seq Expression	Spg003377
Synteny	Spg003377

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATCGGTCAAATTCCCCGCCGGCTACGGCGCCGTGCCCTCTCCGCCCACCGCCACAATCCCCACCACCTCCGCCACCGCTCCTCCCTCTTTCCCCTCCACTTCCTCCTTCCTCGAACGCGCCAAAACCACCACGCAATCCCTAATCGCCACACAGCGGCCATGGCGAGAGCTCTTCGATTTCTCCGCCTTCTCTCTCCCTTTAGGCTACGACGACGCCATGGCCAGAATCCGCCAGAACGTCAACTACTTCCGCGTTAATTACGCCTTGGCCATGCTCATCGTCGTCTTCTTCAGCCTGTTCTGGCACCCGATTTCGATCATCGTCTTCTTGCTCGTCTTCGTCGCTTGGTTGTTCTTCTACTTCCTTCGCGACCAGCCTCTCGTTCTCTTCAACCAGACGTTCGATGATAAAATTGTTTTGGGGGTTTTGAGCATTTTTACCATCATCGCTCTTGTTTCTACTGATGTGGGATCCAATGTTCTGGGAGCTCTGATTACAGGTGTCGTCCTCGTTGGATTGCACGCCGCCTTTCGGATTACGGCGGATCATTTTCTCGATGAGGAGAGCGCTGCGCAAGGGGGATTGCTGTCGGTTGTGGGAAATCAACAACAACAACGAGGCTACACTCGGATTTGA

mRNA sequence

ATGTCATCGGTCAAATTCCCCGCCGGCTACGGCGCCGTGCCCTCTCCGCCCACCGCCACAATCCCCACCACCTCCGCCACCGCTCCTCCCTCTTTCCCCTCCACTTCCTCCTTCCTCGAACGCGCCAAAACCACCACGCAATCCCTAATCGCCACACAGCGGCCATGGCGAGAGCTCTTCGATTTCTCCGCCTTCTCTCTCCCTTTAGGCTACGACGACGCCATGGCCAGAATCCGCCAGAACGTCAACTACTTCCGCGTTAATTACGCCTTGGCCATGCTCATCGTCGTCTTCTTCAGCCTGTTCTGGCACCCGATTTCGATCATCGTCTTCTTGCTCGTCTTCGTCGCTTGGTTGTTCTTCTACTTCCTTCGCGACCAGCCTCTCGTTCTCTTCAACCAGACGTTCGATGATAAAATTGTTTTGGGGGTTTTGAGCATTTTTACCATCATCGCTCTTGTTTCTACTGATGTGGGATCCAATGTTCTGGGAGCTCTGATTACAGGTGTCGTCCTCGTTGGATTGCACGCCGCCTTTCGGATTACGGCGGATCATTTTCTCGATGAGGAGAGCGCTGCGCAAGGGGGATTGCTGTCGGTTGTGGGAAATCAACAACAACAACGAGGCTACACTCGGATTTGA

Coding sequence (CDS)

ATGTCATCGGTCAAATTCCCCGCCGGCTACGGCGCCGTGCCCTCTCCGCCCACCGCCACAATCCCCACCACCTCCGCCACCGCTCCTCCCTCTTTCCCCTCCACTTCCTCCTTCCTCGAACGCGCCAAAACCACCACGCAATCCCTAATCGCCACACAGCGGCCATGGCGAGAGCTCTTCGATTTCTCCGCCTTCTCTCTCCCTTTAGGCTACGACGACGCCATGGCCAGAATCCGCCAGAACGTCAACTACTTCCGCGTTAATTACGCCTTGGCCATGCTCATCGTCGTCTTCTTCAGCCTGTTCTGGCACCCGATTTCGATCATCGTCTTCTTGCTCGTCTTCGTCGCTTGGTTGTTCTTCTACTTCCTTCGCGACCAGCCTCTCGTTCTCTTCAACCAGACGTTCGATGATAAAATTGTTTTGGGGGTTTTGAGCATTTTTACCATCATCGCTCTTGTTTCTACTGATGTGGGATCCAATGTTCTGGGAGCTCTGATTACAGGTGTCGTCCTCGTTGGATTGCACGCCGCCTTTCGGATTACGGCGGATCATTTTCTCGATGAGGAGAGCGCTGCGCAAGGGGGATTGCTGTCGGTTGTGGGAAATCAACAACAACAACGAGGCTACACTCGGATTTGA

Protein sequence

MSSVKFPAGYGAVPSPPTATIPTTSATAPPSFPSTSSFLERAKTTTQSLIATQRPWRELFDFSAFSLPLGYDDAMARIRQNVNYFRVNYALAMLIVVFFSLFWHPISIIVFLLVFVAWLFFYFLRDQPLVLFNQTFDDKIVLGVLSIFTIIALVSTDVGSNVLGALITGVVLVGLHAAFRITADHFLDEESAAQGGLLSVVGNQQQQRGYTRI

Homology

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BLAST of Spg003377 vs. NCBI nr
Match: KAA0063596.1 (PRA1 family protein E [Cucumis melo var. makuwa] >TYK18431.1 PRA1 family protein E [Cucumis melo var. makuwa])

HSP 1 Score: 365.5 bits (937), Expect = 3.0e-97
Identity = 193/213 (90.61%), Postives = 202/213 (94.84%), Query Frame = 0


