Spg001873 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTTTAAAAATATTTGATATAAATGTACATGTGTATGTATATATATTACATCATTACTATAAATATAAAAGAGAAACAAAAATGATAGCATATACTTATAAAGCTAAATCGTTTACTAACAACCATTTAATCTTATTTGGCTTCTCTATAAAACCCTAGCTACCCCCATTATATTATCTTATCAACTCTTCATCTCTCTCTCTCTCTTCCATCTTTCTCTCTCTCTCCTCTCCCATTTCTCTCTCGCTCTCTCCTTTCTCTTTCTCTTTGAGGAGATAGAAAAAAATGGATAAAAAACCATGCAACTCACCACAAGATGTGGAGGTTAGAAAAGGGCCATGGACTATGGAAGAAGATTTGATTCTCATCAACTACATAGCCAATCATGGTGAAGGTGTTTGGAATTCTCTTGCTAAATCTGCTGGTAATAATCAAAATCTCTCTCTCTCTCTCTCTCAAATTTTCTCAAAAACCCTAATTTTGATAGTTTTCCCTTTCTTCTCCCCCGAAACGGATCGTTCTAGGTCTGAAACGTACCGGGAAGAGCTGTCGACTCCGGTGGTTGAACTACCTCCGTCCCGACGTCCGACGAGGCAACATCACTCCAGAAGAACAACTACTGATCATGGAACTGCATGCGAAATGGGGAAACAAGTAAGTTTTATTTTTCGAACGAAATAGTATAACATAAAGCATAAATATATTTTTTCAAATTCAAATGACATAAAACATAATAAAGAAGCCAAAACGAGCATAGTTCAGTGGTAATTGACATATATCCTCGACCAAAAGGTCAGAGGTTCGAATTTGTACTATACTTATAAAGCCAAAACAAAATGTTATAACATTTTACCATGTTAAGATATCGAAAACCGAACGATTCTTACCGAGAAAGGAGATCGGTGACCGGCAGGCGGGCGAAATTGGACTGAGATTTTGGAGTCTCCTTTTAAAGGTTTCGTAGGAGAGAGATAGAGATTTGGCAAAGGAAGAATTCTTTGGGGCTTCCATGGCCACGAAAAAGATTTACAGCACGTTTGTTTTCAAATTCATGGCCACCAAATTTCTGATTTTCCACACGTTTATTTTCGAATTCATGGCCACCAAAATTCTGATTTACCCTCTTTTATATATATTTTAATTCTCTTTTTCTGCACGTTTTGATTGATTTTTTTAAATAATTTTCTAGCTTCTTCTACTTGAGAAAATTGAAAGAAAAAGAGAGAATTTTGCATGGGATGGATATAAATATGTCTGTGTTTTTTTCCTTCTATAAAATATGTACTTTTTCTTTTCCTAGTATGATTTATTTACAATTTTTTTTATTTGTTGATTATTTTTCTCGATTTTTCGATATTGTTCGTTAATTCTTTCGATTTTGGATTCTTAAAGTTTCAGTGTGTTAAAAAGAAATGAAAAAGAGATTATGAGTCTCTATTTGATACATTTCTTTTATCTCTTTAATTAAAAGATCAAGGTTTTCGAAAATCGTCTTGGTTTTAAAATCTACACAAAATATTTTCTAAAAGACTTGTTAGGTTTATTATTTTTTTTATAAAGATTTTAAGATTTTATTTTTAAAAAATGAAAGCCAATATAATAATACCTAAGGAGATTTCATTTTTAAAAGTAGAAATTAGAGAAAATAGTGATTGAATAAAGGTGGGGGAAAGAAGGGGATAATTGCTCCTCTTAGCCCATCCTAGTTTAAAATTTAATATATTAAGAAAGTCAAGAGGTTTTTTTCTTTTATTTTCCTCTCAAAATTAAAACGCTATATGAAATAATGAACTAGCATTTTTTAGTTCAACAATAATATGAGGGTGAAAGAATCAAACCTTTGAATTCTTCGTCAAGAATACAAACTTTATGTCAGTTGAGCTATGTTCATGTTGACAAATAATTGCATTATTAGAAAAATATTTTTTTAAAAAAGAGAAATTGAGTCATAAATTTATTTGAAAAAAAAGATGTGTTCTAAACTTCTAATTACAGCTGGTTGGGAATATAAGAAAAACCATGTGTTGTGAAAGGAGAGAGAAAGAGAAGACATTTTTGCAATAAAAGTTTTCCATTTTTAGCTAAACCCACAGCACTTAGCCACATGGATATTCCCTTTTTTGCATCAACCAAAAGAAAAAATAAAATTTAAAAAGACAATAATTTGAAAAACAAACAAACAGCCCCCATTTTCTTTGTCTTGATATTGACCCAAAACCCTTTTACCAAAAAAAATAAAAAACCAAAACTTTTTCTTTTTTAATTCTTTTGGCTCTACCCATTTATATGGCTAAAATTATAAATAATAAATCAATAGTAAAGAAAAAAAAATTATTACTCCTTTCTAACCTCATGCCTGTTTGATGAAAGATCAAAAGAATTCTCTAGAGATTGGTCCATCAACATTATTAATTATCTAACAGAAAAGCAAAAATTAAAAAAAAAAAACTATTTTATAAACAATTTTAGAAGCTAATTAATTGTATGTTTTGAAAATTGAAAAAAACAAAAAAAGTTGTGAGAAGGAAAAATTGGATATTTTTTTGGGGTGGCATTTGAAGAACTCTACCTGTGATTCAGCATTGTCTTCTCAAGTTGGAAACTTGAAACTGAATGATTTTTTTTTTTTTCCTTTTTTTGTTTGATTTTGTGAACTTTTTTTTTCCTTCTATGCTACAAATCCTTTAAAAAATTTGTGGATGTTTAGACTCCTTTAAATACAAGAAGTCCTATGTGGAAGAGCTTGCTTTTCAGCCATTGAACATGACCAATCAAATTTAACCCACAAATTTGTAACCCCCAAAAAAAAAAAATTGAAAAAGAATTTTTTTTTTCATGGCTCTAAATGCATTTCATTTTAGCTCAATTCAAACATGTGGTCTAAATATATTATTACACATTTTCTGATTTCTATCCATTCTTGTCTCTTGGTTGCTTATGATGATTGTTGTTGTTGTCATGCTAGTCTTTATCTTTATATGTTCATTTTTTTTATTTATTATTTTTATATTATCAATGACGGTTATTTCGAATTTTCTAAAAAAAAAATGACGGTTATTTCGAAAGTTTTTATTTTCTGTAGATTAGGGTTACAATGATATACTTTTTTTATAACATTTTTATTGTACATGTTTTGATGCATAATTAAGGAGTTGAATATTTTTCTATAAGGTATTGTTATGTTCTATATATATTTTACTATCGTTCTTCCCTCCCTCCACACATTTTCTTTGGATTTATCTCGAGGTTAATTAGGGTTTGCGATTATGTTTCATTATCTTCTCTTTTTTAACAATCTTATATTCTTTTCAATTGCTTTTAACATCTAACTAGTTAGAGACTATAAAACTTCATTTAAGCATAAGAAAAGAAACGAATGAACTCCTTTTTGTTCTGGTTGAATAAATGTAGGTGGTCGAAGATAGCAAAGCATCTTCCAGGAAGGACCGATAACGAGATAAAGAATTACTGGAGGACGAGAATCCAAAAGCACATAAAGCAAGCACATGGCTTCCACACTCCACAAAGTAGCACAAATGCAATATCTCATGATCAAATGAATGAACAAGCTGCAAGTTCAAGTAGCTGCCAAGTTTCTTACACAATGGATCCAATGGAAACCTATTCTCCTCCAACTTACACTCAAAATCTTGATGCTTTCTCAGTTCCTTTGCCCCCAACTGATAATTCCAATGACAATTATTGGAGCATGGAGGATCTCTGGTCTATGCAACTTCTCAATGCTGAATAAAAAAATTTAAAAATAAAAAAATAAAAAAAATTGGATGATATTTGAACCTAAAATATTTCATTATTTTGGTTCAATGTCATTAGGGTTGTCTATATTTTGGAAAAAAACATGTGTATTTTTCCATTTATATATATAATTAGACCAAAAGCATTTATGGCTTTGTGTTTAAAAATTTGCATATTCTCTCTTATATTTATATATATAGAGTGAAAAATGAGTTTCATTTTCCCCTTGATGTATATCTCCTTTTATCTTGACTTGTAATATTAGCTTTATTGTGTTAGCTTATTGTATATATATAGTGATGGTGTTTTAAT ATGGATAAAAAACCATGCAACTCACCACAAGATGTGGAGGTTAGAAAAGGGCCATGGACTATGGAAGAAGATTTGATTCTCATCAACTACATAGCCAATCATGGTGAAGGTGTTTGGAATTCTCTTGCTAAATCTGCTGGTCTGAAACGTACCGGGAAGAGCTGTCGACTCCGGTGGTTGAACTACCTCCGTCCCGACGTCCGACGAGGCAACATCACTCCAGAAGAACAACTACTGATCATGGAACTGCATGCGAAATGGGGAAACAAGTGGTCGAAGATAGCAAAGCATCTTCCAGGAAGGACCGATAACGAGATAAAGAATTACTGGAGGACGAGAATCCAAAAGCACATAAAGCAAGCACATGGCTTCCACACTCCACAAAGTAGCACAAATGCAATATCTCATGATCAAATGAATGAACAAGCTGCAAGTTCAAGTAGCTGCCAAGTTTCTTACACAATGGATCCAATGGAAACCTATTCTCCTCCAACTTACACTCAAAATCTTGATGCTTTCTCAGTTCCTTTGCCCCCAACTGATAATTCCAATGACAATTATTGGAGCATGGAGGATCTCTGGTCTATGCAACTTCTCAATGCTGAATAA ATGGATAAAAAACCATGCAACTCACCACAAGATGTGGAGGTTAGAAAAGGGCCATGGACTATGGAAGAAGATTTGATTCTCATCAACTACATAGCCAATCATGGTGAAGGTGTTTGGAATTCTCTTGCTAAATCTGCTGGTCTGAAACGTACCGGGAAGAGCTGTCGACTCCGGTGGTTGAACTACCTCCGTCCCGACGTCCGACGAGGCAACATCACTCCAGAAGAACAACTACTGATCATGGAACTGCATGCGAAATGGGGAAACAAGTGGTCGAAGATAGCAAAGCATCTTCCAGGAAGGACCGATAACGAGATAAAGAATTACTGGAGGACGAGAATCCAAAAGCACATAAAGCAAGCACATGGCTTCCACACTCCACAAAGTAGCACAAATGCAATATCTCATGATCAAATGAATGAACAAGCTGCAAGTTCAAGTAGCTGCCAAGTTTCTTACACAATGGATCCAATGGAAACCTATTCTCCTCCAACTTACACTCAAAATCTTGATGCTTTCTCAGTTCCTTTGCCCCCAACTGATAATTCCAATGACAATTATTGGAGCATGGAGGATCTCTGGTCTATGCAACTTCTCAATGCTGAATAA MDKKPCNSPQDVEVRKGPWTMEEDLILINYIANHGEGVWNSLAKSAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHAKWGNKWSKIAKHLPGRTDNEIKNYWRTRIQKHIKQAHGFHTPQSSTNAISHDQMNEQAASSSSCQVSYTMDPMETYSPPTYTQNLDAFSVPLPPTDNSNDNYWSMEDLWSMQLLNAE Homology
