Spg002302 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg002302
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold1: 32550317 .. 32554626 (-)
RNA-Seq ExpressionSpg002302
SyntenySpg002302
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGTGAACCAACCCCCTCGTTTTCGCATGCATCGCTGCCTCCCTCTCCGTTCTCCTTCGTCGACGATGACCCACTCGACCCCTTGCGAGATCTCCGACCGTCCACCCCTCCTTCTTGGCCTCTTCCGTCGGTAGTAGCACTGCGATGGCCTCCCTTGCACTCTCTTCCTCTCTCTCTCACGTTTGTCTTTAGCAACCTTTGGAACTTTGAATTTTTCATTGATCATTTGTCCCAAATTATAAAATTTTTTCCTTAAAGACAAATTGGCATGCATGCACTAGTCATGAGAAGTAGGATCATTACAGATAGTATCATAGTAGAACCTCTCCTAGTAGGATGTGGTTCGAGGATGAACCAAGGTAGAAGTTGGTCGGCATGTATTGTCCAAATATAGGAGAGGTATATGAATGAGCTGAGACCAATCCGAATGAGAGGGATCCAGAGGATATGAAAGTATAGTCAAGGTAAGCTTAAAAAATTGAAAGTAACGATCTATATCAACAAGATGCACCTTCCTTTTTAGTACCTCAATCATAGGAACTTCAAAGTTAAGTGTCTTGACTTGTGGAATTTTCCTAGGAAGCATGTGAGTGAGGAAAAAACATAATATGAAACACAATAGTTAATGAAAAGAAAATACGCTTATGTTATATTTGAAAAAGAAAAAAAAAATTATATTACAAAAAAGTTAAAATTACAATTTTATTTGAGTTTGCTTTTCTTTATTCTTTTTTTTTTTTTTTCAACAACTTGTAGGAGGGAAGAATTCGAATCTTTGACCTCTTGATACTTTAGATAGTTAAGCTATATATGTTCGGATTGATAATTACAATTTTAGCTCCTAAACTTTTTAAAAAGTAAAAAGTGCTCTCTAGGTCTCTCAAGTTTAAATGTTGTGTCCATTAGGTCGAAGATTTTTATTAAAAAGTGGACAGTAGGTTCTTGAACTACTAGTTTTGTGTATACAAGTTCTTGAACTTAGCGTGCCTCATAGAGTATCAATGACCTAATATACACAAAATTGAAATTAAAGTTCAAGAACCTATATTAGACATAAAATTGAGAGTTCAATGACTTATTACATACTTTTAAAGTTTAAAAATTTATTAGACGTAACATTGAAAGTTTAGAGACCTATTAGTACTTATTAAAGTTCAATAACTTATTAAACATTGTTCTTAAAAGTTAGGCCGGTATCAAACTTGTAATTTATCTCTGTAAATATCTGATACATATAATAGTTATTGTGTTTTTTAGGAACATGAAATTGTGATGGTTATCGATCCTCATGAAGGGGTAAGATAAAAGAAAAGAATGAGGTGACTGATGATGAAAATACACAGACAAATGAGAGGGACAAAACCAAATGGTACAGGATCTGTATCAACATTTGGACAAGCTAAAGAAGAGGACATATATATTAGGTTAAAAATCACTTTTGGTCCCTGAACTTTCTTGAAAGTAACAATTTAGTCCATGAACATTGGTTTGTAACGATTTAGTCATTGGTATACTTTCAATATTATAACAATTTAATCCCTAAACTTTAATAAGTAACAATTTAAAGTCCTTGAACTTTCAAGTTTGTAACAAGTTAATCCTTGTGACAAAAAATTTCATCAAAATTAAAAGTCAATTTTTATTATTTAATGATTAAACTTTGTAGCTTATAAACATATTAGGTCCCAAATTAGTTTATTAATCTATCTATGCAAGAAATTTCATTTAATCTTCAAACTAAATCGTTACAAATTTTAAGTATAGGAACTAAATTGTTACATATGAAAGTTCAAAAACTAAATTGTTACACAATTGAAAGTATAGGAACTAAACTATTACAAATAATCAAAGTTCAATGACTAAATTGTTATTTTCATGAAAGTTCATAGACCAAAAGTGATTTTTAACCTATATTCGTTTGAAATACATTTTAATTTAAATGTTTTCAATAATGCATTTTTAGAAAAACATTTTGTATAAAAATTGTTTAGAATTTAAACACTCATATGTTTGGTTCCATTTCCTCATATGAGTTTTTATACACAAGTTATTGTATACTAAAGATTCTTTTTTAAAAAGTTGGTTTCGAGTGTTTCTCTTAAAATGATTTATTTATCAATCTCATTTTCTCATAAGTCATTTTTAGTGGTTGTCAAACACTAGAATTTTTTTCAAAATGATTTTTTTTTTTCAAAATTAAACACTTGAAAAGTTAAACTAAACATTATAACGTGACCGAACAGAAACCAACCATCGTACAGTTACAAAACAAGATAGAGAGAACCACAGATATCGATTGTGGTGCACAAGTGGAGAACTTTCACATCCATGGGTACTCTAACTTTCATGTGACTTTTAAAGATAGAGTCATGATTATTCGAATGTCCGCTTCTAACTTTCTTCATGAAAATAGGAGTTTGAGAGAATGAGAGTTGCACGAGAAGGAAGAGAAAGATATTTTGAGAGCGTAACTGTGCAGCTACTGACATAAATTTATATAGAGGGAGATTCAGCAATACAAAATGAAGCAATATGTTCCTAAGTAACATATACTTTGAAAAACCGGACTTGGATAATATTGTTTTTTGAATCAATCAATTAAGTTATACAAATATAATAAGGGTGTGTTTGGTTTAATTTTTCAAGTGTTTAATTTAAAAAAAAAAAAAATTCTAGTGTTTGACAACTATAAAAAATGACTCATTAAAAAATGAGATTGAGAAATAAATCATTTTGAGAGAAACACTTAAAGGCAAATTTTTAAAAAAGAGTTCTTAAGTATATAATAACTTGTGTATAAAAACACCTATGAGAAAACGTAACCATACATATGAGTGTTTAAATTCTAAACAATTTTTATACAAAATGTTTAACAGTAAATGCATTATTGAAAAACACTCAAATTAAAATGTATTCCAAAGGGACCCTAAGTTAAAGTTTGTACTTTTTAAATGGTAGTACTTTGTTACTGAAACCTAAGGTAGTTACAGATTTAGCATATACAATTTAGATAAATTATTGAAAGAAATAGCTTTATCATTGCAAATACAGTAAAGAAAAAAATCAAAATAGATAGATTAGGCCCCGTTTGATAATTATTTGCTTTTTTTTTTTTGTTTTTTAAAATTAAGCTTAAAAACACTACATGCACCTACAAGTTTCTTTGTTTTGTTATCTACCTCCTTCCCTTGTTTCAAAAAACCAAGTCAAATTTTGAAAACTAGAAAAAATAGTTTTCAAAAACATGTTTTTGTTTTTGGAATTTGGTTAGGAACTCAAGTGTGTCTTTAACAAGGATGAAAACCATTGTAAGGAAATTGGATGAAAACAAACATAATTTTCAAAAACCAAAAACCCAAAACCAAATGGTTATCAAACGGGACCTTAGTGATTTCATTATTCAATATATAGCTAATTGAATGATCGTTACATTTAGGTTAGGTTTGTTTCATTGGTTTTGAGATGAGATTTGGTAATGATAATAAAAATCCATGTTTGTTTCATTGATGTTTGCTTTTTTAAAACCAAGGTAACTATTATCCATGAATATTAATTAATGTTCCATGACCTATGAAATTTTATTATCCTCCTTGGAGATGAGATTTTTTTACTAGTGATTTTTTTCCTTAGAAAATGGAGATAGAGAGTGCATATAGAAGAGAGAAAATTAATCATTACTAGGGACTTATTTATTTAATATAAATGTTTTAATTAAATCTAATAATTGAAATTATTTTTTCCATCAACAAAACCAATAAAACAAACACATATATTCAACTCTCATATATTAATTATCCTACAATAACACTCATTTATGAGTGTTATTTGTTGGGAATGGCAAATAGTTTTTGTCCCACATCGAAAGCATAACTCTTGGGAAGTTGGTTTAAAAGCACTTATTGTGTATTGGGCTTATAAACTTGATGTGCGATAAACCAAGACCAAGGCCCACACGCGCGTCGTCGTCTGACCGGCTTTCCATTTTCCTTTCCTGAGCACGAAATTGATTTTACTCTGTCCCAACGAGTGCATGTCTGTTTCGAAATTCCAATTTTATCCTTCATTCTGGATAACAATTTGGAATCTCTCGATGGGACCAATTACCGTCGCTGGTTCCAAAAGCTTCTGATCTTCTTTGAGCAGTTGGAGGTCGACTATATTCTCACTACTGCTCAGCCCGTTGTTGTTGCCGCCACCAATCCACCTACTGCCGCTGCCATTGTCGTTCAGTCTGCCACCATCATTGCTGCTGGTGTAAGTTCGAAGAGGACAACAAAACTGTCCGGGGTCATCTTCTCAACCACATGA