Query: 1   MSSVKFPAGYGAVPSPPTATIPTTSATAPPSFPSTSSFLERAKTTTQSLIATQRPWRELF 60
           MSSVKF +GYGAVPSP  ATIPTTS+ APP FPS+SSFLERAKTTTQSLIATQRPWRELF
Sbjct: 1   MSSVKFSSGYGAVPSPAAATIPTTSSGAPPPFPSSSSFLERAKTTTQSLIATQRPWRELF 60

Query: 61  DFSAFSLPLGYDDAMARIRQNVNYFRVNYALAMLIVVFFSLFWHPISIIVFLLVFVAWLF 120
           DFSAFSLP  YDDAMARIRQNVNYFRVNYAL MLI+VF SLFWHPISIIVFLL+FVAWLF
Sbjct: 61  DFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVAWLF 120

Query: 121 FYFLRDQPLVLFNQTFDDKIVLGVLSIFTIIALVSTDVGSNVLGALITGVVLVGLHAAFR 180
           FYF RDQPLVLFNQTFDDK+VLGVLSIFTIIALVSTDVGSNVLGALITGV +VGLHAAFR
Sbjct: 121 FYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFR 180

Query: 181 ITADHFLDEESAAQGGLLSVVGNQQQQRGYTRI 214
           ITADHFLDEE+AA+GGLLSVVGNQQQQRGYTRI
Sbjct: 181 ITADHFLDEETAAEGGLLSVVGNQQQQRGYTRI 213

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BLAST of Spg003377 vs. NCBI nr
Match: XP_004139244.1 (PRA1 family protein E [Cucumis sativus] >KGN60794.1 hypothetical protein Csa_019504 [Cucumis sativus])

HSP 1 Score: 363.2 bits (931), Expect = 1.5e-96
Identity = 192/213 (90.14%), Postives = 202/213 (94.84%), Query Frame = 0


Query: 1   MSSVKFPAGYGAVPSPPTATIPTTSATAPPSFPSTSSFLERAKTTTQSLIATQRPWRELF 60
           MSSVKF +GYGAVPS   ATIPTTS+ APPSFPS+SSFLERAKTTTQSLIATQRPWRELF
Sbjct: 1   MSSVKFSSGYGAVPSQAAATIPTTSSGAPPSFPSSSSFLERAKTTTQSLIATQRPWRELF 60

Query: 61  DFSAFSLPLGYDDAMARIRQNVNYFRVNYALAMLIVVFFSLFWHPISIIVFLLVFVAWLF 120
           DFSAFSLP  YDDAMARIRQNVNYFRVNYAL MLI+VF SLFWHPISIIVFLL+FVAWLF
Sbjct: 61  DFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVAWLF 120

Query: 121 FYFLRDQPLVLFNQTFDDKIVLGVLSIFTIIALVSTDVGSNVLGALITGVVLVGLHAAFR 180
           FYF RDQPLVLFNQTFDDK+VLGVLSIFTIIALVSTDVGSNVLGALITGV +VGLH+AFR
Sbjct: 121 FYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVTVVGLHSAFR 180

Query: 181 ITADHFLDEESAAQGGLLSVVGNQQQQRGYTRI 214
           ITADHFLDEE+AA+GGLLSVVGNQQQQRGYTRI
Sbjct: 181 ITADHFLDEETAAEGGLLSVVGNQQQQRGYTRI 213

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BLAST of Spg003377 vs. NCBI nr
Match: XP_008456115.1 (PREDICTED: PRA1 family protein E [Cucumis melo] >XP_008456124.1 PREDICTED: PRA1 family protein E [Cucumis melo])

HSP 1 Score: 362.8 bits (930), Expect = 2.0e-96
Identity = 192/213 (90.14%), Postives = 201/213 (94.37%), Query Frame = 0


Query: 1   MSSVKFPAGYGAVPSPPTATIPTTSATAPPSFPSTSSFLERAKTTTQSLIATQRPWRELF 60
           MSSVKF +GYGAVPSP  ATIPTTS+ APP FPS+SSFLERAKTTTQSLIAT RPWRELF
Sbjct: 1   MSSVKFSSGYGAVPSPAAATIPTTSSGAPPPFPSSSSFLERAKTTTQSLIATLRPWRELF 60

Query: 61  DFSAFSLPLGYDDAMARIRQNVNYFRVNYALAMLIVVFFSLFWHPISIIVFLLVFVAWLF 120
           DFSAFSLP  YDDAMARIRQNVNYFRVNYAL MLI+VF SLFWHPISIIVFLL+FVAWLF
Sbjct: 61  DFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVAWLF 120

Query: 121 FYFLRDQPLVLFNQTFDDKIVLGVLSIFTIIALVSTDVGSNVLGALITGVVLVGLHAAFR 180
           FYF RDQPLVLFNQTFDDK+VLGVLSIFTIIALVSTDVGSNVLGALITGV +VGLHAAFR
Sbjct: 121 FYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFR 180

Query: 181 ITADHFLDEESAAQGGLLSVVGNQQQQRGYTRI 214
           ITADHFLDEE+AA+GGLLSVVGNQQQQRGYTRI
Sbjct: 181 ITADHFLDEETAAEGGLLSVVGNQQQQRGYTRI 213

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BLAST of Spg003377 vs. NCBI nr
Match: XP_038891239.1 (PRA1 family protein F3 [Benincasa hispida])

HSP 1 Score: 361.7 bits (927), Expect = 4.4e-96
Identity = 191/213 (89.67%), Postives = 199/213 (93.43%), Query Frame = 0