BLAST of Spg001873 vs. NCBI nr
Match: XP_004141095.1 (myb-related protein 305 [Cucumis sativus] >KAE8651255.1 hypothetical protein Csa_000982 [Cucumis sativus]) HSP 1 Score: 389.8 bits (1000), Expect = 1.4e-104 Identity = 191/217 (88.02%), Postives = 197/217 (90.78%), Query Frame = 0
BLAST of Spg001873 vs. NCBI nr
Match: XP_022983180.1 (myb-related protein 305-like [Cucurbita maxima]) HSP 1 Score: 389.8 bits (1000), Expect = 1.4e-104 Identity = 186/203 (91.63%), Postives = 194/203 (95.57%), Query Frame = 0
BLAST of Spg001873 vs. NCBI nr
Match: XP_038903806.1 (MYB-like transcription factor EOBII [Benincasa hispida]) HSP 1 Score: 389.4 bits (999), Expect = 1.9e-104 Identity = 187/209 (89.47%), Postives = 195/209 (93.30%), Query Frame = 0
BLAST of Spg001873 vs. NCBI nr
Match: XP_022934871.1 (myb-related protein 305-like [Cucurbita moschata] >XP_023528397.1 myb-related protein 305-like isoform X2 [Cucurbita pepo subsp. pepo] >KAG6581038.1 Myb-related protein 305, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017768.1 Myb-related protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 388.3 bits (996), Expect = 4.1e-104 Identity = 185/203 (91.13%), Postives = 193/203 (95.07%), Query Frame = 0
BLAST of Spg001873 vs. NCBI nr
Match: XP_008443525.1 (PREDICTED: myb-related protein 305 [Cucumis melo]) HSP 1 Score: 385.2 bits (988), Expect = 3.5e-103 Identity = 191/218 (87.61%), Postives = 197/218 (90.37%), Query Frame = 0
BLAST of Spg001873 vs. ExPASy Swiss-Prot
Match: P81391 (Myb-related protein 305 OS=Antirrhinum majus OX=4151 GN=MYB305 PE=2 SV=1) HSP 1 Score: 295.0 bits (754), Expect = 6.3e-79 Identity = 153/212 (72.17%), Postives = 168/212 (79.25%), Query Frame = 0
BLAST of Spg001873 vs. ExPASy Swiss-Prot
Match: E0CJS3 (MYB-like transcription factor EOBII OS=Petunia hybrida OX=4102 GN=EOBII PE=2 SV=1) HSP 1 Score: 292.0 bits (746), Expect = 5.3e-78 Identity = 146/202 (72.28%), Postives = 161/202 (79.70%), Query Frame = 0
BLAST of Spg001873 vs. ExPASy Swiss-Prot
Match: L7R9Z0 (MYB-like transcription factor EOBI OS=Petunia hybrida OX=4102 GN=EOBI PE=2 SV=1) HSP 1 Score: 283.9 bits (725), Expect = 1.4e-75 Identity = 145/206 (70.39%), Postives = 162/206 (78.64%), Query Frame = 0
BLAST of Spg001873 vs. ExPASy Swiss-Prot
Match: P81396 (Myb-related protein 340 OS=Antirrhinum majus OX=4151 GN=MYB340 PE=2 SV=1) HSP 1 Score: 271.2 bits (692), Expect = 9.7e-72 Identity = 146/207 (70.53%), Postives = 165/207 (79.71%), Query Frame = 0
