Spg003009 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg003009
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold12: 37478770 .. 37481945 (-)
RNA-Seq Expression	Spg003009
Synteny	Spg003009

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTAATGGGTGATATTATTAAAAGTGAGCGCTTTAGTAAATAAAGTTGATAATGTTGTAATCGAGGTAATAACTTTGAGGAGAATATGATTTTGGCAACAAAGACGATGATTTAGAAGAAAGAGTTGATAGTGAGAATTATTTGTTTAATTAAGTTAGATTTGCCTTATTCAGACAAGCGTTCTCTAAATGTGTCTCTGATAGAGACACAACTTTACAACTTTAATACAACTTGTAAAGGATTGATTTTTTTGCCAACACATTTCAATTTCCAAAGGGAGTACGTCTCTTCGAATATGATTTGTTTTAATTAAACGAGTCACACACGATTCATCCGTTTCTACATTCTCTTTTCTTTCTCTTTTCCTTTTTTTATTGGTGTTTTTTTTCCTTTTCTTCACCTTGAATATCATCTCTAGTGGCTCCTCCTACATCTCAATTTATGCAACTTTCAATATAGATCTTGTTCTTCATTAATTTTTCTTTACTTTTATTTATTTTGTGTGGGATGATGACTTTATATTAAATAGGATTAAAGTTTCTTATGGATATCAAAATTGTTATAGGCAATTTTGGACCACCCGACGCACAAGGAGCTGACGAGGACGTCCGGGCGAAAATAGGGCTAGGAGACCGAGCCCGAGGAAGAACCGACCAAAGGGCCGGGCCAACTTGGCCCGACCCAAATGGTCGGCCTCGGCCCAAGGCCGAGGCCGACCATTCGGCCTGCTTGCGCGGGCCGAGCTCGGTCACCTCCTCTCGGTCCCTGATGCCTCTAGCCTCCCCGATTTCGCCTGGTTGGTCCCGAAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCACGAGCAGGTATTTATACCCCTCTTTGCCACTGAAGAAGGGGACCCGAACTCTATTCTCGACTCTCTTCCCTTGCTCTCTAGCTCTCCCTTCCGTTTTCTGACTTAAGCATCGGAGGCGGTGTGGATAGCACCACACCGGTGTGCAGGTTTTCTCTTTTGCAGGCCACGTCTCCCCCCTCATCTACAAATTTACCGTTGGTGGCACGTGAAGGTCAGGTGAGTTCCCTATGACCAAAATCGACCATCAACAAAAATTAATACAAAATTTATCAATGATTATGCGCTTATCTCTTATGTTTTTTTTTTCTTGAGTACATTTGAGGATACATGCCAATTACCGTTGAGCTAAGCTCGTTTTGGCCTTATCTCTTATGTTTTGATTCATATATATTTCTCCTACTTTATTTCATTCTATTTTCATTAATACAAAGATTAAGTTTGTACTATAATTATTATCCTCACAACTAAGACCCCATTTGATAACCATTTGGTTTTTTGAAAATTATGCTTGTTTTCTCTCAATTTTCCTACCATGGTTTTTATCTTTGTTAATGATACATTTGAATTCCTAGCCAAATTCCAAAAACAAAAACAAGTTTTTGAAAACTATTTTTTTTTTTTAGTTTTCAAAATTTGGCTTGGTTTTTAAAAACATGGAAATAATGTATTGGAAAAACAAAGAATGTAGGTGGAAGTAGTGTTTATAGACTTAATTTCCAAAAACCAAAAACCAAAAATCAAATGGTTATCAAACGGAGCTTAAATAAAATTGATTTTGTTTTGGTCCTTTTGCTCTATTTTAGTTTTAATTTGGTCATAATAAATAAACACGATTTCATCTTTACTTTTGAGATTCAAAATGGTAACGAGACCACTTATTTAATAAACTTTATTATACTAAAATGTTGTAAGCACAAAAAATCTCTTTAAAATTAAAAGTTAAAACTATCGAGATCTGCCCTCGTAAAAATTGTTTAGATTTTGGATTCAAAGATTGCCTCAAAATGATATAATTTAAAAATATTCTTTGGCCTACCTTAATTCAAGGGAAGCTTTTATTATTATTATTATGATTTTTTTTTTTTGGGGGGGGGGGGGGTATCAGGGAAGTTTTTTTTTTCAAAAATTAATTAATTAAGTTAGGTTTAGCTTAAAGAAACTAAATGATTATTGAAAATTCTCAATTTAGATCATTCCATAAAAAAATAGTTATAATTTGTTAAAAAAGACTGAATGTATCTTTATATGGTTGTTTTATTGATATATTTAGACATGTAAACTTGTTGGTTGAATGTGCTACTTAACACATGAAACTGAATCAACTCATAACAAAAATTATATTGACTCATAAACAAAATAAACAAATTCCATTCTTCTAAAGTGACATATCTATGTATCCAAGTATGTTAACAAAACAAAAATTTGATGACATACACACATCGGTTTTTTGTGTTAACACATTTTAACCAAATTTTTATCTAAGAGAACTTGACTGAGAATCCTTAATACACCACGGATAAAATTTAAGAATTTTAGAACAAACTAACAAAAATTTAGTATGTATGTTTATACATATATACACACTCAAAATAATAATAATAATAACTATGTTTTATTTCAAGTTTAGTCCCAGAATTTCTAAGATTGTATCAATTAAGTTTCTGAACTTTAAAAAGTTTCTAATATGTCTTTGAACTTTCAATTTTGTTTCTAATGTTGGGAGAAACAATGTGTGTGGAATACACAAACAATAATATAATATTATGACTGTAAAAATGACAAGTTATTTTAAGGTTAAATGATTAAAGGGCAATTTTGCAAATATTTCAATATAGAGGGGCAGTTTGGTAATTGAGCCTTCATCTTCTCTTCTTTAGGGCTCATTCACGATTCAATGAAAAAAAAAACAGAGAGAGAGAGCTTCAGCCGCACAGAACAGAAGGGAAGAAAAAGCAGCCGCCGGTCATCGTTCCTTGGCCGTTTTTTCGTGTGGGTATCATTCGGGTTGCTTCACGCTCACCTCAGAGACAATCTATTGTCGTTTCTCGGGTCTGGGTCTCGGTGTAGAGCAGCGTGGGCGGTTCAGCGTGGGTCTCGACTTCAGTCGTCGTGGATCTCGGCGTGGTTCTGTTTAGCACGTCGGTTTGGGTCTCTTCTCCGGCGTAGAGGCGTCGGTTTACTGCTGCAGTGTATTTCGGAGCAAGTGACAGCGTGGGTCTCGGTTTTAGAGACGTTTTTCGCCGGAGTGTTGTCGTGGGTACAGTTTCAGCAGAGGTACTACGGTTGGCGTGGGTCTGTCTTGTTCAGTAATGAGCCTCGGATTGGAGGTTGA

mRNA sequence

ATGGGCAATTTTGGACCACCCGACGCACAAGGAGCTGACGAGGACGTCCGGGCGAAAATAGGGCTAGGAGACCGAGCCCGAGGAAGAACCGACCAAAGGGCCGGGCCAACTTGGCCCGACCCAAATGGTCGGCCTCGGCCCAAGGCCGAGGCCGACCATTCGGCCTGCTTGCGCGGGCCGAGCTCGGTCACCTCCTCTCGGTCCCTGATGCCTCTAGCCTCCCCGATTTCGCCTGGTTGGTCCCGAAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCACGAGCAGCATCGGAGGCGGTGTGGATAGCACCACACCGGTGTGCAGGTTTTCTCTTTTGCAGGCCACGTCTCCCCCCTCATCTACAAATTTACCGTTGGTGGCACGTGAAGGGCTCATTCACGATTCAATGAAAAAAAAAACAGAGAGAGAGAGCTTCAGCCGCACAGAACAGAAGGGAAGAAAAAGCAGCCGCCGGTCATCGTTCCTTGGCCGTTTTTTCGTGTGGGTATCATTCGGGTTGCTTCACGCTCACCTCAGAGACAATCTATTGTCGTTTCTCGGGTCTGGGTCTCGGTGTAGAGCAGCGTGGGCGGTTCAGCGTGGGTCTCGACTTCAGTCGTCGTGGATCTCGGCGTGGTTCTGTTTAGCACGTCGGTTTGGGTCTCTTCTCCGGCGTAGAGGCGTCGGTTTACTGCTGCAGTGTATTTCGGAGCAAGTGACAGCGTGGGTCTCGGTTTTAGAGACGTTTTTCGCCGGAGTGTTGTCGTGGGTACAGTTTCAGCAGAGGTACTACGGTTGGCGTGGGTCTGTCTTGTTCAGTAATGAGCCTCGGATTGGAGGTTGA

Coding sequence (CDS)

ATGGGCAATTTTGGACCACCCGACGCACAAGGAGCTGACGAGGACGTCCGGGCGAAAATAGGGCTAGGAGACCGAGCCCGAGGAAGAACCGACCAAAGGGCCGGGCCAACTTGGCCCGACCCAAATGGTCGGCCTCGGCCCAAGGCCGAGGCCGACCATTCGGCCTGCTTGCGCGGGCCGAGCTCGGTCACCTCCTCTCGGTCCCTGATGCCTCTAGCCTCCCCGATTTCGCCTGGTTGGTCCCGAAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCACGAGCAGCATCGGAGGCGGTGTGGATAGCACCACACCGGTGTGCAGGTTTTCTCTTTTGCAGGCCACGTCTCCCCCCTCATCTACAAATTTACCGTTGGTGGCACGTGAAGGGCTCATTCACGATTCAATGAAAAAAAAAACAGAGAGAGAGAGCTTCAGCCGCACAGAACAGAAGGGAAGAAAAAGCAGCCGCCGGTCATCGTTCCTTGGCCGTTTTTTCGTGTGGGTATCATTCGGGTTGCTTCACGCTCACCTCAGAGACAATCTATTGTCGTTTCTCGGGTCTGGGTCTCGGTGTAGAGCAGCGTGGGCGGTTCAGCGTGGGTCTCGACTTCAGTCGTCGTGGATCTCGGCGTGGTTCTGTTTAGCACGTCGGTTTGGGTCTCTTCTCCGGCGTAGAGGCGTCGGTTTACTGCTGCAGTGTATTTCGGAGCAAGTGACAGCGTGGGTCTCGGTTTTAGAGACGTTTTTCGCCGGAGTGTTGTCGTGGGTACAGTTTCAGCAGAGGTACTACGGTTGGCGTGGGTCTGTCTTGTTCAGTAATGAGCCTCGGATTGGAGGTTGA

Protein sequence

MGNFGPPDAQGADEDVRAKIGLGDRARGRTDQRAGPTWPDPNGRPRPKAEADHSACLRGPSSVTSSRSLMPLASPISPGWSRKRLRIPKNPRSTSSIGGGVDSTTPVCRFSLLQATSPPSSTNLPLVAREGLIHDSMKKKTERESFSRTEQKGRKSSRRSSFLGRFFVWVSFGLLHAHLRDNLLSFLGSGSRCRAAWAVQRGSRLQSSWISAWFCLARRFGSLLRRRGVGLLLQCISEQVTAWVSVLETFFAGVLSWVQFQQRYYGWRGSVLFSNEPRIGG

Homology

The following BLAST results are available for this feature:

BLAST of Spg003009 vs.


Match Name	E-value	Identity	Description

BLAST of Spg003009 vs.


Match Name	E-value	Identity	Description

BLAST of Spg003009 vs.


Match Name	E-value	Identity	Description

BLAST of Spg003009 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg003009.1	Spg003009.1	mRNA