Query: 1   MSSVKFPAGYGAVPSPPTATIPTTSATAPPSFPSTSSFLERAKTTTQSLIATQRPWRELF 60
           MSS KF  GYGAVPSP  ATIPTTS+ APPS PS+SSFLERAK TTQSLIATQRPWRELF
Sbjct: 1   MSSAKFSTGYGAVPSPAAATIPTTSSGAPPSLPSSSSFLERAKITTQSLIATQRPWRELF 60

Query: 61  DFSAFSLPLGYDDAMARIRQNVNYFRVNYALAMLIVVFFSLFWHPISIIVFLLVFVAWLF 120
           DFSAFSLPL YDDAMARIRQNVNYFRVNYAL MLI+VFFSLFWHP SIIVFLL+FVAW F
Sbjct: 61  DFSAFSLPLNYDDAMARIRQNVNYFRVNYALVMLIIVFFSLFWHPFSIIVFLLIFVAWFF 120

Query: 121 FYFLRDQPLVLFNQTFDDKIVLGVLSIFTIIALVSTDVGSNVLGALITGVVLVGLHAAFR 180
           FYF RDQPLVLFNQTFDDK+VLGVLSIFTIIALVSTDVGSNVLGALITGV +VGLHAAFR
Sbjct: 121 FYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFR 180

Query: 181 ITADHFLDEESAAQGGLLSVVGNQQQQRGYTRI 214
           ITADHFLDEE+AA+GGLLSVVGNQQQQRGYTRI
Sbjct: 181 ITADHFLDEETAAEGGLLSVVGNQQQQRGYTRI 213

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BLAST of Spg003377 vs. NCBI nr
Match: XP_022142976.1 (PRA1 family protein E [Momordica charantia])

HSP 1 Score: 341.7 bits (875), Expect = 4.7e-90
Identity = 187/212 (88.21%), Postives = 192/212 (90.57%), Query Frame = 0


Query: 2   SSVKFPAGYGAVPSPPTATIPTTSATAPPSFPSTSSFLERAKTTTQSLIATQRPWRELFD 61
           SSVKF  GY  + SPP ATIP  SA APPS  S+SSFLERAK TTQSLIATQRPWREL D
Sbjct: 5   SSVKFSVGYSTLSSPPAATIPVISAEAPPSL-SSSSFLERAKNTTQSLIATQRPWRELLD 64

Query: 62  FSAFSLPLGYDDAMARIRQNVNYFRVNYALAMLIVVFFSLFWHPISIIVFLLVFVAWLFF 121
           FSAFSLPLGYDDAMARIRQNVNYFRVNYAL MLI+V FSLFWHPISIIVFLLVFV WLFF
Sbjct: 65  FSAFSLPLGYDDAMARIRQNVNYFRVNYALVMLIIVLFSLFWHPISIIVFLLVFVGWLFF 124

Query: 122 YFLRDQPLVLFNQTFDDKIVLGVLSIFTIIALVSTDVGSNVLGALITGVVLVGLHAAFRI 181
           YFLRD PLVLFNQTFDDKIVLGVLSI TIIALVSTDVGSNVLGALITGVV+VGLHAAFRI
Sbjct: 125 YFLRDDPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVVVVGLHAAFRI 184

Query: 182 TADHFLDEESAAQGGLLSVVGNQQQQRGYTRI 214
           TADHFLDEE+AA GGLLSVVGNQQ QRGYTRI
Sbjct: 185 TADHFLDEETAAGGGLLSVVGNQQPQRGYTRI 215

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BLAST of Spg003377 vs. ExPASy Swiss-Prot
Match: Q9FRR1 (PRA1 family protein E OS=Arabidopsis thaliana OX=3702 GN=PRA1E PE=1 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 9.9e-43
Identity = 102/209 (48.80%), Postives = 135/209 (64.59%), Query Frame = 0


Query: 7   PAGYGAVPSPPTATIPTTSATAPPSFPSTSSFLERAKTTTQSLIATQRPWRELFDFSAFS 66
           P GYG           T++ T         +   RAK TTQS+I T RPWRE+ D SA S
Sbjct: 7   PYGYGGAGGGGVGPSSTSNTTI------IGTLSARAKQTTQSMITTLRPWREILDLSALS 66

Query: 67  LPLGYDDAMARIRQNVNYFRVNYALAMLIVVFFSLFWHPISIIVFLLVFVAWLFFYFLRD 126
           LP GYD+AMA ++ N++YFR NYALA+L +VF  L +HP+S+I F++VF+ W+  YF RD
Sbjct: 67  LPRGYDEAMAHLKHNISYFRGNYALAVLAIVFLGLIYHPMSMIAFIVVFIGWILLYFSRD 126

Query: 127 --QPLVLFNQTFDDKIVLGVLSIFTIIALVSTDVGSNVLGALITGVVLVGLHAAFRITAD 186
               +V+  +  DDKIVL +LS+ T++ALV TDVG NVL +LI G+++VG H AFR T D
Sbjct: 127 ANDSIVISGKEVDDKIVLVLLSLVTVLALVYTDVGENVLVSLIIGLLIVGAHGAFRNTDD 186

Query: 187 HFLDEESAAQGGLLSVVGNQQQQRGYTRI 214
            FLDEESA +GGL+S     +    YT I
Sbjct: 187 LFLDEESARRGGLVSAGSGNRPPSSYTPI 209

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BLAST of Spg003377 vs. ExPASy Swiss-Prot
Match: Q9LIC6 (PRA1 family protein F3 OS=Arabidopsis thaliana OX=3702 GN=PRA1F3 PE=1 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.8e-36
Identity = 89/183 (48.63%), Postives = 121/183 (66.12%), Query Frame = 0