mRNA sequence

ATGCGTGAACCAACCCCCTCGTTTTCGCATGCATCGCTGCCTCCCTCTCCGTTCTCCTTCGTCGACGATGACCCACTCGACCCCTTGCGAGATCTCCGACCGTCCACCCCTCCTTCTTGGCCTCTTCCGTCGGAACATGAAATTGTGATGGTTATCGATCCTCATGAAGGGTTGGAGGTCGACTATATTCTCACTACTGCTCAGCCCGTTGTTGTTGCCGCCACCAATCCACCTACTGCCGCTGCCATTGTCGTTCAGTCTGCCACCATCATTGCTGCTGGTGTAAGTTCGAAGAGGACAACAAAACTGTCCGGGGTCATCTTCTCAACCACATGA

Coding sequence (CDS)

ATGCGTGAACCAACCCCCTCGTTTTCGCATGCATCGCTGCCTCCCTCTCCGTTCTCCTTCGTCGACGATGACCCACTCGACCCCTTGCGAGATCTCCGACCGTCCACCCCTCCTTCTTGGCCTCTTCCGTCGGAACATGAAATTGTGATGGTTATCGATCCTCATGAAGGGTTGGAGGTCGACTATATTCTCACTACTGCTCAGCCCGTTGTTGTTGCCGCCACCAATCCACCTACTGCCGCTGCCATTGTCGTTCAGTCTGCCACCATCATTGCTGCTGGTGTAAGTTCGAAGAGGACAACAAAACTGTCCGGGGTCATCTTCTCAACCACATGA

Protein sequence

MREPTPSFSHASLPPSPFSFVDDDPLDPLRDLRPSTPPSWPLPSEHEIVMVIDPHEGLEVDYILTTAQPVVVAATNPPTAAAIVVQSATIIAAGVSSKRTTKLSGVIFSTT
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..40

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg002302.1Spg002302.1mRNA