
Spg003121 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGCAGCATCAGGCTTTAGAAGGAGAATGTAACCGCCTAGCTAATCAAGTTGCGGAGGCTGAAGGGTTGAGGCAGGAGTATGACCTTCTAACACAAAACTATGAGGATACCCAAGGTTGTTTAGCAGAGGTCATAAGAATATTCAGGATCATGGCAACAAAGGCAGAGGTGCTTTTTGAAGAAGCCCGAGGATTAAAATGAGGAGTCATCCCAACGCAGCCAAACGGATAGCAACTTGGCAGGTTTCTCGAATACTTATGCGAAGAATTAGGCTACTTAAGACGTTTTTATTGAGTTCACATTAATCTTTCGTACTTTTGTAAGGGAGTGATCGTACTTTCAATATGTAAACCCTTTTGACAAAACAATATTTCTCAATGAAGTTAATTGTTCTTATCTTGCCTTTTATTAAGTTTGGTTTGCCCTCAGTTCCTCTTTTCTCGTCTAGTTTTTTTTTCTCCTTTTCCCATTTGGTGACAAATCTCTCCCATCCTGAAGGATAATTATAGCACATTATTCAAAATAGCCCGACGATCACGAGCTCGACATCCTTACTTCACAAGGGCGCAACGCAAAATCATGGAAGATCAGAATAACGAACAAGTTCAAGATCTAAAGCAGGATGTTGAAATACTAAAGGAGCAAGTAACTAAGCTGATTGAGTTATTGTCAACCAGCAAAGGAAAAACAGTCATCGATTCACCACCGCCTACGCGGGATTCACTAGGTTCCCAATCAAATGAGTCTCCTTTATATCCACCAGGATTCACCCCTCCAGGCCACCATGCAGAGAAGTATAATTCTTCTATGGCACACCCATCGACAACCACCCATAATATCCCTCACTTGGAGAGATTGGGAGGCCAACCACATGATCCTATCTTTGTGCCTGTGGAGGGTTCATCAGCAAGAAAAAAAATTAGATTGTCTTGAAGAGAGGTTGCGGGCGATAGAAGGAGCTAATGTTTATGGTAATATAGATGCAATCGAGCTATGCTTAATCACTGATGTAGTCATCCCACTAAAGTTCAAAGTACCTGACTTTGAGAAATTCGATGGGACATCATGTCCGAAAGCTCATCTTGTGATGTATTGTAGAAAAACGGGTGCCTACTCCCAAGATGATAAACTTCTCATACATTGCTTTCAGGATAGTCTTGTTGGTTCTGCATCCCGTTGGTACGTAAAGTTGGATGGAGGACATATACAAAAATGGAAAGATTTGGCGGACGCTTTTTTGAAGCAATACAAGCACAATATTGATATGGCCCCTGATCGTCTTGACTTGCAAAGAATGGAAAAGAAAATCACGGAGAGCTTTAAGGAATATGCACAGCGATGGAGGGAAGTTGCAGCACAAGTCCAACCACCTTTGACTGATAAAGAGATAGCAGCTACATTCATCAATACCTTGCAGTCCCCATATTATGATCGTATGATTGGGAATGCTTCTACGAACTTCTCTGATATCATCTTGATTAGTGAGAGAATAGAGTTTGGAGTAGAATTTGGACGAATCAACGAAGTTGAAATTTCTAGTGCAAAAAAGGGCCAAATGCAAAAGAAGAAAGAAGGAGAAGTTCATGAAGTACATCATGCACAGTCTTCTACTGGAAGAGCTAAGATTCCAAATGAGAAGAGGGTGCAGTCAACACAACATGATTCCCCTTATGTGAATAATGCTTATGGGGCTTTGTATTCCTCACAACTCGTCTTTCCTTACACCTCCAAGACAGGACCTGGATATCAAGCTCGTCATCAAAGCGCTCAGGGTTCCACTTTTGAACCTAATCAAAGGGCACCTAGAAACAATCAAAGGCAGGTCCAGTATGACCCAATACCCATGTCGTATACAGATCTTCTCCCACAACTCATAAAGAGTCATCAGATTGCACCTGTGCCATCAGAGCCTATACAACCACCGTACCCTAAGTGGTATGATCCTAATGCTCGTTACGATTACCATGCTGGGGTAATTGGACATTCCACAGAAAATCGTGTGTCTTTAAAGAACAAGGTGCAATCGTTAATTAAGGCAAGCTGGTTAAACTTCAAAAAGGATGGGGAAGGACCAAATGTTAATAATAATCCTTTACTAGATCACAGAAATCTCAATGTAAATGCCATTGAGGATTCAGCGGGGTATGAAGCTTTGAGTTTGGAGGATATCACTATGACGATGGAAGAACTATACGACATTTTGGAAAAGACAGGGTACATTCATCTGACACCTCTTAATAGGTTAGAAAAGGGTCTAAGAGAAAACTCTATGGAAGTCTGTATGTTTCATGCTGGGGCAATAGGGCATTCCGTCCAAAATTGTGACCATTTCAAGGAAGAAGTAAGAAGGCTAATGAGAGACAATTGGTTGATTATTGGAAGAAACAAATTTGGGCAGGTCGCATAAGACAAAGGTTACTCCTTGAATCTAGTAGAGGATGATCCTACAGTTGAAGTAAAGGGGTTACCACCAGCATCTCTCTTCATTCCAACACAACTGAGTAAATCGTTCCTTCACAGGTTGTTCGTAGCTATAGCTAGGTCAAATAACCGTTTCACCCCTATAGTACTTCTTGTTCCTTAAGTTCCACTAATCCTCTAATGAACAATCGGTTTGCGGTCCAACCATCAAACCTAAGTCCCTCTCGATCTAACAAAAGGGTGGGGCCCCTTGTTCAAGTCCTGGAGTTAGTACTTAAGGGAACAACCTATCTACTAACCCTGAAAAGGGTAGGAGTGAATTCCGTCTTGCGAAACTATGTCCCCAGCTATCTATTCGATCTTATCCCCAAAATGGTAGGCTTGTCGAGTCGGCGATGCTGGCCACTCTCACCCATGCAGATCAAAGGATAATCTCGCATAAACAGGAGTTCATAGATAGCTCAGGATTAAGAACGAGTTACCTAGGTCATCTATGA ATGTTGCAGCATCAGGCTTTAGAAGGAGAATGTAACCGCCTAGCTAATCAAGTTGCGGAGGCTGAAGGGTTGAGGCAGGAGTATGACCTTCTAACACAAAACTATGAGGATACCCAAGGTTGTTTAGCAGAGGTCATAAGAATATTCAGGATCATGGCAACAAAGGCAGAGGATAATTATAGCACATTATTCAAAATAGCCCGACGATCACGAGCTCGACATCCTTACTTCACAAGGGCGCAACGCAAAATCATGGAAGATCAGAATAACGAACAAGTTCAAGATCTAAAGCAGGATGTTGAAATACTAAAGGAGCAAGTAACTAAGCTGATTGAGTTATTGTCAACCAGCAAAGGAAAAACAGTCATCGATTCACCACCGCCTACGCGGGATTCACTAGGTTCCCAATCAAATGAGTCTCCTTTATATCCACCAGGATTCACCCCTCCAGGCCACCATGCAGAGAAGGTGCAGTCAACACAACATGATTCCCCTTATGTGAATAATGCTTATGGGGCTTTGTATTCCTCACAACTCGTCTTTCCTTACACCTCCAAGACAGGACCTGGATATCAAGCTCGTCATCAAAGCGCTCAGGTAGAGGATGATCCTACAGTTGAAGTAAAGGGGTTACCACCAGCATCTCTCTTCATTCCAACACAACTGAGTAAATCGTTCCTTCACAGGAGTGAATTCCGTCTTGCGAAACTATGTCCCCAGCTATCTATTCGATCTTATCCCCAAAATGGTAGGCTTGTCGAGTCGGCGATGCTGGCCACTCTCACCCATGCAGATCAAAGGATAATCTCGCATAAACAGGAGTTCATAGATAGCTCAGGATTAAGAACGAGTTACCTAGGTCATCTATGA ATGTTGCAGCATCAGGCTTTAGAAGGAGAATGTAACCGCCTAGCTAATCAAGTTGCGGAGGCTGAAGGGTTGAGGCAGGAGTATGACCTTCTAACACAAAACTATGAGGATACCCAAGGTTGTTTAGCAGAGGTCATAAGAATATTCAGGATCATGGCAACAAAGGCAGAGGATAATTATAGCACATTATTCAAAATAGCCCGACGATCACGAGCTCGACATCCTTACTTCACAAGGGCGCAACGCAAAATCATGGAAGATCAGAATAACGAACAAGTTCAAGATCTAAAGCAGGATGTTGAAATACTAAAGGAGCAAGTAACTAAGCTGATTGAGTTATTGTCAACCAGCAAAGGAAAAACAGTCATCGATTCACCACCGCCTACGCGGGATTCACTAGGTTCCCAATCAAATGAGTCTCCTTTATATCCACCAGGATTCACCCCTCCAGGCCACCATGCAGAGAAGGTGCAGTCAACACAACATGATTCCCCTTATGTGAATAATGCTTATGGGGCTTTGTATTCCTCACAACTCGTCTTTCCTTACACCTCCAAGACAGGACCTGGATATCAAGCTCGTCATCAAAGCGCTCAGGTAGAGGATGATCCTACAGTTGAAGTAAAGGGGTTACCACCAGCATCTCTCTTCATTCCAACACAACTGAGTAAATCGTTCCTTCACAGGAGTGAATTCCGTCTTGCGAAACTATGTCCCCAGCTATCTATTCGATCTTATCCCCAAAATGGTAGGCTTGTCGAGTCGGCGATGCTGGCCACTCTCACCCATGCAGATCAAAGGATAATCTCGCATAAACAGGAGTTCATAGATAGCTCAGGATTAAGAACGAGTTACCTAGGTCATCTATGA MLQHQALEGECNRLANQVAEAEGLRQEYDLLTQNYEDTQGCLAEVIRIFRIMATKAEDNYSTLFKIARRSRARHPYFTRAQRKIMEDQNNEQVQDLKQDVEILKEQVTKLIELLSTSKGKTVIDSPPPTRDSLGSQSNESPLYPPGFTPPGHHAEKVQSTQHDSPYVNNAYGALYSSQLVFPYTSKTGPGYQARHQSAQVEDDPTVEVKGLPPASLFIPTQLSKSFLHRSEFRLAKLCPQLSIRSYPQNGRLVESAMLATLTHADQRIISHKQEFIDSSGLRTSYLGHL Homology
BLAST of Spg003121 vs. NCBI nr
Match: KAA0060308.1 (RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein [Cucumis melo var. makuwa] >TYK22057.1 RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 73.9 bits (180), Expect = 2.5e-09 Identity = 42/102 (41.18%), Postives = 64/102 (62.75%), Query Frame = 0
BLAST of Spg003121 vs. NCBI nr
Match: KAA0036933.1 (uncharacterized protein E6C27_scaffold86G00060 [Cucumis melo var. makuwa]) HSP 1 Score: 72.4 bits (176), Expect = 7.2e-09 Identity = 42/126 (33.33%), Postives = 76/126 (60.32%), Query Frame = 0
BLAST of Spg003121 vs. NCBI nr
Match: KAA0059732.1 (Gag-pro-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 72.0 bits (175), Expect = 9.4e-09 Identity = 39/93 (41.94%), Postives = 61/93 (65.59%), Query Frame = 0
BLAST of Spg003121 vs. NCBI nr
Match: TYK10943.1 (glial fibrillary acidic protein-like [Cucumis melo var. makuwa]) HSP 1 Score: 68.9 bits (167), Expect = 8.0e-08 Identity = 45/133 (33.83%), Postives = 73/133 (54.89%), Query Frame = 0
BLAST of Spg003121 vs. NCBI nr
Match: EOY07994.1 (Uncharacterized protein TCM_022312 [Theobroma cacao]) HSP 1 Score: 63.9 bits (154), Expect = 2.6e-06 Identity = 55/186 (29.57%), Postives = 87/186 (46.77%), Query Frame = 0
BLAST of Spg003121 vs. ExPASy TrEMBL
Match: A0A5D3DEF4 (RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold318G00350 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.2e-09 Identity = 42/102 (41.18%), Postives = 64/102 (62.75%), Query Frame = 0
BLAST of Spg003121 vs. ExPASy TrEMBL
Match: A0A5A7T1W2 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00060 PE=4 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 3.5e-09 Identity = 42/126 (33.33%), Postives = 76/126 (60.32%), Query Frame = 0
BLAST of Spg003121 vs. ExPASy TrEMBL
Match: A0A5A7UUY2 (Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold551G00080 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 4.5e-09 Identity = 39/93 (41.94%), Postives = 61/93 (65.59%), Query Frame = 0
BLAST of Spg003121 vs. ExPASy TrEMBL
Match: A0A5D3CGB5 (Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold107G00250 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 3.9e-08 Identity = 45/133 (33.83%), Postives = 73/133 (54.89%), Query Frame = 0
BLAST of Spg003121 vs. ExPASy TrEMBL
Match: A0A061F0F4 (G-patch domain-containing protein OS=Theobroma cacao OX=3641 GN=TCM_022312 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.2e-06 Identity = 55/186 (29.57%), Postives = 87/186 (46.77%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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