Query: 10  YGAVPSPPTATIPTTSATAPPSFPSTSSFLERAKTTTQSLIATQRPWRELFDFSAFSLPL 69
           YGA+P         TS+ A P     S  L RAK   ++ +AT+R WR +FDF +  LP 
Sbjct: 4   YGAIP---------TSSHASPLVDVES--LSRAKHRIKAGLATRRAWRVMFDFHSMGLPH 63

Query: 70  GYDDAMARIRQNVNYFRVNYALAMLIVVFFSLFWHPISIIVFLLVFVAWLFFYFLRDQPL 129
           G  DA  RI+ N+ YFR+NYA+ +LIV+FFSL WHP S+IVF ++ V W+F YFLRD+P+
Sbjct: 64  GVSDAFTRIKTNLAYFRMNYAIVVLIVIFFSLIWHPTSLIVFTVLVVVWIFLYFLRDEPI 123

Query: 130 VLFNQTFDDKIVLGVLSIFTIIALVSTDVGSNVLGALITGVVLVGLHAAFRITADHFLDE 189
            LF    DD+ VL VLS+ T++ L+ T+   N++GAL+TG VLV +H+  R T D FLDE
Sbjct: 124 KLFRFQIDDRTVLIVLSVLTVVLLLLTNATFNIVGALVTGAVLVLIHSVVRKTEDLFLDE 175

Query: 190 ESA 193
           E+A
Sbjct: 184 EAA 175

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BLAST of Spg003377 vs. ExPASy Swiss-Prot
Match: Q9C889 (PRA1 family protein F2 OS=Arabidopsis thaliana OX=3702 GN=PRA1F2 PE=1 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.0e-34
Identity = 85/193 (44.04%), Postives = 127/193 (65.80%), Query Frame = 0


Query: 10  YGAVPSPPTATIPTTSATAPPSFPSTSSFLERAKTTTQSLIATQRPWRELFDFSAFSLPL 69
           YGA+P+           ++ PS      ++ RAK   +S +AT+RPW+ +FDF + +LP 
Sbjct: 4   YGAIPT-----------SSHPSPAIDLEYISRAKHRIKSGLATRRPWKSMFDFESMTLPH 63

Query: 70  GYDDAMARIRQNVNYFRVNYALAMLIVVFFSLFWHPISIIVFLLVFVAWLFFYFLRDQPL 129
           G+ DA++RI+ N+ YFR NYA+ +L ++F SL +HP S+IV  ++ V W+F YFLRD+PL
Sbjct: 64  GFFDAISRIKTNLGYFRANYAIGVLFILFLSLLYHPTSLIVLSILVVFWIFLYFLRDEPL 123

Query: 130 VLFNQTFDDKIVLGVLSIFTIIALVSTDVGSNVLGALITGVVLVGLHAAFRITADHFLDE 189
           V+F    DD+ VL  LS+ T++ L+ T   SN+LG+L+T  VLV +HAA R + + FLDE
Sbjct: 124 VVFGYQIDDRTVLIGLSVLTVVMLLLTHATSNILGSLLTAAVLVLIHAAVRRSDNLFLDE 183

Query: 190 ESAA---QGGLLS 200
           E+AA     GL+S
Sbjct: 184 EAAAVTEASGLMS 185

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BLAST of Spg003377 vs. ExPASy Swiss-Prot
Match: Q9LIC7 (PRA1 family protein F4 OS=Arabidopsis thaliana OX=3702 GN=PRA1F4 PE=2 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.5e-30
Identity = 80/170 (47.06%), Postives = 108/170 (63.53%), Query Frame = 0


Query: 23  TTSATAPPSFPSTSSFLERAKTTTQSLIATQRPWRELFDFSAFSLPLGYDDAMARIRQNV 82
           TTS+ A P+    S  + RAK   +  +AT+R WR +FD  +  LP G  D  +RI+ N+
Sbjct: 8   TTSSHASPAVNHES--ISRAKQRIKDGLATRRSWRVMFDLHSTGLPHGVSDVFSRIKTNL 67

Query: 83  NYFRVNYALAMLIVVFFSLFWHPISIIVFLLVFVAWLFFYFLRDQPLVLFNQTFDDKIVL 142
            YFR NYA+ +L V+FFSL WHP S+IVF  +   W+F YFLRD PL +F    DD+ VL
Sbjct: 68  AYFRSNYAIVILNVIFFSLIWHPTSLIVFTGLVFLWIFLYFLRDVPLKVFRFQIDDRAVL 127

Query: 143 GVLSIFTIIALVSTDVGSNVLGALITGVVLVGLHAAFRITADHFLDEESA 193
             LS+ TI+ L+ T+   N++ AL+ G VLV +HA  R T D FLDEE+A
Sbjct: 128 IGLSVITIVLLLLTNATFNIVAALMAGAVLVLIHAVIRKTDDLFLDEEAA 175

[Close]

BLAST of Spg003377 vs. ExPASy Swiss-Prot
Match: Q9FLB6 (PRA1 family protein B3 OS=Arabidopsis thaliana OX=3702 GN=PRA1B3 PE=1 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 4.8e-29
Identity = 83/192 (43.23%), Postives = 115/192 (59.90%), Query Frame = 0


Query: 15  SPPTATIPTTS-----ATAPPSFPSTSSFLERAKTTTQSLIATQRPWRELFDFSAFSLPL 74
           +PPT  I   S     +  P S P+  +FL R  ++ +  ++ +RPW EL D SA S P 
Sbjct: 4   NPPTLPISDHSGGGSQSQQPVSTPAFRTFLSRLSSSIRQSLSQRRPWLELVDRSAISRPE 63