BLAST of Spg001873 vs. ExPASy Swiss-Prot
Match: Q9LK95 (Transcription factor MYB21 OS=Arabidopsis thaliana OX=3702 GN=MYB21 PE=1 SV=1) HSP 1 Score: 266.2 bits (679), Expect = 3.1e-70 Identity = 140/213 (65.73%), Postives = 160/213 (75.12%), Query Frame = 0
BLAST of Spg001873 vs. ExPASy TrEMBL
Match: A0A6J1J524 (myb-related protein 305-like OS=Cucurbita maxima OX=3661 GN=LOC111481836 PE=4 SV=1) HSP 1 Score: 389.8 bits (1000), Expect = 6.9e-105 Identity = 186/203 (91.63%), Postives = 194/203 (95.57%), Query Frame = 0
BLAST of Spg001873 vs. ExPASy TrEMBL
Match: A0A6J1F320 (myb-related protein 305-like OS=Cucurbita moschata OX=3662 GN=LOC111441911 PE=4 SV=1) HSP 1 Score: 388.3 bits (996), Expect = 2.0e-104 Identity = 185/203 (91.13%), Postives = 193/203 (95.07%), Query Frame = 0
BLAST of Spg001873 vs. ExPASy TrEMBL
Match: A0A1S3B886 (myb-related protein 305 OS=Cucumis melo OX=3656 GN=LOC103487095 PE=4 SV=1) HSP 1 Score: 385.2 bits (988), Expect = 1.7e-103 Identity = 191/218 (87.61%), Postives = 197/218 (90.37%), Query Frame = 0
BLAST of Spg001873 vs. ExPASy TrEMBL
Match: A0A6J1DFI0 (myb-related protein 305-like OS=Momordica charantia OX=3673 GN=LOC111019967 PE=4 SV=1) HSP 1 Score: 375.2 bits (962), Expect = 1.8e-100 Identity = 179/202 (88.61%), Postives = 187/202 (92.57%), Query Frame = 0
BLAST of Spg001873 vs. ExPASy TrEMBL
Match: A0A6J1ENE2 (myb-related protein 305-like OS=Cucurbita moschata OX=3662 GN=LOC111435123 PE=4 SV=1) HSP 1 Score: 315.8 bits (808), Expect = 1.3e-82 Identity = 155/192 (80.73%), Postives = 167/192 (86.98%), Query Frame = 0
BLAST of Spg001873 vs. TAIR 10
Match: AT3G27810.1 (myb domain protein 21 ) HSP 1 Score: 266.2 bits (679), Expect = 2.2e-71 Identity = 140/213 (65.73%), Postives = 160/213 (75.12%), Query Frame = 0
BLAST of Spg001873 vs. TAIR 10
Match: AT5G40350.1 (myb domain protein 24 ) HSP 1 Score: 246.1 bits (627), Expect = 2.4e-65 Identity = 127/206 (61.65%), Postives = 148/206 (71.84%), Query Frame = 0
BLAST of Spg001873 vs. TAIR 10
Match: AT3G01530.1 (myb domain protein 57 ) HSP 1 Score: 222.6 bits (566), Expect = 2.8e-58 Identity = 112/193 (58.03%), Postives = 139/193 (72.02%), Query Frame = 0
BLAST of Spg001873 vs. TAIR 10
Match: AT5G49620.1 (myb domain protein 78 ) HSP 1 Score: 204.9 bits (520), Expect = 6.0e-53 Identity = 90/111 (81.08%), Postives = 104/111 (93.69%), Query Frame = 0
BLAST of Spg001873 vs. TAIR 10
Match: AT1G68320.1 (myb domain protein 62 ) HSP 1 Score: 199.9 bits (507), Expect = 1.9e-51 Identity = 85/118 (72.03%), Postives = 104/118 (88.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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