Spg001981 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg001981
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold10: 1498414 .. 1503749 (+)
RNA-Seq ExpressionSpg001981
SyntenySpg001981
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CAACTCTCTGCAGCTGTTTCTTTATCCCAACATTTGGACAAATCCAAAACTCACATCACAAATTTCAGATTGAGAAATCCAAACAACAAAATATCTTAAACCCAAATCCAAAGCCATCAATTTCTCCTCTTCTCTCAGTCTCTCAATCTTCCACTCTGTACATTCATCCACCTCAAACCCTAAAACCATCCATTAATCTCAACCTTGTACTCCTCCCATGGAGCTTTGTCCTTTACTCGACACTTGTTGCTACTCTTCTTCTTCCTCCCACCGCCCCCTTCTTCTTTTTCCCAAAATTTCCCTTTCTGCGCGAACAATTCCCCGTTTTTCGCATTCTTTTCGCCCAATTCGCCGCCGGAATGTTTGTTCTGCTTCAAGCTCCGATACCCTTGTTGCCGGGTCGCGCAAGGAGGATGGGAAGAGTGGAGAAGCTGTAACCAAGAAGGGGGAGGACGAGTTTGGAGATTTGAAGGCTTGGATGCACAGGAATGGGCTTCCTCCCTGCAAGGTTGTTCTTGAGGAAAGGGCTTCGCATGATAGTAATCATAGGCCTATACATTATGTGGCTGCGAGTGAAGATCTTGAGGTGAATTTCTAAAGGTTTTTGTTTCTGGGTGTTTGTTTGGAAGTGTTTTTCGTTGTCGATTCGATGGATTTGTTGTGGAGCTTTTTGGGGTTGTTGATTTTTCAGGTGGGTGATGTCGCATTTTCGGTGCCGAATTCTTTGGTCGTGACGCTTGAGAGAGTACTGGGAAATGAGACTGTTGGTATGATTTCTTCTGTCGTGAAACATTTGAGTGATGGTGCTACTTCTCGCTGCTAATGAGGAAGTTTAGAAGTGGCTGCTGGAGAATAGCAAGTGAAATAAAATCTGTTTTATGATCTTGATATACTTGGTTTGTAGCTAGAAGCAATGTTGGAAGTGAAATGTTTATAGGTCTCACGTGGACTGAAAACCTGTTATGCTCTCTGTTTTTCTTTTTACTGTATAGATTAAGCATTTCTGCTCTCTTTTCAAGACTTCCTTCACGTTGCTTTCTTGGTCTAAAATATTGACTGCTGCAAGTGTTCTAGTCTATTGTCGTGGCATGGTTGTGGAAATTTTATATGCCCCATAATAATTGAATTTTACTGTGAATTTGAGAGCTACAAGACAATTTTGATTTAATAGTTTTATTTGTAATGGCTGTTTGGATTTTCTTGCAGCCGAATTGTTAACAACCAATAAGTTGTCAGAGTTGGCATGCTTGGCTTTGTATTTGATGTATGAGAAGAAACAAGGAAAGAAGTCTTTCTGGTACCCGTATATCAGAGAGCTTGATCGCCAGCGTGGGAGAGGCCAACTAGCCGTAGAGTCACCTCTTCTATGGTCAGAAGCTGAAATTGATTACCTTTCAGGCAGTCCAACAAAGGTAACAAGATTGACGTGCAACTTATTGCATGCCTCCTGGCTCCTTCACCTAATTACTCATTCCGAGTTGGAAATTTCCTGGCTAAAATTTGTTCTTGGATGGATCAGAACGAAGTTCTTGAAAGGGCGGAAGGAATCAAGAAGGAGTATAATGAACTCGATACTGTCTGGTTTATGGCTGGCTCTCTGTTTCAGGTAATGCCCCTTTGTACTTTGGACTATGGAGAACCATTAGATGATGGGAGAATAATCGCTTTTGTTGAGTCTTGCGGATGATTCTTTAAACTATTTTTTTATTTGGAAATTTGCAGCAATACCCATATGATATTCCAACTGAAGCATTTTCCTTTGAGATTTTCAAACAAGCCTTTGTTGCAGTTCAGTCATGTGTGGTACATTTGCAGGTAATTGACTCCCGTTTAGTTTCACTGTCCCTCTTCAGTCATGAGTGATTCTTTAACCTAATTGAGTGTTATGATTAATTAGATAAAGTGCTTCTGTGAGACAAAGGTTCATGTATTTCATTTGTTCATGGGCTGTAGAGTTGTTGTATGATATTCATATACATCCTAAAATTACCAATTTCTATTGGAAACATTAAAAATGATCAAGATAGAAATTTATTGCTTTCCTTCTTATAAGAAGGAAGAAAAAATTCCTGCTTTCTGTCCTTGCTTCATTGTCTGGAAATTTCATAAAGATATATACAAGCATTCATTACAAAGATTGCAGTGGCACTCACTTGTCAAATTACATCCTTCAATTCAAAATGAGAAGTCAAAATTCTTTTGTCATTTCTTTTCTGCAACAAGCATTTTCTTGATTCTGTCCTCTTCGCACAAAGTGCATGCATTTGTGACAATATTGCAGATGCACTCACTAGTCATTATGCCCTCCAACTTCAAATGAGAAGCGAAGATTCATATATTGTTTTTTTTGGAAATGTGTCCGTTCTTGATTCTATTCTCTTTGGTAAAAGGTGCATGTCTTTCTGGCAAGGCTAGTAGCTACATCACTGTCCCATAAGCTGTATCTGGTCTATGTCTTTTCTTCCAAATATTGTATCTCACTTCTATGATTTCCTATTTGTTTCCAGTAATTACAAGTTTTCTCTGCTTATAAATAAAGTAAGATTTTTTTTTTTTTTTTAATTATGCTTTTTGAAAGCTATACTCTTCTGAGTACGAAAGTTCACTTATTTTCTTCAGGAAACATTATTTTAAGATTTTCTCTGTTCTTAAGAGCTTCCAAATTGATTATCTAAAGGCTTATTGAATTCAGAAAGTAAGTTTGGCTCGGAGATTTGCATTGGTTCCTCTTGGCCCTCCACTGTTGGCTTATAGAAGCAATTGCAAGGCAATGTTAACTGCTGTTGATGGTGCTGTGGAACTAGTGGTTGATCGTCCATACAAAGCTGGGGAATCAATTGCTGTTTGGTAAGTTTGTTATGTGATTGAAACTGTGCGACTGTTCACAGGATTGCTTATTTGTGAATGTTTTTTGTTTGTGTAGCCTGTATTTTAATTACTTTAGCAAGATTTTCATTCTTGTTCAAAATCTTGAGAACAGGTGTGGGCCGCAGCCTAATTCTAAATTACTCCTGAATTATGGCTTTGTTGATGAAGATAACCGCAATGACCGCTTAGTAGTTGAGGTAAGGCTTTGTGTTTGATTGTGATTGATCTTTCGGATGAATCTCGCTTGATATTCTTGTCCTTATGTTTCAGGCAGCTTTGAATACCGAAGATCCTCAGTATCAAGATAAAAGAATGGTTGCTCAAAGAAATGGCAGATTATCAATACAAGTTTTTCAAGTACGAATCTAAAATACTGGCAGAAATGAAGGTTTTATAAGTTGTTGCTTTTCATGATATTTCATTTCTGATGCAGGTTTATGCTGGAAAGGAGAAAGAAGCTGTCTTAGACATGCTTCCTTATCTTCGGCTTGGCTATGTTACGGATCCTTCAGAAATGCAGTCTGTTATTTCTTCTCAAGGTCCAGTCTGTCCAGTAAGTTGTTATTGTCCCCGCTCTCTCCTTTGTTTGTTTAAGGCTTGGATGTTTAATAGAAATTGGAAAGTAAAAATTCTATAATTAGATTCTTTATCTAGATAACTACAAGCGTACAGGTTTTATTTATATATCTAAACTTATTTTTTCTATATCATGAATGTCTGGACCAACTTATGCACGCCTCAACTAATCTCACATGACCATTTTTGGACAGTGACTCTATAATATTTATTTTAGGTAGATGACTACCATGTAATTTGAATCATTCTCCTAAAATTCCTTTATTTTTTCACTTGCGTCGATGCCATTATGCCAACACATGGTGGTTAGCATAGGCTTAGCTACATCTCCAGATCATCAGATGTCCTATTTAAACTTGAAGGTTGACTTATTTCTCCAAGTTTGTATTCCCCTAACAAAGGATGTGAAACGTTTCTGGTTATTAATGTTGATGGCTAGATTCAGATAAGTAATGTGCTAAAACTTTCTGCACATGGAATGAATTTGAGAAGAAAAGATACAGGGGAGTATACTTGTTAGCTTGTGAACAAATCTAGGCCAATCCACCGATGTTGAAACATTTATTTGTAGGTGAGCCCCTGCATGGAACGAGCAATGTTGGATCAAGTTGCTGATTATTTCAAGAGACGCCTGGCCGGCTACCCAACTACCTTGAGTGAAGACGAGTCTCTGGTAAATTTTGCCTTCCGTGTATTCGATTTACCTATAATTCTTCATTTTAGCTTACCCCCATCTCTTCGATCAGTTGGCCGATGGTAATTTGAACCCGAAAAAGAGAGTCGCTACTCAGCTTGTTAGATTAGAAAAGAAAATCCTTCATTCATGCTTGCAAGTGACGATTGATTTCATAAATCAGTTACCGGATCACACCGTATCTCCATGCCCAGCTCCCTATGCCCCCTTGTTGAGATGAGTAAAGGTATGCACAATTTTGTTTATGGAGTTTCACATCATTGTCTTTGCACTGTTTTCATCATCTCTTTCCTTTCACTTGTAGTTGTAGATAATTCTTCCAGCAGCGGTCAACGTGTCTGTTTTATGATATTGCAAACCCGAACTGCTATGCAAAATCCTCCATTCCACGATGAAGCTGAAAATAAGGTCAGTTTGATGAAAACTCATTCATCTACTAAACTGTTTCTATTGCTGCAAAAGGATGATTTTATCATTTCTTGATAATTGGGGTTTGAGGGCTCCATGCTCGCTAGCGGTTTTGAGTTGTGTTTTCAACTCGAAATCTTGAAAGGTATCTCCATATATCTCAAGTCCTTACCACTAAAACTCGAGTAACTCGATGGTTGTATGATTGCGTATCCGTTGGTTCGAGTTGGAAAATTCTGAAAATGCTGCTTGTATGCTATGAACTGCTCGCCTCTTCTATCGAACCAGTTTCCGGGTTTTGATATTATGTTGTTATTTGGCAGGTAGATCTATGGTTTTTGCTGGTCTGGTATTGATGATGATGATGATGATAATCATAATGAGTTCAAAAAAAATTGGAGGCCATGGAGATTTCAAGTTATTACTGAGAGTAAAGGCTATATAACTCACTCCAACGCCCTGTAAATAACCAGAATTACTCCATCCTTCTTTCAATGTAATTCCCTCTTTTTCTTTTTCTCCATCTCTTCCTTTCATTTCTAATAGATTTCTTTGGTAGTCGGATTCTTGATTAAAACAGGTGTGTCGAGATGAAATCAGAATACTTGAAAGTTTAGGAATCAAAATGAATAAGAATGCTTGAAAGTTCAATAAGGACCATAGAAAAAATAAAGGGTTTAGAGGGAATGAGTTCAATCCATGATGGCCACCTACCTAGGATTTAATATCCTACGAGTTTCCTTGACAACCAAATGTAGTATTCAGGCGGTTGTTCCGTGAGATTAGTCAA