Query: 75  GYDDAMARIRQNVNYFRVNYALAMLIVVFFSLFWHPISIIVFLLVFVAWLFFYFLR--DQ 134
              DA +RIR+N+ YF+VNY   + +V+  SL  HP S++V L +F AW+F Y  R  DQ
Sbjct: 64  SLTDAYSRIRRNLPYFKVNYVTIVSLVLALSLLSHPFSLLVLLCLFCAWIFLYLFRPSDQ 123

Query: 135 PLVLFNQTFDDKIVLGVLSIFTIIALVSTDVGSNVLGALITGVVLVGLHAAFRITADHFL 194
           PLV+  +TF D+  LGVL I TI+ +  T VGS +  AL+ G  +V LH AFR+  D FL
Sbjct: 124 PLVVLGRTFSDRETLGVLVILTIVVVFLTSVGSLLTSALMIGFGIVCLHGAFRVPEDLFL 183

Query: 195 DEESAAQGGLLS 200
           D++  A  GLLS
Sbjct: 184 DDQEPANTGLLS 195

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BLAST of Spg003377 vs. ExPASy TrEMBL
Match: A0A5A7VAZ9 (PRA1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001570 PE=3 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.5e-97
Identity = 193/213 (90.61%), Postives = 202/213 (94.84%), Query Frame = 0


Query: 1   MSSVKFPAGYGAVPSPPTATIPTTSATAPPSFPSTSSFLERAKTTTQSLIATQRPWRELF 60
           MSSVKF +GYGAVPSP  ATIPTTS+ APP FPS+SSFLERAKTTTQSLIATQRPWRELF
Sbjct: 1   MSSVKFSSGYGAVPSPAAATIPTTSSGAPPPFPSSSSFLERAKTTTQSLIATQRPWRELF 60

Query: 61  DFSAFSLPLGYDDAMARIRQNVNYFRVNYALAMLIVVFFSLFWHPISIIVFLLVFVAWLF 120
           DFSAFSLP  YDDAMARIRQNVNYFRVNYAL MLI+VF SLFWHPISIIVFLL+FVAWLF
Sbjct: 61  DFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVAWLF 120

Query: 121 FYFLRDQPLVLFNQTFDDKIVLGVLSIFTIIALVSTDVGSNVLGALITGVVLVGLHAAFR 180
           FYF RDQPLVLFNQTFDDK+VLGVLSIFTIIALVSTDVGSNVLGALITGV +VGLHAAFR
Sbjct: 121 FYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFR 180

Query: 181 ITADHFLDEESAAQGGLLSVVGNQQQQRGYTRI 214
           ITADHFLDEE+AA+GGLLSVVGNQQQQRGYTRI
Sbjct: 181 ITADHFLDEETAAEGGLLSVVGNQQQQRGYTRI 213

[Close]

BLAST of Spg003377 vs. ExPASy TrEMBL
Match: A0A0A0LIB9 (PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_2G010300 PE=3 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 7.3e-97
Identity = 192/213 (90.14%), Postives = 202/213 (94.84%), Query Frame = 0


Query: 1   MSSVKFPAGYGAVPSPPTATIPTTSATAPPSFPSTSSFLERAKTTTQSLIATQRPWRELF 60
           MSSVKF +GYGAVPS   ATIPTTS+ APPSFPS+SSFLERAKTTTQSLIATQRPWRELF
Sbjct: 1   MSSVKFSSGYGAVPSQAAATIPTTSSGAPPSFPSSSSFLERAKTTTQSLIATQRPWRELF 60

Query: 61  DFSAFSLPLGYDDAMARIRQNVNYFRVNYALAMLIVVFFSLFWHPISIIVFLLVFVAWLF 120
           DFSAFSLP  YDDAMARIRQNVNYFRVNYAL MLI+VF SLFWHPISIIVFLL+FVAWLF
Sbjct: 61  DFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVAWLF 120

Query: 121 FYFLRDQPLVLFNQTFDDKIVLGVLSIFTIIALVSTDVGSNVLGALITGVVLVGLHAAFR 180
           FYF RDQPLVLFNQTFDDK+VLGVLSIFTIIALVSTDVGSNVLGALITGV +VGLH+AFR
Sbjct: 121 FYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVTVVGLHSAFR 180

Query: 181 ITADHFLDEESAAQGGLLSVVGNQQQQRGYTRI 214
           ITADHFLDEE+AA+GGLLSVVGNQQQQRGYTRI
Sbjct: 181 ITADHFLDEETAAEGGLLSVVGNQQQQRGYTRI 213

[Close]

BLAST of Spg003377 vs. ExPASy TrEMBL
Match: A0A1S3C2L3 (PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103496149 PE=3 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 9.5e-97
Identity = 192/213 (90.14%), Postives = 201/213 (94.37%), Query Frame = 0


Query: 1   MSSVKFPAGYGAVPSPPTATIPTTSATAPPSFPSTSSFLERAKTTTQSLIATQRPWRELF 60
           MSSVKF +GYGAVPSP  ATIPTTS+ APP FPS+SSFLERAKTTTQSLIAT RPWRELF
Sbjct: 1   MSSVKFSSGYGAVPSPAAATIPTTSSGAPPPFPSSSSFLERAKTTTQSLIATLRPWRELF 60

Query: 61  DFSAFSLPLGYDDAMARIRQNVNYFRVNYALAMLIVVFFSLFWHPISIIVFLLVFVAWLF 120
           DFSAFSLP  YDDAMARIRQNVNYFRVNYAL MLI+VF SLFWHPISIIVFLL+FVAWLF
Sbjct: 61  DFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVAWLF 120

Query: 121 FYFLRDQPLVLFNQTFDDKIVLGVLSIFTIIALVSTDVGSNVLGALITGVVLVGLHAAFR 180
           FYF RDQPLVLFNQTFDDK+VLGVLSIFTIIALVSTDVGSNVLGALITGV +VGLHAAFR
Sbjct: 121 FYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFR 180

Query: 181 ITADHFLDEESAAQGGLLSVVGNQQQQRGYTRI 214
           ITADHFLDEE+AA+GGLLSVVGNQQQQRGYTRI
Sbjct: 181 ITADHFLDEETAAEGGLLSVVGNQQQQRGYTRI 213

[Close]

BLAST of Spg003377 vs. ExPASy TrEMBL
Match: A0A6J1CNT6 (PRA1 family protein OS=Momordica charantia OX=3673 GN=LOC111012974 PE=3 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 2.3e-90
Identity = 187/212 (88.21%), Postives = 192/212 (90.57%), Query Frame = 0


Query: 2   SSVKFPAGYGAVPSPPTATIPTTSATAPPSFPSTSSFLERAKTTTQSLIATQRPWRELFD 61
           SSVKF  GY  + SPP ATIP  SA APPS  S+SSFLERAK TTQSLIATQRPWREL D
Sbjct: 5   SSVKFSVGYSTLSSPPAATIPVISAEAPPSL-SSSSFLERAKNTTQSLIATQRPWRELLD 64

Query: 62  FSAFSLPLGYDDAMARIRQNVNYFRVNYALAMLIVVFFSLFWHPISIIVFLLVFVAWLFF 121
           FSAFSLPLGYDDAMARIRQNVNYFRVNYAL MLI+V FSLFWHPISIIVFLLVFV WLFF
Sbjct: 65  FSAFSLPLGYDDAMARIRQNVNYFRVNYALVMLIIVLFSLFWHPISIIVFLLVFVGWLFF 124

Query: 122 YFLRDQPLVLFNQTFDDKIVLGVLSIFTIIALVSTDVGSNVLGALITGVVLVGLHAAFRI 181
           YFLRD PLVLFNQTFDDKIVLGVLSI TIIALVSTDVGSNVLGALITGVV+VGLHAAFRI
Sbjct: 125 YFLRDDPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVVVVGLHAAFRI 184

Query: 182 TADHFLDEESAAQGGLLSVVGNQQQQRGYTRI 214
           TADHFLDEE+AA GGLLSVVGNQQ QRGYTRI
Sbjct: 185 TADHFLDEETAAGGGLLSVVGNQQPQRGYTRI 215

[Close]

BLAST of Spg003377 vs. ExPASy TrEMBL
Match: A0A6J1G2T7 (PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111450303 PE=3 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 1.2e-88
Identity = 184/214 (85.98%), Postives = 194/214 (90.65%), Query Frame = 0


Query: 1   MSSVKFPAGYGAVPSPPTATIPTTSATAPPSFPSTSSFLERAKTTTQSLIATQRPWRELF 60
           MS VKF AGYG VPSP      +TSA  PPSFPS+SSFLERAK+TTQSLIAT+RPWRELF
Sbjct: 1   MSPVKFSAGYGTVPSPAA----STSAGVPPSFPSSSSFLERAKSTTQSLIATRRPWRELF 60

Query: 61  DFSAFSLPLGYDDAMARIRQNVNYFRVNYALAMLIVVFFSLFWHPISIIVFLLVFVAWLF 120
           DFSAFSLP  YDDAMARIRQNV+YFRVNYAL MLI+VF SLFWHPISIIVFLL+FV WLF
Sbjct: 61  DFSAFSLPFSYDDAMARIRQNVDYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVGWLF 120

Query: 121 FYFLRDQPLVLFNQTFDDKIVLGVLSIFTIIALVSTDVGSNVLGALITGVVLVGLHAAFR 180
            YFLRDQPLVLFNQTFDDKIVLGVLSI TIIALVSTDVGSNVLGALITGV +VGLHAAFR
Sbjct: 121 CYFLRDQPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVAVVGLHAAFR 180

Query: 181 ITADHFLDEESAAQGGLLSVVGN-QQQQRGYTRI 214
           ITADHFLDEE+AA+GGLLSVVGN QQQQRGYTRI
Sbjct: 181 ITADHFLDEETAAEGGLLSVVGNQQQQQRGYTRI 210

[Close]

BLAST of Spg003377 vs. TAIR 10
Match: AT1G08770.1 (prenylated RAB acceptor 1.E )

HSP 1 Score: 174.9 bits (442), Expect = 7.1e-44
Identity = 102/209 (48.80%), Postives = 135/209 (64.59%), Query Frame = 0


Query: 7   PAGYGAVPSPPTATIPTTSATAPPSFPSTSSFLERAKTTTQSLIATQRPWRELFDFSAFS 66
           P GYG           T++ T         +   RAK TTQS+I T RPWRE+ D SA S
Sbjct: 7   PYGYGGAGGGGVGPSSTSNTTI------IGTLSARAKQTTQSMITTLRPWREILDLSALS 66

Query: 67  LPLGYDDAMARIRQNVNYFRVNYALAMLIVVFFSLFWHPISIIVFLLVFVAWLFFYFLRD 126
           LP GYD+AMA ++ N++YFR NYALA+L +VF  L +HP+S+I F++VF+ W+  YF RD
Sbjct: 67  LPRGYDEAMAHLKHNISYFRGNYALAVLAIVFLGLIYHPMSMIAFIVVFIGWILLYFSRD 126