mRNA sequence

ATGCCCAGCTCCCTATGCCCCCTTGTTGAGATGAGTAAAGTTGTAGATAATTCTTCCAGCAGCGGTCAACGTGTCTGTTTTATGATATTGCAAACCCGAACTGCTATGCAAAATCCTCCATTCCACGATGAAGCTGAAAATAAGGTAGATCTATGGTTTTTGCTGGTCTGGCGGTTGTTCCGTGAGATTAGTCAA

Coding sequence (CDS)

ATGCCCAGCTCCCTATGCCCCCTTGTTGAGATGAGTAAAGTTGTAGATAATTCTTCCAGCAGCGGTCAACGTGTCTGTTTTATGATATTGCAAACCCGAACTGCTATGCAAAATCCTCCATTCCACGATGAAGCTGAAAATAAGGTAGATCTATGGTTTTTGCTGGTCTGGCGGTTGTTCCGTGAGATTAGTCAA

Protein sequence

MPSSLCPLVEMSKVVDNSSSSGQRVCFMILQTRTAMQNPPFHDEAENKVDLWFLLVWRLFREISQ
Homology
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BLAST of Spg001981 vs. NCBI nr
Match: KAG6588913.1 (Actin-histidine N-methyltransferase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 71.2 bits (173), Expect = 3.6e-09
Identity = 37/51 (72.55%), Postives = 40/51 (78.43%), Query Frame = 0 

Query: 1   MPSSLCPLVEMSKVVDNSSSSGQRVCFMILQTRTAMQNPPFHDEAENKVDL 52
           MPSSLCPLVE+  +VD+SSS   RVCF ILQ RTA QNPP  DEAE KVDL
Sbjct: 480 MPSSLCPLVEI--IVDSSSSKWSRVCFTILQHRTATQNPPSQDEAEIKVDL 528

The following BLAST results are available for this feature:
BLAST of Spg001981 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6588913.13.6e-0972.55Actin-histidine N-methyltransferase, partial [Cucurbita argyrosperma subsp. soro... [more]
BLAST of Spg001981 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg001981 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg001981 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg001981.1Spg001981.1mRNA