Query: 127 --QPLVLFNQTFDDKIVLGVLSIFTIIALVSTDVGSNVLGALITGVVLVGLHAAFRITAD 186
               +V+  +  DDKIVL +LS+ T++ALV TDVG NVL +LI G+++VG H AFR T D
Sbjct: 127 ANDSIVISGKEVDDKIVLVLLSLVTVLALVYTDVGENVLVSLIIGLLIVGAHGAFRNTDD 186

Query: 187 HFLDEESAAQGGLLSVVGNQQQQRGYTRI 214
            FLDEESA +GGL+S     +    YT I
Sbjct: 187 LFLDEESARRGGLVSAGSGNRPPSSYTPI 209

[Close]

BLAST of Spg003377 vs. TAIR 10
Match: AT3G13720.1 (PRA1 (Prenylated rab acceptor) family protein )

HSP 1 Score: 154.1 bits (388), Expect = 1.3e-37
Identity = 89/183 (48.63%), Postives = 121/183 (66.12%), Query Frame = 0


Query: 10  YGAVPSPPTATIPTTSATAPPSFPSTSSFLERAKTTTQSLIATQRPWRELFDFSAFSLPL 69
           YGA+P         TS+ A P     S  L RAK   ++ +AT+R WR +FDF +  LP 
Sbjct: 4   YGAIP---------TSSHASPLVDVES--LSRAKHRIKAGLATRRAWRVMFDFHSMGLPH 63

Query: 70  GYDDAMARIRQNVNYFRVNYALAMLIVVFFSLFWHPISIIVFLLVFVAWLFFYFLRDQPL 129
           G  DA  RI+ N+ YFR+NYA+ +LIV+FFSL WHP S+IVF ++ V W+F YFLRD+P+
Sbjct: 64  GVSDAFTRIKTNLAYFRMNYAIVVLIVIFFSLIWHPTSLIVFTVLVVVWIFLYFLRDEPI 123

Query: 130 VLFNQTFDDKIVLGVLSIFTIIALVSTDVGSNVLGALITGVVLVGLHAAFRITADHFLDE 189
            LF    DD+ VL VLS+ T++ L+ T+   N++GAL+TG VLV +H+  R T D FLDE
Sbjct: 124 KLFRFQIDDRTVLIVLSVLTVVLLLLTNATFNIVGALVTGAVLVLIHSVVRKTEDLFLDE 175

Query: 190 ESA 193
           E+A
Sbjct: 184 EAA 175

[Close]

BLAST of Spg003377 vs. TAIR 10
Match: AT1G55190.1 (PRA1 (Prenylated rab acceptor) family protein )

HSP 1 Score: 148.3 bits (373), Expect = 7.1e-36
Identity = 85/193 (44.04%), Postives = 127/193 (65.80%), Query Frame = 0


Query: 10  YGAVPSPPTATIPTTSATAPPSFPSTSSFLERAKTTTQSLIATQRPWRELFDFSAFSLPL 69
           YGA+P+           ++ PS      ++ RAK   +S +AT+RPW+ +FDF + +LP 
Sbjct: 4   YGAIPT-----------SSHPSPAIDLEYISRAKHRIKSGLATRRPWKSMFDFESMTLPH 63

Query: 70  GYDDAMARIRQNVNYFRVNYALAMLIVVFFSLFWHPISIIVFLLVFVAWLFFYFLRDQPL 129
           G+ DA++RI+ N+ YFR NYA+ +L ++F SL +HP S+IV  ++ V W+F YFLRD+PL
Sbjct: 64  GFFDAISRIKTNLGYFRANYAIGVLFILFLSLLYHPTSLIVLSILVVFWIFLYFLRDEPL 123

Query: 130 VLFNQTFDDKIVLGVLSIFTIIALVSTDVGSNVLGALITGVVLVGLHAAFRITADHFLDE 189
           V+F    DD+ VL  LS+ T++ L+ T   SN+LG+L+T  VLV +HAA R + + FLDE
Sbjct: 124 VVFGYQIDDRTVLIGLSVLTVVMLLLTHATSNILGSLLTAAVLVLIHAAVRRSDNLFLDE 183

Query: 190 ESAA---QGGLLS 200
           E+AA     GL+S
Sbjct: 184 EAAAVTEASGLMS 185

[Close]

BLAST of Spg003377 vs. TAIR 10
Match: AT3G13710.1 (prenylated RAB acceptor 1.F4 )

HSP 1 Score: 133.7 bits (335), Expect = 1.8e-31
Identity = 80/170 (47.06%), Postives = 108/170 (63.53%), Query Frame = 0


Query: 23  TTSATAPPSFPSTSSFLERAKTTTQSLIATQRPWRELFDFSAFSLPLGYDDAMARIRQNV 82
           TTS+ A P+    S  + RAK   +  +AT+R WR +FD  +  LP G  D  +RI+ N+
Sbjct: 8   TTSSHASPAVNHES--ISRAKQRIKDGLATRRSWRVMFDLHSTGLPHGVSDVFSRIKTNL 67

Query: 83  NYFRVNYALAMLIVVFFSLFWHPISIIVFLLVFVAWLFFYFLRDQPLVLFNQTFDDKIVL 142
            YFR NYA+ +L V+FFSL WHP S+IVF  +   W+F YFLRD PL +F    DD+ VL
Sbjct: 68  AYFRSNYAIVILNVIFFSLIWHPTSLIVFTGLVFLWIFLYFLRDVPLKVFRFQIDDRAVL 127

Query: 143 GVLSIFTIIALVSTDVGSNVLGALITGVVLVGLHAAFRITADHFLDEESA 193
             LS+ TI+ L+ T+   N++ AL+ G VLV +HA  R T D FLDEE+A
Sbjct: 128 IGLSVITIVLLLLTNATFNIVAALMAGAVLVLIHAVIRKTDDLFLDEEAA 175

[Close]

BLAST of Spg003377 vs. TAIR 10
Match: AT5G05380.1 (prenylated RAB acceptor 1.B3 )

HSP 1 Score: 129.4 bits (324), Expect = 3.4e-30
Identity = 83/192 (43.23%), Postives = 115/192 (59.90%), Query Frame = 0


Query: 15  SPPTATIPTTS-----ATAPPSFPSTSSFLERAKTTTQSLIATQRPWRELFDFSAFSLPL 74
           +PPT  I   S     +  P S P+  +FL R  ++ +  ++ +RPW EL D SA S P 
Sbjct: 4   NPPTLPISDHSGGGSQSQQPVSTPAFRTFLSRLSSSIRQSLSQRRPWLELVDRSAISRPE 63

Query: 75  GYDDAMARIRQNVNYFRVNYALAMLIVVFFSLFWHPISIIVFLLVFVAWLFFYFLR--DQ 134
              DA +RIR+N+ YF+VNY   + +V+  SL  HP S++V L +F AW+F Y  R  DQ
Sbjct: 64  SLTDAYSRIRRNLPYFKVNYVTIVSLVLALSLLSHPFSLLVLLCLFCAWIFLYLFRPSDQ 123

Query: 135 PLVLFNQTFDDKIVLGVLSIFTIIALVSTDVGSNVLGALITGVVLVGLHAAFRITADHFL 194
           PLV+  +TF D+  LGVL I TI+ +  T VGS +  AL+ G  +V LH AFR+  D FL
Sbjct: 124 PLVVLGRTFSDRETLGVLVILTIVVVFLTSVGSLLTSALMIGFGIVCLHGAFRVPEDLFL 183

Query: 195 DEESAAQGGLLS 200
           D++  A  GLLS
Sbjct: 184 DDQEPANTGLLS 195

The following BLAST results are available for this feature:

BLAST of Spg003377 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0063596.1	3.0e-97	90.61	PRA1 family protein E [Cucumis melo var. makuwa] >TYK18431.1 PRA1 family protein...	[more]
XP_004139244.1	1.5e-96	90.14	PRA1 family protein E [Cucumis sativus] >KGN60794.1 hypothetical protein Csa_019...	[more]
XP_008456115.1	2.0e-96	90.14	PREDICTED: PRA1 family protein E [Cucumis melo] >XP_008456124.1 PREDICTED: PRA1 ...	[more]
XP_038891239.1	4.4e-96	89.67	PRA1 family protein F3 [Benincasa hispida]	[more]
XP_022142976.1	4.7e-90	88.21	PRA1 family protein E [Momordica charantia]	[more]

BLAST of Spg003377 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FRR1	9.9e-43	48.80	PRA1 family protein E OS=Arabidopsis thaliana OX=3702 GN=PRA1E PE=1 SV=1	[more]
Q9LIC6	1.8e-36	48.63	PRA1 family protein F3 OS=Arabidopsis thaliana OX=3702 GN=PRA1F3 PE=1 SV=1	[more]
Q9C889	1.0e-34	44.04	PRA1 family protein F2 OS=Arabidopsis thaliana OX=3702 GN=PRA1F2 PE=1 SV=1	[more]
Q9LIC7	2.5e-30	47.06	PRA1 family protein F4 OS=Arabidopsis thaliana OX=3702 GN=PRA1F4 PE=2 SV=1	[more]
Q9FLB6	4.8e-29	43.23	PRA1 family protein B3 OS=Arabidopsis thaliana OX=3702 GN=PRA1B3 PE=1 SV=1	[more]

BLAST of Spg003377 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VAZ9	1.5e-97	90.61	PRA1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G...	[more]
A0A0A0LIB9	7.3e-97	90.14	PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_2G010300 PE=3 SV=1	[more]
A0A1S3C2L3	9.5e-97	90.14	PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103496149 PE=3 SV=1	[more]
A0A6J1CNT6	2.3e-90	88.21	PRA1 family protein OS=Momordica charantia OX=3673 GN=LOC111012974 PE=3 SV=1	[more]
A0A6J1G2T7	1.2e-88	85.98	PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111450303 PE=3 SV=1	[more]

BLAST of Spg003377 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08770.1	7.1e-44	48.80	prenylated RAB acceptor 1.E	[more]
AT3G13720.1	1.3e-37	48.63	PRA1 (Prenylated rab acceptor) family protein	[more]
AT1G55190.1	7.1e-36	44.04	PRA1 (Prenylated rab acceptor) family protein	[more]
AT3G13710.1	1.8e-31	47.06	prenylated RAB acceptor 1.F4	[more]
AT5G05380.1	3.4e-30	43.23	prenylated RAB acceptor 1.B3	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004895	Prenylated rab acceptor PRA1	PFAM	PF03208	PRA1	coord: 50..190 e-value: 4.8E-46 score: 155.9
IPR004895	Prenylated rab acceptor PRA1	PANTHER	PTHR19317	PRENYLATED RAB ACCEPTOR 1-RELATED	coord: 7..203
None	No IPR available	PANTHER	PTHR19317:SF16	PRA1 FAMILY PROTEIN E	coord: 7..203

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg003377.1	Spg003377.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane